NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F101691

Metagenome / Metatranscriptome Family F101691

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F101691
Family Type Metagenome / Metatranscriptome
Number of Sequences 102
Average Sequence Length 46 residues
Representative Sequence MVYHGRRPISADVEDTIYACKRCGAELIRTSVCKTIEPDTLRPAAA
Number of Associated Samples 77
Number of Associated Scaffolds 102

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 57.00 %
% of genes near scaffold ends (potentially truncated) 38.24 %
% of genes from short scaffolds (< 2000 bps) 82.35 %
Associated GOLD sequencing projects 71
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (50.980 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(30.392 % of family members)
Environment Ontology (ENVO) Unclassified
(32.353 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(63.725 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 36.96%    β-sheet: 0.00%    Coil/Unstructured: 63.04%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 102 Family Scaffolds
PF00857Isochorismatase 37.25
PF00135COesterase 15.69
PF07859Abhydrolase_3 5.88
PF04773FecR 1.96
PF12695Abhydrolase_5 1.96
PF02771Acyl-CoA_dh_N 0.98
PF04095NAPRTase 0.98
PF04392ABC_sub_bind 0.98
PF04199Cyclase 0.98
PF12706Lactamase_B_2 0.98
PF13193AMP-binding_C 0.98

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 102 Family Scaffolds
COG1335Nicotinamidase-related amidaseCoenzyme transport and metabolism [H] 37.25
COG1535Isochorismate hydrolaseSecondary metabolites biosynthesis, transport and catabolism [Q] 37.25
COG2272Carboxylesterase type BLipid transport and metabolism [I] 15.69
COG0657Acetyl esterase/lipaseLipid transport and metabolism [I] 5.88
COG1488Nicotinic acid phosphoribosyltransferaseCoenzyme transport and metabolism [H] 0.98
COG1878Kynurenine formamidaseAmino acid transport and metabolism [E] 0.98
COG1960Acyl-CoA dehydrogenase related to the alkylation response protein AidBLipid transport and metabolism [I] 0.98
COG2984ABC-type uncharacterized transport system, periplasmic componentGeneral function prediction only [R] 0.98


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A50.98 %
All OrganismsrootAll Organisms49.02 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001593|JGI12635J15846_10381042Not Available856Open in IMG/M
3300005363|Ga0008090_14447632Not Available601Open in IMG/M
3300005529|Ga0070741_10784589All Organisms → cellular organisms → Bacteria → Proteobacteria833Open in IMG/M
3300005538|Ga0070731_10374084Not Available947Open in IMG/M
3300005542|Ga0070732_10000233All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria40368Open in IMG/M
3300005591|Ga0070761_10043115All Organisms → cellular organisms → Bacteria → Proteobacteria2534Open in IMG/M
3300005602|Ga0070762_10014612All Organisms → cellular organisms → Bacteria → Proteobacteria4005Open in IMG/M
3300005602|Ga0070762_10119059All Organisms → cellular organisms → Bacteria → Proteobacteria1550Open in IMG/M
3300005921|Ga0070766_10080936All Organisms → cellular organisms → Bacteria → Proteobacteria1890Open in IMG/M
3300005921|Ga0070766_10104434All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1682Open in IMG/M
3300005921|Ga0070766_10195414All Organisms → cellular organisms → Bacteria → Proteobacteria1262Open in IMG/M
3300005921|Ga0070766_10275296All Organisms → cellular organisms → Bacteria1074Open in IMG/M
3300006028|Ga0070717_11578898Not Available595Open in IMG/M
3300006059|Ga0075017_101026337Not Available643Open in IMG/M
3300006059|Ga0075017_101178686Not Available599Open in IMG/M
