Metagenome / Metatranscriptome Family F101711

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F101711
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	134 residues
Representative Sequence	MRWWGPLGLLAAIRVAIPLAAFADEGSSLPGMPAFVRSKRDGGLTGDATGFYAATREFMAAWGRMPRIVLALDLLFALVAAVAIVVLWRRRADLRPWLAAAALCAFGIVVAVDVHWMNPSGAAVFGWPL
Number of Associated Samples	93
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	8.82 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	96.08 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (11.765 % of family members)
Environment Ontology (ENVO)	Unclassified (29.412 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (50.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 53.50% β-sheet: 2.55% Coil/Unstructured: 43.95%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF01370	Epimerase	59.80
PF16363	GDP_Man_Dehyd	18.63
PF05088	Bac_GDH	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG2902	NAD-specific glutamate dehydrogenase	Amino acid transport and metabolism [E]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	81.37 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	81.37 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	63.73 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.98 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	63.73 %
Thermoleophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales	0.98 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	63.73 %
Thermoleophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae	0.98 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	63.73 %
Thermoleophilum	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum	0.98 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	63.73 %
Thermoleophilum album	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum → Thermoleophilum album	0.98 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918007\|ConsensusfromContig103012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1377	Open in IMG/M
2170459017\|G14TP7Y01C2XKY	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	582	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100467300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	704	Open in IMG/M
3300000956\|JGI10216J12902_113389484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	545	Open in IMG/M
3300001686\|C688J18823_10879276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	569	Open in IMG/M
3300002245\|JGIcombinedJ26739_101742977	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300005093\|Ga0062594_100189444	All Organisms → cellular organisms → Bacteria	1416	Open in IMG/M
3300005176\|Ga0066679_10627749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	701	Open in IMG/M
3300005178\|Ga0066688_10573915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	725	Open in IMG/M
3300005327\|Ga0070658_10478285	All Organisms → cellular organisms → Bacteria	1075	Open in IMG/M
3300005332\|Ga0066388_102859284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	882	Open in IMG/M
3300005332\|Ga0066388_105879373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	620	Open in IMG/M
3300005336\|Ga0070680_100403152	All Organisms → cellular organisms → Bacteria	1166	Open in IMG/M
3300005337\|Ga0070682_101792933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	535	Open in IMG/M
3300005339\|Ga0070660_101686029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	540	Open in IMG/M
3300005366\|Ga0070659_100627941	All Organisms → cellular organisms → Bacteria	925	Open in IMG/M
3300005435\|Ga0070714_101104778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	773	Open in IMG/M
3300005437\|Ga0070710_10541352	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300005445\|Ga0070708_101043216	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300005454\|Ga0066687_10279519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	940	Open in IMG/M
3300005458\|Ga0070681_10845397	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300005467\|Ga0070706_101659841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	582	Open in IMG/M
3300005526\|Ga0073909_10572312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	555	Open in IMG/M
3300005529\|Ga0070741_11117538	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	669	Open in IMG/M
3300005530\|Ga0070679_101306716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	671	Open in IMG/M
