Metagenome / Metatranscriptome Family F101750

Basic Information
Family ID	F101750
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	91 residues
Representative Sequence	MPMILLSKGAEILLVQFHEKKGDRVGARVGDRLPESAFMEAAAESPGVDFDGATQALLEGSLVRQEDGEFILTQEGYDYLYKRTGHRVGEG
Number of Associated Samples	76
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	76.47 %
% of genes near scaffold ends (potentially truncated)	24.51 %
% of genes from short scaffolds (< 2000 bps)	74.51 %
Associated GOLD sequencing projects	67
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.71

Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere (8.823 % of family members)
Environment Ontology (ENVO)	Unclassified (23.529 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (48.039 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 32.77% β-sheet: 9.24% Coil/Unstructured: 57.98%
Feature Viewer

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SCOP family	SCOP domain	Representative PDB	TM-score
e.10.1.1: Prokaryotic type I DNA topoisomerase	d1i7da_	1i7d	0.73086
a.4.5.28: MarR-like transcriptional regulators	d1z91a1	1z91	0.72223
e.10.1.1: Prokaryotic type I DNA topoisomerase	d1gkub3	1gku	0.72175
a.4.5.28: MarR-like transcriptional regulators	d2fbia1	2fbi	0.71746
a.4.5.0: automated matches	d6pcoa_	6pco	0.7174

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF01253	SUI1	35.29
PF07883	Cupin_2	16.67
PF13302	Acetyltransf_3	4.90
PF00009	GTP_EFTU	4.90
PF05016	ParE_toxin	1.96
PF00583	Acetyltransf_1	1.96
PF03144	GTP_EFTU_D2	0.98
PF13411	MerR_1	0.98
PF00326	Peptidase_S9	0.98
PF02559	CarD_CdnL_TRCF	0.98
PF13167	GTP-bdg_N	0.98
PF06969	HemN_C	0.98
PF09720	Unstab_antitox	0.98
PF00005	ABC_tran	0.98
PF03551	PadR	0.98
PF14492	EFG_III	0.98
PF04101	Glyco_tran_28_C	0.98
PF13432	TPR_16	0.98
PF13421	Band_7_1	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0023	Translation initiation factor 1 (eIF-1/SUI1)	Translation, ribosomal structure and biogenesis [J]	35.29
COG0635	Coproporphyrinogen-III oxidase HemN (oxygen-independent) or related Fe-S oxidoreductase	Coenzyme transport and metabolism [H]	0.98
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.98
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.98
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.98

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	37.25 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	16.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.86 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.98 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	30.39 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	16.67 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.96 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.98 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	30.39 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	16.67 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.96 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.98 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001686\|C688J18823_10263682	All Organisms → cellular organisms → Bacteria	1141	Open in IMG/M
3300002568\|C688J35102_117999652	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300002568\|C688J35102_118549460	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300002568\|C688J35102_119427899	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	693	Open in IMG/M
3300002568\|C688J35102_119475430	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	702	Open in IMG/M
3300003316\|rootH1_10083158	All Organisms → cellular organisms → Bacteria → Proteobacteria	4769	Open in IMG/M
3300003319\|soilL2_10153541	All Organisms → cellular organisms → Bacteria	1768	Open in IMG/M
3300003324\|soilH2_10050016	All Organisms → cellular organisms → Bacteria	2169	Open in IMG/M
3300003693\|Ga0032354_1095384	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	741	Open in IMG/M
3300004153\|Ga0063455_100299517	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300004153\|Ga0063455_101082637	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300004463\|Ga0063356_101964652	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	884	Open in IMG/M
3300004801\|Ga0058860_10029507	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	659	Open in IMG/M
3300005335\|Ga0070666_10008985	All Organisms → cellular organisms → Bacteria → Proteobacteria	6221	Open in IMG/M
3300005336\|Ga0070680_101366962	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	613	Open in IMG/M
3300005337\|Ga0070682_100768436	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	780	Open in IMG/M
3300005337\|Ga0070682_101934353	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300005340\|Ga0070689_100638195	All Organisms → cellular organisms → Bacteria → Acidobacteria	925	Open in IMG/M
3300005343\|Ga0070687_100214391	All Organisms → cellular organisms → Bacteria	1175	Open in IMG/M
3300005343\|Ga0070687_101547337	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300005347\|Ga0070668_100317557	All Organisms → cellular organisms → Bacteria	1310	Open in IMG/M
3300005353\|Ga0070669_100000063	All Organisms → cellular organisms → Bacteria	107421	Open in IMG/M
3300005364\|Ga0070673_100696041	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	933	Open in IMG/M
3300005365\|Ga0070688_100141861	All Organisms → cellular organisms → Bacteria	1633	Open in IMG/M
3300005466\|Ga0070685_10034241	All Organisms → cellular organisms → Bacteria	2860	Open in IMG/M
3300005466\|Ga0070685_11399266	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300005534\|Ga0070735_10212379	All Organisms → cellular organisms → Bacteria	1181	Open in IMG/M
3300005578\|Ga0068854_100451924	All Organisms → cellular organisms → Bacteria	1073	Open in IMG/M
3300005587\|Ga0066654_10019086	All Organisms → cellular organisms → Bacteria	2715	Open in IMG/M
3300005587\|Ga0066654_10852045	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300005616\|Ga0068852_100772869	All Organisms → cellular organisms → Bacteria → Acidobacteria	974	Open in IMG/M
3300006034\|Ga0066656_10092246	All Organisms → cellular organisms → Bacteria	1826	Open in IMG/M
3300006173\|Ga0070716_100492809	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	902	Open in IMG/M
3300006794\|Ga0066658_10311158	All Organisms → cellular organisms → Bacteria	841	Open in IMG/M
3300006881\|Ga0068865_100812984	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	807	Open in IMG/M
3300006954\|Ga0079219_11484524	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	612	Open in IMG/M
3300009840\|Ga0126313_10248777	All Organisms → cellular organisms → Bacteria	1378	Open in IMG/M
3300010036\|Ga0126305_10002188	All Organisms → cellular organisms → Bacteria	8859	Open in IMG/M
3300010038\|Ga0126315_10661398	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	679	Open in IMG/M
3300010040\|Ga0126308_10413409	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	901	Open in IMG/M
3300010042\|Ga0126314_10438304	All Organisms → cellular organisms → Bacteria	944	Open in IMG/M
3300010397\|Ga0134124_10344876	All Organisms → cellular organisms → Bacteria	1402	Open in IMG/M
3300010399\|Ga0134127_10619701	All Organisms → cellular organisms → Bacteria	1113	Open in IMG/M
3300012088\|Ga0153944_1092549	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300012212\|Ga0150985_100464019	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	736	Open in IMG/M
3300012212\|Ga0150985_106344930	All Organisms → cellular organisms → Bacteria	865	Open in IMG/M
3300012212\|Ga0150985_114618367	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300012469\|Ga0150984_103018532	All Organisms → cellular organisms → Bacteria	1084	Open in IMG/M
3300012469\|Ga0150984_105108482	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	635	Open in IMG/M
3300012469\|Ga0150984_109991153	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	617	Open in IMG/M
3300012469\|Ga0150984_111306151	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300012469\|Ga0150984_112467820	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	758	Open in IMG/M
3300012469\|Ga0150984_112925875	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	624	Open in IMG/M
3300012469\|Ga0150984_120252188	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300012668\|Ga0157216_10299087	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	738	Open in IMG/M
3300012986\|Ga0164304_10003583	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	5966	Open in IMG/M
3300013308\|Ga0157375_10288721	All Organisms → cellular organisms → Bacteria	1803	Open in IMG/M
3300015158\|Ga0167622_1002139	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	7432	Open in IMG/M
3300018422\|Ga0190265_10010251	All Organisms → cellular organisms → Bacteria → Acidobacteria	6997	Open in IMG/M
3300018431\|Ga0066655_10041339	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2322	Open in IMG/M
3300018431\|Ga0066655_10251569	All Organisms → cellular organisms → Bacteria	1128	Open in IMG/M
3300018431\|Ga0066655_10612149	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	735	Open in IMG/M
3300018465\|Ga0190269_11498022	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	555	Open in IMG/M
3300018465\|Ga0190269_11837443	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300018466\|Ga0190268_10473152	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300018468\|Ga0066662_10003398	All Organisms → cellular organisms → Bacteria → Acidobacteria	7651	Open in IMG/M
3300018476\|Ga0190274_11291061	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	816	Open in IMG/M
3300018920\|Ga0190273_10121636	All Organisms → cellular organisms → Bacteria	1505	Open in IMG/M
3300021339\|Ga0193706_1000048	All Organisms → cellular organisms → Bacteria	113259	Open in IMG/M
3300022878\|Ga0247761_1006967	All Organisms → cellular organisms → Bacteria	1876	Open in IMG/M
3300023268\|Ga0247765_1001443	All Organisms → cellular organisms → Bacteria	11264	Open in IMG/M
3300025903\|Ga0207680_10949044	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	616	Open in IMG/M
3300025903\|Ga0207680_11052599	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300025909\|Ga0207705_10034538	All Organisms → cellular organisms → Bacteria	3616	Open in IMG/M
3300025917\|Ga0207660_11215465	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	613	Open in IMG/M
3300025918\|Ga0207662_11217844	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300025918\|Ga0207662_11357492	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300025923\|Ga0207681_10000015	All Organisms → cellular organisms → Bacteria	352892	Open in IMG/M
3300025934\|Ga0207686_10430634	All Organisms → cellular organisms → Bacteria → Acidobacteria	1011	Open in IMG/M
3300025960\|Ga0207651_12148283	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300026118\|Ga0207675_100508521	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1200	Open in IMG/M
3300026308\|Ga0209265_1010676	All Organisms → cellular organisms → Bacteria	2857	Open in IMG/M
3300026308\|Ga0209265_1026386	All Organisms → cellular organisms → Bacteria → Acidobacteria	1799	Open in IMG/M
3300026325\|Ga0209152_10083441	All Organisms → cellular organisms → Bacteria	1180	Open in IMG/M
3300026325\|Ga0209152_10101705	All Organisms → cellular organisms → Bacteria	1083	Open in IMG/M
3300027524\|Ga0208998_1002492	All Organisms → cellular organisms → Bacteria	2668	Open in IMG/M
3300027695\|Ga0209966_1075990	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	740	Open in IMG/M
3300027986\|Ga0209168_10146336	All Organisms → cellular organisms → Bacteria	1199	Open in IMG/M
3300028379\|Ga0268266_10002429	All Organisms → cellular organisms → Bacteria → Proteobacteria	20038	Open in IMG/M
3300030858\|Ga0102759_1949293	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300030989\|Ga0308196_1068173	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300031481\|Ga0314816_1058809	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300031938\|Ga0308175_100030930	All Organisms → cellular organisms → Bacteria → Proteobacteria	4424	Open in IMG/M
3300031938\|Ga0308175_100073626	All Organisms → cellular organisms → Bacteria → Acidobacteria	3053	Open in IMG/M
3300031996\|Ga0308176_10014075	All Organisms → cellular organisms → Bacteria → Proteobacteria	5749	Open in IMG/M
3300032002\|Ga0307416_102157258	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	659	Open in IMG/M
3300034172\|Ga0334913_000386	All Organisms → cellular organisms → Bacteria	24206	Open in IMG/M
3300034268\|Ga0372943_0000797	All Organisms → cellular organisms → Bacteria	14388	Open in IMG/M
3300034268\|Ga0372943_0814610	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	619	Open in IMG/M
3300034268\|Ga0372943_0975697	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	564	Open in IMG/M
3300034281\|Ga0370481_0005726	All Organisms → cellular organisms → Bacteria	3264	Open in IMG/M
3300034402\|Ga0334960_000061	All Organisms → cellular organisms → Bacteria	54130	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	67.65%
Host-Associated	Host-Associated	32.35%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.67%
Plants	Host-Associated → Plants	30.39%
Aquatic	Environmental → Aquatic	0.98%
Human	Host-Associated → Human	0.98%
Fungi	Host-Associated → Fungi	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	64.71%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.59%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.82%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.96%
Freshwater	Environmental → Aquatic → Freshwater	0.98%
Digestive System	Host-Associated → Human → Digestive System	0.98%
Rhizome	Host-Associated → Plants → Rhizome	0.98%
Mycelium	Host-Associated → Fungi → Mycelium	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.14%
Loam	Environmental → Terrestrial → Soil → Loam	20.59%
Soil	Host-Associated → Plants → Rhizosphere → Soil	17.65%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.94%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.96%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.98%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.98%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.98%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified	0.98%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	17.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.75%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.76%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	6.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.92%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.94%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.94%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	1.96%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.96%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.98%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.98%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.98%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.98%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified → Unclassified	0.98%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	8.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.84%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	7.84%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	7.84%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	6.86%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	4.90%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.92%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.94%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	2.94%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.96%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.96%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.96%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.96%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	1.96%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	1.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.96%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.96%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.98%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.98%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.98%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.98%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.98%
Sugarcane Root And Bulk Soil	Host-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil	0.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.98%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003316	Sugarcane root Sample L1	Host-Associated	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300003693	Avena fatua rhizosphere microbial communities - H2_Rhizo_Litter_49 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004801	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300012088	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ028 MetaG	Host-Associated	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012668	Arctic soils microbial communities. Combined Assembly of 23 SPs	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300015158	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G1A, Ice margin)	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300021339	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c1	Environmental	Open in IMG/M
3300022878	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L111-311C-4	Environmental	Open in IMG/M
3300023268	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L106-311C-6	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300027524	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027695	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes)	Host-Associated	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300030858	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 6B (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030989	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_197 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031481	Metatranscriptome of soil surface biofilm microbial communities from soil inoculated with nitrogen-fixing consortium DG1, State College, Pennsylvania, United States - MICR_N_R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300034172	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 9HMS	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M
3300034281	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_03D_15	Environmental	Open in IMG/M
3300034402	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 56SNS	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J18823_102636822	3300001686	Soil	MPVTLLSKGAEILLVQFHEQKGDRVGAQVGDRLPEQAFMEAAAESPGVDFDGATRNLLEGNLIRQEDGDFILAQEGYDYLYKRTGHRVGEG*
C688J35102_1179996522	3300002568	Soil	MPMILLSKGAEILLVQFHEQKGDRVGAKVGDRLPEQAFTEAAAESPGVDFEGATQTLLEGSLIRQEDGEFILTQEGYDYLYKRTGHRVGEG*
C688J35102_1185494602	3300002568	Soil	MPVTLLSKGAEILLVQFHEPKGDRVGAQVGDRLPEQAFTEAAAESPGVDFDGATQTLLDGSLVRQEDGEFILTQEGYDYLYKRTGHRVGEG*
C688J35102_1194278991	3300002568	Soil	MPMILLSKGAEILLVQFHEKKGDRVGARVGDRLPESAFMEAAAESPGVDFDGATQALLEGSLVRQEDGEFILTQEGYDYLYKRTGHRVGEG*
C688J35102_1194754302	3300002568	Soil	MPVTLLSKGAEILLVQFHETKGDRVGAKVGDRLPESAFMEAAAESPGVDFDGATQTLLDGGLIRQEDGEFILTQEGYDYLYKRTGHRVGEG*
rootH1_100831586	3300003316	Sugarcane Root And Bulk Soil	MPVTLMSKGAEILLVQFHEQKGDRVGAQVGDRLPEQAFTEAAAESPGVDFDGATQSLLDGSLIRQEDGEFILTQEGYDYLYKRMGHRMGEG*
soilL2_101535413	3300003319	Sugarcane Root And Bulk Soil	MPITLLSKGAEILLVQFHEQKGDREGARVGDRLPQSAFEEAAAISPGVDFEGAMQSLLEGNLVQKDGEEYVFNQEGYDYLYKRAGHRVGEG*
soilH2_100500162	3300003324	Sugarcane Root And Bulk Soil	MPMTLLSKGAEILLVQYHEKKGDRVGASEGDRLPQRAFEEAAAESPGVDFEGAMQSLLEGNLVRQEGEEYVLTQEGYDYLYKRTGHRVGEG*
Ga0032354_10953841	3300003693	Avena Fatua Rhizosphere	MPMILLSKGAEILLVQFHEKKGDRVGAQVGDRLPEQAFMEAAAESPGVDFDGATQTLLEGNLIRQEDGNFVLTQEGYDYLYKRTGHRVGEG*
Ga0063455_1002995172	3300004153	Soil	MPVTLLSKGAEILLVQFHEMKGDRVGAQVGDRLPEQAFMEAAAESPGVDFDGATQALLEGNLIRQEDGSFILTQEGYDYLYKRTGHRVGEG*
Ga0063455_1010826371	3300004153	Soil	MPVTLLSKGAEILLVQFHEQKGDRVGAQVGDRLPEQAFMEAAAESPGVDFDGATRNLLEGNLIRQEDGDFILAQEGYDYLYKRTGHRVGE
Ga0063356_1019646521	3300004463	Arabidopsis Thaliana Rhizosphere	MPMILLSKGAEIFLMQFHERKGDRIGARPDDRLSEDDFRKVGAESPGVDFEGAMESLLEGNLVRKEGEDYLLTQEGYNYLYKRTGHRVGEG*
Ga0058860_100295072	3300004801	Host-Associated	LLSKGAEILLVQFHEQKGDREGAKVGDRLPQSAFEEAAAISPGVDFEGAMQSLLDGGLVQKDGEEYVFTQEGYDYFYKTGGGHRVGEG*
Ga0070666_100089852	3300005335	Switchgrass Rhizosphere	MAITLLSKGAEILLVQFHEQKGDRVGARPDERVPQAVFEKAAAESPGVDFDGATQSLLDGNLIRQEGEEFVLTQEGYDYLYKNAGHRVGEG*
Ga0070680_1013669622	3300005336	Corn Rhizosphere	MAITLLSKGAEILLVQFHELKGDRVGARPGERVHQEVFEKAAAESPGVDFDGATQSLMDGNLVQKEGEEFVLTQDGYDYLYKNKGHRVGEG*
Ga0070682_1007684362	3300005337	Corn Rhizosphere	MPMILLSKGAEILLVQFHERKGDRVGAKAGERLPESAFTEAAAESPGVDFDGATQSLLDGDLIRQEDGEFILTQEGYDYLYTRSGHRVGEG*
Ga0070682_1019343531	3300005337	Corn Rhizosphere	MPMILLSKGAEILLLRFHEKNGDRVGAHPGDRLPQQLFEEAAAESPGVDFDGSMQSLLEGNLIRQEGEDFILTQEGYDYLYKRTGHRMGES*
Ga0070689_1006381951	3300005340	Switchgrass Rhizosphere	MPMILLSKGAEILLVQFHEPKGDRVGAKAGERLPESAFMEAAAESPGVDFDGATQSLLDGGLIGHEDGEFILTQEGYDYLY
Ga0070687_1002143913	3300005343	Switchgrass Rhizosphere	SKGAEILLVQFHEQKGDRVGAQVGDRLPEQAFMEAAAESPGVDFDGATRSLLDGSLIRQEDGDFILAQGGYDYLYKRTGHRMGEG*
Ga0070687_1015473372	3300005343	Switchgrass Rhizosphere	TTTMPMILLSKGAEILLVQFHERKGDRVGAKAGERLPEDAFTEAAAESPGVDFDGATQSLLDGGLIRQEDGEFILTQEGYDYLYTRSGHRMGEG*
Ga0070668_1003175572	3300005347	Switchgrass Rhizosphere	MPMILLSKGAEILLVQFHEPKGDRVGAKAGERLPESAFMEAAAESPGVDFDGATQSLLDGGLIGQEDGEFILTQEGYDYLYTRSGHRMGEG*
Ga0070669_10000006316	3300005353	Switchgrass Rhizosphere	MPMILLSKGAEILLVQFHEQKGDREGAHVGDRLPQSAFEEAAAKSPGVDFEGAMQSLLDGNLLQKEGDEYVFSQEGYDYFYRGGGHRVGEG*
Ga0070673_1006960412	3300005364	Switchgrass Rhizosphere	MPTTLLSKGAEILLVQFHEQKGDREGARVGDRLPQSAFEEAAAISPGVDFEGAMQSLLDGGLVQKDGEEYVFSQEGYDYFYKRTGHRVGEG*
Ga0070688_1001418611	3300005365	Switchgrass Rhizosphere	MPMILLSKGAEILLVQFHEPKGDRVGAKAGERLPESAFMEAAAESPGVDFDGATQSLLDGGLIGHEDGEFILTQEGYDYLYTRSGHRMGEG*
Ga0070685_100342413	3300005466	Switchgrass Rhizosphere	MPMILLSKGAEILLVQFHERKGDRVGAKAGERLPEDAFTEAAAESPGVDFDGATQSLLDGGLIRQEDGEFILTQEGYDYLYTRSGHRMGEG*
Ga0070685_113992662	3300005466	Switchgrass Rhizosphere	MILLSKGAEILLVQFHEAKGDRVGARPGDRLPESAFEEAAAESPGVDFEGAMQSLLDSNLVQKEGNEYVFTQEGYDYFYKGGGHRVGEG*
Ga0070735_102123792	3300005534	Surface Soil	MPMILLSKGAEILLLRFHEKNGDRVGAHPGDRLPQQLFEEAAAESPGVDFDGSMQSLLEGNLTRQEGEEFVLTQEGYDYLYKRAGHRMGEG*
Ga0068854_1004519242	3300005578	Corn Rhizosphere	MPMILLSKGAEILLVRFHERKGDRVGAAVGDRLPQSAFEEAAAESPGVDFEGAMQSLLEGNLVRKEGEEYVFTQEGYNYLYKRTGRRVGEG*
Ga0066654_100190864	3300005587	Soil	MPTILLSKGAEILLMQFHEEKGDRVGAGVGDRLPQSAFEEAAAESPGVDFEGAMQSLLEGSLVRKEGEEYVLAQEGYDYLYKRTGHRVGEG*
Ga0066654_108520452	3300005587	Soil	QFHETKGDRVGAKVGDRLPESAFMEAAAESPGVDFDGATQTLLDGGLIRQEDGEFILTQEGYDYLYKRTGHRVGEG*
Ga0068852_1007728691	3300005616	Corn Rhizosphere	MAITLLSKGAEILLVQFHEPKGDRVGARPDERVPQAVFEKAAAESPGVDFDGATQSLLDGNLIRREGEEFVLTQEGYDYLYKNAGHRVGEG*
Ga0066656_100922462	3300006034	Soil	MPTILLSKGAEILLMQFHEVKGDRVGAGVGDRLPQSAFEEAAAESPGVDFEGAMQSLLEGSLVRKEGEEYVLAQEGYDYLYKRTGHRVGEG*
Ga0070716_1004928092	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MPMILLSKGAEILLVQFHEEKGDRVGARPGDRLPQDVFEEAAAESPGVDFEGAMQSLQEGNLVRQEGEEFVLTQEGYDYLYKRSGHRMGEG*
Ga0066658_103111582	3300006794	Soil	MPTILLSKGAEILLMQFHEEKGDRVGASVGDRLPQSAFEEAAAESPGVDFEGAMQSLLEGSLVRKEGEEYVLAQEGYDYLYKRTGHRVGEG*
Ga0068865_1008129841	3300006881	Miscanthus Rhizosphere	MPMILLSKGAEILLVQFHEKKGDRVGAQVGDRLPESAFMEAAAESPGVDFDGATRSLLEGNLIRQENGDFILAQEGYDYLYKRSGHRMGEG*
Ga0079219_114845242	3300006954	Agricultural Soil	VGAEILLVQFHEQKGDRVGAQVGDRLPEQAFMEAAAESPGVDFDGATQSLLDGNLVRQEDGELILTQEGYDYLYKRAGHRVGEG*
Ga0126313_102487772	3300009840	Serpentine Soil	MTMPMILLSKGAEILLVQFHEAKGDRIGARPGDRLPESAFEEAAAESPGVDFEGAMQSLLEANLVKKEGEEYVFTQEGYDYFYKGAGHRVGEG*
Ga0126305_100021885	3300010036	Serpentine Soil	MTMPMILLSKGAEILLVQFHEAKGDRIGARPGDRLPQSAFEEAAAESPGVDFEGAMQSLLDSNLVQREGEEYVFTQEGYDYFYKGGGHRVGEG*
Ga0126315_106613982	3300010038	Serpentine Soil	MTMPMILLSKGAEILLVQFHEAKGDRIGARPGDRLPESAFEEAAAESPGVDFEGAMQSLLEANLVKKEGEEYVFTQEGYDYFYKRAGHRVGEG*
Ga0126308_104134093	3300010040	Serpentine Soil	HEAKGDRIGARPGDRLPESAFEEAAAESPGVDFEGAMQSLLEANLVQKEGEEYVFTQEGYDYFYKGAGHRVGEG*
Ga0126314_104383042	3300010042	Serpentine Soil	MTMPMILLSKGAEILLVQFHEAKGDRLGARPGDRLPESAFEEAAAESPGVDFEGAMQSLLEANLVHKEGEEYVFTQEGYDYFYKGAGHRVGEG*
Ga0134124_103448762	3300010397	Terrestrial Soil	MPVTLLSKGAEILLVQFHEQKGDRVGAQVGDRLPEQAFMEAAAESPGVDFDGATQTLLEGNLVRQEDGEFILTQEGYDYLYKRTGHRVGEG*
Ga0134127_106197011	3300010399	Terrestrial Soil	MMPMILLSKGAEILLLRFHEKNGDRVGAHPGDRLPQQLFEEAAAESPGVDFDGSMQSLLEGNLIRQEGEDFILTQEGYDYLYKRTGHRMGES*
Ga0153944_10925492	3300012088	Attine Ant Fungus Gardens	EILLVQFHEKKGDRVGAQVGDRLPEQAFMEAAAESPGVDFDGAAQSLLEGSLVRQEDGNFILAQEGYDYLYKRTGHRVGEG*
Ga0150985_1004640193	3300012212	Avena Fatua Rhizosphere	TPADKEGDDMPITLLSKGAEILLVQFHERKGDRVGAKAGERVSESDFMAAAAESPGVDFDGATQSLLEGNLVRQEDGEFILTQEGYDYLYTRAGHRMGEG*
Ga0150985_1063449301	3300012212	Avena Fatua Rhizosphere	MPMILLSKGAEILLVQFHEQKGDRVGASVGDRLPQSAFEEAAAESPGVDFEGAMQSLLEGSLVRKKGEEYVLAQEGYDYLYKRTGHRVGEG*
Ga0150985_1146183671	3300012212	Avena Fatua Rhizosphere	RSPIDQEGDDDMPVTLLSKGAEILLVQFHEPKGDRVGAQVGDRLPEQAFTEAAAESPGVDFDGATQTLLDGSLVRQEDGEFILTQEGYDYLYKRTGHRVGEG*
Ga0150984_1030185321	3300012469	Avena Fatua Rhizosphere	MPTILLSKGAEILLMQFHEAKGDRTGARPGESLPAEAFRKVEAESPGVDFEGALESLLEGNLIQKEGEGYSLAQEGYDYLYKRVGHRVGEG*
Ga0150984_1051084821	3300012469	Avena Fatua Rhizosphere	MPTILLSKGAEILLMQFHEAKGDRAGARPGESLPEEAFRKVQAESPGVDFEGALDSLLEGDLIRKEGEGYIITQQGYDYLYKRVGHRVGEG*
Ga0150984_1099911532	3300012469	Avena Fatua Rhizosphere	GTRSPIDQEGDDDMPVTLLSKGAEILLVQFHEPKGDRVGAQVGDRLPEQAFTEAAAESPGVDFDGATQTLLDGSLVRQEDGEFILTQEGYDYLYKRTGHRVGEG*
Ga0150984_1113061512	3300012469	Avena Fatua Rhizosphere	RTPADKEGDDMPITLLSKGAEILLVQFHERKGDRVGAKPGERVSESDFMAAAAESPGVDFDGATQSLLEGNLVRQEDGEFILTQEGYDYLYTRAGHRMGEG*
Ga0150984_1124678201	3300012469	Avena Fatua Rhizosphere	PLPAFPVDKERRDMPTILLSKGAEILLMQFHEQKGDRVGARVGDRLPQSAFEEAAAESPGVDFEGAMQSLLEGSLVRKKGEEYVLAQEGYDYLYKRTGHRVGEG*
Ga0150984_1129258751	3300012469	Avena Fatua Rhizosphere	ALSPLTPTRKETTTMPMILLSKGAEILLVQFHEQKGDRVGAKVGDRLPEQAFTEAAAESPGVDFEGATQTLLEGSLIRQEDGEFILTQEGYDYLYKRTGHRVGEG*
Ga0150984_1202521882	3300012469	Avena Fatua Rhizosphere	MILLSKGAEILLLQFHEQNGDRVGARPGDRLPQQSFEEAAAESPGVDFDGATQSLLEGNLIRQEGEDFVLTQEGYDYLYKRTGHRMGES*
Ga0157216_102990872	3300012668	Glacier Forefield Soil	MPLILLSKGAEILLVQFHEEKGDRIGARPGDRLPQSAFEEAAAESPGVDFEGAMQSLLDSNLVQKEGEEYVFTQEGYDYFYKGGGHRVGEG*
Ga0164304_100035833	3300012986	Soil	MPMILLSKGAEILLVQFHEPKGDRVGAKAGERLPESAFMEAAAESPGVDFDGATQSLLDGGLIRQEDGEFILTQEGQDYLYTRSGHRMGEG*
Ga0157375_102887213	3300013308	Miscanthus Rhizosphere	MPMILLSKGAEILLVRFHERKGDRVGAAVGDRLPQSAFEEAAAESPGVDFEGAMQSLLEGNLVRKEGEEYVFTQEGYDYLYKRTGRRVGEG*
Ga0167622_10021393	3300015158	Glacier Forefield Soil	MPMILLSKGAEILLVQFHEEKGDRVGARPGDRLPQDAFEEAAAESPGVDFDGAMQSLAESNLVRQEGEEFVLTQEGYDYLYKRSGHRMGEG*
Ga0190265_100102516	3300018422	Soil	MSMILLSKGAEILLVQFHEQKGDRIGARPGETLTEDHFREAIEESPGVDFEGAMESLLDSNLVRKEGDGYAFTQEGYDYLYKRTGHRVGEG
Ga0066655_100413395	3300018431	Grasslands Soil	MPMILLSKGAEILLVQFHEKKGDRVGAQVGDRLPESAFTEAAAESPGVDFDGATQALLEGNLIRQEDGNFILTQEGYDYLYKRTGHRMGEG
Ga0066655_102515691	3300018431	Grasslands Soil	MPITLLSKGAEILLVQFHERKGDRVGASAGDRLPESAFMEAAAESKGVDFDGAMQSLLEGNLVRQEDGHFILSQEGYDYLYKRAGHRMGEG
Ga0066655_106121492	3300018431	Grasslands Soil	MPTILLSKGAEILLMQFHEEKGDRVGAGVGDRLPQSAFEEAAAESPGVDFEGAMQSLLEGSLVRKEGEEYVLAQEGYDSLYKRTGHRVGEG
Ga0190269_114980222	3300018465	Soil	QFHELKGERIGAKPGERVSADYLRETEAKSPGVDFEGALESLLDGHLIEQEGEEYVLTQEGYDYMYKRTGHRVGEG
Ga0190269_118374432	3300018465	Soil	MSMILLSKGEELLLVQFHEQAGERLGARPGDSLPEEAFRNLEAITPGVDFDGAVDALLQGHLIEKKDDGYIITQEGYDYLYKRTGHRVGEG
Ga0190268_104731523	3300018466	Soil	LSKGEELLLVQFHEQAGERLGAKPGDSLSEEAFRNLEAITPGVDFEGAVDSLLQGHLIEKKDDGYTITQEGYDYLYKRTGHRVGEG
Ga0066662_100033986	3300018468	Grasslands Soil	MPTILLSKGAEILLMQFHEQKGDRVGASVGDRLPQSAFEEAAAESPGVDFEGAMQSLLEGSLVRKEGEEYVLAQEGYDSLYKRTGHRVGEG
Ga0190274_112910612	3300018476	Soil	MPMILLSKGAEILLVQFHEAKGDRLGARPGDRLPQSAFEEAAAESPGVDFEGAMQSLLEANLVQKEGEEYVFTQEGYDYFYKGAGHRVGEG
Ga0190273_101216362	3300018920	Soil	MPMILLSKGAEILLVQFHEAKGDRVGARPGERLPASAFTEAAAESPGVDFDGATQSLLDANLIQQEGDEFIFTQEGYDYLYKGGGHRVGEG
Ga0193706_100004816	3300021339	Soil	MPMILLSKGAEILLVQFHESKGDRVGAKAGERLPESAFTEAAAESPGVDFDGATQSLLDGGLIRQEDGEFILTQEGYDYLYTRSGHRMGEG
Ga0247761_10069673	3300022878	Plant Litter	MPMILLSKGAEILLVQFHEAKGDRLGARPGERLPESAFTEAAAESPGVDFDGATQSLLDGGLIRQEDGEFILTQEGYDYLYKGGGHRVGEG
Ga0247765_10014437	3300023268	Plant Litter	MPMILLSKGAEILLVQFHEAKGDRLGARPGERLPESAFTEAAAESPGVDFEGATQSLLDGGLIQQEDGEFILTQEGYDYLYKGGGHRVGEG
Ga0207680_109490441	3300025903	Switchgrass Rhizosphere	MPMILLSKGAEILLVRFHERKGDRVGAAVGDRLPQSAFEEAAAESPGVDFEGAMQSLLEGNLVRKEGEEYVFTQEGYNYLYKRTGRRVGEG
Ga0207680_110525991	3300025903	Switchgrass Rhizosphere	MAITLLSKGAEILLVQFHEQKGDRVGARPDERVPQAVFEKAAAESPGVDFDGATQSLLDGNLIRQEGEEFVLTQEGYDYLYKNAGHRVGEG
Ga0207705_100345387	3300025909	Corn Rhizosphere	MAITLLSKGADILLVQFHERKGDRVGAQPGERVHQEVFEKAAAESPGVDFDGATQSLLDGNLVQREGEEFVLTQDGYDYLYKNKGHRVGEG
Ga0207660_112154652	3300025917	Corn Rhizosphere	MAITLLSKGAEILLVQFHELKGDRVGARPGERVHQEVFEKAAAESPGVDFDGATQSLMDGNLVQKEGEEFVLTQDGYDYLYKNKGHRVGEG
Ga0207662_112178441	3300025918	Switchgrass Rhizosphere	DQEGDDDMPVTLMSKGAEILLVQFHERKGDRVGAKAGERLPEDAFTEAAAESPGVDFDGATQSLLDGGLIRQEDGEFILTQEGYDYLYTRSGHRMGEG
Ga0207662_113574922	3300025918	Switchgrass Rhizosphere	MPTTLLSKGAEILLVQFHEQKGDREGARVGDRLPQSAFEEAAAISPGVDFEGAMQSLLDGGLVQKDGEEYVFTQE
Ga0207681_1000001525	3300025923	Switchgrass Rhizosphere	MPMILLSKGAEILLVQFHEQKGDREGAHVGDRLPQSAFEEAAAKSPGVDFEGAMQSLLDGNLLQKEGDEYVFSQEGYDYFYRGGGHRVGEG
Ga0207686_104306342	3300025934	Miscanthus Rhizosphere	MPMILLSKGAEILLVQFHEPKGDRVGAKAGERLPESAFMEAAAESPGVDFDGATQSLLDGGLIGHEDGEFILTQEGYDYLYTRSGHRMGEG
Ga0207651_121482832	3300025960	Switchgrass Rhizosphere	MPTTLLSKGAEILLVQFHEQKGDREGARVGDRLPQSAFEEAAAISPGVDFEGAMQSLLDGGLVQKDGEEYVFSQEGYDYFYKRTGHRVGEG
Ga0207675_1005085212	3300026118	Switchgrass Rhizosphere	MPMILLSKGAEILLVRFHERKGDRVGAAVGDRLPQSAFEEAAAESPGVDFEGAMQSLLEGNLVRKEGEEYVFTQEGYDYLYTRTGHRVGEG
Ga0209265_10106767	3300026308	Soil	MPVTLLSKGAEILLVQFHETKGDRVGAKVGDRLPESAFMEAAAESPGVDFDGATQTLLDGGLIRQEDGEFILTQEGYDYLYKRTGHRVGEG
Ga0209265_10263864	3300026308	Soil	MPTILLSKGAEILLMQFHEEKGDRVGAGVGDRLPQSAFEEAAAESPGVDFEGAMQSLLEGSLVRKEGEEYVLAQEGYDYLYKRTGHRVGEG
Ga0209152_100834411	3300026325	Soil	MPTILLSKGAEILLMQFHEEKGDRVGASVGDRLPQSAFEEAAAESPGVDFEGAMQSLLEGSLVRKEGEEYVLAQEGYDYLYKRTGHRVGEG
Ga0209152_101017054	3300026325	Soil	MPMILLSKGAEILLVQFHEMKGDRVGAQVDDRLPEQAFMEAAAESPGVDFEGATQSLLEGNLVRQEDGDFILTQEGYDYLY
Ga0208998_10024925	3300027524	Forest Soil	MPMILLSKGAEILLVQFHERKGDRVGAKAGDRLPESAFMEAAADSAGVDFDGAAHSLLEGNLVRQEDGEFILTEEGYDYLYKRTGHRMGES
Ga0209966_10759902	3300027695	Arabidopsis Thaliana Rhizosphere	MPMILLSKGAEIFLMQFHERKGDRIGARPDDRLSEDDFRKVGAESPGVDFEGAMESLLEGNLVRKEGEDYLLTQEGYNYLYKRTGHRV
Ga0209168_101463362	3300027986	Surface Soil	MPMILLSKGAEILLLRFHEKNGDRVGAHPGDRLPQQLFEEAAAESPGVDFDGSMQSLLEGNLTRQEGEEFVLTQEGYDYLYKRAGHRMGEG
Ga0268266_1000242914	3300028379	Switchgrass Rhizosphere	MPMILLSKGAEILLVQFHERKGDRVGAKAGERLPEDAFTEAAAESPGVDFDGATQSLLDGGLIRQEDGEFILTQEGYDYLYTRSGHRMGEG
Ga0102759_19492932	3300030858	Soil	MAITLLSKGAEILLVQFHEQKGDRVGARPGERVHQEVFEKAAAESPGVDFDGATQSLLDGNLIQKEGEEFVITQDGYDYLYKNKGHRVGEG
Ga0308196_10681731	3300030989	Soil	MPMILLSKGAEILLVQFHEAKGDRVGARPGERLPESAFMEAAAESPGVDFDGATQSLLDGGLIRQEDGEFILTQEGHDYLYTRSGHRMGEG
Ga0314816_10588092	3300031481	Soil	MPMILLSKGAEILLVQFHEVKGERLGARPGDRLPEEVFMATAAKSPGVDFEGAAESLLDGNLIQKEGEEFVLTQEGYDYMYKRTGHRVGEG
Ga0308175_1000309301	3300031938	Soil	EKKGDRVGAQVGDRLPEQAFTEAAAESPGVDFDGATQALLEGSLIRQEDGNFILTQEGYDYLYKRTGHRVGEG
Ga0308175_1000736261	3300031938	Soil	MPVTLLSKGAEILLVQFHEKKGDRVGAQVGDRLPEQAFTEAAAESPGVDFDGATQALLEGSLIRQEDGNFILTQEG
Ga0308176_100140754	3300031996	Soil	MPVTLLSKGAEILLVQFHEKKGDRVGAQVGDRLPEQAFTEAAAESPGVDFDGATQALLEGSLIRQEDGNFILTQEGYDYLYKRTGHRVGEG
Ga0307416_1021572581	3300032002	Rhizosphere	MPMILLSKGAEILLVQFHEMKGERVGAKPGDRVSAEYLRETEAKSPGVDFEGALESLLEGHLVEQDGEEYVLAQEGYDYMYKRTGHRVGEG
Ga0334913_000386_8994_9350	3300034172	Sub-Biocrust Soil	MACPLLRGLRGDSVSASPQTPQKGDDDMPMILLSKGAEILLVQFHEQKGDRVGASVGDSLPEEAFRKAEAESPGVDFEGAMESLLEGNLVRKEGEEYVFTQEGYDYLYKRTGHRVGEG
Ga0372943_0000797_11609_11941	3300034268	Soil	LPLGRPSADLPLTWKETTTMPMILLSKGAEILLVQFHEEKGDRVGARPGDRLPQEAFEEAAAESPGVDFEGAMQSLQEGNLVRQEGEEFVLTQEGYDYLYKRTGHRMGES
Ga0372943_0814610_333_608	3300034268	Soil	MAITLLSKGAEILLVQFHEQKGDRIGARPGDRLPQSAFEEAVAESPGVDFDGAMQSLLDSKLVHQEGEEFVFTQEGYDYFYKGGGHRVGEG
Ga0372943_0975697_125_400	3300034268	Soil	MPTILLSKGAEILLMQFHEQKGDRVGARVGDRLPQSAFEEAAAESPGVDFEGAMQSLLEGSLVRKKGEEYVLAQEGYDYLYKRTGHRVGEG
Ga0370481_0005726_1333_1611	3300034281	Untreated Peat Soil	MMPMILLSKGAEILLLRFHEKNGDRVGAHPGDRLPQQLFEEAAAESPGVDFDGSMRSLLEGNLTRQEGEDFVLTQEGYDYLYKRSGHRMGEG
Ga0334960_000061_20859_21134	3300034402	Sub-Biocrust Soil	MPMILLSKGAEILLVQFHEQKGDRVGAKVGDRLPESAFKEAEGESPGVDFEGAMQSLLDGNLVRKEGEEYVLAQEGYDYLYKRTGHRVGEG

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.71
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.71
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F101750

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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