3300006162|Ga0075030_100542636Not Available924Open in IMG/M
3300006174|Ga0075014_100078930All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1488Open in IMG/M
3300006174|Ga0075014_100156033All Organisms → cellular organisms → Bacteria → Proteobacteria1119Open in IMG/M
3300006176|Ga0070765_100324749All Organisms → cellular organisms → Bacteria → Proteobacteria1426Open in IMG/M
3300006176|Ga0070765_100494096Not Available1149Open in IMG/M
3300006176|Ga0070765_101535906Not Available626Open in IMG/M
3300006176|Ga0070765_101996369All Organisms → cellular organisms → Bacteria → Proteobacteria543Open in IMG/M
3300006354|Ga0075021_10750660All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Salmonella → Salmonella enterica629Open in IMG/M
3300009520|Ga0116214_1095699All Organisms → cellular organisms → Bacteria → Proteobacteria1091Open in IMG/M
3300009522|Ga0116218_1258427Not Available782Open in IMG/M
3300009552|Ga0116138_1121237Not Available723Open in IMG/M
3300009672|Ga0116215_1403991Not Available591Open in IMG/M
3300009839|Ga0116223_10759071Not Available555Open in IMG/M
3300010376|Ga0126381_103309699Not Available636Open in IMG/M
3300010379|Ga0136449_101293909Not Available1137Open in IMG/M
3300011270|Ga0137391_10364082All Organisms → cellular organisms → Bacteria1241Open in IMG/M
3300012363|Ga0137390_10416633All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1321Open in IMG/M
3300012677|Ga0153928_1088264Not Available595Open in IMG/M
3300012971|Ga0126369_11244931Not Available834Open in IMG/M
3300014201|Ga0181537_11193846Not Available514Open in IMG/M
3300014501|Ga0182024_10439959All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1675Open in IMG/M
3300014657|Ga0181522_10386161Not Available836Open in IMG/M
3300017938|Ga0187854_10089852All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1455Open in IMG/M
3300018019|Ga0187874_10476465Not Available501Open in IMG/M
3300018060|Ga0187765_10211112All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1126Open in IMG/M
3300018062|Ga0187784_11254429Not Available588Open in IMG/M
3300020579|Ga0210407_11417731Not Available515Open in IMG/M
3300020582|Ga0210395_10001743All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales16857Open in IMG/M
3300020582|Ga0210395_10003243All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales12496Open in IMG/M
3300020582|Ga0210395_10552200Not Available866Open in IMG/M
3300020582|Ga0210395_11388010Not Available513Open in IMG/M
3300021168|Ga0210406_10144166All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2002Open in IMG/M
3300021171|Ga0210405_10051923All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3243Open in IMG/M
3300021171|Ga0210405_11266653Not Available543Open in IMG/M
3300021178|Ga0210408_10000154All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales108541Open in IMG/M
3300021178|Ga0210408_10020841All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales5241Open in IMG/M
3300021181|Ga0210388_10575854All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales986Open in IMG/M
3300021181|Ga0210388_11214164All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Salmonella → Salmonella enterica639Open in IMG/M
3300021401|Ga0210393_10523649All Organisms → cellular organisms → Bacteria → Proteobacteria968Open in IMG/M
3300021402|Ga0210385_10000097All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales97850Open in IMG/M
3300021403|Ga0210397_11240819Not Available579Open in IMG/M
3300021404|Ga0210389_11079895Not Available621Open in IMG/M
3300021420|Ga0210394_10045750All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3841Open in IMG/M
3300021420|Ga0210394_10380976Not Available1240Open in IMG/M
3300021420|Ga0210394_10539405Not Available1026Open in IMG/M
3300021420|Ga0210394_11343120Not Available609Open in IMG/M
3300021420|Ga0210394_11417233Not Available590Open in IMG/M
3300021475|Ga0210392_10911857Not Available657Open in IMG/M
3300021477|Ga0210398_10659835Not Available847Open in IMG/M
3300021479|Ga0210410_10025330All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales5126Open in IMG/M
3300022557|Ga0212123_10289445All Organisms → cellular organisms → Bacteria → Proteobacteria1151Open in IMG/M
3300022557|Ga0212123_10398654All Organisms → cellular organisms → Bacteria → Proteobacteria923Open in IMG/M
3300027497|Ga0208199_1074411Not Available712Open in IMG/M
3300027583|Ga0209527_1014971All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1680Open in IMG/M
3300027629|Ga0209422_1020801All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1630Open in IMG/M
3300027696|Ga0208696_1217662Not Available601Open in IMG/M
3300027842|Ga0209580_10000005All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales643040Open in IMG/M
3300027869|Ga0209579_10058623All Organisms → cellular organisms → Bacteria → Proteobacteria2041Open in IMG/M
3300027889|Ga0209380_10598554Not Available639Open in IMG/M
3300027895|Ga0209624_10177734All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1411Open in IMG/M
3300027908|Ga0209006_11196502Not Available594Open in IMG/M
3300030707|Ga0310038_10366032Not Available634Open in IMG/M
3300030763|Ga0265763_1002934All Organisms → cellular organisms → Bacteria → Proteobacteria1330Open in IMG/M
3300030862|Ga0265753_1011146All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1184Open in IMG/M
3300031090|Ga0265760_10165288Not Available732Open in IMG/M
3300031122|Ga0170822_12609947Not Available655Open in IMG/M
3300031122|Ga0170822_14775010Not Available523Open in IMG/M
3300031128|Ga0170823_13756729Not Available659Open in IMG/M
3300031524|Ga0302320_11678868Not Available613Open in IMG/M
3300031544|Ga0318534_10472494Not Available717Open in IMG/M
3300031679|Ga0318561_10380081Not Available775Open in IMG/M
3300031708|Ga0310686_100686347All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3554Open in IMG/M
3300031715|Ga0307476_10000822All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales21287Open in IMG/M
3300031715|Ga0307476_10281863All Organisms → cellular organisms → Bacteria → Proteobacteria1217Open in IMG/M
3300031771|Ga0318546_11033886Not Available578Open in IMG/M
3300031780|Ga0318508_1086106All Organisms → cellular organisms → Bacteria864Open in IMG/M
3300031781|Ga0318547_10124896All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1495Open in IMG/M
3300031831|Ga0318564_10217145All Organisms → cellular organisms → Bacteria850Open in IMG/M
3300031890|Ga0306925_11565075Not Available642Open in IMG/M
3300032041|Ga0318549_10094102All Organisms → cellular organisms → Bacteria1300Open in IMG/M
3300032160|Ga0311301_10635307All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1525Open in IMG/M
3300032160|Ga0311301_11264512Not Available937Open in IMG/M
3300032783|Ga0335079_10466842All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1351Open in IMG/M
3300032783|Ga0335079_12055337Not Available549Open in IMG/M
3300033158|Ga0335077_11356516Not Available688Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil30.39%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil11.76%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil9.80%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds5.88%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil4.90%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil4.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.92%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil3.92%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil2.94%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland2.94%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland1.96%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog1.96%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring1.96%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil1.96%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.96%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.96%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland0.98%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.98%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost0.98%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.98%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog0.98%
Attine Ant Fungus GardensHost-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens0.98%
Tropical Rainforest SoilEnvironmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil0.98%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300005363Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005538Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1EnvironmentalOpen in IMG/M
3300005542Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1EnvironmentalOpen in IMG/M
3300005591Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1EnvironmentalOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006162Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012EnvironmentalOpen in IMG/M
3300006174Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014EnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006354Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012EnvironmentalOpen in IMG/M
3300009520Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaGEnvironmentalOpen in IMG/M
3300009522Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaGEnvironmentalOpen in IMG/M
3300009552Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150EnvironmentalOpen in IMG/M
3300009672Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaGEnvironmentalOpen in IMG/M
3300009839Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaGEnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012677Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ012 MetaGHost-AssociatedOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300014201Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaGEnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014657Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaGEnvironmentalOpen in IMG/M
3300017938Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150EnvironmentalOpen in IMG/M
3300017972Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300018019Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150EnvironmentalOpen in IMG/M
3300018060Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MGEnvironmentalOpen in IMG/M
3300018062Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020582Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-OEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021402Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-OEnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021404Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021475Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-OEnvironmentalOpen in IMG/M
3300021477Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-OEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300022557Paint Pots_combined assemblyEnvironmentalOpen in IMG/M
3300027497Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027583Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027629Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027696Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027842Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027869Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027889Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)EnvironmentalOpen in IMG/M
3300027895Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300030707Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)EnvironmentalOpen in IMG/M
3300030763Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030862Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031090Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031122Oak Spring Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031128Oak Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031524Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3EnvironmentalOpen in IMG/M
3300031544Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26EnvironmentalOpen in IMG/M
3300031679Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031715Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05EnvironmentalOpen in IMG/M
3300031771Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19EnvironmentalOpen in IMG/M
3300031780Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21EnvironmentalOpen in IMG/M
3300031781Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20EnvironmentalOpen in IMG/M
3300031831Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300032041Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032783Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12635J15846_1038104213300001593Forest SoilMVYHGRRPIAADVEDTIYACKRCGAELIRTSVCKTTTIEPDKRPAAA*
Ga0008090_1444763223300005363Tropical Rainforest SoilMMPCPVCAGRMVYHGRRVIAADVEDTIYACKRCGAELIRTSVCKAPDPDTLRPAAA*
Ga0070741_1078458923300005529Surface SoilMMPCPVCAGRMAYHGRRPISADIEDTVYACKSCGAEVVRTSVRHAEPGTTRPAAA*
Ga0070731_1037408413300005538Surface SoilMVYHGRRPISADVEDTIYACKRCGAELIRTSVCKTIEPDTLRPAAA*
Ga0070732_10000233233300005542Surface SoilMMPCPVCAGRMVYHGRRPIAADVEDTVYACKRCGAELIRTSVRKTPIGPDTLRPAAA*
Ga0070761_1004311533300005591SoilMVYHGRRPISADVEDTIYACKRCGAELIRTSVCKTIEPNTLRPAAA*
Ga0070762_1001461233300005602SoilMMPCPVCAGRMVYHGRRPISADVEDTVYACKRCGAELIRTSVCKTTDPDTRRPAAA*
Ga0070762_1011905923300005602SoilMMPCPVCAGRMVYHGRRPISADVEDTIYACKRCGAELIRTSVCKTIEPDKLRPAAA*
Ga0070766_1008093633300005921SoilMVYHGRRPISADVEDTIYACKRCGAELIRTSVCKTTTIGPDTRPAAA*
Ga0070766_1010443433300005921SoilMMPCPVCAGRMVYHGRRPISADVEDTIYACKRCGAELIRTSVCKTIEPDTLRPAAA*
Ga0070766_1019541423300005921SoilMMPCPVCAGRMVYHGRRPISADVEDTIYACKRCGAELIRTSVCKTIEPNTLRPAAA*
Ga0070766_1027529623300005921SoilDVEDTIYACKRCGAELIRTSVCKTIEPDTQRPAAA*
Ga0070717_1157889823300006028Corn, Switchgrass And Miscanthus RhizosphereRRPISADVEDTIYACKRCGAELIRTSVCKTIEPDKLRPAAA*
Ga0075017_10102633713300006059WatershedsMVYHGRRPIAADVEDTIYACKRCGAELIRTSVCKTIEPDTRRPAAA*
Ga0075017_10117868613300006059WatershedsDVEDTIYACKRCGAELIRTSVCKTTIEPDKRPAAA*
Ga0075030_10054263623300006162WatershedsMMPCPVCAGRMVYHGRRPIAADVEDTIYACKRCGAELIRTSVCKTIEPDTLRPAAA*
Ga0075014_10007893013300006174WatershedsVYHGRRPISSDVEDTIYACKRCGAELIRTSVCKTTIEPDKRPAAA*
Ga0075014_10015603323300006174WatershedsMVYHGRRPISSDVEDTIYACKRCGAELIRTSVCKTIEPNTLRPAAA*
Ga0070765_10032474923300006176SoilMVYHGRRPISADVEDTIYACKRCGAELIRTSVCKTMEPNTRRPAAA*
Ga0070765_10049409623300006176SoilMVYHGRRPISADVEDTIYACKRCGAELIRTSMCKTIEPDTRRPAAA*
Ga0070765_10153590623300006176SoilMVYHGRRPISADVEDTIYACKRCGAELIRTSVCKTTIEPDTLRPAAA*
Ga0070765_10199636913300006176SoilRMAYHGRRAISADIEDTVYACKRCGAELIRTAMRQQAEPGTPRPAAA*
Ga0075021_1075066013300006354WatershedsMVYHGRRPISSDVEDTIYACKRCGAELIRTSVCKTIEPDTLRPAAA*
Ga0116214_109569923300009520Peatlands SoilMVYHGRRPISADVEDTIYACKRCGAELIRTSVCKTTTIEPDTRPAAA*
Ga0116218_125842713300009522Peatlands SoilMVYHGRRPISADVEDTIYACKRCGAELIRTSVCKTTTIEPD
Ga0116138_112123713300009552PeatlandMVYHGRRPISADVEDTIHACKRCCAELLRTSVCKTTTIEPDTRP
Ga0116215_140399113300009672Peatlands SoilMVYNGRRPISADVEDTIYACKRCGAELIRTSVCSTIEPDTLRPAAA*
Ga0116223_1075907123300009839Peatlands SoilVCAGRMVYHGRRPISADVEDTIYACKRCGAELIRTSVCKTIEPDTLRPAAA*
Ga0126381_10330969933300010376Tropical Forest SoilMVYHGRRVIAADVEDTIYACKRCGAELIRTSVCKAPDPDTLRPAAA*
Ga0136449_10129390913300010379Peatlands SoilMVYHGRRPISADVEDTIYACKRCGAELIRTSVCKTIEPDKLRPAAA*
Ga0137391_1036408223300011270Vadose Zone SoilMVYHGRRPIAADVEDTVYACKRCGAELIRTSVCKTIEPDTLRPAAA*
Ga0137390_1041663323300012363Vadose Zone SoilMVYHGRRPIAADVEDTVYACKRCGAELIRTSVCKTMEPDTLRPAAA*
Ga0153928_108826423300012677Attine Ant Fungus GardensMVYHGRRPIAADVEDTVYACKRCGAELIRTSVCKTTGPATRPEAA*
Ga0126369_1124493113300012971Tropical Forest SoilMVYHGRRVIAADIEDTIYACKRCGAELIRTSVCKAPDPDTLRPAAA*
Ga0181537_1119384623300014201BogMVYHGRRPISGDIEDTIYACKRCGAELIRTSARQTTADAGTRRPAAA*
Ga0182024_1043995923300014501PermafrostMVFHGRRTVAPDVEDTVFACRRCGAELIRTSVLKTKPDPDTKPTAAAA*
Ga0181522_1038616123300014657BogCAGRMVYHGRRPIAADVEDTIYACKRCGAELIRTSVCKTIEPDTRRPAAA*
Ga0187854_1008985233300017938PeatlandMVYHGRRPISADVEDTIYACKRCGAELIRTSVCKTTTIEPDTRPAAA
Ga0187781_1127983413300017972Tropical PeatlandRMVYRASRMISADVEDTVYACKNCGAELVRTSVRKVTKAEAA
Ga0187874_1047646523300018019PeatlandGRRPISADVEDTIYACKRCGAELIRTSVCKTTTIEPDTRPAAA
Ga0187765_1021111223300018060Tropical PeatlandMMPCPVCAGRMVYHGRRVIAADVEDTIYACKRCGAELIRTSVCKAPDPDTLRPAAA
Ga0187784_1125442923300018062Tropical PeatlandMAYHGRRQIAADVEDTIYACKRCGAELIRTSVCRDSDGDKRRPAAAA
Ga0210407_1141773123300020579SoilMVYHGRRPIAADVEDTVYACKRCGAELIRTSVCKTIDPDTLRPAAA
Ga0210395_1000174353300020582SoilMVYHGRRPISADVEDTIYACKRCGAELIRTSVCKTTTIGPDTRPAAA
Ga0210395_1000324383300020582SoilMVYHGRRPISADVEDTIYACKRCGAELIRTSVCKTTIEPDTLRPAAA
Ga0210395_1055220023300020582SoilMMPCPVCAGRMVYHGRRPIAADVEDTVYACRRCGAELIRTSVRKAIEPDTLRPAAA
Ga0210395_1138801023300020582SoilMMPCPVCAGRMAYHGRRAISADIEDTVYACKSCGAELIRTSMRQQAEPGTTRPAAA
Ga0210406_1014416623300021168SoilMVYHGRRPISADVEDTIYACKRCGAELIRTSVCKTIDPDTRRPAAA
Ga0210405_1005192353300021171SoilMVYHGRRPIAADVEDTIYACKRCGAELIRTSVCKTIDPDTRRPAAA
Ga0210405_1126665313300021171SoilMVYHGRRPISTDVEDTIYACKRCGAELIRTSVCKTIEPNTLRPAAA
Ga0210408_10000154503300021178SoilMVYHGRRPIAADVEDTVYACKRCGAELIRTSVCKTPTGPGTLRPAAA
Ga0210408_1002084133300021178SoilMVYHGRRPISADVEDTVYACKRCGAELIRTSVCKTIDPDTRRPAAA
Ga0210388_1057585423300021181SoilMVYHGRRPISADVEDTIYACKRCGAELIRTSVCKTIEPDTLRPAAA
Ga0210388_1121416413300021181SoilMVYHGRRPISADVEDTIYACKRCGAELIRTSVCKTMEPNTRRPAAA
Ga0210393_1052364913300021401SoilMPCPVCAGRMVYHGRRPISADVEDTIYACKRCGAELIRTSVCKTIEPDKLRPAAA
Ga0210385_10000097343300021402SoilMVYHGRRPIAADVEDTIYACKRCGAELIRTSVCKTIEPDTRRPAAA
Ga0210397_1124081923300021403SoilMVYHGRRPISADVEDTIYACKRCGAELIRTSVCKTIEPDKLRPAAA
Ga0210389_1107989513300021404SoilDVEDTVYACKRCGAELIRTSVCKTIDPDTLRPAAA
Ga0210394_1004575033300021420SoilMVYHGRRPISADVEDTIYACKRCGAELIRTSVCKTIEPDTRRPAAA
Ga0210394_1038097633300021420SoilMVYHGRRPISADVEDTVYACKRCGAELIRTSVCKTIDPDTLRPAAA
Ga0210394_1053940523300021420SoilHGRRPISADVEDTIYACKRCGAELIRTSVCKTIEPNTLRPAAA
Ga0210394_1134312013300021420SoilISADVEDTIYACKRCGAELIRTSVCKTIEPDTLRPAAA
Ga0210394_1141723313300021420SoilMVYHGRRPISSDVEDTVYACRRCGAELIRTSVCKTIEPDTLRPAA
Ga0210392_1091185723300021475SoilMVYHGRRPIAADVEDTIYACKRCGAELIRTSVCKTVEPDTRRPAAA
Ga0210398_1065983523300021477SoilMVYHGRRPIAADVEDTIYACKRCGAELIRTSVCKTIE
Ga0210410_1002533043300021479SoilMVYHGRRPISADVEDTIYACKRCGAELIRTSVCKTIEPNTQRPAAA
Ga0212123_1028944523300022557Iron-Sulfur Acid SpringMVYHGRRPISADVEDTIYACKRCGAELIRTSVCKTIEPNTLRPAAA
Ga0212123_1039865423300022557Iron-Sulfur Acid SpringVYHGRRPISADVEDTIYACKRCGAELIRTSVCKTMEPDTLRPAAA
Ga0208199_107441113300027497Peatlands SoilVEDTIYACKRCGAELIRTSVCKTTTIEPDTRPAAA
Ga0209527_101497123300027583Forest SoilMVYHGRRPIAADVEDTVYACKRCGAELIRTSVCKAADPDTLRPAAA
Ga0209422_102080113300027629Forest SoilGRRPIAADVEDTVYACKRCGAELIRTSVCKTVDPDTLRPAAA
Ga0208696_121766223300027696Peatlands SoilVYHGRRPISADVEDTIYACKRCGAELIRTSVCKTIEPDTLRPAAA
Ga0209580_10000005223300027842Surface SoilMMPCPVCAGRMVYHGRRPIAADVEDTVYACKRCGAELIRTSVRKTPIGPDTLRPAAA
Ga0209579_1005862323300027869Surface SoilMVYHGRRPISADVEDTIYACKRCGAELIRTSVCKTTIEPNTRPAAA
Ga0209380_1059855413300027889SoilADVEDTIYACKRCGAELIRTSVCKTIEPDTQRPAAA
Ga0209624_1017773423300027895Forest SoilMMPCPVCAGRMVYHGRRPIAADVEDTVYACRRCGAELIRTSVRKAVEPGTLRPEAA
Ga0209006_1119650213300027908Forest SoilMVYHGRRPISADVEDTIYACKRCGAELIRTSVCKTIDPDTRRPAA
Ga0310038_1036603213300030707Peatlands SoilVYHGRRPISADVEDTIYACKRCGAELIRTSVCKTTTIEPDTRPAAA
Ga0265763_100293423300030763SoilMVYHGRRPISADVEDTIYACKRCGAELIRTSVCKAIDPDTLRPAAA
Ga0265753_101114623300030862SoilMVYHGRRPIAADVEDTVYACRRCGAELIRTSVCKATGPQTRPEAA
Ga0265760_1016528813300031090SoilMVYHGRRPISSDVEDTIYACKRCGAELIRTSVCKTIEPDTLRPAAA
Ga0170822_1260994723300031122Forest SoilCAGRMVYHGRRPISADVEDTIYACKRCGAELIRTSVCKTIDPDTLRPAAA
Ga0170822_1477501023300031122Forest SoilMVYHGRRPISSDVEDTIYACKRCGADLIRTSVCKTIEPD
Ga0170823_1375672923300031128Forest SoilMVYHGRRPISADVEDTIYACKRCGAELIRTSVCKTIDPDTLR
Ga0302320_1167886813300031524BogRMVYSGRRPVAPDIEDTIYACKRCGAELIRTSARQTADAETRRPAAA
Ga0318534_1047249413300031544SoilMVYHGRRVIAADVEDTIYACKRCGAELIRTSVCKTPDPDTLRPAAA
Ga0318561_1038008123300031679SoilMVYHGRRVIAADVEDTIYACKRCGAELIRTSVCKAPDPDTLRPAAA
Ga0310686_10068634733300031708SoilMVYHGRRPISGDIEDTVYACKRCGAELIRTSVRQASHTGTPRPAAA
Ga0307476_10000822213300031715Hardwood Forest SoilMVYHGRRPIAADVEDTVYACKRCGAELIRTSVCKTVDPNTLRPAAA
Ga0307476_1028186313300031715Hardwood Forest SoilMVYHGRRPIAADVEDTVYACKRCGAELIRTSVCKTVD
Ga0318546_1103388623300031771SoilLMMPCPVCAGRMVYHGRRPISADVEDTVYACKRCGAELVRTSVCKSNNPRPAAA
Ga0318508_108610613300031780SoilCPVCAGRMVYHGRRVIAADVEDTIYACKRCGAELIRTSVCKTPDPDTLRPAAA
Ga0318547_1012489633300031781SoilLMMPCPVCAGRMVYHGRRVIAADVEDTIYACKRCGAELIRTSVCKTPDPDTLRPAAA
Ga0318564_1021714513300031831SoilHGRRVIAADVEDTIYACKRCGAELIRTSVCKAPDPDTLRPAAA
Ga0306925_1156507513300031890SoilCAGRMVYHGRRVIAADVEDTIYACKRCGAELIRTSVCKAPDPDTLRPAAA
Ga0318549_1009410233300032041SoilMVYHGRRVIAADVEDTIYACKRCGAELIRTSVCKASDPDTLRPAAA
Ga0311301_1063530723300032160Peatlands SoilMVYHGRRPISADVEDTIYACKRCGAELIRTSVCKTVEPDTLRPAAA
Ga0311301_1126451213300032160Peatlands SoilMVYHGRRPISADVEDTIYACKRCGAELIRTSVCSTIEPDTLRPAAA
Ga0335079_1046684213300032783SoilMVYHGRRPISADVEDTIYACKRCGAELIRTSVCKTIDPDTLRPAAA
Ga0335079_1205533713300032783SoilGRMVYHGRRPISADVEDTVYACKRCGAELIRTSVCKPTREPDTRPAAA
Ga0335077_1039857733300033158SoilMVYHGRRPISADVEDTIYACKRCGAELIRTSVCKP
Ga0335077_1135651623300033158SoilPISAEVEDTIYACKRCGAELIRTSVCKTIDPDTRRPAAA


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