Metagenome / Metatranscriptome Family F101641

Basic Information
Family ID	F101641
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	67 residues
Representative Sequence	MEDLRAELEAATAALREHLASWPYAYAMAGGCHGGAEHPALRAVRDEVDRLRTRCGDLRALIAEHG
Number of Associated Samples	86
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	10.00 %
% of genes near scaffold ends (potentially truncated)	28.43 %
% of genes from short scaffolds (< 2000 bps)	89.22 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.72

Most Common Taxonomy
Group	Bacteria (62.745 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (42.157 % of family members)
Environment Ontology (ENVO)	Unclassified (37.255 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.961 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.57% β-sheet: 0.00% Coil/Unstructured: 40.43%
Feature Viewer

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SCOP family	SCOP domain	Representative PDB	TM-score
f.5.1.0: automated matches	d3pika_	3pik	0.86359
c.49.2.0: automated matches	d6rdps_	6rdp	0.84042
f.5.1.0: automated matches	d1yc9a_	1yc9	0.83993
a.26.1.1: Long-chain cytokines	d1cnt1_	1cnt	0.83602
a.4.5.0: automated matches	d5x14a1	5x14	0.83192

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF02074	Peptidase_M32	35.29
PF08240	ADH_N	3.92
PF01262	AlaDh_PNT_C	1.96
PF00107	ADH_zinc_N	1.96
PF01019	G_glu_transpept	1.96
PF07883	Cupin_2	0.98
PF01266	DAO	0.98
PF01475	FUR	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG2317	Zn-dependent carboxypeptidase, M32 family	Posttranslational modification, protein turnover, chaperones [O]	35.29
COG0405	Gamma-glutamyltranspeptidase	Amino acid transport and metabolism [E]	1.96
COG0735	Fe2+ or Zn2+ uptake regulation protein Fur/Zur	Inorganic ion transport and metabolism [P]	0.98

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	62.75 %
Unclassified	root	N/A	37.25 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	62.75 %
Unclassified	root	N/A	37.25 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	62.75 %
Unclassified	root	N/A	37.25 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.25 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	18.63 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	8.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.25 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	12.75 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	8.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.25 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	8.82 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	3.92 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.25 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	8.82 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3.92 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.25 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	8.82 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	0.98 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.25 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	8.82 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	0.98 %
Frigoribacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Frigoribacterium	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.25 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	8.82 %
unclassified Frigoribacterium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Frigoribacterium → unclassified Frigoribacterium	0.98 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.25 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	8.82 %
Frigoribacterium sp. 9N	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Frigoribacterium → unclassified Frigoribacterium → Frigoribacterium sp. 9N	0.98 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002568\|C688J35102_120982761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	5281	Open in IMG/M
3300004479\|Ga0062595_100246685	Not Available	1154	Open in IMG/M
3300004480\|Ga0062592_100137763	Not Available	1606	Open in IMG/M
3300005329\|Ga0070683_100545570	All Organisms → cellular organisms → Bacteria → Proteobacteria	1108	Open in IMG/M
3300005329\|Ga0070683_100767193	All Organisms → cellular organisms → Bacteria	924	Open in IMG/M
3300005338\|Ga0068868_100423419	Not Available	1153	Open in IMG/M
3300005339\|Ga0070660_101161084	All Organisms → cellular organisms → Bacteria → Terrabacteria group	654	Open in IMG/M
3300005366\|Ga0070659_101957773	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300005535\|Ga0070684_100917620	Not Available	821	Open in IMG/M
3300005843\|Ga0068860_101368252	Not Available	729	Open in IMG/M
3300006175\|Ga0070712_100412311	All Organisms → cellular organisms → Bacteria	1118	Open in IMG/M
3300006175\|Ga0070712_100471018	Not Available	1049	Open in IMG/M
3300006954\|Ga0079219_10656832	Not Available	784	Open in IMG/M
3300006954\|Ga0079219_10970968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	699	Open in IMG/M
3300009177\|Ga0105248_11451888	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300009840\|Ga0126313_10613137	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300010040\|Ga0126308_10492778	Not Available	827	Open in IMG/M
3300010166\|Ga0126306_10175284	All Organisms → cellular organisms → Bacteria	1607	Open in IMG/M
3300010166\|Ga0126306_10740606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	790	Open in IMG/M
3300010360\|Ga0126372_11041705	All Organisms → cellular organisms → Bacteria → Proteobacteria	833	Open in IMG/M
3300010399\|Ga0134127_12719126	All Organisms → cellular organisms → Bacteria → Terrabacteria group	575	Open in IMG/M
3300010401\|Ga0134121_11227395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	751	Open in IMG/M
3300012204\|Ga0137374_10324676	All Organisms → cellular organisms → Bacteria → Proteobacteria	1252	Open in IMG/M
3300012204\|Ga0137374_10386273	All Organisms → cellular organisms → Bacteria	1117	Open in IMG/M
3300012204\|Ga0137374_10605532	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300012350\|Ga0137372_10154704	All Organisms → cellular organisms → Bacteria	1870	Open in IMG/M
3300012355\|Ga0137369_11027527	Not Available	544	Open in IMG/M
3300012360\|Ga0137375_10495252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1042	Open in IMG/M
3300012509\|Ga0157334_1019502	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300012951\|Ga0164300_10233625	All Organisms → cellular organisms → Bacteria → Proteobacteria	923	Open in IMG/M
3300012955\|Ga0164298_10346878	Not Available	939	Open in IMG/M
3300012955\|Ga0164298_11657058	Not Available	506	Open in IMG/M
3300012960\|Ga0164301_10993279	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300012961\|Ga0164302_10308352	All Organisms → cellular organisms → Bacteria → Proteobacteria	1037	Open in IMG/M
3300012989\|Ga0164305_11337080	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300013105\|Ga0157369_10764046	All Organisms → cellular organisms → Bacteria → Proteobacteria	994	Open in IMG/M
3300013105\|Ga0157369_12148743	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300013308\|Ga0157375_10972217	Not Available	990	Open in IMG/M
3300014497\|Ga0182008_10256424	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M
3300014969\|Ga0157376_12107090	All Organisms → cellular organisms → Bacteria → Terrabacteria group	602	Open in IMG/M
3300015371\|Ga0132258_12054733	All Organisms → cellular organisms → Bacteria	1437	Open in IMG/M
3300015372\|Ga0132256_102283710	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300015373\|Ga0132257_102159552	Not Available	720	Open in IMG/M
3300018027\|Ga0184605_10290885	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300018028\|Ga0184608_10085627	All Organisms → cellular organisms → Bacteria	1297	Open in IMG/M
3300018066\|Ga0184617_1003663	Not Available	2592	Open in IMG/M
3300018071\|Ga0184618_10092115	Not Available	1176	Open in IMG/M
3300019356\|Ga0173481_10773641	All Organisms → cellular organisms → Bacteria → Terrabacteria group	527	Open in IMG/M
3300019361\|Ga0173482_10182269	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300019869\|Ga0193705_1099603	Not Available	532	Open in IMG/M
3300019875\|Ga0193701_1016774	Not Available	1482	Open in IMG/M
3300020082\|Ga0206353_11954430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Frigoribacterium → unclassified Frigoribacterium → Frigoribacterium sp. 9N	1741	Open in IMG/M
3300025927\|Ga0207687_10486915	All Organisms → cellular organisms → Bacteria → Proteobacteria	1028	Open in IMG/M
3300025931\|Ga0207644_11199475	All Organisms → cellular organisms → Bacteria → Terrabacteria group	638	Open in IMG/M
3300025932\|Ga0207690_10217213	All Organisms → cellular organisms → Bacteria	1461	Open in IMG/M
3300025937\|Ga0207669_11397938	Not Available	596	Open in IMG/M
3300025942\|Ga0207689_10102905	All Organisms → cellular organisms → Bacteria	2346	Open in IMG/M
3300025945\|Ga0207679_11993492	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300025981\|Ga0207640_10238052	All Organisms → cellular organisms → Bacteria → Proteobacteria	1405	Open in IMG/M
3300026023\|Ga0207677_10053067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2757	Open in IMG/M
3300026023\|Ga0207677_11017215	Not Available	752	Open in IMG/M
3300026078\|Ga0207702_12503494	Not Available	502	Open in IMG/M
3300026095\|Ga0207676_11298259	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300026118\|Ga0207675_101227373	All Organisms → cellular organisms → Bacteria → Proteobacteria	770	Open in IMG/M
3300026121\|Ga0207683_11376487	Not Available	653	Open in IMG/M
3300027775\|Ga0209177_10226655	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300028589\|Ga0247818_10257106	Not Available	1155	Open in IMG/M
3300028705\|Ga0307276_10012868	All Organisms → cellular organisms → Bacteria	1526	Open in IMG/M
3300028705\|Ga0307276_10043819	Not Available	972	Open in IMG/M
3300028707\|Ga0307291_1005125	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2796	Open in IMG/M
3300028711\|Ga0307293_10091136	Not Available	965	Open in IMG/M
3300028715\|Ga0307313_10170760	All Organisms → cellular organisms → Bacteria → Terrabacteria group	673	Open in IMG/M
3300028718\|Ga0307307_10018694	Not Available	1905	Open in IMG/M
3300028720\|Ga0307317_10018506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2117	Open in IMG/M
3300028722\|Ga0307319_10121588	Not Available	841	Open in IMG/M
3300028744\|Ga0307318_10089675	Not Available	1035	Open in IMG/M
3300028755\|Ga0307316_10333917	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300028771\|Ga0307320_10428327	Not Available	532	Open in IMG/M
3300028784\|Ga0307282_10377152	Not Available	686	Open in IMG/M
3300028793\|Ga0307299_10013114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2934	Open in IMG/M
3300028793\|Ga0307299_10262225	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300028793\|Ga0307299_10397385	Not Available	517	Open in IMG/M
3300028796\|Ga0307287_10251663	Not Available	669	Open in IMG/M
3300028799\|Ga0307284_10372874	Not Available	579	Open in IMG/M
3300028807\|Ga0307305_10215281	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300028814\|Ga0307302_10363771	Not Available	714	Open in IMG/M
3300028814\|Ga0307302_10594479	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300028828\|Ga0307312_10232657	All Organisms → cellular organisms → Bacteria	1189	Open in IMG/M
3300028828\|Ga0307312_11099082	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300028876\|Ga0307286_10243487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	658	Open in IMG/M
3300028878\|Ga0307278_10005242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6219	Open in IMG/M
3300028880\|Ga0307300_10074291	All Organisms → cellular organisms → Bacteria	995	Open in IMG/M
3300028881\|Ga0307277_10227036	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300028881\|Ga0307277_10462520	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300028884\|Ga0307308_10487001	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300028885\|Ga0307304_10176488	Not Available	904	Open in IMG/M
3300031164\|Ga0307502_10003955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3112	Open in IMG/M
3300031996\|Ga0308176_12168606	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300032074\|Ga0308173_10861008	Not Available	837	Open in IMG/M
3300034384\|Ga0372946_0057950	Not Available	1763	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	74.51%
Host-Associated	Host-Associated	25.49%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	70.59%
Plants	Host-Associated → Plants	25.49%
Aquatic	Environmental → Aquatic	3.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.59%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.73%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.76%
Sediment	Environmental → Aquatic → Sediment	3.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	64.71%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.86%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.86%
Loam	Environmental → Terrestrial → Soil → Loam	5.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.96%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	55.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.86%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.92%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.98%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	42.16%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.88%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.92%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	3.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.94%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.94%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.98%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012509	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_6	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300019875	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031164	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 16_S	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300034384	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_KNG_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J35102_1209827613	3300002568	Soil	MEQLRKELEEVGATLRERLAGRPYAFAMAGGCHGGAEQPALRAVGDEVDRLVERRDASFWPTLPR*
Ga0062595_1002466853	3300004479	Soil	MEDLRAELEAATAALREHLASWPYAYAMAGGCHGGAEHPALRAVRDEVDRLRTRCGDLRALIAEHG*
Ga0062592_1001377632	3300004480	Soil	MEDLRAELEAADAALREHLASWPYAYAMAGGCHGGAEHPALRAVRDEVERLRTRCGDLRALIAEHG*
Ga0070683_1005455701	3300005329	Corn Rhizosphere	MDDLRAELEATTAALRKHLASWPYAYAMAGGCHGGAEHPTLRAVRDEVDRLRTRCGDLRALIAEHG*
Ga0070683_1007671933	3300005329	Corn Rhizosphere	MEHLRAELDKATAALRELMAGWPYAYAMAGGCHGGSEHPVLRAVRDEADALRTRCGDLAARIAEHS*
Ga0068868_1004234191	3300005338	Miscanthus Rhizosphere	MEDLRAELEAATAALREYLASWPYAYAMAGGCHGGAEHPALRAVRDEVDRLRTRCGDLQALIAEHG*
Ga0070660_1011610841	3300005339	Corn Rhizosphere	MEDLRAELEAATAALREYLASWPYAYAMAGGCHGGPEHPALRAVRDEADRLRTRCGDLRALIAEQG*
Ga0070659_1019577731	3300005366	Corn Rhizosphere	MEDLRAELEAATAALREHLASWPYAYAMAGGCHGGAEHPALRAVRDEADRLRTRCGDLRALIAEHG*
Ga0070684_1009176201	3300005535	Corn Rhizosphere	MEHLRAELETATTSLRELMASWPYAFAMAGGCHGGAEHPTLRAVRREVAELRTRCGDLEALIAEHR*
Ga0068860_1013682521	3300005843	Switchgrass Rhizosphere	RRSTACSVRLKDFRRWAEHHGWMEHLRAELETATAALRELMASWRYAFAMAGGCHGGAEHPALRAVRHEVAELRTRCGDLEARIAEHL*
Ga0070712_1004123113	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MEDLRAELEAATAALREYLASWPYAYAMAGGCHGGAEHPALRAVRDEADRLRTRCGDLRALIAEHG*
Ga0070712_1004710182	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	FRRWAEHHWWMEHLRAELETATAALRELMASWPYAFAMAGGCYGGAEHPTLCAVRHEVAALRTRCGDLEAQLAEHR*
Ga0079219_106568322	3300006954	Agricultural Soil	MEHLHAELEATTAALREHLASWPYAYAMAGGCHGGAEHPTLRAVRDEVDRLRTRCGDLRALIAEHG*
Ga0079219_109709682	3300006954	Agricultural Soil	MEDLRAELEATTAALRKHLASWPYAYAMAGGCHGGAEHPTLRAVRDEVDRLRTRCGDLRALIAEHG*
Ga0105248_114518881	3300009177	Switchgrass Rhizosphere	MEDLRAELEAATAALREHLASWPYAYAMAGGCHGGAEHPALRAVRDEADRLRTRCGDLRALIAERG*
Ga0126313_106131373	3300009840	Serpentine Soil	MEDLRAELEKVEAALREHLASWPYAFAMAGGCHGGAEHPTLKAVRDEVDRLRTRRADLEALIAEHG*
Ga0126308_104927782	3300010040	Serpentine Soil	MEDLRAELEMATAALREHFASWPYAYAMAGGCHGGAEHPALRAVRDEVDRLRTRCGDLRALIAEHG*
Ga0126306_101752842	3300010166	Serpentine Soil	MEDLRAELENVKAALREHLASWPYAFAMAGGCHGGAEHPTLRAVRDEVDRLRARCRDLEARLAELI*
Ga0126306_107406062	3300010166	Serpentine Soil	MDQLRAELEEATAALREHQASWPYAFAMAGGCHGGAEHPRLRAVREETDRLRARCLDLKARVAELTG*
Ga0126372_110417051	3300010360	Tropical Forest Soil	MEDLRTELEEATRALRAHLASWPYAFAVAGGCHGGADHPTLRAELEEVERLRTRCLDLQARIAEFD*
Ga0134127_127191262	3300010399	Terrestrial Soil	MEDLRAELDAATATLREHLASWPYAYAMAGGCHGGAEHPALRAVRDEVDRLRTRCGDLRTLIAEHG*
Ga0134121_112273952	3300010401	Terrestrial Soil	MEDLRAELEAATAALREHLASWPYAYAMAGGCHGGAEHPALRAVRDEVDRLRTRCGDLRALLAEHG*
Ga0137374_103246762	3300012204	Vadose Zone Soil	MEDLRAELEKVEAALREHLASWPYAFAMAGGCHGGAEHPTLKAVRDEVDRLRTRRGDLEALIAEHG*
Ga0137374_103862731	3300012204	Vadose Zone Soil	MEHLRDELEAATAALREQLASWPYAFAMAGGCHGGAEHPALRAVRDEVDRLRQRCRDLEARIAEHT*
Ga0137374_106055321	3300012204	Vadose Zone Soil	MEHLRAELEEATAALREHLASWPYAFAMAGGGHGGSQHPALRAVRDETARLHARCRDLEARIAELT*
Ga0137372_101547043	3300012350	Vadose Zone Soil	MEHLRAELEEATAELKAQLASWPYAFAMAGGCHGGAEHPTLRAVRDEVDRLRTRCRDLEARLAELT*
Ga0137369_110275271	3300012355	Vadose Zone Soil	MEQLRAELEDATAALRAQLASWAYAFAMAGGGHGGSQHPALRAVRDETARLHARCRDLEARIAELT*
Ga0137375_104952522	3300012360	Vadose Zone Soil	MVERLRADLEEATAALRAHKASWPYAFAMAGGCHGGAEHPSLRAVRNETDRLHARCLDLKALIAELTD*
Ga0157334_10195021	3300012509	Soil	MEHLHAELEATTAALREHLASWPYAYAMAGGCHGGAEHPTLRAVRDEVDRLRTRRGDLEALIAEHS*
Ga0164300_102336253	3300012951	Soil	MEDLRAELETATAALREHLASWQYAYAMAGGCHGGAEHPALCAVRDEVDRLRTRCGDLRARIAEHSQTADSV*
Ga0164298_103468781	3300012955	Soil	RTPQAFRRCADHHWAMEDLRAELEAATAALREHLASWPYAYAMAGGCHGGAEHPALRAVRDEVDRLRTRCGDLRALIAEHG*
Ga0164298_116570581	3300012955	Soil	MEDLRAELETATAALREHLASWQYAYAMAGGCHGGAEHPALCAVRDEVDRLRTRCGDLRARLAEHGQT
Ga0164301_109932791	3300012960	Soil	MEDLRAELETATAALREHLASWQYAYAMAGGCHGGAEHPALCAVRDEVDRLRTRCGDLRA
Ga0164302_103083523	3300012961	Soil	MEDLHAELETATAALREHLASWQYAYAMAGGCHGGAEHPALCAVRDEVDRLRTRCGDLRARLAEHGQTADSV*
Ga0164308_105744542	3300012985	Soil	AALREYLASWPYAYAMAGGCHGGAEHPALRAVRDEADRLRTRCGDLRALIAEHG*
Ga0164305_113370802	3300012989	Soil	MEDLRAELEAATAALREYLASWPYAYAMAGGCHGGAEHPALRAVRDEVDRLRTRCGDLRALIAEHG*
Ga0157369_107640463	3300013105	Corn Rhizosphere	MEDLRAELEAADAALREHLASWPYAYAMAGGCHGGAEHPALRAVRDEVDRLRTRCGDLRALIAEHG*
Ga0157369_121487432	3300013105	Corn Rhizosphere	MEHLRAELETATAALRELMASWPYAFAMAGGCYGGAEHPTLRAVRHEVAELRTRCGDLEARIAEHL*
Ga0157375_109722171	3300013308	Miscanthus Rhizosphere	MEHLRAELETATAALRELMASWPYAFAMAGGCYGGAEHPTLRAVRHEVAALRTRCGDLEAQLAEHR*
Ga0182008_102564242	3300014497	Rhizosphere	MEHLRAELETANAALRELMASWPYAFAMAGGCHGGAEHPRLRAVRREVAELRTRCGDLEARIAEHR*
Ga0157376_121070902	3300014969	Miscanthus Rhizosphere	MEHLRAELETATTSLRELMASWPYAFAMAGGCHGGAEHPTLRAVRHEVAELRTRCGDLEALIAEHR*
Ga0132258_120547332	3300015371	Arabidopsis Rhizosphere	MEDLRAELEAATAALREYLASWPYAYAMAGGCHGGAEHPALRAVRDEVDRLRTRCADLRALIAEHS*
Ga0132256_1022837102	3300015372	Arabidopsis Rhizosphere	MEHLYAELEATTAALREHLASWPYAYAMAGGCHGGAEHPTLRAVRDEVDRLRTRCGDLRALIAEHG*
Ga0132257_1021595522	3300015373	Arabidopsis Rhizosphere	WAMEHLHAELEATTAALREHLASWPYAFAMAGGCHGGAEHPSLRAVRDEVDRLRTRRGDLEALIAEHS*
Ga0184605_102908852	3300018027	Groundwater Sediment	MEDLRTELEKTSAALREHLASWPYAFAMAGGCHGGAEHPALRAVRDEVERLRTRCGDLEARIAEHS
Ga0184608_100856272	3300018028	Groundwater Sediment	MEDLRAELEMATAALGKHLASWPYAYAMAGGCHGGAEHPALRAVRDEVDRLRTRCGDLRALIAEHG
Ga0184617_10036632	3300018066	Groundwater Sediment	MEDLRAELDMATAALGKHLASWPYAYAMAGGCHGGAEHPALRAVRDEVDRLRTRCGDLRALIAEHG
Ga0184618_100921152	3300018071	Groundwater Sediment	MEHLRDELEKATAALREHIASWPYAFAMAGGCHGGAEHPALRSVRDEVDRLRTRCSDLEARIAEHS
Ga0173481_107736411	3300019356	Soil	TAALRELMAGWPYAYAMAGGCHGGAEHPTLRAVRDEVDRLRTRCGDLRALIAEHG
Ga0173482_101822693	3300019361	Soil	MEDLRAELEAADAALREHLASWPYAYAMAGGCHGGAEHPALRAVRDEVERLRTRCGDLRALIAEHG
Ga0193705_10996032	3300019869	Soil	MEDLRAELEMATAALGKHLASWPYAYAMAGGCHGGSEHPALRAVRDEVDRLRTRCGDLRALIAEH
Ga0193701_10167741	3300019875	Soil	WAMEDLRAELEMATAALGKHLASWPYAYAMAGGCHGGSEHPALRAVRDEVDRLRTRCGDLRALIAEHG
Ga0206353_119544303	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	MEHLRAELDKATAALRELMAGWPYAYAMAGGCHGGSEHPVLRAVRDEADALRTRCGD
Ga0207687_104869153	3300025927	Miscanthus Rhizosphere	MEDLRAELEDATAALREHLASWPYAYAMAGGCHGGAEHPALRAVRDEVDRLRTRCGDLQALIAEHG
Ga0207644_111994752	3300025931	Switchgrass Rhizosphere	MEDLRAELEAATAALREYLASWPYAYAMAGGCHGGAEHPALRAVRDEADRLRTRCGDLRALIAEQG
Ga0207690_102172132	3300025932	Corn Rhizosphere	MEDLRAELEDATAALREHLASWPYAYAMAGGCHGGAEHPALRAVRDEADRLRTRCGDLRALIAEHG
Ga0207669_113979381	3300025937	Miscanthus Rhizosphere	MEDLRAELEAATAALREHLASWPYAYAMAGGCHGGAEHPALRAVRDEVDRLRTRCGDLQALIAEH
Ga0207689_101029053	3300025942	Miscanthus Rhizosphere	MEHLRAELDKATAALRELMAGWPYAYAMAGGCHGGSEHPVLRAVRDEADALRTRCGDLAARIAEHS
Ga0207679_119934922	3300025945	Corn Rhizosphere	CRCADEHRWMEHLRAELDKATAALRELMAGWPYAYAMAGGCHGGSEHPVLRAVRDEADALRTRCGDLAARIAEHS
Ga0207640_102380523	3300025981	Corn Rhizosphere	MEDLRAELEAATAALREHLASWPYAYAMAGGCHGGAEHPALRAVRDEVDRLRTRCGDLRALIAEHG
Ga0207677_100530673	3300026023	Miscanthus Rhizosphere	MDHLRAELDKATAALRELMAGWPYAYAMAGGCHGGSEHPVLRAVRDEADALRTRCGDLAARIAEHS
Ga0207677_110172151	3300026023	Miscanthus Rhizosphere	ELEAATAALREHLASWPYAYAMAGGCHGGAEHPALRAVRDEVDRLRTRCGDLQALIAEHG
Ga0207702_125034941	3300026078	Corn Rhizosphere	MEHLRAELEATTAALREHLASWPYAYAMAGGCHGGAEHPTLRAVRDEVDRLRTRCGDLRALIAEHD
Ga0207676_112982592	3300026095	Switchgrass Rhizosphere	MEHLRAELETATAALRELMASWPYAFAMAGGCHGGAEHPALRAVRHEVAELRTRCGDLEARIAEHL
Ga0207675_1012273731	3300026118	Switchgrass Rhizosphere	MEDLRAELEDATAALREHLASWPYAYAMAGGCHGGAEHPALRAVRDEVDRLRTRCGDL
Ga0207683_113764872	3300026121	Miscanthus Rhizosphere	LTRAELETATASLRELMASWPYAFAMAGGCHGGAEHPTLRAVRHEVAELRTRCGDLEALIAEHR
Ga0209177_102266552	3300027775	Agricultural Soil	CADHHWRMEDLRAELEATTAALRKHLASWPYAYAMAGGCHGGAEHPTLRAVRDEVDRLRTRCGDLRALIAEHG
Ga0247818_102571063	3300028589	Soil	MEDLRAELEAATAALREHLASWPYAYAMAGGCHGGAEHPALRAVRDEVDRLRTRCGDLQALIAEHG
Ga0307276_100128682	3300028705	Soil	MLDVVDQLQNELDEAMAALRAHLASWPYAFSTAGGWHAGGEHPALSAVRDENERLRARCRSLRARIAELS
Ga0307276_100438192	3300028705	Soil	EHLRAELEATTAALREHLASWPYAYAMAGGCHGGAEHPTLRAVRDEVDRLRTRCGDLRALIAEHD
Ga0307291_10051252	3300028707	Soil	MEHLRAELEATTAALREHLASWPYAYAMAGGCHGGAEHPALRAVRDEVDRLRTRCGDLRALIAEHG
Ga0307293_100911362	3300028711	Soil	MEDLRAELEMATAALGKHLASWPYAYAMAGGCHGGSEHPALRAVRDEVDRLRTRCGDLRALIAEHG
Ga0307313_101707601	3300028715	Soil	RPSGRGVLLALPQGFRRCADHHVGMEHLRAELEKVTAALREQIASWPYAFAMAGGCNGGAEHPTLRAVRDEVEQLRRRCGDLEARIAEHT
Ga0307307_100186943	3300028718	Soil	MEDLRAELEATTAALRKHLASWPYAYAMAGGCHGGAEHPALRAVRDEVERLRTRCGDLRALIAEHG
Ga0307317_100185061	3300028720	Soil	MEDLRAELEMATAALGKHLASWPYAYAMAGGCHGGAEHPALRAVRDEVDRLRTRC
Ga0307317_103058801	3300028720	Soil	AALGKHLASWPYAYAMAGGCHGGAEHPALRAVRDEVDRLRTRCGDLRALIAEHG
Ga0307319_101215882	3300028722	Soil	MEHLRTELEKASAALREHLASWPYAFAMAGGCHGGAEHPTLRAVRDEVERLRTRCGDLEARIAEHS
Ga0307318_100896751	3300028744	Soil	GMEHLRTELEEASAALREHLASWPYAFAMAGGCHGGAEHPALRAVRDEVERLRTRCGDLEARIAEHS
Ga0307316_103339171	3300028755	Soil	EEASAALREHLASWPYAFAMAGGCHGGAEHPALRAVRDEVERLRTRCGDLEARIAEHS
Ga0307320_104283272	3300028771	Soil	MGVVDQLQAELDQATAELREHLASWPYAFAMAGGCHGGSEHPALRAVRDENERLRARCRDLHARLAEFT
Ga0307282_103771521	3300028784	Soil	HHWAMEHLRAELEATTAALREHLASWPYAYAMAGGCHGGAEHPALRAVRDEVDRLRTRCGDLRALIAEHG
Ga0307299_100131142	3300028793	Soil	MEDLRAELEMATAALGKHLASWPYAYAMAGGCHGGSEHPALRAVRDEVDRLRTRCGDLRALIAERG
Ga0307299_102622251	3300028793	Soil	MEHLRAELDKATAALREHLASWPYAFAMAGGCHGGAEHPALRAVRDEVQRLRIRCGDLEARIAEHS
Ga0307299_103973851	3300028793	Soil	MDQLRVELEEANAALREHMASWPYAFAMAGGCHGGSEHSALRAVREETDRLRARCLDLKARIAERA
Ga0307287_102516632	3300028796	Soil	CADHHWAMEDLRAELEMATAALGKHLASWPYAYAMAGGCHGGSEHPALRAVRDEVDRLRTRCGDLRALIAEHG
Ga0307284_103728743	3300028799	Soil	MEDLRAELEMATAALGKHLASWPYAYAMAGGCHGGSEHPALRAVRDEVDRLRTR
Ga0307305_102152812	3300028807	Soil	MEHLRAELEKVTAALREQIASWPYAFAMAGGCNGGAEHPTLRAVRDEVEQLRRRCGDLEARIAEHT
Ga0307302_103637712	3300028814	Soil	DHHGGMEDLRTELEKASAALREHLASWPYAFAMAGGCHGGAEHPALRAVRDEVERLRTRCGDLEARIAEHS
Ga0307302_105944792	3300028814	Soil	MGVVDQLQAELDQATAELREHLASWPYAFAMAGGCHGGSEHPALRAVRDENERLRARCRDLRARLAEFT
Ga0307312_102326571	3300028828	Soil	MDQLRVELQEANAALREHMASWPYAFAMAGGCHGGSEHSALRAVREETDRLRARCLDLKARIAELA
Ga0307312_110990822	3300028828	Soil	TPQGFRRCADHHWAMEHLRAELEATTAALREHLASWPYAYAMAGGCHGGAEHPALRAVRDEVDRLRTRCGDLRALIAEHG
Ga0307286_102434871	3300028876	Soil	ADHHLRMEDLRAELEKVQAALREHLASWPYAFAMAGGCHGGAEHPSLRAVRDEVDRLRTRRGDLEALIAEHS
Ga0307278_100052424	3300028878	Soil	MEHLRAELDEATAALRAHLASWPYAFAMAGGCHGGAEHPTLRAVRDEVDRLRARCRDLEARLAELI
Ga0307300_100742913	3300028880	Soil	MGVVDQLQAELDQATAELREHLASWPYAFAMAGSCHGGSEHPALRAVRDENERLRARCRDLHARLAEFT
Ga0307277_102270362	3300028881	Soil	MEHLRAELEKATAALREHLASWPYAFAMAGGCHGGAEHPTLRAVRDEVERLRIRCGDLEARIAEHS
Ga0307277_104625202	3300028881	Soil	MEDLRTELEKASAALREHLASWPYAFAMAGGCHGGAEHPALRAVRDEVERLRTRCGDLEARIAEHS
Ga0307308_104870012	3300028884	Soil	MVERIRAELGEASAALRAHKASWPYAFAMAGGCHGGSEHPALRAVREETDRLHTRCLDLKALIAELTD
Ga0307304_101764882	3300028885	Soil	MHELEAELQEAIAALRAHLASWPYAFAMAGGCNGGSEHPQLREVREENERLRARCRHLRARIAELSA
Ga0307502_100039553	3300031164	Soil	MEHLRAELEKATAALREHLASWPYAFAMAGGCHGGAEHPALRAVRDEVDRLRTRCGDLEARIAEHS
Ga0308176_121686062	3300031996	Soil	MEDLRVELEATTAALREHLASWPYAYAMAGGCHGGAEHPTLRAVRDEVDRLRTRCGDLRALIAEHG
Ga0308173_108610082	3300032074	Soil	MEHLRAELEATTAALREHLASWPYAYAMAGGCHGGAEHPTLRAVRDEVDRLRTRCGDLRALIAEHG
Ga0372946_0057950_144_350	3300034384	Soil	MEDLRAELEKVTAALREHLASWQYAFAMAGGCHGGAEHPTLRAVRAEVERLRRRCGDLEARIAEHLIA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.72
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.72
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F101641

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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