NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F101646

Metagenome / Metatranscriptome Family F101646

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F101646
Family Type Metagenome / Metatranscriptome
Number of Sequences 102
Average Sequence Length 131 residues
Representative Sequence MPNLLKVVCAAALTSGMAGCHHSGNISTSDAAQDEFVQAFLTAHDKQDLDAEEKLVDWDDVTESSRNHFIGELKSGLDVKITAKIESMPAVPPNFSARYNIPPEKFLVVVYDDPRGAITVKFPIAKKDGRYYFALRKE
Number of Associated Samples 79
Number of Associated Scaffolds 102

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 54.00 %
% of genes near scaffold ends (potentially truncated) 46.08 %
% of genes from short scaffolds (< 2000 bps) 83.33 %
Associated GOLD sequencing projects 67
AlphaFold2 3D model prediction Yes
3D model pTM-score0.69

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (51.961 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(41.176 % of family members)
Environment Ontology (ENVO) Unclassified
(41.176 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(67.647 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 21.69%    β-sheet: 21.69%    Coil/Unstructured: 56.63%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.69
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 102 Family Scaffolds
PF00903Glyoxalase 3.92
PF07690MFS_1 2.94
PF00072Response_reg 1.96
PF00533BRCT 1.96
PF07238PilZ 1.96
PF00999Na_H_Exchanger 1.96
PF12704MacB_PCD 1.96
PF12867DinB_2 0.98
PF02894GFO_IDH_MocA_C 0.98
PF12826HHH_2 0.98
PF03372Exo_endo_phos 0.98
PF00589Phage_integrase 0.98
PF08327AHSA1 0.98
PF13620CarboxypepD_reg 0.98
PF00535Glycos_transf_2 0.98
PF04055Radical_SAM 0.98
PF02878PGM_PMM_I 0.98
PF13432TPR_16 0.98
PF00873ACR_tran 0.98
PF07729FCD 0.98
PF14520HHH_5 0.98

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 102 Family Scaffolds
COG0025NhaP-type Na+/H+ or K+/H+ antiporterInorganic ion transport and metabolism [P] 1.96
COG0475Kef-type K+ transport system, membrane component KefBInorganic ion transport and metabolism [P] 1.96
COG3004Na+/H+ antiporter NhaAEnergy production and conversion [C] 1.96
COG3263NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domainsEnergy production and conversion [C] 1.96
COG4651Predicted Kef-type K+ transport protein, K+/H+ antiporter domainInorganic ion transport and metabolism [P] 1.96
COG0033Phosphoglucomutase/phosphomannomutaseCarbohydrate transport and metabolism [G] 0.98
COG0673Predicted dehydrogenaseGeneral function prediction only [R] 0.98
COG1109PhosphomannomutaseCarbohydrate transport and metabolism [G] 0.98
COG1802DNA-binding transcriptional regulator, GntR familyTranscription [K] 0.98
COG2186DNA-binding transcriptional regulator, FadR familyTranscription [K] 0.98


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A51.96 %
All OrganismsrootAll Organisms48.04 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002245|JGIcombinedJ26739_100269267All Organisms → cellular organisms → Bacteria1590Open in IMG/M
3300004479|Ga0062595_100258466All Organisms → cellular organisms → Bacteria → Acidobacteria1136Open in IMG/M
3300005334|Ga0068869_100751544Not Available835Open in IMG/M
3300005341|Ga0070691_10513764Not Available694Open in IMG/M
3300005353|Ga0070669_101334897Not Available621Open in IMG/M
3300005434|Ga0070709_11221978All Organisms → cellular organisms → Bacteria → Acidobacteria604Open in IMG/M
3300005436|Ga0070713_100007611All Organisms → cellular organisms → Bacteria7621Open in IMG/M
3300005439|Ga0070711_101617825Not Available567Open in IMG/M
3300005445|Ga0070708_100369165All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. MEA3-11353Open in IMG/M
3300005467|Ga0070706_100760570Not Available897Open in IMG/M
3300005536|Ga0070697_101213995Not Available672Open in IMG/M
3300005544|Ga0070686_100043442All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2820Open in IMG/M
3300005545|Ga0070695_100756668All Organisms → cellular organisms → Bacteria → Acidobacteria775Open in IMG/M
3300005547|Ga0070693_100017695All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3711Open in IMG/M
3300005618|Ga0068864_102244753Not Available552Open in IMG/M
3300006028|Ga0070717_11094381Not Available726Open in IMG/M
3300006175|Ga0070712_100242706All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → Cupriavidus taiwanensis1436Open in IMG/M
3300006854|Ga0075425_101570415Not Available742Open in IMG/M
3300007265|Ga0099794_10112251All Organisms → cellular organisms → Bacteria1366Open in IMG/M
3300007788|Ga0099795_10114332All Organisms → cellular organisms → Bacteria1073Open in IMG/M
3300009098|Ga0105245_10424557Not Available1333Open in IMG/M
3300009101|Ga0105247_10034296All Organisms → cellular organisms → Bacteria → Acidobacteria3091Open in IMG/M
3300009143|Ga0099792_10527585Not Available743Open in IMG/M
3300010159|Ga0099796_10013595All Organisms → cellular organisms → Bacteria2329Open in IMG/M
3300010159|Ga0099796_10364626Not Available626Open in IMG/M
3300010159|Ga0099796_10463922Not Available565Open in IMG/M
3300010403|Ga0134123_10608534Not Available1052Open in IMG/M
3300012202|Ga0137363_10026179All Organisms → cellular organisms → Bacteria → Acidobacteria3979Open in IMG/M
3300012202|Ga0137363_10202902All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1592Open in IMG/M
3300012205|Ga0137362_10408640All Organisms → cellular organisms → Bacteria1176Open in IMG/M
3300012205|Ga0137362_11458046Not Available571Open in IMG/M
3300012205|Ga0137362_11638832All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium530Open in IMG/M
3300012361|Ga0137360_10145930Not Available1870Open in IMG/M
3300012361|Ga0137360_10708316All Organisms → cellular organisms → Bacteria865Open in IMG/M
3300012582|Ga0137358_10405921Not Available921Open in IMG/M
3300012582|Ga0137358_10968757Not Available553Open in IMG/M
3300012683|Ga0137398_10220567Not Available1256Open in IMG/M
3300012685|Ga0137397_10681945Not Available764Open in IMG/M
3300012917|Ga0137395_10021111All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium3790Open in IMG/M
3300012917|Ga0137395_11280711Not Available508Open in IMG/M
3300012918|Ga0137396_10810477Not Available688Open in IMG/M
3300012923|Ga0137359_10013441All Organisms → cellular organisms → Bacteria → Acidobacteria6864Open in IMG/M
3300012923|Ga0137359_11335396Not Available605Open in IMG/M
3300012924|Ga0137413_10210079All Organisms → cellular organisms → Bacteria1314Open in IMG/M
3300012927|Ga0137416_10209284Not Available1570Open in IMG/M
3300012927|Ga0137416_10254598All Organisms → cellular organisms → Bacteria → Acidobacteria1436Open in IMG/M
3300012957|Ga0164303_11245603Not Available547Open in IMG/M
3300012961|Ga0164302_10605717Not Available795Open in IMG/M
3300015051|Ga0137414_1147329Not Available997Open in IMG/M
3300015241|Ga0137418_10672863All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium799Open in IMG/M
3300015242|Ga0137412_10022050All Organisms → cellular organisms → Bacteria5195Open in IMG/M
3300015245|Ga0137409_10508819All Organisms → cellular organisms → Bacteria → Acidobacteria1028Open in IMG/M
3300018468|Ga0066662_10471856All Organisms → cellular organisms → Bacteria1132Open in IMG/M
3300020170|Ga0179594_10174605All Organisms → cellular organisms → Bacteria → Proteobacteria800Open in IMG/M
3300020199|Ga0179592_10063312Not Available1689Open in IMG/M
3300020199|Ga0179592_10504330Not Available518Open in IMG/M
3300020579|Ga0210407_10533968All Organisms → cellular organisms → Bacteria916Open in IMG/M
3300020583|Ga0210401_10406809All Organisms → cellular organisms → Bacteria1223Open in IMG/M
3300020583|Ga0210401_11447831Not Available544Open in IMG/M
3300021088|Ga0210404_10631792Not Available609Open in IMG/M
3300021168|Ga0210406_11195204Not Available554Open in IMG/M
3300021170|Ga0210400_10000397All Organisms → cellular organisms → Bacteria49724Open in IMG/M
3300021171|Ga0210405_10067052All Organisms → cellular organisms → Bacteria2832Open in IMG/M
3300021180|Ga0210396_10306706Not Available1405Open in IMG/M
3300021404|Ga0210389_10652283Not Available826Open in IMG/M
3300021432|Ga0210384_11799702Not Available518Open in IMG/M
3300021474|Ga0210390_11015715Not Available677Open in IMG/M
3300021559|Ga0210409_11655399Not Available516Open in IMG/M
3300025900|Ga0207710_10428093Not Available681Open in IMG/M
3300025906|Ga0207699_11201104All Organisms → cellular organisms → Bacteria562Open in IMG/M
3300025910|Ga0207684_10544936All Organisms → cellular organisms → Bacteria993Open in IMG/M
3300025927|Ga0207687_11566049Not Available566Open in IMG/M
3300025928|Ga0207700_10160124All Organisms → cellular organisms → Bacteria1868Open in IMG/M
3300025928|Ga0207700_10678885Not Available919Open in IMG/M
3300025934|Ga0207686_10447825All Organisms → cellular organisms → Bacteria993Open in IMG/M
3300025939|Ga0207665_10841187Not Available726Open in IMG/M
3300025939|Ga0207665_11056619All Organisms → cellular organisms → Bacteria647Open in IMG/M
3300026285|Ga0209438_1093455All Organisms → cellular organisms → Bacteria → Acidobacteria933Open in IMG/M
3300026557|Ga0179587_10095558All Organisms → cellular organisms → Bacteria1791Open in IMG/M
3300026557|Ga0179587_10200445All Organisms → cellular organisms → Bacteria1264Open in IMG/M
3300027512|Ga0209179_1011001All Organisms → cellular organisms → Bacteria → Acidobacteria1592Open in IMG/M
3300027512|Ga0209179_1016150Not Available1397Open in IMG/M
3300027671|Ga0209588_1084436Not Available1025Open in IMG/M
3300027903|Ga0209488_10024168All Organisms → cellular organisms → Bacteria4415Open in IMG/M
3300027903|Ga0209488_10320830All Organisms → cellular organisms → Bacteria1155Open in IMG/M
3300028536|Ga0137415_10645382All Organisms → cellular organisms → Bacteria → Acidobacteria870Open in IMG/M
3300029636|Ga0222749_10603841Not Available599Open in IMG/M
3300030935|Ga0075401_11543391Not Available561Open in IMG/M
3300031057|Ga0170834_108714084All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2862Open in IMG/M
3300031057|Ga0170834_109476209Not Available553Open in IMG/M
3300031231|Ga0170824_122760665Not Available527Open in IMG/M
3300031720|Ga0307469_10095076All Organisms → cellular organisms → Bacteria2072Open in IMG/M
3300031720|Ga0307469_10348810All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1242Open in IMG/M
3300031720|Ga0307469_10616854Not Available972Open in IMG/M
3300031740|Ga0307468_101406281Not Available641Open in IMG/M
3300031740|Ga0307468_101976876Not Available558Open in IMG/M
3300031754|Ga0307475_10164383All Organisms → cellular organisms → Bacteria → Acidobacteria1767Open in IMG/M
3300031962|Ga0307479_10106468All Organisms → cellular organisms → Bacteria2727Open in IMG/M
3300032180|Ga0307471_100344893All Organisms → cellular organisms → Bacteria1597Open in IMG/M
3300032205|Ga0307472_102033781Not Available576Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil41.18%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere16.67%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil13.73%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil8.82%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil2.94%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.96%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.96%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.96%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.98%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.98%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.98%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.98%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.98%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.98%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.98%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.98%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300007788Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2EnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300010159Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300015051Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015242Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300020170Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300020199Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021404Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-OEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021474Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-OEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300025900Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026285Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027512Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes)EnvironmentalOpen in IMG/M
3300027671Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300029636Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030935Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA7 SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGIcombinedJ26739_10026926733300002245Forest SoilLIGGDEMPSPRLLFNVLLTVAMSSGMVGCQRSGNVPTSDPAQDEFVQAFLTAHDKKDQDAEEKLVDWDDVTESSRNHFIGELRSGLNVKITAKIESMPGMPPDFSARYNIPPEKFLVVVYEDPRGAITVKFPIAKKEGRYYFALRKE*
Ga0062595_10025846623300004479SoilVTKAGLVFTVVYTVALISGLGGCKRAEKAAIAEGAEAEFVQAFLTAHDHKDLDAEEKLVYWDNVTESSRNHFIGELKSGLDVKITAKVEDLPAVPAGFSERYNIAPKKFLTVVYDDPRGAITVKFPIAKKDGRYYFALRKE*
Ga0068869_10075154413300005334Miscanthus RhizosphereMSRSCYLLQVLCTVALTSGTAGCHHSGNPTPSEAGGTSIDPAEHEFVQAFLTAHDKKDLDAEEKLVDWDDVTDSSRNHFIGELKSGLGVKITAKTESMPAVPPGFSALYNIPPEKFLEVLYDDSRGVITVKFPIAKKDGRYYFAMRKQ*
Ga0070691_1051376423300005341Corn, Switchgrass And Miscanthus RhizosphereGNPTPSEAGGTSIDPAEHEFVQAFLTAHDKKDLDAEEKLVDWDDVTDSSRNHFIGELKSGLGVKITAKTESMPAVPPGFSALYNIPPEKFLEVLYDDSRGVITVKFPIAKKDGRYYFAMRKQ*
Ga0070669_10133489713300005353Switchgrass RhizosphereNPTPSEAGGTSIDPAEHEFVQAFLTAHDKKDLDAEEKLVDWDDVTDSSRNHFIGELKSGLGVKITAKTESMPAVPPGFSALYNIPPEKFLVVLYDDSRGVITVKFPIAKKDGRYYFAMRKQ*
Ga0070709_1122197813300005434Corn, Switchgrass And Miscanthus RhizosphereEGKASVGEGAEGEFVQAFLTAHDNKDLDGEEKLVDWDNVSESSRNHFIGELKSGLGVKITAKVEEMPAVPASFSERYNLAPEKFLTVVYDDRRGAITVKFPIAKKDGRYYFALRKE*
Ga0070713_10000761163300005436Corn, Switchgrass And Miscanthus RhizosphereMPNPRLLFSVLLTVALSSGMAGCHRSGNASTSDPAQDEFVRAFLTAHDNKDQNAEEKLVDWDDVTESSRNHFVGELKSGLSVNITAKIENMPAVPADFSARYNIPPEKFLVVVYDDPRGAITVKFPIAKKSGRYYFALRKE*
Ga0070711_10161782523300005439Corn, Switchgrass And Miscanthus RhizosphereNASTPDAAQDEFLQAFLRAHEKKDQDAEQKLVDWDDVTESSRDHFIGELKSGLGVKITAKIESMPAVPPNFSARYNIPPEKFLVVVYDDARGPITVKFPIAKKDGRYYFALR*
Ga0070708_10036916523300005445Corn, Switchgrass And Miscanthus RhizosphereMTKARWLLKVLCTVVLSSGMAGCHRSENASTSAGAEDEFVQAFLTAHDSRDLDAEEKLVDWDNVTENSRNHFIGELKSGLDVKITAKVEDLPAVPAGFSARYNIPPEKFLMVVDAYVDSRGAITVKFPIAKKDGRYYFALRKE*
Ga0070706_10076057023300005467Corn, Switchgrass And Miscanthus RhizosphereASTSAGAEDEFVQAFLTAHDSRDLDAEEKLVDWDNVTENSRNHFIGELKSGLDVKITAKVEDLPAVPAGFSARYNIPPEKFLMVVDAYVDSRGVITVKFPIAKKDGRYYFALRKE*
Ga0070697_10121399513300005536Corn, Switchgrass And Miscanthus RhizosphereMSRSCYLLQVLCTVALTSGTAGCHHSGNPTPSEAGGTSIDPAEHEFVQAFLTAHDKKDLDAEEKLVDWDDVTDSSRNHFIGELKSGLGVKITAKTESMPAVPPGFSALYNIPPEKFLVVLYDDSRGVITVKFPIAKKDGRYYFAMRKQ*
Ga0070686_10004344213300005544Switchgrass RhizosphereETSKMSRSCYLLQVLCTVALTSGTAGCHHSGNPTPSEAGGTSIDPAEHEFVQAFLTAHDKKDLDAEEKLVDWDDVTDSSRNHFIGELKSGLGVKITAKTESMPAVPPGFSALYNIPPEKFLEVLYDDSRGVITVKFPIAKKDGRYYFAMRKQ*
Ga0070695_10075666823300005545Corn, Switchgrass And Miscanthus RhizosphereMKKAGWVFMVCTVAASSGVAGCHRAEKAAIAEGAEAEFVQAFLTAHDHKDLDAEEKLVYWDNVTESSRNHFIGELKSGLDVKITAKVEDLPGVPAGFSERYNIAPKKFLTVVYDDPRGAITVKFPIAKKDGRYYFALRKE*
Ga0070693_10001769523300005547Corn, Switchgrass And Miscanthus RhizosphereVTKAGLVFTVVFTVVFTVVLISGLGGCKRAEKAAIAEGAEAEFVQAFLTAHDHKDLDAEEKLVYWDNVTESSRNHFIGELKSGLDVKITAKVEDLPAVPAGFSERYNIAPKKFLTVVYDDPRGAITVKFPIAKKDGRYYFALRKE*
Ga0068864_10224475313300005618Switchgrass RhizosphereTSIDPAEHEFVQAFLTAHDKKDLDAEEKLVDWDDVTDSSRNHFIGELKSGLGVKITAKTESMPAVPPGFSALYNIPPEKFLEVLYDDSRGVITVKFPIAKKDGRYYFAMRKQ*
Ga0070717_1109438123300006028Corn, Switchgrass And Miscanthus RhizosphereGNASTSDPAQDEFVRAFLTAHDNKDQNAEEKLVDWDDVTESSRNHFVGELKSGLSVNITAKIENMPAVPADFSARYNIPPEKFLVVVYDDPRGAITVKFPIAKKSGRYYFALRKE*
Ga0070712_10024270623300006175Corn, Switchgrass And Miscanthus RhizosphereMPKARWLLKVLCTIVLSSGMAGCHRSGNASTSAGAEDEFVQAFLTAHDSKDLDAEKKLVDWDNVTENSRNHFIGDLKSGLDVKITAKVEDLPAVPAGFSARYNIPPEKFLTVVYAYDDSRGAITVKFPIAKKDGRYYFALRKE*
Ga0075425_10157041513300006854Populus RhizosphereMPKSRSLLQILCMIALAADTVGCRRSGNAAPSEAVSASIDPAEREFLQSFLTAHDKKDLDAEEKLVDWDDVTGNSRNHFIGELKSGLDVKITAKVEDLPAVPAGFSALYNIPPEKFLTVVYAYVDSRGVITVKFPIAKKDGQYYFAMRKQ*
Ga0099794_1011225123300007265Vadose Zone SoilMANARWVFRVVCTVALSLAVSGCHRAGNAGASEGAEGEFVQAFLAAHANKDLDAEEKLVDWDNVAEASRNHFIGELKSGLDVKITAKVESMPAVPAGFSERYNIPPEKFLTVVYDDRRGPITVKFPIAKKDGRYFFALRKE*
Ga0099795_1011433223300007788Vadose Zone SoilMAGCHHSGNPSSSDPAQDEFVQALLTAHDKKDLDAEEKLVVWDGVTETSRNHFIGELKSGLNVKITAKVENMPAVPPGFSDRYNIPPEKFLVIVYDDPRGPITVKFPIARKDGRYYFALRKE*
Ga0105245_1042455713300009098Miscanthus RhizosphereLQVLCTVALTSGTAGCHHSGNPTPSEAGGTSIDPAEHEFVQAFLTAHDKKDLDAEEKLVDWDDVTDSSRNHFIGELKSGLGVKITAKTESMPAVPPGFSALYNIPPEKFLVVLYDDSRGVITVKFPIAKKDGRYYFAMRKQ*
Ga0105247_1003429613300009101Switchgrass RhizosphereLQVLCTVALTSGTAGCHHSGNPTPSEAGGTSIDPAEHEFVQAFLTAHDKKDLDAEEKLVDWDDVTDSSRNHFIGELKSGLGVKITAKTESMPAVPPGFSALYNIPPEKFLEVLYDDSRGVITVKFPIAKKDGRYYFAMRKQ*
Ga0099792_1001473513300009143Vadose Zone SoilAHDNKDLDAEEKLVDWDDVTQSSRNHFIGEFKSGLEVKITANIESLPTVPPGFSARYNIPPEKFLVVVYDDPRGPITVKFPIAKKGGRYYFALRKE*
Ga0099792_1052758513300009143Vadose Zone SoilQSKMPKTNMLWVVCAAALSLAVGCHHSSPNPSTSNSAENEFVQAFLTAHDNKDLDAEEKLVDWDDVTESSRNHFIGEFKSGMAVKIAAKVESLPTVPPGFSARYNIPPEKFLVVVYDDPRGAITVKFPIAKKDGRYYFAMRKE*
Ga0099796_1001359533300010159Vadose Zone SoilMAGCHHSGNPSSSDPAQDEFVQALLTAHDKKDLDAEEKLVVWDGVTETSRNHFIGELKSGLNVKITAKVENMPAVPPGFSDRYNIPPEKFLVVVYDDPRGPITVKFPIARKDGRYYFALRKE*
Ga0099796_1036462623300010159Vadose Zone SoilMPKTNMLWVVCAAALTSAAMGCHHSETASTSDHVQDEFVQAFLTAHDNKDLDAEEKLVDWDDVTESSRNHFIGEFKSGMVVKIAAKVESLPTVPPGFSARYNIPPEKFLVVVYDDPRGAITVKFPIAKKDGRYYFAMRKE*
Ga0099796_1046392213300010159Vadose Zone SoilMANARWVFRVVCTVALSLAVAGCHRAGNAGASEGAEGEFVQAFLAAHANKDLDAEEKLVDWDNVAEASRNHFIGELKSGLDVKITAKVESMPAVPAGFSERYNIPPEKFLTVVYDDRRGPITVKFPIAKKDGRYYFALRKE
Ga0134123_1060853423300010403Terrestrial SoilSGNPTPSEAGGTSIDPAEHEFVQAFLTAHDKKDLDAEEKLVDWDDVTDSSRNHFIGELKSGLGVKITAKTESMPAVPPGFSALYNIPPEKFLEVLYDDSRGVITVKFPIAKKDGRYYFAMRKQ*
Ga0137363_1002617923300012202Vadose Zone SoilMANARWVFRVVCTVALSLAVAGCHRAGNAGASEGAEGEFVQAFLAAHANKDLDAEEKLVDWDNVAEASRNHFIGELKSGLDVKITAKVESMPAVPAGFSERYNIPPEKFLTVVYDDRRGPITVKFPIAKKDGRYFFALRKE*
Ga0137363_1020290223300012202Vadose Zone SoilMCDIEDAGTMPKPRYLLQVVCAAALTLGMAGCQRPGTSSASDATDPAQHEFVRAFLTAHDRNDLDSEEKLVDWDDVTESSRNHFVGELKSGLGVKVTSAQIESIPNLSSFFVSLYNIAPQMFFVVVYDDPRGVITMKYPIAKKDGRYCFALRKE*
Ga0137362_1040864023300012205Vadose Zone SoilMANARWVFRVVCTVALSLAVAGCHRAGNAGASEGAEGEFVQAFLAAHANKDLDAEEKLVDWDNVAEASRNHFIGELKSGLDVKITAKVESMPAVPAGFSERYNIPPEKFLTVVYDDRRGPITVKFPIAKKDGRYYFALRKE*
Ga0137362_1145804613300012205Vadose Zone SoilMPKPCYLLQVVCAALSLAVGCHHSSPNPSTSNSAENEFVQAFLTAHDNKDLDAEEKLVDWDDVTESSRNHFIGEFKSGMAVKITANVESLPTVPPGFSARYNIPPEKFLVVVYDDPRGAITVKFPIAKKDGRYYFALRKE*
Ga0137362_1163883223300012205Vadose Zone SoilTAHDNKDLGAEQKLVAWDGVTESSRSHFTGELKSGLEVKITANIESMPAVPQSFSARYNIPPEKFLVVVYDDPRGAITVKFPIAKKDGRYYFALRKE*
Ga0137360_1014593023300012361Vadose Zone SoilMPKPCYLLQVVCAALSLAVGCHHSSPNPSTSNSAENEFVQAFLTAHDNKDLDAEEKLVDWDDVTESSRNHFIGEFKSGMAVKITANVESLPTVPPGFSARYNIPPEKFLVVVYDDPRGGITVKFPIAKKDGRYYFAMRKE*
Ga0137360_1070831613300012361Vadose Zone SoilFRVVCTVALSLAVAGCHRAGNAGASEGAEGEFVQAFLAAHDNKDLDAEEKLVDWDNVAEASRNHFIGELKSGVDVKITAKIETMPAVPAGFSERYNIPPEKFLTVVYDDRRGPITVKFPIAKKDGRYYFALRKE*
Ga0137358_1040592123300012582Vadose Zone SoilCAAALTLAGCHHDSANPPTSDPAQDQFAQAFLTAHDDKDLDAEEKLVDWDDVTESSRNHFIGEFKSGMAVKIAARVESLPTVPPGFSARYNIPPEKFLVVVYDDPRGAITVKFPIAKKDGRYYFAMRKE*
Ga0137358_1096875713300012582Vadose Zone SoilHRAGNAGASEGAEGEFVQAFLAAHANKDLDAEEKLVDWDNVAEASRNHFIGELKSGLDVKITAKVETMPAVPAGFSERYNIPPEKFLTVVYDDRRGPITVKFPIAKKDGRYFFALRKE*
Ga0137398_1022056733300012683Vadose Zone SoilMPKSNILWVVCTAALTSAAMGCHHSETASTSDHVQDEFVQAFLTAHDNKDLDAEEKLVDWDDVTESSRNHFVGEFKSGMAVKIAAKVESLPTVPPGFSARYNIPPEKFLVVVYDDPRGAITVKFPIAKKDGRYYFAMRKE*
Ga0137397_1068194513300012685Vadose Zone SoilMFDAEDRKMPKSCYLLEILCAAALTSAGCHHNSANPSTSDPAQDQFAQAFLTAHDNKDLDAEEKLVDWDDVTESSRNHFIGEFKSGMAVKIAARVESLPTVPPGFSARYNIPPEKFLVVVYDDPRGAITVKFPIAKKDGRYYFAMRKE*
Ga0137395_1002111153300012917Vadose Zone SoilMAGCQRPGTSSASDATDPAQHEFVRAFLTAHDRNDLDSEEKLVDWDDVTESSRNHFVGELKSGLGVKVTSAQIESIPNLSSFFVSLYNIAPQMFFVVVYDDPRGVITMKYPIAKKDGRYCFALRKE*
Ga0137395_1128071113300012917Vadose Zone SoilQHDICVFAWRVAGLYSILGDREMTKARWPLKVLCTIVLSSGMAGCHRSGNASTSAGAEDEFVQAFLTAHDNRDLDAEEKLVDWDNVTENSRNHFIGELKSGLDVQITAKVEDLPAVPAGFSARYNIPPEKFLTVVYAYVDSRGAITVKFPIAKKDGRYYFALRKE*
Ga0137396_1081047713300012918Vadose Zone SoilLQAFLAAHDKKDLEAEEKLVDWDDVTDHSREHFAREELQSGLGVKITSAKIEDIPGLSPNFVARYNILPEKFFVAVYHDPRGVITMKYPIGKKEGRYYFAMFGITPEAMQRNVKRLSKNNK*
Ga0137359_1001344193300012923Vadose Zone SoilMFAAEDCKMPKSCYLLEVLCSAALTSAGCHHTSANPSTSDPAQDQFVQAFLTAHDKKDLDAEEKLVDWDGVSESSRNHFVGEFSSGMAVKITANVESLPTVPPGFSARYNIPPEKFLVVVYDDPRGAITVKFPIAKKDGRYYFAMRKE*
Ga0137359_1133539623300012923Vadose Zone SoilVQAFLTAHDNKDLDAEEKLVDWDDVTESSRNHFIGEFKSGMAVKITANVESLPTVPPGFSARYNIPPEKFLVVVYDDPRGAITVKFPIARKDGRYYFALRKE*
Ga0137413_1021007913300012924Vadose Zone SoilMGLTWGMAGCHHSGNPSSSDPAQDEFVQALLTAHDKKDLDAEEKLVVWDGVTETSRNHFIGELKSGLNVKITAKVENMPAVPPGFSDRYNIPPEKFLVIVYDDPRGPITVKFPIARKDGRYYFALRKE*
Ga0137416_1020928423300012927Vadose Zone SoilMTKARWLLKVLCTIVLSSGMAGCHRSGNASTSAGAEDEFVQAFLTAHDSRDLDAEEKLVDWDNVTENSRNHFIGELKSGLDVKITAKVEDLPAVPAGFSARYNIPPEKFLTVVYAYVDSRGAITVKFPIAKKDGRYYFALRKE*
Ga0137416_1025459823300012927Vadose Zone SoilMANARWVFRVVCTVALSLAVAGCHRAGNAGASEGAEGEFVQAFLAAHDNKDLDAEEKLVDWDNVAEASRNHFIGELKSGLDVKITAKVESMPAVPAGFSERYNIPPEKFLTVVYGDRRGPITVKFPIAKKDGRYYFALRKE*
Ga0164303_1124560313300012957SoilLQVLCTVALTSGTAGCHHSGNPTPSEAGGTSIDPAEHEFVQAFLTAHDKKDLDAEEKLVDWDDVTESSRNLFIGELKSGLGVKITAKTESMPAVPPGFSALYNIPPEKFLVILYDDSRGVITVKFPIAKKDGRYY
Ga0164302_1060571713300012961SoilAHDKKDLDAEEKLVDWDDVTDSSRNHFIGELKSGLGVKITAKTESMPAVPPGFSALYNIPPEKFLVVLYDDSRGVITVKFPIAKKDGRYYFAMRKQ*
Ga0137414_114732923300015051Vadose Zone SoilMPNARYLFHVLCTVGLTWGMAGCHHSGNPSSSDPAQDEFVQALLTAHDKKDLDAEEKLVVWDGVTETSRNHFIGELKSGLNVKITAKVENMPAVPPGFSDRYNIPPEKFLVVVYDDPRGPITVKFPIARKDGRYYFALRKE*
Ga0137418_1067286313300015241Vadose Zone SoilLQAFLAAHDKKDLEAEEKLVDWDDVTDHSREHFAREELQSGLGVKITSAKIEDIPGLSPNFVARYNILPEKFFVAVYHDPRGVITMKYPIGKKEGRYYFAMFGITPEAMQRN
Ga0137412_1002205093300015242Vadose Zone SoilMGCHHSSPNPSTSNSAENEFVQAFLTAHDNKDLDAEEKLVDWDDVTESSRNHFIGEFKSGMAVKIAARVESLPTVPPGFSARYNIPPEKFLVVVYDDPRGAITVKFPIAKKDGRYYFAMRKE*
Ga0137409_1050881913300015245Vadose Zone SoilMANARWVFRVVCTVALSLAVAGCHRAGNAGASEGAEGEFVQAFLAAHANKDLDAEEKLVDWDNVAEASRNHFIGELKSGLDVKITAKVESMPAVPAGFSERYNIPPEKFLTVVYDDRRGPITV
Ga0066662_1047185623300018468Grasslands SoilMAKACWLVGVLCTLVLSSAVAGCHRSQNASAADGAAGEFVRAFLKAHDNKDLNAEKDLVDWDNASESSRNHFIGELKSGLDVKITAKVEDLPSVPPNFTSLYNIPPEKFLTVVYDDPRGAITVKFPIAKKE
Ga0179594_1017460523300020170Vadose Zone SoilNASTSGGAEDEFVQAFLTAHDSRDLDAEEKLVDWDNVTENSRNHFIGELKSGLDVKITAKVEDLPAVPAGFSARYNIPPEKFLTVVYAYVDSRGAITVKFPIAKKDGRYYFALRKE
Ga0179592_1006331213300020199Vadose Zone SoilMTKARWLLKVLCTIVLSSGMAGCHRSGNASTSAGAEDEFVQAFLTAHDSRDLDAEEKLVDWDNVTENSRNHFIGELKSGLDVKITAKVEDLPAVPAGFSARYNIPPEKFLTVVYAYVDSRGAITVKFPIAKKDGRYYFALRKE
Ga0179592_1027399323300020199Vadose Zone SoilGLEFPNKDLDAEEKLVDWDNVAEASRNHFIGELKSGLDVKITAKVESMPAVPAGFSERYNIPPEKFLTVVYDDRRGPITVKFPIAKKDGRYFFALRKE
Ga0179592_1050433013300020199Vadose Zone SoilSLLFETLSVSSQFMFDAKDRKMPKSCYLLEILCAAALTSAGCHHNSANPSTSDPAQDQFAQAFLTAHDNKDLDAEEKLVDWDDVTESSRNHFIGEFKSGMAVKIAARVESLPTVPPGFSARYNIPPEKFLVVVYDDPRGAITVKFPIAKKDGRYYFAMRKE
Ga0210407_1053396813300020579SoilGNTSTSDAAQDEFVQAFLTAHDKQDLDAEEKLVDWDDVTESSRNHFIGELKSGLDVKITAKIESMPAVPPNFSARYNIPPEKFLVVVYDDPRGAITVKFPIAEKDGRYYFALRKE
Ga0210401_1040680923300020583SoilAMSSGMVGCQRSGNVPTSDPAQDEFVQAFLTAHDKKDQDAEEKLVDWDDVTESSRNHFIGELRSGLNVKITAKIESMPGMPPDFSARYNIPPEKFLVVVYEDPRGAITVKFPIAKKEGRYYFALRKE
Ga0210401_1144783113300020583SoilAGNAGASEGAEGEFVQAFLGAHDNKDLDAEEKLVDWDNVAEASRNHFIGELKSGLDVKITAKVESMPAVPAGFSERYNIAPEKFLTVVYDDRRGPITVKFPIAKKDGRYFFALRKE
Ga0210404_1063179213300021088SoilMADARWVFRVVCSVALGLAVAGCHRAGNAGASEGAEGEFVQAFLGAHDNKDLDAEEKLVDWDNVAEASRNHFIGELKSGLDVKITAKVESMPAVPAGFSERYNIAPEKFLTVVYDDRRGPITVKFPIAKKDGRYFFALRK
Ga0210406_1119520413300021168SoilVQAFLTAHDKQDLDAEEKLVDWDDVTESSRNHFIGELKSGLDVKITAKIESMPAVPPDFSARYNIPPEKFFVVVYDDPRGAITVKFPIAKKDGRYY
Ga0210400_1000039743300021170SoilMPKPSLLQVLCAAALTLAMVGCHHSANPSTSDHAQDEFVQAFLTAHDKKDLDAEEKLVDWDGVSESSRNHFVGEFSSGMSVKITANVESLPTVPPGFSARYNIPPEKFLVVVYDDPRGAITVKFPIAKKDGRYYFAMRKE
Ga0210405_1006705213300021171SoilMPSPRLLFNVLLTVAMSSGMVGCQRSGNVPTSDPAQDEFVQAFLTAHDKKDQDAEEKLVDWDDVTESSRNHFIGELRSGLNVKITAKIESMPGMPPDFSARYNIPPEKFLVVVYEDPRGAITVKFPIAKKEGRYYFALRKE
Ga0210396_1030670633300021180SoilMADARWVFRVVCSVALGLAVAGCHRAGNAGASEGAEGEFVQAFLGAHDNKDLDAEEKLVDWDNVAEASRNHFIGELKSGLDVKITAKVESMPAVPAGFSERYNIAPEKFLTVVYDDRRGPITVKFPIAKKDGRYFFALRKE
Ga0210389_1065228323300021404SoilAGCHRAGNAGASEGAEGEFVQAFLGAHDNKDLDAEEKLVDWDNVAEASRNHFIGELKSGLDVKITAKVESMPAVPAGFSERYNIAPEKFLTVVYDDRRGPITVKFPIAKKDGRYFFALRK
Ga0210384_1179970213300021432SoilMVGCQRSGNVPTSDPAQDEFVLAFLTAHDKKDQDAEEKLVDWDDVTESSRNHFIGELRSGLNVKITAKIESMPGMPPDFSARYNIPPEKFLVVVYEDPRGAITVKFPIAKKEGRYYFALRKE
Ga0210390_1101571513300021474SoilGGRFIFDLRRSQMADARWVFRVVCSVALGLAVAGCHRAGNAGASEGAEGEFVQAFLGAHDNKDLDAEEKLVDWDNVAEASRNHFIGELKSGLDVKITAKVESMPAVPAGFSERYNIAPEKFLTVVYDDRRGPITVKFPIAKKDGRYFFALRKE
Ga0210409_1165539913300021559SoilMVGCQRSGNVPTSDPAQDEFVQAFLTAHDKKDQDAEEKLVDWDDVTESSRNHFIGELRSGLNVKITAKIESMPGMPPDFSARYNIPPEKFLVVVYEDPRGAITVKFPIAKKEGRYYFALRKE
Ga0207710_1042809313300025900Switchgrass RhizosphereRETSKMSRSCYLLQVLCTVALTSGTAGCHHSGNPTPSEAGGTSIDPAEHEFVQAFLTAHDKKDLDAEEKLVDWDDVTDSSRNHFIGELKSGLGVKITAKTESMPAVPPGFSALYNIPPEKFLEVLYDDSRGVITVKFPIAKKDGRYYFAMRKQ
Ga0207699_1120110423300025906Corn, Switchgrass And Miscanthus RhizosphereMSVSDPAQNEFVQAFLTAHDKKDLDAEEKLVDWDDVTETSRDHFRGELKSALSDKITAKIEDLPVVPPGFSARYNIPPERFLVVVYDDPRGAITVKFPIAKKDGRYYFALRKE
Ga0207684_1054493623300025910Corn, Switchgrass And Miscanthus RhizosphereMAGCHRSENASTSAGAEDEFVQAFLTAHDSRDLDAEEKLVDWDNVTENSRNHFIGELKSGLDVKITAKVEDLPAVPAGFSARYNIPPEKFLMVVDAYVDSRGVITVKFPIAKKDGRYYFALRKE
Ga0207687_1156604913300025927Miscanthus RhizosphereIDPAEHEFVQAFLTAHDKKDLDAEEKLVDWDDVTDSSRNHFIGELKSGLGVKITAKTESMPAVPPGFSALYNIPPEKFLEVLYDDSRGVITVKFPIAKKDGRYYFAMRKQ
Ga0207700_1016012423300025928Corn, Switchgrass And Miscanthus RhizospherePAQDEFVRAFLTAHDNKDQNAEEKLVDWDDVTESSRNHFVGELKSGLSVNITAKIENMPAVPADFSARYNIPPEKFLVVVYDDPRGAITVKFPIAKKSGRYYFALRKE
Ga0207700_1067888523300025928Corn, Switchgrass And Miscanthus RhizosphereMRSPRFLSKLLCAVVLTSSTAGCYHSGSSSASDPAQNEFVPTFLTAHDKKDLDAEEKLVDWDDVTDSSRNHFIGELKSGLGVKITAKTESMPAVPPGFSALYNIPPEKFLEVLYDDSRGVITVKFPIAKKDGR
Ga0207686_1044782533300025934Miscanthus RhizosphereMSRSCYLLQVLCTVALTSGTAGCHHSGNPTPSEAGGTSIDPAEHEFVQAFLTAHDKKDLDAEEKLVDWDDVTDSSRNHFIGELKSGLGVKITAKTESMPAVPPGFSALYNIPPEKFLVVLYDDSRGVITVKFPIAKKDGRYYFAMRKQ
Ga0207665_1084118713300025939Corn, Switchgrass And Miscanthus RhizosphereMPKARWLLKVLCTIVLSSGMAGCHRSGNASTSAGAEDEFVQAFLTAHDKKDLDAEEKLVDWDDVTDSSRNHFIGELKSGLGVKITAKTESMPAVPPGFSALYNIPPEKFLVVLYDDSRGVITVKFPIAKKDGRYYFAMRKQ
Ga0207665_1105661913300025939Corn, Switchgrass And Miscanthus RhizosphereDEFVQAFLTAHDKQDLDAEEKLVDWDDVTESSRNHFIGELKSGLGVKITAKIESMPAVPPNFSALYNIPPEKFLVVVYDDPRGAITVKFPTAKKDGRYYFALRKE
Ga0209438_109345513300026285Grasslands SoilMANARWVFRVVCTVALSLAVAGCHRAGNAGASEGAEGEFVQAFLAAHANKDLDAEEKLVDWDNVAEASRNHFIGELKSGLDVKITAKVESMPAVPAGFSERYNIPPEKFLTVVYDDRRGPITMKFPIAKKDGRYFFALRKE
Ga0179587_1009555813300026557Vadose Zone SoilMFDAKDRKMPKSCYLLEILCAAALTSAGCHHNSANPSTSDPAQDQFAQAFLTAHDNKDLDAEEKLVDWDDVTESSRNHFIGEFKSGMAVKIAARVESLPTVPPGFSARYNIPPEKFLVVVYDDPRGAITVKFPIAKKDGRYYFAMRKE
Ga0179587_1020044513300026557Vadose Zone SoilMANARWVFRVVCTVALSLAVAGCHRAGNAGASEGAEGEFVQAFLAAHANKDLDAEEKLVDWDNVAEASRNHFIGELKSGLDVKITAKVESMPAVPAGFSERYNIPPEKFLTVVYDDRRGPITVKFPIAKKDGRYFFALRKE
Ga0209179_101100113300027512Vadose Zone SoilMPNARYLFHVLCTVGLTWGMAGCHHSGNPSSSDPAQDEFVQALLTAHDKKDLDAEEKLVVWDGVTETSRNHFIGELKSGLNVKITAKVENMPAVPPGFSDRYNIPPEKFLVVVYDDPRGPITVKFPIARKDGRYYFALRKE
Ga0209179_101615023300027512Vadose Zone SoilMPKSCYLLEILCAAALTSAGCHHNSANPSTSDPAQDQFAQAFLTAHDNKDLDAEEKLVDWDDVTESSRNHFIGEFKSGMAVKIAARVESLPTVPPGFSARYNIPPEKFLVVVYDDPRGAITVKFPIAKKDGRYYFAMRKE
Ga0209588_108443613300027671Vadose Zone SoilMTKARWLLKVLCTIVLSSGMAGCHRSGNASTSAGAEDEFVQAFLTAHDSRDLDAEEKLVDWDNVTENSRNHFIGELKSGLDVKITAKVEDLPAVPAGFSARYNIPPEKFLTVVYAYVD
Ga0209488_1002416813300027903Vadose Zone SoilMPKTNMLWVVCAAALTSAAMGCHHSETASTSDHVQDEFVQAFLTAHDNKDLDAEEKLVDWDDVTESSRNHFIGEFKSGMAVKIAAKVESLPTVPPGFSARYNIPPEKFLVVVYDDPRGAITVKFPIAKKDGRYYFAMRKE
Ga0209488_1032083023300027903Vadose Zone SoilMPNARYLFHALCTMGLTWGMAGCHHSGNPSSSDPAQDEFVQALLTAHDKKDLDAEEKLVVWDGVTETSRNHFIGELKSGLNVKITAKVENMPAVPPGFSDRYNIPPEKFLVVVYDDPRGPITVKFPIARKDGRYYFALRKE
Ga0137415_1064538223300028536Vadose Zone SoilLQAFLAAHDKKDLEAEEKLVDWDDVTDHSREHFAREELQSGLGVKITSAKIEDIPGLSPNFVARYNILPEKFFVAVYHDPRGVITMKYPIGKKEGRYYFAMFGITPEAMQRNVKRLSKNN
Ga0222749_1060384113300029636SoilMANARWVFRVVYSVAFSLALAGCHRAGNAGASEGAEGEFVQAFLGAHDNKDLDAEEKLVDWDNVAEASRNHFIGELKSGLDVKITAKVESMPAVPAGFSERYNIAPEKFLTVVYDDRRGPITVKFPIAKKDGRYFFALRKE
Ga0075401_1154339113300030935SoilAQDEFVQAFLTAHDKKDLDAQEKLVDWDDVTESSRNHFIGDLKSGLGVKITAKTESMPTVPEGFTALYNIPPEKFLVVLYDDPRGVITVKFPIAKKDGRYYFAMRKQ
Ga0170834_10871408423300031057Forest SoilMPRSSYLLQALFIAALASGTAGCHHSENPTPSGVGSTSIDPAQDEFVQAFLTAHDKKDLDAQEKLVDWDDVTESSRNHFIGDLKSGLGVKITAKTESMPTVPEGFTALYNIPPEKFLVVLYDDPRGVITVKFPIAKKDGRYYFAMRKQ
Ga0170834_10947620913300031057Forest SoilMPNLLKVVCAAALTSGMAGCHHSGNISTSDAAQDEFVQTFLTAHDKQDLDAEEKLVDWDDVTESSRNHFIGELKSGLGVKITAKIESMPAVPPNFSARYNIPPEKFFVVVYDDPRGAITVKFPIAKKDGRYYFALRKE
Ga0170824_12276066513300031231Forest SoilFSRVCSMQRTSKMPNLLKVVCAAALTSGMAGCHHSGNISTSDAAQDEFVQTFLTAHDKQDLDAEEKLVDWDDVTESSRNHFIGELKSGLGVKITAKIESMPAVPPNFSARYNIPPEKFFVVVYDDPRGAITVKFPIAKKDGRYYFALRKE
Ga0307469_1009507633300031720Hardwood Forest SoilLTAHDKKDLEAEEKLVDWDNVTQRSRDHLRGDLKSGLDVKITANIESMPAVPPNFSALYNIPPEKFLVIVYDDPRGAITVKFPIAKKDGRYYFALRKE
Ga0307469_1034881023300031720Hardwood Forest SoilMPKARWLLKVLCTIVLSSGMAGCHRSGNASTSAGAEDEFVQAFLTAHDSKDLDAEKKLVDWDNVTENSRNHFIGDLKSGLDVKITAKVEDLPAVPAGFSALYNIPPEKFLTVVYAYDDSRGAITVKFPIAKKDGRYYFALRKE
Ga0307469_1061685413300031720Hardwood Forest SoilDATDPAQQEFVQAFLTAHDNKDLDAEEKLVDWDDVTESSRNHFIGELKSGLGVKITAKTESMPAVPPGFSALYNISPEKFLVVLYGDPRGVITVKFPIAKKGGRYYFALRKQ
Ga0307468_10140628123300031740Hardwood Forest SoilMPKARWLLKVLCTIVLSSGMAGCHRSGNASTSAGAEDEFVQAFLTAHDSKDLDAEKKLVDWDNVTENSRNHFIGDLKSGLDVKITAKVEDLPAVPAGFSARYNIPPEKFLTVIYAYDDSRGAITVKFPIAKKDGRYYFALRKE
Ga0307468_10197687613300031740Hardwood Forest SoilMPRSCYVLQVMCTVALTSVTAGCHYSGNPTPSGAGTSIDPAQDEFVQAFLTAHDKKDLEAEEKLVDWDNVTQRSRDHLRGDLKSGLDVKITANIESMPAVPPNFSALYNIPPEKFLVIVYDDPRG
Ga0307475_1016438313300031754Hardwood Forest SoilMQRTSKMPNLLKVVCAAALTSGMAGCRHSGNTSTSDAAQDEFVQAFLTAHDKQDLDAEEKLVDWDDVTESSRNHFIGELKSGLDVKITAKIESMPAVPPNFSARYNIPPEKFLVVVYDDPRGAITVKFPIAEKDGRYYFALRKE
Ga0307479_1010646813300031962Hardwood Forest SoilMPNLLKVVCAAALTSGMAGCRHSGNTSTSDAAQDEFVQAFLTAHDKQDLDAEEKLVDWDDVTESSRNHFIGELKSGLDVKITAKIESMPAVPPNFSARYNIPPEKFLVVVYDDPRGAITVKFPIAEKDGRYYFALRKE
Ga0307471_10034489313300032180Hardwood Forest SoilMPNLLKVVCAAALTSGMAGCHHSGNISTSDAAQDEFVQAFLTAHDKQDLDAEEKLVDWDDVTESSRNHFIGELKSGLDVKITAKIESMPAVPPNFSARYNIPPEKFLVVVYDDPRGAITVKFPIAKKDGRYYFALRKE
Ga0307472_10203378113300032205Hardwood Forest SoilMPNLLKVVCAAALTSGMAGCHHSGNISTSDAAQDEFVQAFLTAHDKQDLDAEEKLVDWDDVTESSRNHFIGELKSGLGVKITAKIESMPAVPPNFSALYNIPPEKFLVVVYDDPRGAITVKFPTAK


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.