3300005532\|Ga0070739_10342108	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300005534\|Ga0070735_10070915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2244	Open in IMG/M
3300005535\|Ga0070684_101524264	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300005536\|Ga0070697_101027399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	733	Open in IMG/M
3300005545\|Ga0070695_100745810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	781	Open in IMG/M
3300005547\|Ga0070693_100396071	All Organisms → cellular organisms → Bacteria	956	Open in IMG/M
3300005554\|Ga0066661_10430377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	808	Open in IMG/M
3300005559\|Ga0066700_10487920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	861	Open in IMG/M
3300005560\|Ga0066670_10918004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	533	Open in IMG/M
3300005569\|Ga0066705_10564192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	704	Open in IMG/M
3300005598\|Ga0066706_10730086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	786	Open in IMG/M
3300005764\|Ga0066903_103872206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	804	Open in IMG/M
3300005892\|Ga0075275_1028842	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300006173\|Ga0070716_101336138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	581	Open in IMG/M
3300006175\|Ga0070712_100933671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	749	Open in IMG/M
3300006797\|Ga0066659_10537384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	942	Open in IMG/M
3300006800\|Ga0066660_11033126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	657	Open in IMG/M
3300009012\|Ga0066710_101765720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	937	Open in IMG/M
3300009090\|Ga0099827_11826270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	530	Open in IMG/M
3300009098\|Ga0105245_12344432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	587	Open in IMG/M
3300009137\|Ga0066709_103285738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	588	Open in IMG/M
3300009174\|Ga0105241_10436693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1155	Open in IMG/M
3300009551\|Ga0105238_11196800	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	784	Open in IMG/M
3300010371\|Ga0134125_11051790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	892	Open in IMG/M
3300010398\|Ga0126383_12564838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	594	Open in IMG/M
3300012198\|Ga0137364_10637402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	803	Open in IMG/M
3300012201\|Ga0137365_10651977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	771	Open in IMG/M
3300012204\|Ga0137374_10147310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum → Thermoleophilum album	2110	Open in IMG/M
3300012207\|Ga0137381_10855602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	787	Open in IMG/M
3300012208\|Ga0137376_11420274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	585	Open in IMG/M
3300012359\|Ga0137385_11219647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	614	Open in IMG/M
3300012683\|Ga0137398_10489013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	845	Open in IMG/M
3300012924\|Ga0137413_10827563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	713	Open in IMG/M
3300012927\|Ga0137416_11104169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	712	Open in IMG/M
3300012930\|Ga0137407_12196514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	527	Open in IMG/M
3300012961\|Ga0164302_10923284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	672	Open in IMG/M
3300012984\|Ga0164309_11933277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	506	Open in IMG/M
3300013102\|Ga0157371_10171574	All Organisms → cellular organisms → Bacteria	1550	Open in IMG/M
3300013105\|Ga0157369_10439063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1352	Open in IMG/M
3300013105\|Ga0157369_10686652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1055	Open in IMG/M
3300013105\|Ga0157369_12203611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	559	Open in IMG/M
3300015262\|Ga0182007_10044244	All Organisms → cellular organisms → Bacteria	1478	Open in IMG/M
3300015359\|Ga0134085_10327563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	677	Open in IMG/M
3300015373\|Ga0132257_104173677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	526	Open in IMG/M
3300018431\|Ga0066655_11355520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	514	Open in IMG/M
3300020069\|Ga0197907_10656748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	588	Open in IMG/M
3300020082\|Ga0206353_10240407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1155	Open in IMG/M
3300021080\|Ga0210382_10007329	All Organisms → cellular organisms → Bacteria	3644	Open in IMG/M
3300024222\|Ga0247691_1036339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	751	Open in IMG/M
3300025619\|Ga0207926_1101964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	698	Open in IMG/M
3300025764\|Ga0209539_1217979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	694	Open in IMG/M
3300025878\|Ga0209584_10372697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	551	Open in IMG/M
3300025906\|Ga0207699_11046693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	604	Open in IMG/M
3300025909\|Ga0207705_10146112	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1769	Open in IMG/M
3300025911\|Ga0207654_10409471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	944	Open in IMG/M
3300025912\|Ga0207707_11095770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	649	Open in IMG/M
3300025912\|Ga0207707_11156427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	628	Open in IMG/M
3300025921\|Ga0207652_10223031	All Organisms → cellular organisms → Bacteria	1699	Open in IMG/M
3300025922\|Ga0207646_10778727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	853	Open in IMG/M
3300025939\|Ga0207665_10238025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1340	Open in IMG/M
3300025949\|Ga0207667_10063409	All Organisms → cellular organisms → Bacteria	3861	Open in IMG/M
3300025990\|Ga0208527_1007382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1358	Open in IMG/M
3300026041\|Ga0207639_10962614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	799	Open in IMG/M
3300026142\|Ga0207698_11195342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	774	Open in IMG/M
3300027986\|Ga0209168_10629114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	512	Open in IMG/M
3300028654\|Ga0265322_10193349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	582	Open in IMG/M
3300028828\|Ga0307312_11171829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	508	Open in IMG/M
3300028828\|Ga0307312_11196987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	502	Open in IMG/M
3300028885\|Ga0307304_10071072	All Organisms → cellular organisms → Bacteria	1336	Open in IMG/M
3300030511\|Ga0268241_10173366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	537	Open in IMG/M
3300031938\|Ga0308175_100389430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1452	Open in IMG/M
3300031996\|Ga0308176_10290025	All Organisms → cellular organisms → Bacteria	1589	Open in IMG/M
3300031996\|Ga0308176_10648425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1090	Open in IMG/M
3300031996\|Ga0308176_11466090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	726	Open in IMG/M
3300031996\|Ga0308176_11891592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	637	Open in IMG/M
3300031996\|Ga0308176_12428887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	559	Open in IMG/M
3300033433\|Ga0326726_11303032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	707	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.37%
Host-Associated	Host-Associated	17.65%
Engineered	Engineered	0.98%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.39%
Plants	Host-Associated → Plants	17.65%
Aquatic	Environmental → Aquatic	0.98%
Solid Waste	Engineered → Solid Waste	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.41%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.73%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.92%
Freshwater	Environmental → Aquatic → Freshwater	0.98%
Peat	Environmental → Terrestrial → Peat	0.98%
Grass	Engineered → Solid Waste → Grass	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.94%
Loam	Environmental → Terrestrial → Soil → Loam	24.51%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.82%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.90%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.94%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.96%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.98%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.98%
Composting	Engineered → Solid Waste → Grass → Composting	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.47%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	19.61%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	14.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.82%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.90%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	3.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.94%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.96%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.98%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.98%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.98%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.98%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.98%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	11.76%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.78%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	7.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.90%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.92%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.96%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.96%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.98%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.98%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.98%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.98%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.98%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918007	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active_all	Environmental	Open in IMG/M
2170459017	Litter degradation ZMR4	Engineered	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005532	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005892	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_80N_305	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300024222	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK32	Environmental	Open in IMG/M
3300025619	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025764	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0011-312 (SPAdes)	Environmental	Open in IMG/M
3300025878	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025990	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_80N_102 (SPAdes)	Environmental	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028654	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG	Host-Associated	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030511	Bulk soil microbial communities from Mexico - Amatitan (Am) metaG (v2)	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
A_all_C_00047200	2140918007	Soil	MRWWGTLGVLAAIRVAIPLAAYADAGSGLPGMPAFTRPARDGGLSGDATGFYAATREFMAAWGRMPRTVLALDTLLALAAAVALVLLWRRRPAWRPWLAPAALCTFGLVVAVDVHWMNASGAAVFGWPLLWALPMLAYRALGVGLSKHIA
4ZMR_04784380	2170459017	Switchgrass, Maize And Mischanthus Litter	VRWWGPLGLLAAVRVAIPLAAYADRGSRLPGLPRFERPRANGGLSGDATGFYAATREFMAGWARMPRPLLALLVLVALAAAVTIAIAWRRRPGLRAWLVPAAVCTFGLIVCVDVHWMEPS
INPhiseqgaiiFebDRAFT_1004673002	3300000364	Soil	VRWWAPLGLLAAIRVAIPLAAYADEGDALPGVPGFDRPARDGGLQGDATGFYAATREFMAGWGRMPRAVLALDVLFLLAAATAIVVLWRKRPEWRGWLVAASSAALGLAVAVAVHWMEPSGAAVF
JGI10216J12902_1133894841	3300000956	Soil	MRWWGPLALFAAIRVAIPLAAYAHEGSSLPGMPAFVRSHRDGGLTGDATGFYAATREFMAAWGRMPRAVLGLDALLALAAAVTIVVLWRRRPDLRAWLAAAALFAFGLVV
C688J18823_108792761	3300001686	Soil	VRWWAPLGLLAAIRVAIPLAAFADEGDALPGMPRFDRPARDGGLQGDATGFYAATREFMAAWGRMPRPVLALDVLFVVAAATTLVVLWRRRPEWRAWLVAAA
JGIcombinedJ26739_1017429772	3300002245	Forest Soil	MRWWGPLGLLAAIRVAIPLAAYADAGSGLPGMPAFARPARYGGLSGDATGFYAATREFMAAWGRMPRSVLALDALLTLAAAVSLVLLWRRRPGSRPWLVP
Ga0062594_1001894441	3300005093	Soil	MRWWGPLGLLAAIRVAIPLAAFADEGSSLPGMPAFVRPKRDGGLTGDATGFYAATREFMAAWGRMPRIVLALDLLFALVAAVAIVVLWRRRADLRPWLAAAALCGFGI
Ga0066679_106277492	3300005176	Soil	MRWWGPLGLLAAIRVAIPLAAYADEGSSLPGLPTFSRSARDGGLTGDATGFYAATREFMAGFGRMPRPVLALDALLAIAALVAIVTLWRRRPTWHPWLIPAALCAFGLVVCI
Ga0066688_105739152	3300005178	Soil	MRWWAPLGLLAAIRVAIPLAAYADEGSSLPGLPAFSRRESDGGLTGDATGFYAATREFMAAFGRMPRIVLALDALLALAALVAIVALWRRRPGWRPWLAAVALCAFGLVVAVDVHWMEPSGAAVFGWPLVWALPLLAYRALGLGLSKHVAWDF
Ga0070658_104782852	3300005327	Corn Rhizosphere	VRWWGPLGLLAAVRVAIPLAAYADEGSRLPGMPRFERSTALGGLMGDATGFYAATREFLAGWARMPAPLAALLLLLAAAGALALVLAWRRRPAWRAWLVPAAVCGFGLLVAVDVHWMEPSGAAVFGWPLVWALP
Ga0066388_1028592841	3300005332	Tropical Forest Soil	MRWWGPLGLLAAFRVAIPLATYVGAGLPGTPGFTRSPRDGGLTGDATGFYAATREFMAAWGRMPHAVLALDALLAVASAIAIVLLWRRQREWRPWLVVAAVAAFGLVVAVDVHWMEPSGAAVFGWPLVWAL
Ga0066388_1058793732	3300005332	Tropical Forest Soil	MRVPRPTTWWVALAILAAIRVAIPLAAYAHEGSALPGLPTFERADRFGGLTGDATGFYAATREFMAAWGRMPRPVLVLTVLGVLVSAALVVRAWRRRPELRPWLVPASLFVVGIAICIDI
Ga0070680_1004031522	3300005336	Corn Rhizosphere	MRWWGPLGLLAAIRVAIPLAAYAGSSFPGTPGFTRPARDGGLEGDATGFYAATREFMAAWGRMPRAVLALDALFALAAVVAIVVLWRRRPQWRAWLAAAAVCAFGLVVCVDVHWMEATGAAVFGWSLLWSLPMLPYRLLGF
Ga0070682_1017929331	3300005337	Corn Rhizosphere	VRWWGPLGLLAAVRVAIPVAAYADRGSSLPGLPRFERPQAQGGLSGDATGFYAATREFMAGWARMPRPLLGLALIAGLATIVACGLLWRRRPDLRAWLVPALVCIIGLLVCLDVHWMEPSGAAVFGWLLAWAVAELPLRAAGAL
Ga0070660_1016860291	3300005339	Corn Rhizosphere	MRWWEPLGLLAAIRVAIPLAAYAGSSFPGTPGFTRPARDGGLEGDATGFYAATREFMAAWGRMPRAVLALDALFALAAVVAIVVLWRRRPQWRAWLAAAAVCAFGLVVCVDVHWMEATGAAVFGWSLLWSLPMLPYRLLGFGLSKHVAWDFGFALSLAIVALTVVAVAYLGRN
Ga0070659_1006279411	3300005366	Corn Rhizosphere	MRWWGPLGLLAAIRVAIPLAAFADEGSSLPGMPAFVRSKRDGGLTGDATGFYAATREFMAAWGRMPRIVLALDLLFALVAAVAIVVLWRRRADLRPWLAAAALCAFGIVVAVDVHWMNPSGAAVFG
Ga0070714_1011047782	3300005435	Agricultural Soil	VRWWGPLGLLAAVRVAVPFAALGGLPGVPHVHRSHSLGGLRGDATGFYAATREFMAGWARMPRPLLAVLVLIAIATVVAFVIAWRRRPALRPWLVPALVCVFGLVVCVDVHWMKATGAAVFGWSLLWSLPMLPYRVLGL
Ga0070710_105413522	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MRWWGPLGLLAAIRVAIPLAAYAGSSFPGTPAFTRPARDGGLEGDATGFYAATREFMAAWGRMPRAVLALDVLFALAAVGVFVVLWRRRPELRAWLAAGGLCAFGLVVCVDVHWMKATGAAVFGWSLLWSLPMLPYRVLGLGLSKHVAWDFGFALSL
Ga0070708_1010432162	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MATPRLTQWWGALSLLVAIRLAIPLAAYAHRGSKLPGIPRFTRPVHDGGLQGDATGFYAATREFMAAWGRMPHAVLGLVVLFVLTAAVALVVAWRRRPDFRPWIPPAALFAFGLAVCVDIHWMKASGAAVFGWPLVWSLPMLPYRALGFGLSKHVAWD
Ga0066687_102795192	3300005454	Soil	MRWWGPLGLLAAIRVTIPLAAYADQGSSLPGLPAFSRQARDGGLTGDATGFYAATREFMAGFARMPRPVLALDAFVAVAALVAIGTLWRRRPTWRPWLVPAALFAFGLVVSIDVH
Ga0070681_108453972	3300005458	Corn Rhizosphere	MRWWGPLGLLAAIRVAIPLAAYADRGSSLPGLPVFSRPTRDGGLTGDATGFYAATREFMAAFGRMPRAVLALDALLALAALVAIVLLWRRRPTWRAWLVPAALCAFGLVCAVGVHWMEPSGAAVFGWPLAWALPMLVYRALGRGLSEHVAWDFGVALSLVFVALTVV
Ga0070706_1016598411	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MRWWGPLGLLAAIRVAIPLAAYADRGSSLPGMPVFERSARDGGLTGDATGFYAAAREFMAAWGRMPRAVLALDGLLALAAAIAIAVLWRRRSSWRPRLVAA
Ga0073909_105723121	3300005526	Surface Soil	MRWWGPLGLLAAFRVATPLAAYAGASLPGTPDFTRSARDGGLTGDATGFYAATREFMAAWGRMPRPVLALDAVFGLVAAVAIVVLWRHRAAWRPWLVVAALAVFGLVVAVDVH
Ga0070741_111175381	3300005529	Surface Soil	VRWWGPLGILAAVRVAIPVAVLADRGSRLPGLPEFNRDRRLGGLTGDATGFYAATREFMAGWARMPHALLGLLVVVAVAAAVAFVVAWRRRPELRPWLAPAALCTFGLLVCVDVHWMKPSGAAVFGWPLVWA
Ga0070679_1013067161	3300005530	Corn Rhizosphere	MLAGYLDGRASLNEGFTAARAATVRRVRWWGPLGLLAAVRVAIPLAAYADEGSRLPGMPRFERSDALGGLMGDATGFYSATREFLAGWARMPRPLLALLVVVALAVAAAFVLGWRRRPGLRPWLVPAAVCVFGL
Ga0070739_103421081	3300005532	Surface Soil	VRWWGPLAILAAVRVAIPVAAFADRGSTLPGIPQFDRDPRLGGLVGDATGFYAATREFMAGWARMPHALFALLAIAALVAAVAFVRAWRRRPELRAWLAPAAVCAFGLLVCVDVHWMEPS
Ga0070735_100709153	3300005534	Surface Soil	MRVPRLTGWWSALALLAGLRVAIPLAAYASDGSKLPGIPAFTRAARFGGLTGDATGFYDATRDFMAAWGRMPRAVLVLDALFGIAAAVAIVLAWRRRRDLRPWLPAVALAAFGLVICVDVHWMRATG
Ga0070684_1015242642	3300005535	Corn Rhizosphere	MRWWGPLGLLAAIRVAIPLAAFADEGSSLPGMPAFVRSKRDGGLTGDATGFYAATREFMAAWGRMPRIVLALDLLFALVAAVAIVVLWRRRADLRPWLAAAALCAFGIVVAVDVHWMNPSGAAVFGWPL
Ga0070697_1010273992	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MRAPTVRGWWGALALLAGIRVAIPLAAYAAGLSPLPGLPTFTRSTHDGGLMGDATGFYAATREFMAAWGRMPRLVLALDALFVLGAAAAIAIAWRRRPQLRPWLVAAALAAFGLAVSVDVHWM
Ga0070695_1007458102	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MRWWGPLGLLAAIRVAIPLAAYADRGSRLPGLPAFSRSAQDGGLTGDATGFYAATREFMAAFGRMPRLVLALDALLTLAALVAIVTLWRRRPAWRPWLVPAALCA
Ga0070693_1003960712	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MRWWGPLGLLAAIRVALPLAAYADEGSSLPGMPAFVRSKRDGGLTGDATGFYAATREFMAAWGRMPRIVLALDLLFALVAAVAIVVLWRRRADLRPWLAAAALCGFGIVVAVDVHWMNPSGAAVFGWPLLWALPMAAYRVLGFGLSKHVAW
Ga0066661_104303771	3300005554	Soil	MRWWGPLGLLAAIRVAIPLAAYADEGSSLPGLPAFSRRESDGGLTGDATGFYAATREFMAAFGRMPRIVLALDALLALAALVAIVALWRRRPGWRPWLAAVALCAFGLVVA
Ga0066700_104879201	3300005559	Soil	MRWWAPLGLLAAIRVAIPLAAYADEGSSLPGLPAFSRRGSDGGLTGDATGFYAATREFMAAFGRMPRIVLALDALLALAALVAIVALWRRRPGWRPWLAAVALCAFGLVVAVDVHWMEPSGAAVFGWPLVWALPLL
Ga0066670_109180042	3300005560	Soil	MRWWAPLGLLAAIRVAIPLAAYADEGSSLPGLPAFSRRGSDGGLTGDATGFYAATREFMAAFGRMPRIVLALDALLALAALVAIVALWRRRPGWRPWLAAAALCAFGLVVAVDVHWMEPSGA
Ga0066705_105641921	3300005569	Soil	MSPTLRGWWAALGLLVAVRLAIPLASYAESGAHVPGVPDFARTSADGGLQGDATGFYAAARQFMAAWGRMPRVILVLVALALLAATVAIVHAWTRRPALRPWLVPAALFALGLAICVDIHWMQRSGAAVFGWPLVWALPMLAYRGIGAGLSEHVAWDFGVALSLSFAA
Ga0066706_107300862	3300005598	Soil	MRWWGPLGLLAAIRVAIPLAAYADEGSSLPGLPAFSRRESDGGLTGDATGFYAATREFMAAFGRMPRIVLALDALLALAALVAIVALWRRRPGWRPWLAAVALCAFGLVVAVDVHWMEPSGAAVFGWPLVWALPLLAYRALGLGLSKHVAWDFG
Ga0066903_1038722062	3300005764	Tropical Forest Soil	MRWWGPLGLLAAIRIAVPAAVYLDRGSSLPGLPRFVRLSADGGLTGDATGFYAATREFMAAWARMPRAVFALDVLAALVAAVAIVVLWRRRPPWRPWLLPAALCAVGLVVAVDVHWMEPSGAAVFGWPLVWALPTLAVRVLF
Ga0075275_10288421	3300005892	Rice Paddy Soil	VRRSIPWWPTLGALAAARVAIALAAYADRGSKLPGMPRFVRPVSFGGLQGDATGFYEAAREFMAAWGRMPRVVLGLDALFAIGAAGAIVVLWRTRRSLRPWLPPAALLAFGLAVCVDVHWMTFTGAAVFGWPLVWALPMLPIRAVGRLDPGVAWDVGTA
Ga0070716_1013361382	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VRWWGPLCLLAAVRVAIPVAAYADRGSRLPGLPRFERPRALGGLSGDATGFYAATREFMAGWARMPRPLLGLAVIAGLATIVAFGLLWRRRPALRPWLAPALVCALGLLVCLDVHWMKPSGAAVFGWPL
Ga0070712_1009336712	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VRWWAPLGLLAAIRVAIPLAAYADEGNALPGLPRFDRPQRDGGLQGDATGFYAATREFMAAWGRMPRAVLALDALFVIAAATAIIVLWRRRPEWRAWLVAASSLAFGLAVAVDVHWMNPSGAAVFGWPLLWALPLTVVRVLFGLSKHVAWDVGFALSLAFVA
Ga0066659_105373841	3300006797	Soil	MRWWPPLGLLAAIRVAIPLAAYADEGSSLPGLPAFSRRESDGGLTGDATGFYAATREFMAAFGRMPRIVLALDALLALAALVAIVALWRRRPGWRPWLA
Ga0066660_110331261	3300006800	Soil	MRWWAPLGLLAAIRVAIPLAAYADEGSSLPGLPAFSRRESDGGLTGDATGFYAATREFMAAFGRMPRIVLALDALLALAALVAIVALWRRRPGWRPWLAAVALCAFGL
Ga0066710_1017657202	3300009012	Grasslands Soil	MRWWGPLGLLAAIRVAIPLAAYADRGSSLPGMPRFDRPARDGGLSGDATGFYAAAREFMAAWGRMPRPVLALDALLALTATIAIVVLWRSRPAWRPWLAAGAVCVFGLVVAVDVHWMDPSGAAVFGWPLAWALVLLPIRAVGLS
Ga0099827_118262701	3300009090	Vadose Zone Soil	MRWWGPIGLLAAIRVAIPLAAYADAGSGLPGLPAFTRSARDGGLSGDATGFYAATREFMAAWGRMPRLVLAGDVLLALAAAVALVLLWRRRRKWRPWLVPAALCAFGLVVCVDVHWMKPSGAAVFGWPLVWSLPMLAYRALGIGLSKHVAWDFGFTLSLLC
Ga0105245_123444321	3300009098	Miscanthus Rhizosphere	MRWWGPLGLLAAIRVAIPLAAFADEGSSLPGMPAFVRPKRDGGLTGDATGFYAATREFMAAWGRMPRIVLALDLLFALVAAVAIVVLWRRRADLRPWLAAAALCGFGIVVAVDVHWMNPSGAAVFGWPLLWALPMAAYRVLGFGLSKHVAWNFGFALSLVAVA
Ga0066709_1032857381	3300009137	Grasslands Soil	MRWSGPLGLLVAIRVAIPLAAYADEGSSLPGLPAFSRSPRDGGLTGDATGFYAATREFMAAFGRMPHLVLALDALLALAALVAIVTLWRRRPRWHPWLVPAALCAFGLVVAGDVHCMNP
Ga0105241_104366932	3300009174	Corn Rhizosphere	MRWWGPLGLLAAIRVAIPLAAFADEGSSLPGMPAFVRSKRDGGLTGDATGFYAATREFMAAWGRMPRIVLALDLLFALVAAVAIVVLWRRRADLRPWLAAAALCGFGIVVAVDVHWMNPSGAAVFGWPLLWALPMAAYRVLGFGLSKHVAWNFGFALSLVAVAATVV
Ga0105238_111968002	3300009551	Corn Rhizosphere	MRWWGPLGLLAAIRVAIPLAAYAGSSFPGTPGFTRPARDGGLEGDATGFYSATREFMAAWGRMPRAVLALDALFALAALVAIVVLWRRRPEWRAWLAAAAVCAVGLVVCVDVHWMEATGAAVFGWSLLWSLPMLPYRLL
Ga0134125_110517902	3300010371	Terrestrial Soil	MRWWGPLGLLAAIRVAIPLAVYADSGSRLPGVPEFTRSARDGGLQGDATGFYAATREFMAAWGRMPHLVLAGVALAAAAAAIALVSLWRRRPAWRPWVVPAALYVFGLVV
Ga0126383_125648381	3300010398	Tropical Forest Soil	MRWWGPLGLLAAIRVAIPLAAFVHEGSSLPGVPAFVRPAADGGLMGDATGFYAATREFMAAWGRMPRAVLALDTLLAIAGVVAIVAIWRRRPDLRAWLVVAALFLFGLVIAVDVHWMEATGAAVFGWSLVWSLPMLVYRGLGL
Ga0137364_106374022	3300012198	Vadose Zone Soil	MRWWGPLGLLAAIRVAIPLAAYADRGSSLPGMPRFDRPARDGGLSGDATGFYAAAREFMAAWGRMPRPVLALDALLALTATIAIVVLWRSRPAWRPWLAAAAVCVFGLVVAVDVQWMDPS
Ga0137365_106519772	3300012201	Vadose Zone Soil	VAVRVAIPLAAYADAGSSLPGLPEFQRQARDGGLMGDATGFYAAAREFMAAWGRMPRPVLVLAALFAVAAVTAIATGWRRRPEWRPWLVAAALCAFGLVVCADVHWMKPT
Ga0137374_101473103	3300012204	Vadose Zone Soil	MYYFHHVRWWGPLGLLVAVRVAIPLAAYADAGSSLPGLPAFQRQARDGGLMGDATGFYAAAREFMAAWGRMPRPVLVLAALFAVAAVTAIATGWRRRPEWRPWLVAAA
Ga0137381_108556021	3300012207	Vadose Zone Soil	MRWWGPIGLLAAIRVAIPLAAYADAGSGLPGLPAFTRSPLDGGLTGDATGFYAATREFMAAWGRMPRLVFAGDVLIGLAAVVVLLMLWRRRPPWRVWLVPAALCAFGLVVCVDVHWMKPSGAAVFGWPLLWSLPMLAYRALGVGLSKHIAWDFGFALTLLCIAATV
Ga0137376_114202741	3300012208	Vadose Zone Soil	MRWWGPIGLLAAIRVAIPLAAYADAGSGLPGLPAFTRSARDGGLTGDATGFYAATREFMAAWGRMPRLVLAGDVLFALAAAVALVLLWRRKPQWRPWLVPAA
Ga0137385_112196471	3300012359	Vadose Zone Soil	MRWWGSLGLLAAIRIAIPLAAYADVGSGLPGMPAFTRPAQDGGLSGDATGFYAATREFMAAWGRMPRPVLVLAALFAVAAVTAIAAGWRRRPEWRPWLVA
Ga0137398_104890131	3300012683	Vadose Zone Soil	MRWWGPIGLLAAIRLAIPLAVYADAGSGLPGLPAFTRSPRDGGLTGDATGFYAATREFMAAWGRMPRLVLAGDVLLALAAAVALVLLWRRKPQWRAWLVPAALCAFGLVVCVDVHWMKPSGAAVFGWPLLWSLPMLAYRALGFGLSKHVAWDFG
Ga0137413_108275631	3300012924	Vadose Zone Soil	MRWWGPIGLLAAIRLAIPLAVYADAGSGLPGLPAFTRSPRDGGLTGDATGFYAATREFMAAWGRMPRLVLAGDVLLALAAAVALVLLWQRKPQWRAWLVPAALCAFGLVVCVDVHWMKPSGAAVF
Ga0137416_111041691	3300012927	Vadose Zone Soil	MNPCISEATTLPRSFAEDVAAYADAGSGLPGMPAFTRPAQDGGLSGDATGFYAATREFMAAWGRMPRLVLALDVLLALAAAGALVLLWRRRPAWRPYLVPAALCAFGLVVSVDVHWMNASGAAVFGWPLLWSLPMLAYRALGVGLSKHIAWDFGFALTLL
Ga0137407_121965141	3300012930	Vadose Zone Soil	MRWWGPIGLLAAIRLAIPLAVYADAGSGLPGLPAFTRSPRDGGLTGDATGFYAATREFMAAWGRMPRLVLAGDVLLALAAAVALVLLWRRKPQWRAWLVPAALCAFGLVVCVDVHWMKPSGAAVFGWPLLW
Ga0164302_109232841	3300012961	Soil	VRWWAPLGLLAAIRVAIPLAAYADEGNALPVLPRFDRHHRDGGLQGDATGFYAATREFMAAWGRMPRTILALDALFVLAAAVLVVVLWRRRPDWRAWLVAGASC
Ga0164309_119332771	3300012984	Soil	VRWWAPLGLLAAIRVAIPLAAYADEGNALPGLPRFDRPHRDGGLQGDATGFYAATREFMAAWGRMPRAVLALDALFVIAAATAIIVLWRRRPEWRAWLVAASSLAFGLAVAVDVHWMNPSGAAVFGWPLLWALPLAVVRV
Ga0157371_101715741	3300013102	Corn Rhizosphere	VRWWGTLGLLAAVRVAIPLAAYADRGSRLPGLPRFVRGRADGGLSGDATGFYAATREFMAGWARMPRPLLGLLVVAALAAAVAFVVAWRKRQELRPWLVPAVVCVFGLIVCVDVHWMKPSGAAVFGWPLVWGIAELPFRGLG
Ga0157369_104390632	3300013105	Corn Rhizosphere	MRWWGPLGLLAAIRVAIPLAAFADEGSSLPGMPAFVRSKRDGGLTGDATGFYAATREFMAAWGRMPRIVLALDLLFALVAAVAIVVLWRRRADLRPWLAAAALCAFGIVVAV
Ga0157369_106866522	3300013105	Corn Rhizosphere	VRWWGPLGLLAAIRVAIPFAALAGLPGVPHVHRSPPLGGLRGDATGFYAATREFMAGWARMPRPLLALLVIAALATLVAFVAAWRRRPELRAWLVPAAVGAFGLFVCVDVHWMKPSGAAVFGWPLVWAIAELPFR
Ga0157369_122036111	3300013105	Corn Rhizosphere	VRWWGPLGILAAVRVAIPLAAYADRGSRLPGLPEFDRDRRLGGLTGDATGFYAATREFMAGWARMPHALLGLLVVVGLAGAVALVLAWHRRPALRPWLVPAAVCGFGLLVCVDVHWMEPSGAAVFGWPLVWALALLPFRAAGVLTHTLAWAVSLVL
Ga0182007_100442442	3300015262	Rhizosphere	VRWWGPLGLLAAVRVAIPVAAYADRGSSLPGLPRFERARARGGLSGDATGFYAATREFMAGWARMPRPLLGLVLIVGLATIVACVLLWRRRPELRAWLVPALLCVLGLLVCLDVHWMEPSGAAVFGWPLVWAIAELPLRAAGA
Ga0134085_103275631	3300015359	Grasslands Soil	MRWWGPLALLAAIRVAIPLAAYAGSGLPGTPSFTRSGRNGGLSGDATGFYAATREFMAAWGRMPRGLLVLATLVVLAAGIACTVVWRRRPDLRPWVSPAALCVFGLVVCLDVHWMEPSGAAVFGWPLVWALPMLAYRALGVGLSKHVAWDFGFAL
Ga0132257_1041736771	3300015373	Arabidopsis Rhizosphere	MRWWGPLGLLAAIRVAIPLAAYAERGSSLPGMPVFERSPRDGGLTGDATGFYAAAREFMAAWGRMPRAVFVLDALLALAAAVAFALLWRRRSSWRPWLVAAALLAFG
Ga0066655_113555201	3300018431	Grasslands Soil	RMRWWAPLGLLAAIRVAIPLAAYADEGSSLPGLPAFSRRGSDGGLTGDATGFYAATREFMAAFGRMPRIVLALDALLALAALVAIVALWRRRPGWRPWLAAAALCAFGLVVAVDVHWMEPSGAAVFGWPLVWALPLLAYRALGLGLSKHVAWDFGVALSLLFVALTVVAVA
Ga0197907_106567482	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	VRWWGTLGLLAAVRVAIPLAAYADRGSRLPGLPRFVRGRADGGLSGDATGFYAATREFMAGWARMPRPLLGLLVVAALAAAVAFVVAWRKRQELRPWLAPAVVCVFGLIVCVDVHWMKPSGA
Ga0206353_102404072	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	MLAGYLDGRASLNEGFTAARAATVRRVRWWGPLGLLAAVRVAIPLAAYADEGSRLPGMPRFERSDALGGLMGDATGFYSATREFLAGWARMPRPLLALLVVVGLAAAAGLVLGWRRRPGLRPWLVPAAVCVFGLLVCVDVHWMEFSGAAVFGWPLVWALALA
Ga0210382_100073291	3300021080	Groundwater Sediment	MRWWGPLGLLAAIRVAIPLAAYADEGSSLPGLPAFSRPAQDGGLTGDATGFYAATREFMAAFGRMPRLVLALDALLALAALVAIVTLWRRRPSWRPWLVPAALCAFGLVVSVDVHRMNPSGAAVFGWPLVWALPML
Ga0247691_10363392	3300024222	Soil	MRVPNVLRAMRVPKLTSWWSALALLIVVRIAIPLAAYAAGNSRLPGIPRFTRQSRDGGLMGDATGFYAAARDFMAAWGRMPRAVLALDALFAVAAATAIVIAWRRRPDLRHWLVAAALAAFGLVICVDVHWMNATGAAVFGWPLVWALPMLAYRGLGFGLS
Ga0207926_11019642	3300025619	Arctic Peat Soil	MRVRKLTSWWGALALLVAVRLAIPLAAYAAGNSRLPGIPQFTRPARDGGLMGDATGFYAATREFMAAWGRMPRAVLALDALFALAAATAIVLAWRRRPGLRPWLVAAALGAFGLVICVDVHWMKPTGAAVFGWPLVWALPMLAYRALGFGL
Ga0209539_12179791	3300025764	Arctic Peat Soil	MRVPKLTSWWGALALLVAVRLAIPLAAYAAGNSRLPGIPQFTRSARDGGLTGDATGFYDATRDFMAAWGRMPRAVLALDALFALAAATAIVLAWRRRPDLRAWLIAAALGAFGLVICVDVHWM
Ga0209584_103726971	3300025878	Arctic Peat Soil	MRVRKLTSWWGALALLVAVRLAIPLAAYAAGNSRLPGIPQFTRSARDGGLTGDATGFYAATRDFMAAWGRMPRAVLALDALFALAAATTIVLAWRRRPDLRPWLTAAALGAFGLVICVDVHWMKATGAAVFG
Ga0207699_110466932	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MRWWGPLGLLAAIRVAIPLAAYADRGSSLPGLPTFSRSARDGGLTGDATGFYAATREFMAAFGRMPRAVLALDALLALAAAVAIVLLWRRRPAWRARLVPAGICVFGLVCAVDVHWMKASGAAVFGWPLVWALPMLAYR
Ga0207705_101461121	3300025909	Corn Rhizosphere	MRWWGPLGLLAAIRVAIPLAAFADEGSSLPGMPAFVRSKRDGGLTGDATGFYAATREFMAAWGRMPRIVLALDLLFALVAAVAIVVLWRRRADLRPWLAAAALCAFGIVVAVDVHWMNPSGAAVFGWPLLWALPMAAYRVLGFGLSKHVAWNFG
Ga0207654_104094712	3300025911	Corn Rhizosphere	MRWWGPLGLLAAIRVAIPLAAFADEGSSLPGMPAFVRSKRDGGLTGDATGFYAATREFMAAWGRMPRIVLALDLLFALVAAVAIVVLWRRRADLRPWLAAAALCAFGIVVAVDVHWMNPSGAAVFGWPLLW
Ga0207707_110957701	3300025912	Corn Rhizosphere	MRWWGPLGLLAAIRVAIPLAAYADRGSSLPGLPVFSRPTRDGGLTGDATGFYAATREFMAAFGRMPRAVLALDALLALAALVAIVLLWRRRPTWRAWLVPAALCAFGLVCAVGVHWMEPSGAAVF
Ga0207707_111564271	3300025912	Corn Rhizosphere	MRWWGPLGLLAAIRVAIPLAAFADEGSSLPGMPAFVRSKRDGGLTGDATGFYAATREFMAAWGRMPRIVLALDLLFALVAAVAIVVLWRRRADLRPWLAAAALCAFGIVVAVDVHWMNPSGAAVFGWPLLWALPMAAYRVLGFGLSKHVAWNFGFALSLVAVAAT
Ga0207652_102230311	3300025921	Corn Rhizosphere	MRWWGPLGLLAAIRVAIPLAAYAGSSFPGTPGFTRPARDGGLEGDATGFYAATREFMAAWGRMPRAVLALDALFALAAVVAIVVLWRRRPQWRAWLAAAAVCAFGLVVCVDVHWMEATGAAVFGWSLLWSLPMLPYRLLGFGLSKHVAWDFGFALSLAIVALTVV
Ga0207646_107787272	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MATPRLTQWWGALSLLVAIRLAIPLAAYAHRGSKLPGIPRFTRPVHDGGLQGDATGFYAATREFMAAWGRMPHAVLGLVVLFVLTAAVALVVAWRRRPDLRPWIPPAALFAFGLAVCVDIHWMKASGAAVFGWPLVWSLPMLPYRALGFGLSKHVAWDMGTALSLVFVALTVI
Ga0207665_102380251	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MRWWGPLGLLAAIRVAIPLAAYADAGSGLPGMPAFTRSVHEGGLSGDATGFYAATREFMAAWARMPRPLFALVLVVGLATIVAFVLLWRRRAELRPRLVPALVGVLGLLACVDVHWMEPSGAAVFGWPLVWAIAELPLRAAGALTHASGWDV
Ga0207667_100634094	3300025949	Corn Rhizosphere	VRWWGTLGLLAAVRVAIPLAAYADRGSRLPGLPRFVRGRADGGLSGDATGFYAATREFMAGWARMPRPLLGLLVVAALAAAVAFVVAWRKRQELRPWLVPAVVCVFGLIVCVDVHWMKPSGAAVFGWPLVWGIAE
Ga0208527_10073822	3300025990	Rice Paddy Soil	VRRSIPWWPTLGALAAARVAIALAAYADRGSKLPDMPRFVRPGPIGGLQGDATGFYEAAREFMAAWGRMPRAVLGLDALFAIAAGAALVALWRRMPQWRAWLPPAALFALGLVVCVD
Ga0207639_109626142	3300026041	Corn Rhizosphere	MRWWGPLGLLAAIRVAIPLAAFADEGSSLPGMPAFVRSKRDGGLTGDATGFYAATREFMAAWGRMPRIVLALDLLFALVAAVAIVVLWRRRADLRPWLAA
Ga0207698_111953421	3300026142	Corn Rhizosphere	VRWWGTLGLLAAVRVAIPLAAYADRGSRLPGLPRFVRGRADGGLSGDATGFYAATREFMAGWARMPRPLLGLLVVAALAAAVAFVVAWRKRQDLRPWLVPAVVCVFGLIV
Ga0209168_106291141	3300027986	Surface Soil	MRVPRLTGWWSALALLAGLRVAIPLAAYASDGSKLPGIPAFTRAARFGGLTGDATGFYDATRDFMAAWGRMPRAVLVLDALFGIAAAVAIVLAWRRRRDLRPWLPAVALAAFGLVICVDVHWMRATGAAV
Ga0265322_101933492	3300028654	Rhizosphere	MRVRTLTSWWGALALLVAVRLAIPLAAYAAGNSRLPGIPRFIRSARDGGLTGDATGFYAATRDFMAEWGRMPRAVLALDALFALAAATAIVLAWRRRPDLRPWLTAAALGAFGLVICVDVHWMKATGAAVFWWPL
Ga0307312_111718291	3300028828	Soil	MRWWGSLGLLAAIRVAIPLAAYADAGSGLPGMPAFTRPAQDGGLTGDATGFYAATREFMAAWGRMPRLVLALDALFALAVAVALVLLWRRRPTWRPWLVPAALCSFGLVVAVDVHWMNPSGAAVFGWPLLWSLPMLAYRALGVGLSKHIAW
Ga0307312_111969871	3300028828	Soil	VRWWGPLGLLAAIRVAIPLAAFADEGSKLPGIPAFVRSSRDGGLTGDATGFYAATREFMAAWGRMPRVVLALDALFALAATVAIVLLWRRRPDLRPWLAAAALCVFGIVVAVDVHWMHASGAAVFGWPLLWALPMLAYRTLGIGLSKHVAWDFGLALSLLA
Ga0307304_100710722	3300028885	Soil	VRWWGPLGLLAAIRVAIPLAAFADEGSKLPGIPAFVRSSRDGGLTGDATGFYAATREFMAAWGRMPRVVLALDALFALAATVAIVLLWRRRPDLRPWLAAAALCVFGIVVAVDVHWMHASGAAVFGWPLLWALPMLAYRTLGIG
Ga0268241_101733661	3300030511	Soil	MRWWAPLGLLAAVRVAIALVAFADVPGLPHVDRPHTDGGLQGDATGFYAATREFMAGWGRMPRALFALLVVAAVAAAIVLVVAWRRRSDLRAYLAAAAVCAFGLLVCVDVHWMEPSGAAVFGWPLVWALAEL
Ga0308175_1003894301	3300031938	Soil	VRWWGPLGLLAAVRVAIPLAAYADRGSTLPGLPRFERPRVDGGLSGDATGFYAATREFMAGWARMPRPLFALLVLVALAAAVTTAVVWRRRPELRAWLVPAAVCTFGLIVCVDVHWMDASGAAVFGWPLVWALAELPFRAAGVLTHAVGYDVAFAL
Ga0308176_102900253	3300031996	Soil	VRWWGTLGLLAAVRVAVPLAAYADRGSRLPGLPRFARARADGGLRGDATGFYAATREFMAGWARMPRPLLGLLVILALAAVVAFVVAWRKRQELRPWLVPAAVCAFGLVVCVDVHWMNPSGAAVFGWPLVWGI
Ga0308176_106484251	3300031996	Soil	MRWWGPLGLLAAIRVAIPLAAYADRGSSLPGLPVFSRPTRDGGLTGDATGFYAATREFMAAFGRMPRAVLALDALLALAALVAIVLLWRRRPTWRAWLVPAALCAFGLVCAVGVHWMEPSGAAVFGWPLVWAL
Ga0308176_114660901	3300031996	Soil	VRWWGPLGLLAAVRVAIPLAAYADRGSTLPGLPRFERPRVDGGLSGDATGFYAATREFMAGWARMPRPLFALLVLVALAAAVTTAVVWRRRPELRAWLVPAAVCTFGLIVCVDVHWMDASGAA
Ga0308176_118915921	3300031996	Soil	VRWWGPLGLLAAVRVAIPLAAYADRGSHPPGMPRFDRPRAYGGLSGDATGFYAATREFMAGWARMPRPLLGLLVVVALVAVVAFAVAWRRRPDLRPWLLPAAVCAFGLFVCVDVHWMKA
Ga0308176_124288871	3300031996	Soil	VRWWGPLGILAAARVAIPLAAYADEGSKLPGIPVFRRDGRAGGLTGDATGFYAATREFMAGWARMPRPLLALLGVLTLASAVAVVLAWRRRPTWRPWLAPAALCGLGLLVSVDVHWMEPSGAAVFGW
Ga0326726_113030322	3300033433	Peat Soil	MRAPRLTGWWGALGLLAAVRLAIPLAAYADAGSKLPGIPRFTRPARDGGLMGDATGFYAATREFMSAWGRMPRPVLSLVVLAFLAAAAAIVVAWRRHPGRRAWLVPAALCAFGLAVCVDIHWMHASGAAVFGWPLVW

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F101711

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences