Metagenome / Metatranscriptome Family F101723

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F101723
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	107 residues
Representative Sequence	MGDYKDNPARQFASAWQAATAALDQWRKQVTTATAEALDKLDPAVRDALEAARAVFAGKWGACQCPCATAHPQDQNVCDGRAVLTRRLGNADMSVCAPCAVAQGVAEMRR
Number of Associated Samples	82
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	59.80 %
% of genes near scaffold ends (potentially truncated)	44.12 %
% of genes from short scaffolds (< 2000 bps)	83.33 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (21.569 % of family members)
Environment Ontology (ENVO)	Unclassified (22.549 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.039 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.38% β-sheet: 8.70% Coil/Unstructured: 44.93%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF01906	YbjQ_1	3.92
PF00106	adh_short	2.94
PF00440	TetR_N	2.94
PF01243	Putative_PNPOx	2.94
PF00561	Abhydrolase_1	2.94
PF05988	DUF899	2.94
PF00300	His_Phos_1	2.94
PF04672	Methyltransf_19	1.96
PF01872	RibD_C	1.96
PF01027	Bax1-I	1.96
PF04675	DNA_ligase_A_N	1.96
PF04149	DUF397	1.96
PF05746	DALR_1	0.98
PF03466	LysR_substrate	0.98
PF08530	PepX_C	0.98
PF12697	Abhydrolase_6	0.98
PF04239	DUF421	0.98
PF02687	FtsX	0.98
PF11774	Lsr2	0.98
PF09286	Pro-kuma_activ	0.98
PF11160	Hva1_TUDOR	0.98
PF01717	Meth_synt_2	0.98
PF00750	tRNA-synt_1d	0.98
PF09180	ProRS-C_1	0.98
PF02441	Flavoprotein	0.98
PF02652	Lactate_perm	0.98
PF00400	WD40	0.98
PF13412	HTH_24	0.98
PF00199	Catalase	0.98
PF00072	Response_reg	0.98
PF12847	Methyltransf_18	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0393	Uncharacterized pentameric protein YbjQ, UPF0145 family	Function unknown [S]	3.92
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	2.94
COG0018	Arginyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	1.96
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	1.96
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	1.96
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	1.96
COG0442	Prolyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.98
COG0620	Methionine synthase II (cobalamin-independent)	Amino acid transport and metabolism [E]	0.98
COG0751	Glycyl-tRNA synthetase, beta subunit	Translation, ribosomal structure and biogenesis [J]	0.98
COG0753	Catalase	Inorganic ion transport and metabolism [P]	0.98
COG1620	L-lactate permease	Energy production and conversion [C]	0.98
COG2323	Uncharacterized membrane protein YcaP, DUF421 family	Function unknown [S]	0.98
COG2936	Predicted acyl esterase	General function prediction only [R]	0.98
COG4934	Serine protease, subtilase family	Posttranslational modification, protein turnover, chaperones [O]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	99.02 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	97.06 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.96 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	74.51 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	1.96 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.98 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	55.88 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.90 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.96 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.98 %
unclassified Acidimicrobiia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia	0.98 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.98 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	54.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.90 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.96 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.98 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.98 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.98 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	54.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.90 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.96 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.98 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.98 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.98 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	54.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.90 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.96 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.98 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.98 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.98 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001867\|JGI12627J18819_10003644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5735	Open in IMG/M
3300001867\|JGI12627J18819_10035845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2062	Open in IMG/M
3300001867\|JGI12627J18819_10307571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	638	Open in IMG/M
3300004121\|Ga0058882_1599600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	695	Open in IMG/M
3300005332\|Ga0066388_103509147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	801	Open in IMG/M
3300005435\|Ga0070714_101161977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	753	Open in IMG/M
3300005436\|Ga0070713_100034619	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4060	Open in IMG/M
3300005437\|Ga0070710_11383291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	526	Open in IMG/M
3300005524\|Ga0070737_10113484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1225	Open in IMG/M
3300005538\|Ga0070731_11086404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	529	Open in IMG/M
3300005764\|Ga0066903_101600139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1235	Open in IMG/M
3300006173\|Ga0070716_101007050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	659	Open in IMG/M
3300006175\|Ga0070712_100488492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1030	Open in IMG/M
3300006804\|Ga0079221_10101616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1414	Open in IMG/M
3300010048\|Ga0126373_10141860	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2273	Open in IMG/M
3300010048\|Ga0126373_10537920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1215	Open in IMG/M
3300010048\|Ga0126373_10581058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	1171	Open in IMG/M
3300010048\|Ga0126373_11753501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	685	Open in IMG/M
3300010361\|Ga0126378_11752779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	706	Open in IMG/M
3300010361\|Ga0126378_12129554	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	640	Open in IMG/M
3300010373\|Ga0134128_10857850	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1006	Open in IMG/M
3300010376\|Ga0126381_101279114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1060	Open in IMG/M
3300010398\|Ga0126383_10713116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1082	Open in IMG/M
3300011120\|Ga0150983_10784981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	793	Open in IMG/M
3300012357\|Ga0137384_10133620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2077	Open in IMG/M
3300012357\|Ga0137384_10844495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	739	Open in IMG/M
3300014654\|Ga0181525_10781106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	538	Open in IMG/M
3300016445\|Ga0182038_10513650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1024	Open in IMG/M
3300021170\|Ga0210400_10271852	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1388	Open in IMG/M
3300021170\|Ga0210400_11500148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	535	Open in IMG/M
3300021180\|Ga0210396_10921901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	744	Open in IMG/M
3300021402\|Ga0210385_10382740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1055	Open in IMG/M
3300021474\|Ga0210390_11259451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	595	Open in IMG/M
3300021560\|Ga0126371_10267719	All Organisms → cellular organisms → Bacteria	1828	Open in IMG/M
3300021560\|Ga0126371_11263351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	873	Open in IMG/M
3300022467\|Ga0224712_10115363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1157	Open in IMG/M
3300022532\|Ga0242655_10312646	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	514	Open in IMG/M
3300025916\|Ga0207663_10170461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1545	Open in IMG/M
3300025928\|Ga0207700_10068120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2727	Open in IMG/M
3300025929\|Ga0207664_11976396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	506	Open in IMG/M
3300026555\|Ga0179593_1131835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2419	Open in IMG/M
3300027002\|Ga0209110_1007037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1225	Open in IMG/M
3300027119\|Ga0209522_1011132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	976	Open in IMG/M
3300027158\|Ga0208725_1011889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1438	Open in IMG/M
3300027517\|Ga0209113_1007678	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1310	Open in IMG/M
3300027725\|Ga0209178_1089073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1021	Open in IMG/M
3300027817\|Ga0209112_10031621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1570	Open in IMG/M
3300027817\|Ga0209112_10114203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	882	Open in IMG/M
3300027817\|Ga0209112_10159618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	760	Open in IMG/M
3300027855\|Ga0209693_10438782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	629	Open in IMG/M
3300027908\|Ga0209006_10069900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3130	Open in IMG/M
3300028800\|Ga0265338_10000765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	54848	Open in IMG/M
3300028800\|Ga0265338_10002783	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	25563	Open in IMG/M
3300028877\|Ga0302235_10064333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1727	Open in IMG/M
3300028879\|Ga0302229_10425300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	590	Open in IMG/M
3300029943\|Ga0311340_10555101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1014	Open in IMG/M
3300029999\|Ga0311339_10465384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1297	Open in IMG/M
3300030007\|Ga0311338_10114863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3303	Open in IMG/M
3300030007\|Ga0311338_10849506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	903	Open in IMG/M
3300030007\|Ga0311338_11077261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	773	Open in IMG/M
3300030618\|Ga0311354_11815132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	529	Open in IMG/M
3300030741\|Ga0265459_11904594	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	706	Open in IMG/M
3300030888\|Ga0265769_123744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	500	Open in IMG/M
3300030906\|Ga0302314_10285739	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1922	Open in IMG/M
3300031027\|Ga0302308_10449641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	765	Open in IMG/M
3300031057\|Ga0170834_103636746	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	684	Open in IMG/M
3300031128\|Ga0170823_17086431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	520	Open in IMG/M
3300031234\|Ga0302325_10176506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3745	Open in IMG/M
3300031236\|Ga0302324_102946464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	568	Open in IMG/M
3300031236\|Ga0302324_103434191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	515	Open in IMG/M
3300031544\|Ga0318534_10235750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1056	Open in IMG/M
3300031544\|Ga0318534_10393855	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	796	Open in IMG/M
3300031572\|Ga0318515_10595399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	588	Open in IMG/M
3300031640\|Ga0318555_10528715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	639	Open in IMG/M
3300031680\|Ga0318574_10210719	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1118	Open in IMG/M
3300031708\|Ga0310686_113204542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1256	Open in IMG/M
3300031708\|Ga0310686_116714440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1945	Open in IMG/M
3300031713\|Ga0318496_10086148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1672	Open in IMG/M
3300031723\|Ga0318493_10104161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1427	Open in IMG/M
3300031744\|Ga0306918_11168589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	595	Open in IMG/M
3300031748\|Ga0318492_10307193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	826	Open in IMG/M
3300031768\|Ga0318509_10165280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1225	Open in IMG/M
3300031770\|Ga0318521_10208842	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1129	Open in IMG/M
3300031792\|Ga0318529_10189003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	954	Open in IMG/M
3300031896\|Ga0318551_10572098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	651	Open in IMG/M
3300031910\|Ga0306923_11351615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	753	Open in IMG/M
3300031954\|Ga0306926_13008862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	503	Open in IMG/M
3300031981\|Ga0318531_10203676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	892	Open in IMG/M
3300032035\|Ga0310911_10261809	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	991	Open in IMG/M
3300032074\|Ga0308173_11443049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	646	Open in IMG/M
3300032261\|Ga0306920_103296759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	602	Open in IMG/M
3300032515\|Ga0348332_12177029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1398	Open in IMG/M
3300032515\|Ga0348332_13591210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	666	Open in IMG/M
3300032770\|Ga0335085_10032025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	7315	Open in IMG/M
3300032893\|Ga0335069_10481795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1442	Open in IMG/M
3300032895\|Ga0335074_10081193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4337	Open in IMG/M
3300032895\|Ga0335074_10111941	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3563	Open in IMG/M
3300032895\|Ga0335074_10342179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1671	Open in IMG/M
3300032898\|Ga0335072_10049750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5654	Open in IMG/M
3300033134\|Ga0335073_10029909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7492	Open in IMG/M
3300033290\|Ga0318519_10482432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	745	Open in IMG/M
3300033475\|Ga0310811_10955747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	760	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.04%
Host-Associated	Host-Associated	1.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.06%
Plants	Host-Associated → Plants	1.96%
Aquatic	Environmental → Aquatic	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.35%
Peat	Environmental → Terrestrial → Peat	12.75%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.96%
Freshwater	Environmental → Aquatic → Freshwater	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.96%
Loam	Environmental → Terrestrial → Soil → Loam	23.53%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	12.75%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.86%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.96%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.96%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.98%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	28.43%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.59%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.69%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	12.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.84%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.86%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.96%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.96%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.98%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	12.75%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	12.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.80%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	6.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.92%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.94%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.96%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	1.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.96%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.98%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.98%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300004121	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF109 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005524	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen10_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027002	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027119	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027158	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF011 (SPAdes)	Environmental	Open in IMG/M
3300027517	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027817	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028877	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3	Environmental	Open in IMG/M
3300028879	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030741	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ANR Co-assembly	Environmental	Open in IMG/M
3300030888	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030906	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3	Environmental	Open in IMG/M
3300031027	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_3	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12627J18819_100036444	3300001867	Forest Soil	MADYQDNPKRQFAKAWHSATDALDEWRKQVTAATSEALDKLDPAVRSAMEAARAAVAGHWGACQCPCASAHPQDQGVCDGRAIMTRQLRGTSMPICAPCAVAQGVAEMRH*
JGI12627J18819_100358452	3300001867	Forest Soil	MADYADNPKRQFAKAWHTATDALDEWRKQVTAATSEALDKLDPAVRSAMEAARAAVAGHWGACQCPCVTAHPQDQGVCDGRAIMTRQLRGTSMPICAPCAVAQGVAEMRR*
JGI12627J18819_103075712	3300001867	Forest Soil	DHADNPAQQFAAAWHQAADALGQWRKQVSDATGEALDKLDPAVRAAVEAARAAVAGNWGACRCPCETAHPQDKGVCDGRAVLTRRLSGADMRICAPCAVSQGVAEMRR*
Ga0058882_15996001	3300004121	Forest Soil	AALGQWREQVTAATAEAMDKLDPAARAAVDAMRAAFTGDWGACQCPCTNAHPQDKDVCDHSAVLTRRLGDSDVPLCAPCAVAQGVAEMRR*
Ga0066388_1035091472	3300005332	Tropical Forest Soil	MAGDPVNPGRQFAAAWQAAVTALDQWRQQVTEATAEARDKLDPAVRSALDAARAVFAGNWGACRCMCTAAHPEDNGVCDGRAVMTRRLNGADVPICAPCAVAQGVAEMPP*
Ga0070714_1011619772	3300005435	Agricultural Soil	MEGYQENPKRQLAAAWQTAVSALGEWRDQVSSATSEAMEKLDPAVRAAFEAARAALAGNWGTCQCPCGAAHPQDKNVCDGSAVLTRRFGEKDVPLCAPCAVATGVAEMPH*
Ga0070713_1000346193	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MEGYQENPKRQLAAAWQTAVSALGEWRDQVASATSEAIEKLDPAVRAAFEAARATLVGNWGTCQCPCGAAHPQDRNVCDGSAVLTRRFGDKDVPLCAPCAVATGVAEMPH*
Ga0070710_113832911	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MEGYQENPKRQLAAAWQTAVSALGEWRDQVASATSEAIEKLDPAVRAAFEAARATLVGNWGTCQCPCGAAHPQDRNVCDGSAVLTRRFGDKDVPL
Ga0070737_101134842	3300005524	Surface Soil	MADYQDNPKRQFAKAWHSATDALDEWRKQVTAATSEALDKLDPAVRSAIEAARAAVAGHWGACQCPCASAHPQDQGVCDGRAIMTRQLRGTSMPICAPCAVAQGVAEMRH*
Ga0070731_110864041	3300005538	Surface Soil	VSALGEWADQVGAATSEAIDKLDPAVRAALEAARAALAGNWGTCQCPCAQAHPQDRNVCDGGAVLTRKLGEKDVPLCAPCAVATGVAEMPH*
Ga0066903_1016001392	3300005764	Tropical Forest Soil	MGDYEDNPGRQFAAAWQAATDAVDQWRKQVTAATAEALNKLDPAVRAAMEAARAVLVGKLGACQCPCDTAHPQDRNVCDGRAVLTRRLGRTDLPVCAPCAVAQGVAEMRR*
Ga0070716_1010070502	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MDEYPESPARELSAAWRAASAALGQWREQVTEATTEAMQKLDPAFRAAVEALRAAVTGNWGNCQCPCDTTHPQDLGVCDHSAILSRRISDADVALCAPCAVAQGVAEMPR*
Ga0070712_1004884922	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MEGNQENPKRQLAAAWQTAVSALGEWRDQVSSATSEAIEKLDPAVRAAFEAARAALAGNWGTCQCPCGAAHPQDRNVCDGSAVLTRRFGDKDVPLCAPCAVATGVAEMPH*
Ga0079221_101016161	3300006804	Agricultural Soil	MGDYPGSPAQRLAKAWQAASAALGEWREQVTTATSEAMDKLDPAARAAVEALRAAFNGDWGACQCPCANAHPQDKDVCDHSAVLTRRMGDADVPLCAPCAVAQGVAEMP*
Ga0126373_101418601	3300010048	Tropical Forest Soil	MGVYSDNPRQQLNTAWQVATAALDQWRKQVVAATSEAVDKLDPAFRAAVEAARAAVTGNWGACQCPCATAHPMDKGVCEGSAILTRRVSGRDMSLCAPCAVAQGVDEMKR*
Ga0126373_105379202	3300010048	Tropical Forest Soil	MADDPVNPGQQFAAAWQAAVTALDQWRQQVTEATAEARDKLDPAVRSALDAARAVFAGNWGACRCVCTETHPQDNGVCDGRAVMTRRLSGADVPICAPCAVAQGVAEMPP*
Ga0126373_105810582	3300010048	Tropical Forest Soil	MGVYSDNPRQQLTTAWQVATTALDQWRKQVTAATSEAVDKIDPALRAALEAARAAVVGNWGACQCPCATAHPQDKDVCEGSAILTRRVHGTDVSLCAPCAVAQGVNEMRR*
Ga0126373_117535012	3300010048	Tropical Forest Soil	MGDYKDNPARQFAAAWQAATSALDQWRKQVTAATAEALDRLDPAVRDAMEAARAVFAGNWGACQCPCATAHPQDQNVCDGRAVLTRRLGRADLLICAPCAVAQGVAEMRR*
Ga0126378_117527791	3300010361	Tropical Forest Soil	MGDYEDNPGRQFAAAWQAATDAVDQWRKQVTAATAEALNKLDPAVRAALEAARAVIVGRLGACQCPCDTAHPQDKNVCDGRAVLTRRLRNADLPVCAPCAVAQGVAEMRR*
Ga0126378_121295542	3300010361	Tropical Forest Soil	MGVYSDNPRQQLNTAWQVATAALDQWRKQVVDATSEAVDKLDPAFRAAVEAARAAVTGNWGACQCPCATAHPMDKGVCEGSAILTRRVSGRDMSLCAPCAVAQGVDEMKR*
Ga0134128_108578501	3300010373	Terrestrial Soil	MGDYPGSPAQRLAKAWQAASAALGEWREQVSTATSEAIDKLDPAARTAVDALRAAFAGDWGACQCPCANAHPQDKDVCDHSAVLTRRMGDTDVPLCAPCAV
Ga0126381_1012791141	3300010376	Tropical Forest Soil	MGKPESLVTAAIRWEHAVMGDYEDNPGRQFAAAWQAATDAVDQWRKQVSAATAEALNKLDPAVRAAMEAARAVLVGKLGACQCPCDTAHPQDRNVCDGRAVLTRRLGRTDLPVCAPCAVAQGVAEMRR*
Ga0126383_107131163	3300010398	Tropical Forest Soil	MAGDPVNPGRQFAAAWQAAVTALDQWRQQVTEATAEARDKLDPAVRSALDAARAVFAGNWGACRCMCTAAHPEDNGVCDGRAVMTRRLNGADVPICAPCAV
Ga0150983_107849812	3300011120	Forest Soil	MDSNPDSPRRQFAAAWQTAMDALDQWRQQVTDATSEAMTKLDPAVKAAMEAGRAAFAGDWGACHCPCASAHPEDKGVCDGHGVVSRRLDEKDVWLCAPCAVAQGVAEMRH*
Ga0137384_101336202	3300012357	Vadose Zone Soil	MGDYPGSPKRQFAAAWQTAAAALDQWREQVTAATTEARDKLDPAVRTALEAVRAVLAGNWGACQCPCVTAHPQDKDVCDGSAILTRRLGEADVPLCAPCAVAQGVAEMPR*
Ga0137384_108444951	3300012357	Vadose Zone Soil	MGEYPESPARELSAAWRAASAALGHWREQVTEATTEAMQKLDPAFRTAVEALRAAVTGNWGNCQCPCATTHPQDLDVCDHSAILSRRIGDADVALCAPCAVAQGVAEMPR*
Ga0181525_107811062	3300014654	Bog	AAALGQWREQVTAATAEAMDKLDPAARAALDAMRAALAGDWGACQCPCANAHPQDKDVCDHSAVLTRRLSDSDVPLCAPCAVAQGVAEMRR*
Ga0182038_105136502	3300016445	Soil	MGDYKDNPARQFGAAWQAATTALDQWRKQVTAATAEALDRLDPAVRDALEAARAVFAGNWGACQCPCATAHPQDQNVCDGRAVLTRRLGNADMSVCAPCAVAQGVAEMRR
Ga0210400_102718522	3300021170	Soil	MGDYQGSPARRLAAAWQTAAVVLGEWREQVTVATAEAKDKLDPAFQAAVEAVRAAFNGDWGACQCSCAAAHPQDQGVCDASAVVTRRLGDKDVP
Ga0210400_115001481	3300021170	Soil	MEGYQENPRRQLAAAWQAAVSALGEWRDQVTSATSEAIDKLDPAVRAAFDAARATLAGNWGTCQCPCTAAHPQDANVCDGSAVLTRRLREKDV
Ga0210396_109219011	3300021180	Soil	TASAALGEWREQVTAATSEAKDKLDPAFRAAVEAVRSALAGNWGACQCPCATAHPQDKDVCDGSAILTRRFGEADVPLCAPCAVAQGVAEMPN
Ga0210385_103827401	3300021402	Soil	VANHADNPGRQFAAAWQDATAAFGQWRKQVTEATSEALDKLDPALRAALEAARAAVVGNWGACQCPCARTHPKDKDVCDGKAVLTRRLGEGDMQICAPCAVAQGVAEMRR
Ga0210390_112594511	3300021474	Soil	MMAGNAENPARQLAAAWREATTALGEWRKQVAAATTEAMDKLDPAVRAAVDAARGVLAGNWGVCECPCGTAHPQDKNVCDGRALLTRKLGQQDMSLCAPCAVAQGVAEMPH
Ga0126371_102677192	3300021560	Tropical Forest Soil	MADDPVNPGQQFAAAWQAAVTALDQWRQQVTEATAEARDKLDPAVRSALDAARAVFAGNWGACRCVCTETHPQDNGVCDGRAVMTRRLSGADVPICAPCAVAQGVAEMPP
Ga0126371_112633512	3300021560	Tropical Forest Soil	VTALDQWRQQVTEATAEARDKLDPAVRSALDAARAVFAGNWGACRCMCTAAHPEDNGVCDGRAVMTRRLNGADVPICAPCAVAQGVAEMPP
Ga0224712_101153631	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	AWQAATAALSEWRKQVTAATAEAIENLDPAVRTALEAARAAFAGNWGRCRCPCATAHPQDKDVCDGEAVMNRRLGDADIPLCAPCAVAQGVAEMPG
Ga0242655_103126461	3300022532	Soil	DNPRQQLNAAWQVATSALDQWAKQVTAATSEAVDKLDPAVRAAFEAARGAVTGDWKPCHCPCGSAHPADRGVCDGRAVVSRRLGDADVSLCAPCAVAQGVAEMRR
Ga0207663_101704611	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MEGYQENPKRQLAAAWQTAVSALGEWRDQVASATSEAIEKLDPAVRAAFEAARATLAGNWGTCQCPCGAAHPQDRNVCDGSAVLTRRFGDKDVPLCAPCAVATGVAEMPH
Ga0207700_100681201	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MEGYQENPKRQLAAAWQTAVSALGEWRDQVASATSEAIEKLDPAVRAAFEAARATLVGNWGTCQCPCGAAHPQDRNVCDGSAVLTRRFGDKDVPLCAPCAVATGVAEMPH
Ga0207664_119763961	3300025929	Agricultural Soil	MEGYQENPKRQLAAAWQTAVSALGEWRDQVSSATSEAMEKLDPAVRAAFEAARAALAGNWGTCQCPCGAAHPQDKNVCDGSAVLTRRFGEKDVPLCAPCAVATGVAEMPH
Ga0179593_11318353	3300026555	Vadose Zone Soil	MGDYPGNPKRQFAAAWQTAAAALDQWREQVTAATAEARDKLDPAVRTALEAVRAVLAGNWGACQCPCVTAHPQDKDVCDGSAILTRRLGEADVPLCAPCAVAQGVAEMPR
Ga0209110_10070372	3300027002	Forest Soil	MADYQDNPKRQFAKAWHSATDALDEWRKQVTAATSEALDKLDPAVRSAMEAARAAVAGHWGACQCPCASAHPQDQGVCDGRAIMTRQLRGTSMPICAPCAVAQGVAEMRH
Ga0209522_10111321	3300027119	Forest Soil	CETSVMADYADNPKRQFAKAWHTATDALDEWRKQVTAATSEALDKLDPAVRSAMEAARAAVAGHWGACQCPCVTAHPQDQGVCDGRAIMTRQLRGTSMPICAPCAVAQGVAEMRR
Ga0208725_10118892	3300027158	Forest Soil	MDSNPDSPRRQFAAAWQTAMDALDQWRQQVTDATSEAMTKLDPAVKAAMEAGRAAFAGDWGACHCPCASAHPEDKGVCDGHGVVSRRLDEKDVWLCAPCAVAQGVAEMRH
Ga0209113_10076781	3300027517	Forest Soil	KCENRVMADYQDNPKRQFAKAWHSATDALDEWRKQVTAATSEALDKLDPAVRSAMEAARAAVAGHWGACQCPCVTAHPQDQGVCDGRAIMTRQLRGTSMPICAPCAVAQGVAEMRR
Ga0209178_10890732	3300027725	Agricultural Soil	MGDYPGSPAQRLAKAWQAASAALGEWREQVTTATSEAMDKLDPAARAAVEALRAAFNGDWGACQCPCANAHPQDKDVCDHSAVLTRRMGDADVPLCAPCAVAQGVAEMP
Ga0209112_100316213	3300027817	Forest Soil	MADYLGNPAQQLAAAWQTASAALGEWREQVTAATTEAKDKLDPAFRAAVEALRSALSGNWGACQCPCATAHPQDKNVCDGKAILTRRFGEADVPLCAPCAVAQGVAEMPH
Ga0209112_101142032	3300027817	Forest Soil	MADHADNPAQQFAAAWHQAADALGQWRKQVSDATGEALDKLDPAVRAAVEAARAAVAGNWGACRCPCETAHPQDKGVCDGRAVLTRRLSGADMRICAPCAVSQGVAEMRR
Ga0209112_101596181	3300027817	Forest Soil	MADYADNPKRQFAKAWHTATDALDEWRKQVTAATSEALDKLDPAVRSAMEAARAAVAGHWGACQCPCVTAHPQDQGVCDGRAIMTRQLRGTSMPICAPCAVAQGVAEMRR
Ga0209693_104387821	3300027855	Soil	RQFAAEWQAAVSALGDWRDQVTTATSEAIEKLDPAVRAAVEAARAALAGNWGSCQCTCAATHPQDRNVCDGSAVLSRRLGDKDVPLCAPCAVAQGVAEMPG
Ga0209006_100699004	3300027908	Forest Soil	MGDYPGSPARQFAAAWQTASAALGQWREQVTAATSEAIEKLDPAFRTAVEALRATFAGDWGACRCRCDSAHPQDRGVCDGDAILTRRVGEADVPLCAPCAVAQGVAEMRPR
Ga0265338_1000076517	3300028800	Rhizosphere	MGDYPENPARQFAAAWQAATAALGQWRQQVTAATTEAVEKLDPALRTAVDAARMVLAGNWGVCQCPCDNAHPADMNVCDGRAVLTRHLGPKDVPLCAPCAVAQGVAEMPH
Ga0265338_1000278318	3300028800	Rhizosphere	MGDYPENPARQFASAWQAATAALSQWRVQVTAATSEAVEKLDPALRTAVDAARNVLAGNWGVCQCPCDSAHPADMNVCDGRAVLNRRLGPKDMPLCAPCAVAQGVAEMPH
Ga0302235_100643332	3300028877	Palsa	MGDYQDNPARQLAAAWQLAATALGQWREQVTTATTEAVEKLDPAVRAAVDAVKSALAGNWGLCQCPCDSAHPKDMGVCDGSAILTRQVGNSQMPLCAPCAVAQGVAEMPH
Ga0302229_104253002	3300028879	Palsa	MGDYPGSPARQFAAAWQTASAALGQWREQVTAATSEAIEKLDPAFRTAVEALRATFAGDWGACRCRCDSAHPQDRGVCDGDAILTRRVDEADVPLCAPCAVAQGVAEMRRR
Ga0311340_105551012	3300029943	Palsa	PARQLAAAWQLAATALGQWREQVTTATTEAVEKLDPAVRAAVDAVKSALAGNWGLCQCPCDSAHPKDMGVCDGSAILTRQVGNSQMPLCAPCAVAQGVAEMPH
Ga0311339_104653842	3300029999	Palsa	PTWFTYPPSALVITAIWWQANVMGDYPGSPARQFAAAWQTASAALGQWREQVTAATSEAIEKLDPAFHTAVEALRATFAGDWGACRCRCDSAHPQDRGVCDGDAILTRRVDEADVPLCAPCAVAQGVAEMRRR
Ga0311338_101148632	3300030007	Palsa	MGDYPGSPARQFAAAWQTASAALGQWREQVTAATSEAIEKLDPAFHTAVEALRATFAGDWGACRCRCDSAHPQDRGVCDGDAILTRRVDEADVPLCAPCAVAQGVAEMRRR
Ga0311338_108495061	3300030007	Palsa	YQDNPARQLAAAWQLAATALGQWREQVTTATTEAVEKLDPAVRAAVDAVKSALAGNWGLCQCPCDSAHPKDMGVCDGSAILTRQVGNSQMPLCAPCAVAQGVAEMPH
Ga0311338_110772611	3300030007	Palsa	MGDYPGSPARQFAAAWQTASAALGQWREQVTAATSEAIEKLDPAFRTAVEALRATFAGDWGACRCPCGTAHPQDQGVCDGDAILTRHVGDAELPLCAPCAVAQGVAEMPRER
Ga0311354_118151321	3300030618	Palsa	ENNAMGDYQDNPARQLAAAWQLAATALGQWREQVTTATTEAVEKLDPAVRAAVDAVKSALAGNWGLCQCPCDSAHPKDMGVCDGSAILTRQVGNSQMPLCAPCAVAQGVAEMPH
Ga0265459_119045941	3300030741	Soil	AALGQWREQVTAATAEAMDKLDPAARAAVDAMRAAFTGDWGACQCPCTRAHPQDKDVCDHSAVLTRRLADSDVPLCAPCAVAQGVAEMRR
Ga0265769_1237441	3300030888	Soil	DNPRQQLNAAWQVSTAALDQWRQQVTAATSEAMDKLDPAVRAALDAARAVVTGNWGACQCPCATAHPQDQDVCEGNAIMTRRVAGTDVSLCAPCAVAQGVAEMRR
Ga0302314_102857392	3300030906	Palsa	VITAIWWQANVMGDYPGSPARQFAAAWQTASAALGQWREQVTAATSEAIEKLDPAFHTAVEALRATFAGDWGACRCRCDSAHPQDRGVCDGDAILTRRVDEADVPLCAPCAVAQGVAEMRRR
Ga0302308_104496412	3300031027	Palsa	PRERPRSPSALVIDAVRCENNAMGDYQDNPARQLAAAWQLAATALGQWREQVTTATTEAVEKLDPAVRAAVDAVKSALAGNWGLCQCPCDSAHPKDMGVCDGSAILTRQVGNSQMPLCAPCAVAQGVAEMPH
Ga0170834_1036367461	3300031057	Forest Soil	YQENPRRQLAAAWQTAVSALGEWRDQVTAATSEVIDKLDPAVRAALEAARAALAGNWGTCQCPCGAAHPQDRNVCDGSAVLTRRLGEKDVPLCAPCAVATGVAEMPH
Ga0170823_170864312	3300031128	Forest Soil	YQENPRRQLAAAWQTAVSALGEWRDQVTAATSEVIDKLDPAVRAALEATRAALAGNWGTCQCPCAAAHPQDRNVCDGGAVLTRRLGEKDVPLCAPCAVATGVAEMPH
Ga0302325_101765064	3300031234	Palsa	RRSACPPTWFTYPPSALVITAIWWQANVMGDYPGSPARQFAAAWQTASAALGQWREQVTAATSEAIEKLDPAFHTAVEALRATFAGDWGACRCRCDSAHPQDRGVCDGDAILTRRVDEADVPLCAPCAVAQGVAEMRRR
Ga0302324_1029464641	3300031236	Palsa	MGDYPGSPARQFAAAWQTASAALGQWREQVTAATSEAIEKLDPAFRTAVEALRATFAGDWGACRCPCGTAHPQDQGVCDGDAILTRHVGDAELPLCAPCAVA
Ga0302324_1034341911	3300031236	Palsa	ITAIWWQANVMGDYPGSPARQFAAAWQTASAALGQWREQVTAATSEAIEKLDPAFRTAVEALRATFAGDWGACRCRCDSAHPQDRGVCDGDAILTRRVDEADVPLCAPCAVAQGVAEMRR
Ga0318534_102357502	3300031544	Soil	MGDYKDNPARQFASAWQAATAALDQWRKQVTTATAEALDKLDPAVRDALEAARAVFAGKWGACQCPCATAHPQDQNVCDGRAVLTRRLGNADMSVCAPCAVAQGVAEMRR
Ga0318534_103938551	3300031544	Soil	MAGLEDNPARQFAAAWQTATAALGKWRKQVTAATSEALDELDPAVRAAMEAARAVLAGNRRSCQCPCTTAHPQDKDVCDGNAILTRQQGVADIPLCAPCAVAQGVAEMRR
Ga0318515_105953991	3300031572	Soil	QTATAALDQWRKQVTAATAEALDRLDPAVRDALEAARAVFAGNWGACQCPCATAHPQDQNVCDGRAVLTRRLGRTDLPVCAPCAVAQGVAEMRR
Ga0318555_105287152	3300031640	Soil	WQAATTALDQWRKQVTAATAEALDRLDPAVRDALEAARAVFAGNWGACQCPCVTAHPQDQNVCDGRAVLTRRRGNADMSVCAPCAVAQGVAEMRR
Ga0318574_102107192	3300031680	Soil	MGDYEDNPGRQFAAAWQAATDAVDQWRKQVTAATAEALNKLDPAVRAAMEAARAVLVGKLGACQCPCDTAHPQDRNVCDGRAVLTRRLGRTDLPVCAPCAVAQGVAEMRR
Ga0310686_1132045424	3300031708	Soil	MGDYSGSPAQQFAAAWQTATAALGQWREQVTAATSEAIEKLDPAFRAAVDALRATFAGDWGACRCPCETAHPQDTGVCDGDAILTRRVGDAELPLCAPCAVAQGVAEM
Ga0310686_1167144402	3300031708	Soil	MDSNPDNPRRQLASAWQTARDALDQWRQQVTDATSEALTKLDPAVKAAMEAGRAAFTGDWGACHCPCATAHPDDKDVCDGHGVVSRQLSGADVWLCAPCAVAQGVAEMRN
Ga0318496_100861482	3300031713	Soil	MGDYKDNPARQFAAAWQAATTALDQWRKQVTAATAEALDRLDPAVRDALEAARAVFAGNWGACQCPCVTAHPQDQNVCDGRAVLTRRRGNADMSVCAPCAVAQGVAEMRR
Ga0318493_101041613	3300031723	Soil	MGDYKDNPARQFASAWQAATAALDQWRKQVTTATAEALDKLDPAVRDALEAARAVFAGKWGACQCPCATAHPQDQNVCDGRAVLTRRLGNADMSVCAPCAV
Ga0306918_111685892	3300031744	Soil	MGDYEDNPGRQFAAAWQAATDAVDQWRKQVTAATAEALNKLDPAVRAAMEAARAVLVGKLGACQCPCDTAHPQDRNVCDGRAVLTRRLGRTDLPVCAPCAV
Ga0318492_103071932	3300031748	Soil	GDYKDNPARQFASAWQAATAALDQWRKQVTTATAEALDKLDPAVRDALEAARAVFAGKWGACQCPCATAHPQDQNVCDGRAVLTRRLGNADMSVCAPCAVAQGVAEMRR
Ga0318509_101652803	3300031768	Soil	MGDYKDNPARQFASAWQAATAALDQWRKQVTTATAEALDKLDPAVRDALEAARAVFAGKWGACQCPCATAHPQDQNVCDGRAVLTRRLGNADMSVCAPWATA
Ga0318521_102088422	3300031770	Soil	AWQAATAALGEWRKQVTAATSEAMDKLDPAVRAALDAARAAFAGNWGACQCPCTTAHPQDKDVCDGSAILTRRLGQTEMRLCAPCAVAQGVAEMPH
Ga0318529_101890032	3300031792	Soil	MGDYKDNPARQFASAWQAATAALDQWRKQVTTATAEALDKLDPAVRDALEAARAVFAGNWGACQCPCVTAHPQDQNVCDGRAVLTRRRGNADMSVCAPCAVAQGVAEMRR
Ga0318551_105720981	3300031896	Soil	VMGDYKDNPARQFASAWQAATAALDQWRKQVTTATAEALDKLDPAVRDALEAARAVFAGKWGACQCPCATAHPQDQNVCDGRAVLTRRLGNADMSVCAPCAVAQGVAEMRR
Ga0306923_113516151	3300031910	Soil	AATTALDQWRKQVTAATAEALDRLDPAVRDALEAARAVFAGKWGACQCPCATAHPQDQNVCDGRAVLTRRLGNADMSVCAPCAVAQGVAEMRR
Ga0306926_130088621	3300031954	Soil	MGVYSDNPRQQLNAAWQVATSALDQWRQQVTAATSEAVDKLDPAIRAALEAARAVVTGNWGACQCPCATAHPQDRGVCEGGAIMTRRVAGTDMSLCAPCAVAQGVAEMRR
Ga0318531_102036762	3300031981	Soil	MGDYKDNPARQFAAAWQAATTALDQWRKQVTAATAEALDRLDPAVRDALEAARAVFAGNWGACQCPCVTAHPQDQNVCDGRAVLTRRLGNADMSVCAPCAVAQGVAEMRR
Ga0310911_102618091	3300032035	Soil	MGDYKDNPARQFAAAWQAATTALDQWRKQVTAATAEALDRLDPAVRDALEAARAVFAGNWGACQCPCATAHHQDQNVCDGRAVLTRRLGNADMSVCAPCAVAQGVAEMRR
Ga0308173_114430491	3300032074	Soil	LGQWREQVAEATTEAMAKLDPAFRAAVEALRAAMTGNWGNCQCPCARAHPQDAGVCDHSAILSRRIDDEDVALCAPCAVAQGVAEMPR
Ga0306920_1032967591	3300032261	Soil	DALDQWRKQVTAATAEALNKLDPAVRAAMEAARAVLVGKLGACQCPCVTAHPQDKNVCDGRAVLTRRLGKADLPVCAPCAVAQGVAEMRR
Ga0348332_121770291	3300032515	Plant Litter	MGDYSGSPAQQFAAAWQTATAALGQWREQVTAATSEAIEKLDPAFRAAVDALRATFAGDWGACRCPCDMAHPQDTGVCDGDAILTRRVGDAELPLCAPCAVAQGVAEMPR
Ga0348332_135912102	3300032515	Plant Litter	DNPRRQLASAWQTARDALDQWRQQVTDATSAALTKLDPAVKAAMEAGRAAFTGDWGACHCPCATAHPDDKDVCDGHGVVSRQLSGADVWLCAPCAVAQGVAEMRN
Ga0335085_100320257	3300032770	Soil	MGEYPESPARELSVAWQAASAALGQWREQVAEATTEAMAKLDPAFRAAVEALRAAVTGNWGNCQCPCATAHPQDPGVCDHSAILSRRIGDDDVALCAPCAVAQGVAEMPR
Ga0335069_104817953	3300032893	Soil	ARELSVAWQAASAALGQWREQVAEATTEAMAKLDPAFRAAVEALRAAVTGNWGNCQCPCATAHPQDPGVCDHSAILSRRIGDDDVALCAPCAVAQGVAEMPR
Ga0335074_100811933	3300032895	Soil	MGVYSDNPRQQLNTAWQVATSALDEWRKQVSAATTEAMDKLDPAVRAAVEAARAAVTGNWGACQCPCATAHPQDTNVCEGSAILTRRVRGTDVSLCAPCAVAQGVDEMRR
Ga0335074_101119413	3300032895	Soil	VTDRHPALVTGPVWCENGLVAGYPDNPARQFAAAWQAATAALGQWGKQVGAATSEALEQLDPAVRGALDAAKSVLAGNWGACQCPCFRAHPDDRDVCDGRAVLTRRVDETDMPLCAPCAVAQGVAEMRH
Ga0335074_103421792	3300032895	Soil	MGVYSDNPRQQLNTAWQVATSALDEWRKQVSAATTEAMDKLDPAVRAALEAARAAVTGNWGACQCPCATAHPQDTNVCEGSAILTRRVRGTDVSLCAPCAVAQGVDEMRR
Ga0335072_100497506	3300032898	Soil	MGVYSDNPRQQLNAAWQVATSALDQWRKQVTAATSEAVDKIDPALRAALEAARAAVTGNWGACQCPCATAHPQDKDVCEGSAILTRRVHGADVSLCAPCAVAQGVDEMRR
Ga0335073_100299099	3300033134	Soil	MGVYSDNPRQQLNTAWQVATSALDEWRKQVSAATTEAMDKLDPAVRAALEAARAAVTGNWGACQCPCATAHPQDTNVCEGSAILTRRVRGTDVALCAPCAVAQGVDEMRR
Ga0318519_104824321	3300033290	Soil	MGDYKDNPARQFASAWQAATAALDQWRKQVTTATAEALDKLDPAVRDALEAARAVFAGKWGACQCPCATAHPQDQNVCDGRAVLTRRLGNADMSV
Ga0310811_109557472	3300033475	Soil	MGDYPGSPAQRIAKAWQVASAALGEWREQVTAATSEAMDKLDPAARAAVDALRAAFSGDWGACQCPCANAHPQDKDVCDHSAVLTRRMGDADVPLCAPCAVAQGVAEMP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F101723

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences