Metagenome Family F101696

Basic Information
Family ID	F101696
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	47 residues
Representative Sequence	VFFNRCASRNNLVVSWIEGVVSDAEAARIIEVVRDGMGWTRTP
Number of Associated Samples	84
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	99.02 %
% of genes from short scaffolds (< 2000 bps)	93.14 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Most Common Taxonomy
Group	Bacteria (98.039 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (11.765 % of family members)
Environment Ontology (ENVO)	Unclassified (23.529 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (33.333 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.80% β-sheet: 0.00% Coil/Unstructured: 66.20%
Feature Viewer

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Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF04820	Trp_halogenase	72.55
PF12831	FAD_oxidored	10.78
PF01209	Ubie_methyltran	6.86
PF00067	p450	2.94
PF01979	Amidohydro_1	0.98
PF13193	AMP-binding_C	0.98
PF13450	NAD_binding_8	0.98
PF00999	Na_H_Exchanger	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	6.86
COG2227	2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase	Coenzyme transport and metabolism [H]	6.86
COG2124	Cytochrome P450	Defense mechanisms [V]	2.94
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	0.98
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	0.98
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	0.98
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	0.98
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.04 %
Unclassified	root	N/A	1.96 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.04 %
Unclassified	root	N/A	1.96 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.04 %
Unclassified	root	N/A	1.96 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	67.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.94 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	2.94 %
Unclassified	root	N/A	1.96 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	67.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.94 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.96 %
Unclassified	root	N/A	1.96 %
Lentisphaerae	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae	0.98 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	67.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.94 %
Unclassified	root	N/A	1.96 %
Lentisphaeria	class	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → Lentisphaeria	0.98 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	0.98 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.98 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	64.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.94 %
Unclassified	root	N/A	1.96 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	0.98 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.98 %
Victivallales	order	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → Lentisphaeria → Victivallales	0.98 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	64.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.94 %
Unclassified	root	N/A	1.96 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	0.98 %
Victivallaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → Lentisphaeria → Victivallales → Victivallaceae	0.98 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.98 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	64.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.94 %
Unclassified	root	N/A	1.96 %
Haloferula	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Haloferula	0.98 %
Chthoniobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter	0.98 %
Victivallis	genus	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → Lentisphaeria → Victivallales → Victivallaceae → Victivallis	0.98 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	64.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.94 %
Unclassified	root	N/A	1.96 %
unclassified Haloferula	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Haloferula → unclassified Haloferula	0.98 %
Chthoniobacter flavus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	0.98 %
Victivallis vadensis	species	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → Lentisphaeria → Victivallales → Victivallaceae → Victivallis → Victivallis vadensis	0.98 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	64.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.94 %
Unclassified	root	N/A	1.96 %
Haloferula sp. BvORR071	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Haloferula → unclassified Haloferula → Haloferula sp. BvORR071	0.98 %
Chthoniobacter flavus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	0.98 %
Victivallis vadensis	species	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → Lentisphaeria → Victivallales → Victivallaceae → Victivallis → Victivallis vadensis	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_103686715	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300004009\|Ga0055437_10280403	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300005174\|Ga0066680_10146543	All Organisms → cellular organisms → Bacteria	1474	Open in IMG/M
3300005180\|Ga0066685_10147557	All Organisms → cellular organisms → Bacteria	1598	Open in IMG/M
3300005181\|Ga0066678_10731231	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	658	Open in IMG/M
3300005186\|Ga0066676_10485753	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300005332\|Ga0066388_100503967	All Organisms → cellular organisms → Bacteria → Proteobacteria	1846	Open in IMG/M
3300005332\|Ga0066388_102814681	All Organisms → cellular organisms → Bacteria	889	Open in IMG/M
3300005332\|Ga0066388_103173584	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	840	Open in IMG/M
3300005336\|Ga0070680_102006941	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	501	Open in IMG/M
3300005440\|Ga0070705_101782491	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300005450\|Ga0066682_10669362	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	642	Open in IMG/M
3300005547\|Ga0070693_100432360	All Organisms → cellular organisms → Bacteria	920	Open in IMG/M
3300005547\|Ga0070693_101453467	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	534	Open in IMG/M
3300005558\|Ga0066698_10204945	All Organisms → cellular organisms → Bacteria	1350	Open in IMG/M
3300005713\|Ga0066905_100355416	All Organisms → cellular organisms → Bacteria	1172	Open in IMG/M
3300005713\|Ga0066905_101125036	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300005713\|Ga0066905_101572818	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300005764\|Ga0066903_100031062	All Organisms → cellular organisms → Bacteria → Proteobacteria	6040	Open in IMG/M
3300005764\|Ga0066903_105861488	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	645	Open in IMG/M
3300006173\|Ga0070716_101828699	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → Lentisphaeria → Victivallales → Victivallaceae → Victivallis → Victivallis vadensis	503	Open in IMG/M
3300006844\|Ga0075428_100384579	All Organisms → cellular organisms → Bacteria	1504	Open in IMG/M
3300006854\|Ga0075425_100297697	All Organisms → cellular organisms → Bacteria	1856	Open in IMG/M
3300006854\|Ga0075425_100841497	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1050	Open in IMG/M
3300006880\|Ga0075429_100944764	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	754	Open in IMG/M
3300006880\|Ga0075429_101041373	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300006903\|Ga0075426_10783182	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	717	Open in IMG/M
3300007265\|Ga0099794_10385152	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	732	Open in IMG/M
3300009094\|Ga0111539_11023129	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	960	Open in IMG/M
3300009094\|Ga0111539_11482253	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	787	Open in IMG/M
3300009100\|Ga0075418_11710969	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	684	Open in IMG/M
3300009101\|Ga0105247_10234947	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1246	Open in IMG/M
3300009157\|Ga0105092_10755271	Not Available	568	Open in IMG/M
3300009814\|Ga0105082_1118002	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	514	Open in IMG/M
3300009816\|Ga0105076_1082045	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	610	Open in IMG/M
3300009822\|Ga0105066_1142669	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	546	Open in IMG/M
3300009837\|Ga0105058_1060384	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	857	Open in IMG/M
3300010046\|Ga0126384_10452517	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1097	Open in IMG/M
3300010046\|Ga0126384_11996990	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	555	Open in IMG/M
3300010048\|Ga0126373_12706992	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	553	Open in IMG/M
3300010359\|Ga0126376_12730778	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	543	Open in IMG/M
3300010362\|Ga0126377_11618735	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	722	Open in IMG/M
3300010362\|Ga0126377_11718489	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	703	Open in IMG/M
3300010398\|Ga0126383_10148187	All Organisms → cellular organisms → Bacteria	2184	Open in IMG/M
3300010400\|Ga0134122_10518530	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1083	Open in IMG/M
3300011421\|Ga0137462_1152376	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300012211\|Ga0137377_10828444	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	858	Open in IMG/M
3300012355\|Ga0137369_10115051	All Organisms → cellular organisms → Bacteria	2185	Open in IMG/M
3300012930\|Ga0137407_11724653	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	597	Open in IMG/M
3300012976\|Ga0134076_10137002	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	994	Open in IMG/M
3300015245\|Ga0137409_10103269	All Organisms → cellular organisms → Bacteria	2643	Open in IMG/M
3300015371\|Ga0132258_11021320	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2090	Open in IMG/M
3300015373\|Ga0132257_100902176	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1108	Open in IMG/M
3300016357\|Ga0182032_10336569	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1203	Open in IMG/M
3300016371\|Ga0182034_11494717	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	592	Open in IMG/M
3300016404\|Ga0182037_10768631	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	829	Open in IMG/M
3300016445\|Ga0182038_11236794	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	666	Open in IMG/M
3300018074\|Ga0184640_10542610	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	508	Open in IMG/M
3300018084\|Ga0184629_10686601	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	516	Open in IMG/M
3300020170\|Ga0179594_10049009	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1420	Open in IMG/M
3300021086\|Ga0179596_10690760	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	517	Open in IMG/M
3300021090\|Ga0210377_10102849	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Haloferula → unclassified Haloferula → Haloferula sp. BvORR071	1907	Open in IMG/M
3300025569\|Ga0210073_1072410	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	732	Open in IMG/M
3300025885\|Ga0207653_10150071	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	857	Open in IMG/M
3300025885\|Ga0207653_10320445	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	603	Open in IMG/M
3300025918\|Ga0207662_10481189	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	853	Open in IMG/M
3300025941\|Ga0207711_11660737	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	582	Open in IMG/M
3300025941\|Ga0207711_11754113	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	564	Open in IMG/M
3300026089\|Ga0207648_10924174	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	816	Open in IMG/M
3300026324\|Ga0209470_1026064	All Organisms → cellular organisms → Bacteria	3068	Open in IMG/M
3300026497\|Ga0257164_1069336	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	585	Open in IMG/M
3300026529\|Ga0209806_1049607	All Organisms → cellular organisms → Bacteria	1978	Open in IMG/M
3300026536\|Ga0209058_1152300	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1082	Open in IMG/M
3300026552\|Ga0209577_10173341	All Organisms → cellular organisms → Bacteria	1678	Open in IMG/M
3300027384\|Ga0209854_1059564	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	664	Open in IMG/M
3300027384\|Ga0209854_1081551	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	573	Open in IMG/M
3300027577\|Ga0209874_1064483	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	924	Open in IMG/M
3300027717\|Ga0209998_10114753	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	675	Open in IMG/M
3300031564\|Ga0318573_10650949	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	567	Open in IMG/M
3300031716\|Ga0310813_10688092	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	912	Open in IMG/M
3300031720\|Ga0307469_10257275	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1410	Open in IMG/M
3300031740\|Ga0307468_100083800	All Organisms → cellular organisms → Bacteria	1828	Open in IMG/M
3300031768\|Ga0318509_10630568	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300031777\|Ga0318543_10201171	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	884	Open in IMG/M
3300031821\|Ga0318567_10163173	All Organisms → cellular organisms → Bacteria → Proteobacteria	1236	Open in IMG/M
3300031833\|Ga0310917_10311745	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1065	Open in IMG/M
3300031893\|Ga0318536_10655201	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	524	Open in IMG/M
3300031896\|Ga0318551_10109716	All Organisms → cellular organisms → Bacteria	1477	Open in IMG/M
3300031913\|Ga0310891_10171935	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	714	Open in IMG/M
3300031943\|Ga0310885_10906874	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	505	Open in IMG/M
3300032066\|Ga0318514_10666448	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	553	Open in IMG/M
3300032067\|Ga0318524_10653859	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	554	Open in IMG/M
3300032075\|Ga0310890_11332938	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	588	Open in IMG/M
3300032180\|Ga0307471_101175926	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	932	Open in IMG/M
3300032180\|Ga0307471_102292487	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	681	Open in IMG/M
3300032180\|Ga0307471_103586304	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	549	Open in IMG/M
3300032180\|Ga0307471_103821838	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	533	Open in IMG/M
3300032205\|Ga0307472_100571538	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	991	Open in IMG/M
3300032205\|Ga0307472_102324586	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	543	Open in IMG/M
3300033290\|Ga0318519_10835250	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	568	Open in IMG/M
3300034090\|Ga0326723_0534687	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	540	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.31%
Host-Associated	Host-Associated	15.69%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.45%
Plants	Host-Associated → Plants	15.69%
Aquatic	Environmental → Aquatic	6.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	76.47%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.76%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.92%
Sediment	Environmental → Aquatic → Sediment	2.94%
Freshwater	Environmental → Aquatic → Freshwater	1.96%
Marine	Environmental → Aquatic → Marine	1.96%
Peat	Environmental → Terrestrial → Peat	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.92%
Loam	Environmental → Terrestrial → Soil → Loam	15.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.76%
Sand	Environmental → Terrestrial → Soil → Sand	6.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.94%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.96%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.96%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.96%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	22.55%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.84%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.84%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	6.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.94%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.94%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.96%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.96%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	11.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.78%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.82%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.84%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.84%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.86%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	6.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.94%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.96%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.96%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.98%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.98%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.98%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.98%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.98%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.98%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.98%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.98%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004009	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D2	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009814	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60	Environmental	Open in IMG/M
3300009816	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10	Environmental	Open in IMG/M
3300009822	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40	Environmental	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011421	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT769_2	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300025569	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026497	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-B	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027384	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027577	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027717	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)	Host-Associated	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F101696

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1036867152	3300000955	Soil	YHVPVVPPRPALGVFFNRCENLDNIVVSWLEGAITDTEAARIIEVIRDGMGWTRTP*
Ga0055437_102804032	3300004009	Natural And Restored Wetlands	PVVPPRPGIGVFFNRCGSRNNLVVSWIEGVVSRDEAARIIEVVRDGMGWAGLP*
Ga0066680_101465432	3300005174	Soil	HAPAVLPRPGIGVFFNRCAGTNNLVTSWVDGAVTEAEVAQIVEVVRDGMEWTRVP*
Ga0066685_101475571	3300005180	Soil	VVPPRPGIGVFFNRCGGRNNLVVSWIEGVVTEPESARIIEVIREGMGWSAV*
Ga0066678_107312312	3300005181	Soil	FNRCRGRNNLVVSWIEGVVTESEAARIIDVVSEGMGWTEAS*
Ga0066676_104857531	3300005186	Soil	PRPGIGVFFNRCATRSNLVISWIEGAAAEDEVGRIVEVVREGMGWTRIP*
Ga0066388_1005039673	3300005332	Tropical Forest Soil	PVVPPRPGIGVFFNRCGGRSNVVVSWIEGVVTEVEAARIIEVVREEMGWIDAS*
Ga0066388_1028146812	3300005332	Tropical Forest Soil	RPGIGVFFNRCGNRNNLVVSWLEGVVSREDAARIIEVVRDGMGWTR*
Ga0066388_1031735842	3300005332	Tropical Forest Soil	GVFFNRCGGRNNLVVSWIEGVVSDAEATRVMEVVREGMGWSAAS*
Ga0070680_1020069411	3300005336	Corn Rhizosphere	LGVFFNRCENLDNIVVSWLEGAITDTEAARIIEVIRDGMGWTRTP*
Ga0070705_1017824911	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	RVVNAYHIPVVPPRPGLGVFFNRCGNRNNIVVSWMAGVVSRDEAARIIEVVRDGMGWKR*
Ga0066689_105535031	3300005447	Soil	VLPRPGIGVFFNRCSTRNNLVISWIDGAAREDDVTRIAEVVREGMGWAEVP*
Ga0066682_106693622	3300005450	Soil	NRCGSRSNLVVSWIEGVVSEAEVARIIELVRDGMGWTATP*
Ga0070693_1004323601	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	YHIPVVPPRPGLGVFFNRCGNRNNIVVSWMAGVVSRDEAARIIEVVRDGMGWKR*
Ga0070693_1014534671	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	GIGVFFNRCAGRNNLVVSWIEGVVSDAEAARIIEVIREGMGWTGMESPA*
Ga0066698_102049452	3300005558	Soil	PVVPPRPGIGVFFNRCGGRNNLVVSWIEGVVTDIEAARIVEVIREGMGWSGAN*
Ga0066905_1003554161	3300005713	Tropical Forest Soil	VPPRPALGVFFNRCENLDNIVVSWLEGAITDTEAARIIEVVRDGMGWTRTP*
Ga0066905_1011250362	3300005713	Tropical Forest Soil	VPPRPALGVFFNRCENLDNIVVSWLEGAITDTEAARIIEVIRAGMGWTRTP*
Ga0066905_1015728181	3300005713	Tropical Forest Soil	YHIPVVPPRPGLGVFFNRCGRRHNVVVSWMAGVASRDEVARIVEVIRDGMGWTRAA*
Ga0066903_1000310621	3300005764	Tropical Forest Soil	GVFFNRCGSRNNLVVSWIEGAVSDEDVARIIEVVRDGMGWASMS*
Ga0066903_1058614882	3300005764	Tropical Forest Soil	GLGVFFNRCGSRHNLVVSWLEGVVERDDAARIIEAVRDGMGWTRCASDD*
Ga0070716_1018286991	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	HVPVVPPRPGIGVFFNRCAGRNNLVVSWIEGVVSDAEAARIIEVIREGMGWTGMESPA*
Ga0075428_1003845792	3300006844	Populus Rhizosphere	PVVPPRPALGVFFNRCENLDNIVVSWLEGAITDTEAARIIEVIRDGMGWTRTP*
Ga0075425_1002976971	3300006854	Populus Rhizosphere	GRNNLVVSWIEGVATEGEADTIIETIRREMGWTIAP*
Ga0075425_1008414972	3300006854	Populus Rhizosphere	RPALGVFFNRCENLDNIVVSWLEGAITDTEAARIIEVIRDGMGWTRTP*
Ga0075429_1009447642	3300006880	Populus Rhizosphere	RPGIGVFFNRCAGRWNLVVSFIEGVVSEDEVARVIEIVARGMGWTRAV*
Ga0075429_1010413731	3300006880	Populus Rhizosphere	VVNGYHAPAVLPRPGVGVFFNRYGATSNLVVSWIDGVVSDDDVAQIVEVVREGMGWAKCA
Ga0075426_107831822	3300006903	Populus Rhizosphere	CGGRNNLVVSWIEGVVSEAEASRIMEVVREGMGWSAAN*
Ga0099794_103851522	3300007265	Vadose Zone Soil	VPPRPALGVFFNRCENLDNIVVSWLEGVITDTEAARIIEVIRDGMGWTRTP*
Ga0111539_110231291	3300009094	Populus Rhizosphere	PVVPPRPGVGVFFNRCGGRNNVVVSWIEGVVNEVEARRIVEVIREGMGWSTAQ*
Ga0111539_114822531	3300009094	Populus Rhizosphere	DNIVVSWLEGAITDTEAARIIEVIRDGMGWTRTP*
Ga0075418_117109691	3300009100	Populus Rhizosphere	PPRPGVGVFFNRCGGRNNVVVSWIEGVVNEVEARRIVEVIREGMGWSTAQ*
Ga0105247_102349471	3300009101	Switchgrass Rhizosphere	RCGNRNNVVVSWMEGVVSRDEAARIIEVVRDGMGWTRSR*
Ga0105092_107552712	3300009157	Freshwater Sediment	GIGVFFNRWRSNLVVSWIEGVVSEGEVTGIVEAVTEGMGWSPRL*
Ga0105082_11180022	3300009814	Groundwater Sand	GIGVFFNRCESRNNLVVSWIEGVVSDAEAARIVEVVRNGMGWTRTP*
Ga0105076_10820452	3300009816	Groundwater Sand	VFFNRCASRNNLVVSWIEGVVSDAEAARIIEVVRDGMGWTRTP*
Ga0105066_11426691	3300009822	Groundwater Sand	NRCGIRNNLVVSWIEGAVTEDEVRRVVEIVREGMGWTRAR*
Ga0105058_10603842	3300009837	Groundwater Sand	CESRNNLVVSWIEGVVSDAEAARIIEVIRDGMGWTRTP*
Ga0126384_104525172	3300010046	Tropical Forest Soil	VVPPRPALGVFFNRCENLDNIVVSWLEGAITDTEAARIIEVIRDGMGWTRTP*
Ga0126384_119969902	3300010046	Tropical Forest Soil	VVPPRPALGVFFNRCENLDNIVVSWLEGAITDTEAARIIEVVRDGMGWTRTP*
Ga0126373_127069922	3300010048	Tropical Forest Soil	ENNLVVSWLEGVVTRQEAERIIEVVRDGMGWRTAA*
Ga0126376_127307781	3300010359	Tropical Forest Soil	ALGVFLNRCENLDNMVVSWLEGAITDTEAARITEVIRDGMGWTRTP*
Ga0126377_116187351	3300010362	Tropical Forest Soil	PALGVFFNRCENLDNIVVSWLEGAITDTEAARIIEVVRDGMGWTRTP*
Ga0126377_117184892	3300010362	Tropical Forest Soil	PGVGVFFNRYGASSNLVVSWIEDVVNDDDVAQIVEVVREGMGWAKRS*
Ga0126383_101481873	3300010398	Tropical Forest Soil	PRPGIGVFFNRCGGRSNVVVSWIEGVVTEAEAARIIEVVREEMGWSVS*
Ga0134122_105185301	3300010400	Terrestrial Soil	GVFFNRCAGRNNVVVSWIDGVVSDAEAARIIEVIREGMGWLETDSQV*
Ga0137462_11523762	3300011421	Soil	FNRCGNRNNVVVSWMEGVVSRDEAARIIEVVREGMGWTR*
Ga0137377_108284442	3300012211	Vadose Zone Soil	IGVFFNRCGRRNNLVVSWIEGVVSEAEADRILEVIREAMGWSLAP*
Ga0137369_101150513	3300012355	Vadose Zone Soil	GIGVFFNRCASRNNLVVSWIEGVVSDAEAARIIEVIRDGMEWARTP*
Ga0137407_117246532	3300012930	Vadose Zone Soil	FNRCENLDNIVVSWLEGAITDTEAARIIEVIRDGMGWTRTP*
Ga0134076_101370022	3300012976	Grasslands Soil	FNRCENLDNIVVSWLEGAITDTEAARIIELIRDGMGWTRTP*
Ga0137409_101032695	3300015245	Vadose Zone Soil	IGVFFNRCGSRNNLVVSWIEGVVSETEVARIVELVRDGMGWTAAP*
Ga0132258_110213202	3300015371	Arabidopsis Rhizosphere	CAGRNNLVVSWIEGVVSDAEAARIIEVIREGMGWTGMESPGQAR*
Ga0132257_1009021762	3300015373	Arabidopsis Rhizosphere	APAVLPRPGVGVFFNRYGATSNLVVSWIDGVVSDDDVAQIVEVVREGMGWAKCA*
Ga0182032_103365692	3300016357	Soil	NRCGDLNNVVVSWIEGVATETEAQRILEVVREEMGWTVAS
Ga0182034_114947171	3300016371	Soil	GIGVFFNRCGDLNNVVVSWIEGVPIETEAQRILEVVREEVGWTVAS
Ga0182037_107686311	3300016404	Soil	GVFFNRCAGRNNLVVSWIEGVVDDAEATKVIEAIRVGMGWIESERQA
Ga0182038_112367941	3300016445	Soil	IGVFFNRCGDLNNVVVSWIEGVATETEAQRILEVVREEMGWTVAS
Ga0184640_105426101	3300018074	Groundwater Sediment	ASRNNLVVSWIEGVVSDAEAERIIEVIRDGMRWTRTP
Ga0184629_106866011	3300018084	Groundwater Sediment	RNNLVVSWIEGVVSDAEAARIIEVVRDGMGWTRTP
Ga0179594_100490092	3300020170	Vadose Zone Soil	IVPPRPALGVFFNRCENLDNIVVSWLEGAITDTEAARIIEVIRDGMGWTRTP
Ga0179596_106907602	3300021086	Vadose Zone Soil	FFNRCESRNNLVVSWIEGVVSDAEAARIIEVVRDGMGWTRTP
Ga0210377_101028493	3300021090	Groundwater Sediment	PGIGVFFNRCSTTNNLVTSWIDGAVSDDEVTRIMEVVSEGMKWTRTPGAAAP
Ga0210073_10724101	3300025569	Natural And Restored Wetlands	GSRNNLVVSWLDGVVERDDAARIIEVVRDGMGWTPQR
Ga0207653_101500711	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	VNAYHIPVVPPRPGLGVFFNRCGNRNNIVVSWMAGVVSRDEAARIIEVVRDGMGWKR
Ga0207653_103204452	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	GVFFNRCGGRNNLVVSWIEGVVSEAAADRILEVIREAMGWRVAP
Ga0207662_104811891	3300025918	Switchgrass Rhizosphere	PALGVFFNRCENLDNIVVSWLEGAITDTEAARIIEVIRDGMGWTRTP
Ga0207711_116607372	3300025941	Switchgrass Rhizosphere	YHIPVVPPRPGLGVFFNRCGNRNNVVVSWMEGVVSRDEAARIIEVVREGMGWTRSP
Ga0207711_117541131	3300025941	Switchgrass Rhizosphere	PGIGVFFNRCGNRNNVVVSWMEGVVSRDEAARIIEVVRDGMGWTRSR
Ga0207648_109241741	3300026089	Miscanthus Rhizosphere	RPGIGVFFNRCGGRNNLVVSWIEGVVSEAEADRILEVIREAMGWRVAP
Ga0209470_10260644	3300026324	Soil	GIGVFFNRCAARNNLVISWVEGAVSEKEVARIIEVVREGMEWVSIP
Ga0257164_10693362	3300026497	Soil	PVVPPRPGIGVFFNRCGGRNNLVVSWIEGVVSEVEAARIMEVIREGMGWTATC
Ga0209806_10496073	3300026529	Soil	GIGVFFNRCGGRSNLVVSWIEGVVTEAEAARIVEVIREGMGWSAAN
Ga0209058_11523001	3300026536	Soil	LPRPGIGVFFNRCAARNNLVISWIEGAVSEKEVARIIEVVREGMEWVSIP
Ga0209577_101733411	3300026552	Soil	VVPPRPGIGVFFNRCGGRSNLVVSWIEGVVTEAEAARIVEVIREGMGWSAAN
Ga0209854_10595642	3300027384	Groundwater Sand	CEGRNNLVVSWIEGVVSEAEVARIIEVVREGMGWTAAP
Ga0209854_10815511	3300027384	Groundwater Sand	VPPRPGIGVFFNRCENRNNLVVSWIEGVVSDAEAARIIEVVRDGMGWTRTP
Ga0209874_10644831	3300027577	Groundwater Sand	VVPPRPGIGVFFNRCESRNNLVVSWIEGVVSDAEAARIIEVVRDGMGWTRTP
Ga0209998_101147531	3300027717	Arabidopsis Thaliana Rhizosphere	RVVNAYHIPVVPPRPGLGVFFNRCGNRNNIVVSWMAGVVSRDEAARIIEVVRDGMGWKR
Ga0318573_106509491	3300031564	Soil	FNRCGPRENVIVSWIEGVLNEVEAARIIEVIREALGWTRTT
Ga0310813_106880921	3300031716	Soil	NRCGGRNNLVVSWIEGVVSEAEADRILEVIREAMGWRVAP
Ga0307469_102572752	3300031720	Hardwood Forest Soil	YHAPAVLPRPGIGVFFNRCATRHNLVVSWIEGAASEGDVAQIVEVVRAGMGWARTA
Ga0307468_1000838001	3300031740	Hardwood Forest Soil	RCENLDNIVVSWLEGAITDTEAARIIEVIRDGMGWTRTP
Ga0318509_106305682	3300031768	Soil	VVPPRPGIGVFFNRCAGHNNLVVSWIEGVASDAEAARIIEVIREGMGWIETQRSA
Ga0318543_102011711	3300031777	Soil	RCGGRSNVVVSWIEGVVTEVEAARIIDVVREEMGWIDAS
Ga0318567_101631731	3300031821	Soil	GIGVFFNRCAGHNNLVVSWIEGVASDAEAARIIEVIREGMGWTETAWSA
Ga0310917_103117452	3300031833	Soil	RPGIGVFFNRCGDLNNVVVSWIEGVATETEAQRILEVVREEMGWTVAS
Ga0318536_106552011	3300031893	Soil	RPGIGVFFNRCAGHNNLVVSWIEGVASDAEAARIIEVIREGMGWTETAWSA
Ga0318551_101097164	3300031896	Soil	NNLVVSWIEGVASDAEAARIIEVIREGMGWTETAWSA
Ga0310891_101719352	3300031913	Soil	PRPGVGVFFNRCGGRNNVVVSWIEGVVNEVDARRIVEVIREGMGWSTAQ
Ga0310885_109068742	3300031943	Soil	GVFFNRCGGRNNLVVSWIEGVVSEAEADRILEVIREAMGWTVAR
Ga0318514_106664482	3300032066	Soil	VPVVPPRPGIGVFFNRCGDLNNVVVSWIEGVATETEAQRILEVVREEMGWTVAS
Ga0318524_106538591	3300032067	Soil	FFNRCAGHNNLVVSWIEGVASDAEAARIIEVIREGMRWTETAWSA
Ga0310890_113329382	3300032075	Soil	PRPGIGVFFNRCGSRNNLVVSWIEGVATEGEADTIIETIRREMGWTTAP
Ga0307471_1011759261	3300032180	Hardwood Forest Soil	VFFNRCGNRNNLVVSWLEGVVSREDAARIIEVVRDAMGWSA
Ga0307471_1022924872	3300032180	Hardwood Forest Soil	PRPALGVFFNRCENLDNIVVSWLEGAITDTEASRIIEVIRDGMGWTRTA
Ga0307471_1035863041	3300032180	Hardwood Forest Soil	FFNRCWGRSNLVVSWIEGVVTEVEAARIAEVIREGMGWSAAN
Ga0307471_1038218382	3300032180	Hardwood Forest Soil	VPPRPGIGVFFNRCGSRNNIVVSWIEGVVNEGEAARIIEVVRDALGWMRTP
Ga0307472_1005715382	3300032205	Hardwood Forest Soil	LDNIVVSWLEGAITDTEAARIIEVIRGGMGWTRTP
Ga0307472_1023245862	3300032205	Hardwood Forest Soil	GVFFNRCGNRNNVVVSWMEGVVSRDEAARIIEVVREGMGWTR
Ga0318519_108352502	3300033290	Soil	PVVPPRPGIGVFFNRCAGHNNLVVSWIEGVASDAEAARIIEVIREGMRWTETAWSA
Ga0326723_0534687_431_538	3300034090	Peat Soil	GNRNNVVVSWMEGVVSRDEAARIIEVVREGMGWTR

Hidden Markov Model


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