Metagenome Family F101733

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F101733
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	71 residues
Representative Sequence	MRGAFVLRLGAETEPSENRFEGWVEEVDSGKELRFHSTGELIQFLGERFRAAFQSRHRELDQWRTSGSCEEEKS
Number of Associated Samples	79
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	11.76 %
% of genes near scaffold ends (potentially truncated)	34.31 %
% of genes from short scaffolds (< 2000 bps)	86.27 %
Associated GOLD sequencing projects	70
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (66.667 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (29.412 % of family members)
Environment Ontology (ENVO)	Unclassified (34.314 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.039 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.78% β-sheet: 16.22% Coil/Unstructured: 50.00%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF08281	Sigma70_r4_2	20.59
PF04542	Sigma70_r2	18.63
PF13191	AAA_16	11.76
PF00486	Trans_reg_C	3.92
PF04679	DNA_ligase_A_C	3.92
PF00106	adh_short	0.98
PF12833	HTH_18	0.98
PF17164	DUF5122	0.98
PF13437	HlyD_3	0.98
PF00440	TetR_N	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	18.63
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	18.63
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	18.63
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	18.63
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	3.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.67 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.67 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.67 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	26.47 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	22.55 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.96 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	22.55 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.96 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	22.55 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.96 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	22.55 %
Acidicapsa	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa	0.98 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	22.55 %
Acidicapsa acidisoli	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	0.98 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16622687	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1701	Open in IMG/M
3300000955\|JGI1027J12803_100164268	Not Available	1853	Open in IMG/M
3300002245\|JGIcombinedJ26739_100394005	All Organisms → cellular organisms → Bacteria	1264	Open in IMG/M
3300002910\|JGI25615J43890_1023495	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1017	Open in IMG/M
3300002914\|JGI25617J43924_10041354	All Organisms → cellular organisms → Bacteria	1663	Open in IMG/M
3300002914\|JGI25617J43924_10069297	All Organisms → cellular organisms → Bacteria	1289	Open in IMG/M
3300002917\|JGI25616J43925_10146767	All Organisms → cellular organisms → Bacteria	945	Open in IMG/M
3300002917\|JGI25616J43925_10316696	Not Available	580	Open in IMG/M
3300004114\|Ga0062593_100180665	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1651	Open in IMG/M
3300005439\|Ga0070711_100646762	All Organisms → cellular organisms → Bacteria → Acidobacteria	886	Open in IMG/M
3300005552\|Ga0066701_10152100	All Organisms → cellular organisms → Bacteria	1394	Open in IMG/M
3300005555\|Ga0066692_10566126	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	717	Open in IMG/M
3300005842\|Ga0068858_102373753	Not Available	524	Open in IMG/M
3300005921\|Ga0070766_10222240	All Organisms → cellular organisms → Bacteria	1189	Open in IMG/M
3300006173\|Ga0070716_100843679	Not Available	713	Open in IMG/M
3300006237\|Ga0097621_100132399	All Organisms → cellular organisms → Bacteria	2123	Open in IMG/M
3300006358\|Ga0068871_101972721	Not Available	555	Open in IMG/M
3300006854\|Ga0075425_100105376	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3210	Open in IMG/M
3300006881\|Ga0068865_100209120	All Organisms → cellular organisms → Bacteria	1519	Open in IMG/M
3300007255\|Ga0099791_10069599	All Organisms → cellular organisms → Bacteria	1595	Open in IMG/M
3300007255\|Ga0099791_10189607	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	967	Open in IMG/M
3300007255\|Ga0099791_10351274	Not Available	706	Open in IMG/M
3300007255\|Ga0099791_10375159	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300007265\|Ga0099794_10076968	All Organisms → cellular organisms → Bacteria	1640	Open in IMG/M
3300009038\|Ga0099829_10661683	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300009088\|Ga0099830_10240749	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1429	Open in IMG/M
3300009088\|Ga0099830_10689564	Not Available	840	Open in IMG/M
3300009089\|Ga0099828_10191656	All Organisms → cellular organisms → Bacteria	1822	Open in IMG/M
3300009147\|Ga0114129_10053733	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5650	Open in IMG/M
3300009162\|Ga0075423_10114354	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2828	Open in IMG/M
3300010043\|Ga0126380_10096838	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1758	Open in IMG/M
3300011269\|Ga0137392_10356542	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1212	Open in IMG/M
3300011269\|Ga0137392_11580562	Not Available	514	Open in IMG/M
3300011270\|Ga0137391_10386278	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1198	Open in IMG/M
3300011270\|Ga0137391_11136935	Not Available	629	Open in IMG/M
3300012096\|Ga0137389_10595881	All Organisms → cellular organisms → Bacteria	949	Open in IMG/M
3300012096\|Ga0137389_10733112	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300012189\|Ga0137388_10841537	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300012200\|Ga0137382_10873777	Not Available	648	Open in IMG/M
3300012211\|Ga0137377_10938623	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300012361\|Ga0137360_11552078	Not Available	567	Open in IMG/M
3300012361\|Ga0137360_11826457	Not Available	513	Open in IMG/M
3300012683\|Ga0137398_11163232	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300012917\|Ga0137395_10166527	All Organisms → cellular organisms → Bacteria	1518	Open in IMG/M
3300012917\|Ga0137395_10439866	Not Available	936	Open in IMG/M
3300012924\|Ga0137413_10186398	All Organisms → cellular organisms → Bacteria	1384	Open in IMG/M
3300012930\|Ga0137407_11884126	Not Available	570	Open in IMG/M
3300013296\|Ga0157374_10173768	All Organisms → cellular organisms → Bacteria	2102	Open in IMG/M
3300013296\|Ga0157374_10758007	Not Available	985	Open in IMG/M
3300015245\|Ga0137409_10058059	All Organisms → cellular organisms → Bacteria → Acidobacteria	3651	Open in IMG/M
3300015374\|Ga0132255_101280238	All Organisms → cellular organisms → Bacteria	1106	Open in IMG/M
3300020199\|Ga0179592_10072068	All Organisms → cellular organisms → Bacteria	1582	Open in IMG/M
3300020579\|Ga0210407_10125820	All Organisms → cellular organisms → Bacteria	1963	Open in IMG/M
3300020579\|Ga0210407_11273939	Not Available	550	Open in IMG/M
3300020580\|Ga0210403_10017824	All Organisms → cellular organisms → Bacteria	5675	Open in IMG/M
3300020580\|Ga0210403_10735171	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	788	Open in IMG/M
3300021046\|Ga0215015_10237315	All Organisms → cellular organisms → Bacteria	2406	Open in IMG/M
3300021086\|Ga0179596_10100063	All Organisms → cellular organisms → Bacteria	1315	Open in IMG/M
3300021088\|Ga0210404_10142797	All Organisms → cellular organisms → Bacteria	1248	Open in IMG/M
3300021178\|Ga0210408_10061469	All Organisms → cellular organisms → Bacteria	2934	Open in IMG/M
3300021178\|Ga0210408_10741655	Not Available	772	Open in IMG/M
3300021404\|Ga0210389_11309306	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300021432\|Ga0210384_10719395	All Organisms → cellular organisms → Bacteria	893	Open in IMG/M
3300021479\|Ga0210410_10442016	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1163	Open in IMG/M
3300021559\|Ga0210409_10262029	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1564	Open in IMG/M
3300023056\|Ga0233357_1000611	Not Available	2177	Open in IMG/M
3300025938\|Ga0207704_10691359	Not Available	844	Open in IMG/M
3300025939\|Ga0207665_11689084	Not Available	501	Open in IMG/M
3300026035\|Ga0207703_12226806	Not Available	524	Open in IMG/M
3300026304\|Ga0209240_1013281	All Organisms → cellular organisms → Bacteria	3138	Open in IMG/M
3300026319\|Ga0209647_1049215	All Organisms → cellular organisms → Bacteria	2283	Open in IMG/M
3300026354\|Ga0257180_1036390	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	679	Open in IMG/M
3300026358\|Ga0257166_1033819	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300026358\|Ga0257166_1055913	Not Available	565	Open in IMG/M
3300026360\|Ga0257173_1020863	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300026360\|Ga0257173_1066694	Not Available	527	Open in IMG/M
3300026376\|Ga0257167_1049986	Not Available	642	Open in IMG/M
3300026377\|Ga0257171_1076562	Not Available	588	Open in IMG/M
3300026469\|Ga0257169_1041630	Not Available	708	Open in IMG/M
3300026469\|Ga0257169_1071655	Not Available	561	Open in IMG/M
3300026480\|Ga0257177_1024947	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300026494\|Ga0257159_1039306	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	796	Open in IMG/M
3300026498\|Ga0257156_1051310	Not Available	848	Open in IMG/M
3300026498\|Ga0257156_1061270	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	778	Open in IMG/M
3300026499\|Ga0257181_1027635	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300026507\|Ga0257165_1048392	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	762	Open in IMG/M
3300026551\|Ga0209648_10195413	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1550	Open in IMG/M
3300026551\|Ga0209648_10307217	All Organisms → cellular organisms → Bacteria	1129	Open in IMG/M
3300026557\|Ga0179587_11065662	Not Available	532	Open in IMG/M
3300027537\|Ga0209419_1000361	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4390	Open in IMG/M
3300027610\|Ga0209528_1024679	All Organisms → cellular organisms → Bacteria	1325	Open in IMG/M
3300027655\|Ga0209388_1205825	Not Available	543	Open in IMG/M
3300028047\|Ga0209526_10450868	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300028673\|Ga0257175_1087721	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300031231\|Ga0170824_126753327	All Organisms → cellular organisms → Bacteria	1674	Open in IMG/M
3300031823\|Ga0307478_11210666	Not Available	629	Open in IMG/M
3300031962\|Ga0307479_10168577	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2150	Open in IMG/M
3300031962\|Ga0307479_11428189	Not Available	650	Open in IMG/M
3300032174\|Ga0307470_10081579	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1787	Open in IMG/M
3300032174\|Ga0307470_10918248	Not Available	689	Open in IMG/M
3300032205\|Ga0307472_100473967	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1071	Open in IMG/M
3300032205\|Ga0307472_102314689	Not Available	544	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.24%
Host-Associated	Host-Associated	11.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.24%
Plants	Host-Associated → Plants	11.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.24%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.90%
Roots	Host-Associated → Plants → Roots	1.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.39%
Loam	Environmental → Terrestrial → Soil → Loam	7.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.90%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.92%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	35.29%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.37%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.94%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.96%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	29.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	27.45%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	8.82%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.94%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.98%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002910	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300023056	Soil microbial communities from Shasta-Trinity National Forest, California, United States - GEON-SFM-MS2	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026354	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-B	Environmental	Open in IMG/M
3300026358	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-14-B	Environmental	Open in IMG/M
3300026360	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-B	Environmental	Open in IMG/M
3300026376	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-B	Environmental	Open in IMG/M
3300026377	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-B	Environmental	Open in IMG/M
3300026469	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-B	Environmental	Open in IMG/M
3300026480	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-B	Environmental	Open in IMG/M
3300026494	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-A	Environmental	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300026499	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-B	Environmental	Open in IMG/M
3300026507	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-B	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027537	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028673	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-B	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_02798420	2088090014	Soil	MRGAFVLRLGAETEPSENRFEGWVEEVDSGKELRFHSTGELIQFLGERFHAAFQSPHKEVDQWRASGSCEEEKS
JGI1027J12803_1001642683	3300000955	Soil	MRGAFVLRLGAETEPSENRFEGWVEEVDSGKELRFHSTGELVQFLGERFRAAFQSRHKEVDQWRTSGSGEEEKS*
JGIcombinedJ26739_1003940052	3300002245	Forest Soil	VRGAFVVRLGAETKPKQGLFEGWVEEVDSGKELRFHSAGDLIQFLGERFRAAFQSSDNEGAQRCGSCEEES*
JGI25615J43890_10234952	3300002910	Grasslands Soil	MRGAFVLRLGAETEPSENRFEGWVEEVDSGKELRFHSTGELIQFLGERFRAAFQSRHRELDQWRTSGSGEEEKS*
JGI25617J43924_100413544	3300002914	Grasslands Soil	MRGAFVLRLGAETEPSENRFEGWVEEVDSGKELRFHSTGELIQFLGERFRAAFQSRDRELDQTSGSGEEEKS*
JGI25617J43924_100692971	3300002914	Grasslands Soil	MRGAFVVRLGAETKPKQGLFEGWVEEVDSGKXLRFHSAGDLIQFLGERFRAAFQSSDXEGAQRCGSCEEES*
JGI25616J43925_101467673	3300002917	Grasslands Soil	MRGAFVLRLGAETEPSENRFEGWVEEVDSGKELRFHSTGELIQFLGERFRAAFQSRHRELDQRRTSGSCEEEKS*
JGI25616J43925_103166962	3300002917	Grasslands Soil	MRGAFVVRLGAETKPKQGLFEGWVEEVDSGKELRFHSAGDLIQFLGERFRAAFQSSDNEGAQRCGSCEEES*
Ga0062593_1001806653	3300004114	Soil	MRGAFVLRLGAETEPSENRFEGWVEEVDSGKELRFHSTGELIQFLGERFHAAFQSPHKEVDQWRASGSCEEEKS*
Ga0070711_1006467622	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MRGAFVVRLGAETEPSENRFEGWVEEVDSGKELRFHSTGELIQFLGERFRAAFQSRDRELDQTSGSGEEEKS*
Ga0066701_101521002	3300005552	Soil	MRGAFVLRLGAETEPSENRFEGWVEEVDSGKELRFHSTGELIQFLGERFRAAFQSRDRELDQWRTSGSGEEEKS*
Ga0066692_105661262	3300005555	Soil	MRGAFVLRLGAETEPSENRFEGWVEEVDSGKELRFHSTGELIQFLGERFRAAFQSRDRELDQWRTSGSDEEEKS*
Ga0068858_1023737531	3300005842	Switchgrass Rhizosphere	HTCFVLSAYADNVMRGAFVLRLGAETEPSENRLEGWVEEVDSGKELRFHSTGELIQFLGERFCSAYQSRHKGVDQWRASGSYEEEKS*
Ga0070766_102222401	3300005921	Soil	MRGAFVLRLGAETEPSENRFEGWVEEVDSGKELRFHSTGELIQFLGERFRAAFQSRHGELDQGRTSGSGEEEKS*
Ga0070716_1008436792	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MRGAFVLRLGAETEPSENRFEGWVEEVDSGKELRFHSTVELMWFLGERFRVAFQSHDKQGNPPNGDFL*
Ga0097621_1001323992	3300006237	Miscanthus Rhizosphere	MRGAFVLRLGAETEPSENRLEGWVEEVDSGKELRFHSTGELIQFLGERFCSAYQSRHKGVDQWRASGSYEEEKS
Ga0068871_1019727211	3300006358	Miscanthus Rhizosphere	FVLRLGAETEPSENRLEGWVEEVDSGKELRFHSTGELIQFLGERFCSAYQSRHKGVDQWRASGSYEEEKS*
Ga0075425_1001053762	3300006854	Populus Rhizosphere	MRGAFVIRLGAESKPSEDRFEGWVEEVDSGKELRFHSTGELIQFLSERFRAAFPSRAHKGVDQRSPCNSEES*
Ga0068865_1002091203	3300006881	Miscanthus Rhizosphere	MRGAFVLRLGAETEPSENRLEGWVEEVDSGKELRFHSTGELIQFLGERFCSAYQSRHKGVDQWRASGSYEEEKS*
Ga0099791_100695991	3300007255	Vadose Zone Soil	MRGAFVLRLGAETEPSENRFEGWVEEVDSGKELRFHSTGELIQFLGERFRAAFQSRHRELDQTSGSGEEEKS*
Ga0099791_101896071	3300007255	Vadose Zone Soil	MRGASVLQLGAETKPSEDRFEGWVEEVDSGKELRFHSTVELIEFLGECFLAALQSRHKEL
Ga0099791_103512741	3300007255	Vadose Zone Soil	MRGAFVVRLGAETKPKQGLFEGWVEEVDSGKELRFHSAGDLIQFLGERFRAAFQSSDNEGAQRCGSCDEES*
Ga0099791_103751591	3300007255	Vadose Zone Soil	TKPKQGLFEGWVEEVDSGKELRFHSAGELIQFLGERFRAAFQSSGNEGAQRCGSCDEES*
Ga0099794_100769684	3300007265	Vadose Zone Soil	NVMRGAFVVRLGAETKPKQGLFEGWVEEVDSGKELRFHSAGDLIQFLGERFRAAFQSSDNEGAQRCGSCDEES*
Ga0099829_106616833	3300009038	Vadose Zone Soil	MRGAFVLRLGAETEPSENRFEGWVEEVDSGKELRFHSTGELIQFLGERFRAAFQSRHTEVDQWRASGSCEEEKS*
Ga0099830_102407493	3300009088	Vadose Zone Soil	MRGAFVLRLGAETEPSENRFEGWVEEVDSGKELRFHSTGELIQFLGERFRAAFQSRHRELDQWRTSGSCEEEKS*
Ga0099830_106895641	3300009088	Vadose Zone Soil	AETKPKQGLFEGWVEEVDSGKELRFHSAGELIQFLGERFRAAFQSSDNEGAQRCGSCDEES*
Ga0099828_101916562	3300009089	Vadose Zone Soil	MRGAFVVRLGAETKPKQGLFEGWVEEVDSGKELRFHSAGELIQFLGERFRAAFQSSDNEGAQRCGSCDEES*
Ga0114129_100537332	3300009147	Populus Rhizosphere	MRGAFVLQLGAETKPSEDRFEGWVEEVDSGRELRFHSTVELIEFLGECFLAALQSRHKELDQAADPGCDEEEEV*
Ga0075423_101143542	3300009162	Populus Rhizosphere	MRGAFVLQLGAETKPSEDRFEGWVEEVDSGKELRFHSTVELIEFLGECFLAALQSRHKELDQAADPGCDEEEEV*
Ga0126380_100968382	3300010043	Tropical Forest Soil	MRGAFVLQLGAETSPSEDRFEGWVEEVDSGKEFRFHSTVELIEFLSECFLAALKSRHRELDQAADPGCDNSEEV*
Ga0137392_103565422	3300011269	Vadose Zone Soil	MRGAFVLRLGAETEPSENRFEGWVEEVDSGKELRFHSTGELIQFLGERFRTAFQSRHTEVDQWRASGSCEEEKS*
Ga0137392_115805621	3300011269	Vadose Zone Soil	MRGAFVVRLGAETKPKQGLFEGWVEEVDSGKELRFHSAGELIQFLSERFRAAFQSSDNEGAQRCGSCDEES*
Ga0137391_103862781	3300011270	Vadose Zone Soil	MRGAFVLRLGAETEPSENRFEGWVEEVDSGKELRFHSTGELIQFLGERFRVAFQSRHRELDQTSGSGEEEKS*
Ga0137391_111369352	3300011270	Vadose Zone Soil	MRGAFVVRLGAETKPKQGLFEGWVEEVDSGKELRFHSAGELIQFLGERFRAAFQSSGNEGAQRCGSCDEES*
Ga0137389_105958811	3300012096	Vadose Zone Soil	AETEPSENRFEGWVEEVDSGKELRFHSTGELIQFLGERFRVAFQSRHRELDQTSGSGEEEKS*
Ga0137389_107331123	3300012096	Vadose Zone Soil	AETEPSENRFEGWVEEVDSGKELRFHSTGELIQFLGERFRAAFQSRHRELDQWRTSGSCEEEKS*
Ga0137388_108415372	3300012189	Vadose Zone Soil	MRGAFVLRLGAETEPSENRFEGWVEEVDSGKELRFHSTGELIQFLGERFRAAFQSRHRELDQ
Ga0137382_108737771	3300012200	Vadose Zone Soil	MRGAFVLRLGAETEPSENRFEGWVEEVDSGKELRFHSTGELIQFLGECFRAAFQSRHRELDQRRTSGSCEEEKS*
Ga0137377_109386231	3300012211	Vadose Zone Soil	MRGAFVLRLGAETEPSENRFEGWVEEVDSGKELRFHSTGELIQFLGERFRAAFQSPHRELDQWRTSGSGEEEKS*
Ga0137360_115520781	3300012361	Vadose Zone Soil	MRGAFVLRLGAETDPSENRFEGWVEEVDSGKELRFHSTGELIQFLGERFRAAFPSRHRELDQGTSGSCEEEKS*
Ga0137360_118264571	3300012361	Vadose Zone Soil	MRGAFVVRLGAETKPKQGLFEGWVEEVDSGKELRFHSAGELIQFLGERFRAAFQSSDNEGAQRCGSCEEES*
Ga0137398_111632322	3300012683	Vadose Zone Soil	MRGAFVLRLGAETEPSENRFEGWVEEVDSGKELRFHSTGELIQFLGERFRAASQSRHRELDQW
Ga0137395_101665275	3300012917	Vadose Zone Soil	RLGAETEPSENRFEGWVEEVDSGKELRFHSTGELIQFLGERFRAAFQSRHRELDQTSGSGEEEKS*
Ga0137395_104398663	3300012917	Vadose Zone Soil	GAETEPSENRFEGWVEEVDSGKELRFHSTGELIQFLGERFRAARELDQWRSSGSCEEEKS
Ga0137413_101863983	3300012924	Vadose Zone Soil	MRGAFVLRLGAETEPSENRFEGWVEEVDSGKELRFHSTGELIQFLGERFRAAFQSRQRELDQWRTSGSGEEEKS*
Ga0137407_118841261	3300012930	Vadose Zone Soil	MRGAFVVRLGAETKPKQGLFEGWVEEVDSGKELRFHSAGELIQFLGERFRAAFQSSGNEGAQRCGSCEEEKS*
Ga0157374_101737685	3300013296	Miscanthus Rhizosphere	MRGAFVIRLGAETAPSDDRFEGWVEEVDSGKELRFHSTSELVKFLGERFCTAFPSQRQEAGQRPMGHL*
Ga0157374_107580071	3300013296	Miscanthus Rhizosphere	MRGAFILRLGAETEPSENRFEGWVEEVDSGKELRFHSTGELVQFLGERVCAAFQLRHKEVEQGRTSGFCEEEKS*
Ga0137409_100580593	3300015245	Vadose Zone Soil	MRGAFVLRLGAETEPSENRFEGWVEEVDSGKELRFHSTGELIQFLGERFRAAFQSRHRELDQTTGSGEEEKS*
Ga0132255_1012802383	3300015374	Arabidopsis Rhizosphere	AYADNVMRGAFVLRLGAETEPSENRLEGWVEEVDSGKELRFHSTGELIQFLGERFCSAYQSRHKGVDQWRASGSYEEEKS*
Ga0179592_100720681	3300020199	Vadose Zone Soil	MRGAFVLRLGAETEPSENRFEGWVEEVDSGKELRFHSTGELIQFLGERFRAAFQSRDRELDQTSGSGEEEKS
Ga0210407_101258204	3300020579	Soil	MRGAFVLRLGAETEPSENRFEGWVEEVDSGKELRFHSTGELIQFLGERFRAAFQSRHTEGDQWRASGSGEEEKS
Ga0210407_112739392	3300020579	Soil	MRGAFVVRLGAETEPSENRFEGWVEEVDSGKELRFHSTGELIQFLGERFRAAFQSRHGELDQGRTSGSGEEEKS
Ga0210403_100178242	3300020580	Soil	MRGAFVVRLGAETEPSENRFEGWVEEVDSGKELRFHSTGELIQFLGERFRAAFQSRHTEVDQWRASGSGEEEKS
Ga0210403_107351712	3300020580	Soil	MRGAFVVRLEAETEPTENHFEGWVEEVDSGKELRFHSTGELVQFLGERFRAAFQSRHKEVDQWRTSGSCEEEKS
Ga0215015_102373153	3300021046	Soil	MRGAFVVRLGAETEPSENRFEGWVEEVDSGKELRFHSTGELIQFLGERFRAAFQSPHRELDQWRTSGSGEEEKS
Ga0179596_101000633	3300021086	Vadose Zone Soil	MRGAFVVRLGAETKPKQGLFEGWVEEVDSGKELRFHSAGDLIQFLGERFRAAFQSSDNEGAQRCGSCEEES
Ga0210404_101427974	3300021088	Soil	MRGAFVLRLGAETEPSENRFEGWVEEVDSGKEMRFHSTDELIQFLGERFRAAFQSGHRELDQRRTSGSCEEEKS
Ga0210408_100614694	3300021178	Soil	MRGAFVLRLGAETEPSENRFEGWVEEVDSGKELRFHSTGELIQFLGERFRAAFQSRHTEVDQWRASGSCEEEKS
Ga0210408_107416553	3300021178	Soil	AETKPSENRFEGWVEEVDSGKELRFHSTGELIQFLGERFRAAFQSPHRELDQWRTSGSGEEEKS
Ga0210389_113093061	3300021404	Soil	MRGAFVLRLGAETEPSENRFEGWVEEVDSGKELRFHSTGELIQFLGERFRAAFQSRHGELDQGRTSGSGEEEKS
Ga0210384_107193951	3300021432	Soil	MRGAFVLRLGAETEPSENRFEGWVEEVDSGKELRFHSTDELIQFLGERFRAAFPSRHRELDQWRTSGSGEEEKS
Ga0210410_104420162	3300021479	Soil	MRGAFVLRLGAETEPSENRFEGWVEEVDSGKELRFHSTGELIQFLGERFRAAFQSRHTEGDQWRASGS
Ga0210409_102620291	3300021559	Soil	MRGAFVLRLGAETEPSENRFEGWVEEVDSGKELRFHSTGELIQFLGERFRAAFQSRHGELDQW
Ga0233357_10006114	3300023056	Soil	MRGAFVVRLGAETEPSENRFEGWVEEVDSGKELRFHSTGELIQFLGERFRAAFQSRDRELDQRRTSGSSEEEKS
Ga0207704_106913591	3300025938	Miscanthus Rhizosphere	MRGAFVLRLGAETEPSENRLEGWVEEVDSGKELRFHSTGELIQFLGERFCSAYQSRHKGVDQWRASGSY
Ga0207665_116890841	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MRGAFVLRLGAETEPSENRFEGWVEEVDSGKELRFHSTVELMWFLGERFRVAFQSHDKQGNPPNGDFL
Ga0207703_122268061	3300026035	Switchgrass Rhizosphere	HTCFVLSAYADNVMRGAFVLRLGAETEPSENRLEGWVEEVDSGKELRFHSTGELIQFLGERFCSAYQSRHKGVDQWRASGSYEEEKS
Ga0209240_10132811	3300026304	Grasslands Soil	MRGAFVLRLGAETEPSENRFEGWVEEVDSGKELRFHSTGELIQFLGERFRAAFQSRHRELDQWRTSGSGEEEKS
Ga0209647_10492151	3300026319	Grasslands Soil	MRGAFVLRLGAETEPSENRFEGWVEEVDSGKELRFHSTGELIQFLGERFRAAFQSRHRELDQWRTSGSCEEEKS
Ga0257180_10363901	3300026354	Soil	MRGAFVLRLGAETEPSENRFEGWVEEVDSGKELRFHSTGELIQFLGERFRAAFQSRDRELDQTSGSG
Ga0257166_10338193	3300026358	Soil	PSENRFEGWVEEVDSGKELRFHSTGELIQFLGERFRAAFQSRHTEVDQWRASGSCEEEKS
Ga0257166_10559131	3300026358	Soil	MRGAFVVRLGAETKPKQGLFEGWVEEVDSGKELRFHSAGELIQFLGERFRAAFQSSDNEGAQRCGSCDEES
Ga0257173_10208631	3300026360	Soil	PSENRFEGWVEEVDSGKELRFHSTGELIQFLGERFRAAFQSRHRELDQWRTSGSCEEEKS
Ga0257173_10666943	3300026360	Soil	ETEPSENRFEGWVEEVDSGKELRFHSTGELIQFLGERFRAAFQSRHTEVDQWRASGSCEEEKS
Ga0257167_10499862	3300026376	Soil	MRGAFVVRLGAETKPKQGLFEGWVEEVDSGKELRFHSAGDLIQFLGERFRAAFQSSDNEGAQRCGSCDEES
Ga0257171_10765621	3300026377	Soil	MRGAFVVRLGAETKPKQGLFEGWVEEVDSGKGLRFHSAGELIQFLGERFRAAFQSSDNEGAQRCGSCDEES
Ga0257169_10416303	3300026469	Soil	MRGAFVLRLGAETEPSENRFEGWVEEVDSGKELRFHSTGELIQFLGERFRAAFQSRDRELDQTSGSAEEEKS
Ga0257169_10716551	3300026469	Soil	MRGAFVVRLGAETKPKQGLFEGWVEEVDSGKELRFHSAGELIQFLGERFRAAFQSSDNEGAQRCGSCEEES
Ga0257177_10249471	3300026480	Soil	MRGAFVLRLGAETEPSENRFEGWVEEVDSGKELRFHSTGELIQFLGERFRAAFQSRQRELDQWRTSGSGEEEKS
Ga0257159_10393061	3300026494	Soil	MRGAFVLRLGAETEPSENRFEGWVEEVDSGKELRFHSTGELIQFLGERFRAAFQSRHREL
Ga0257156_10513101	3300026498	Soil	ETITGRHTSSVLSAYAGIVMRGAFVLRLGAETEPSENRFEGWVEEVDSGKELRFHSTGELIQFLGERFRAAFQSRHRELDQWRTSGSGEEEKS
Ga0257156_10612702	3300026498	Soil	MRGAFVVRLGAETKPKQGLFEGWVEEVDSGKELRFHSAGELIQFLGERFRAAFQSSDNEGAQRCGSCEES
Ga0257181_10276351	3300026499	Soil	NVMRGAFVVRLGAETKPKQGLFEGWVEEVDSGKELRFHSAGDLIQFLGERFRAAFQSSDNEGAQRCGSCDEES
Ga0257165_10483921	3300026507	Soil	MRGAFVLRLGAETEPSENRFEGWVEEVDSGKELRFHSTGELIQFLGERFRAAFQSRHRELDQWRTSGSGEEE
Ga0209648_101954133	3300026551	Grasslands Soil	MRGAFVVRLGAETKPKQGLFEGWVEEVDSGKELRFHSAGELIQFLGERFRAAFQSTDNEGAQRCGSCDEES
Ga0209648_103072171	3300026551	Grasslands Soil	MRGAFVVRLGAETKPKQGLFEGWVEEVDSGKELRFHSAGELIQFLGKRFRAAFQSSDNEGAQRCGSCDEES
Ga0179587_110656622	3300026557	Vadose Zone Soil	DSVMRGAFVLRLGAETEPSENRFEGWVEEVDSGKELRFHSTGELIQFLGERFRAAFQSRHTEVDQWRASGSCEEEKS
Ga0209419_10003617	3300027537	Forest Soil	MRGAFVLRLGAETEPSENRFEGWVEEVDSGKELRFHSTGELIQFLGERFRAAFQSRHGELDQGRT
Ga0209528_10246791	3300027610	Forest Soil	MRGAFVLRLGAETEPSENRFEGWVEEVDSGKELRFHSTGELIQFLGERFRAAFQSRQRELDQWRTSGSGEE
Ga0209388_12058251	3300027655	Vadose Zone Soil	MRGAFVVRLGAETKPKQGLFEGWVEEVDSGKELRFHSAGELIQFLGERFRAAFQSSGNEGAQRCGSCDEES
Ga0209526_104508681	3300028047	Forest Soil	VMRGAFVLRLGAETEPSENRFEGWVEEVDSGKELRFHSTDELMQFLGERFRAAFQTLHKEADQGPARGFCGEKES
Ga0257175_10877212	3300028673	Soil	MRGAFVLRLGAETEPSENRFEGWVEEVDSGKELRFHSTGELIQFLGERFRAAFQSRDREL
Ga0170824_1267533271	3300031231	Forest Soil	MRGAFVLRLGAETEPSENRFEGWVEEVDSGKELRFHSTGELIQFLGERFRAAFQSHHTEVDQWRASGSCEEEKS
Ga0307478_112106663	3300031823	Hardwood Forest Soil	DIVMRGAFVLRLGAETEPSENRFEGWVEEVDSGKELRFHSTGELIQFLGERFRAAFQSRHGELDQGRTSGSGEEEKS
Ga0307479_101685772	3300031962	Hardwood Forest Soil	MRGAFVLRLGAETEPSENRFEGRVEEVDSGKELRFHSTGELIQFLGERFRAAFQSRHTEVDQWRASGSCEEEKS
Ga0307479_114281893	3300031962	Hardwood Forest Soil	IVMRGAFVLRLGAETEPSENRFEGWVEEVDSGKELRFHSTGELIQFLGERFRAAFQSRQRELDQGRTSGSGEEEKS
Ga0307470_100815791	3300032174	Hardwood Forest Soil	MRGAFVLRLGAETEPSENRFEGWVEEVDSGKELRFHSTGELIQFLGERFRAAFQSRHGELDQWRTSGSGE
Ga0307470_109182482	3300032174	Hardwood Forest Soil	VIRLGAETKPSENRFEGWVEEVDSGKELRFHSTGELIQFLGERFRAAFQSPHRELDQWRTSGSGEEEKS
Ga0307472_1004739672	3300032205	Hardwood Forest Soil	MRGAFVLRLGAETEPSENRFDGWVEEVDSGKELRFHSTGELIQFLGERFRAAFQSGHKEVDQWRASGSCEEEKS
Ga0307472_1023146892	3300032205	Hardwood Forest Soil	YADVMRGAFVLRLGAETEPSENRFEGWVEEVDSGKELRFHSTGELVQFLGERFRAAFQSRHKEVDQWRTSGSCEEEKS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F101733

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences