Metagenome / Metatranscriptome Family F101566

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F101566
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	49 residues
Representative Sequence	NHVNYLFGQFGAISAEPTPLELGQSGFGFPLAARAPRQIQFALKFYF
Number of Associated Samples	87
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.96 %
% of genes near scaffold ends (potentially truncated)	96.08 %
% of genes from short scaffolds (< 2000 bps)	92.16 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.14

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (83.333 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (10.784 % of family members)
Environment Ontology (ENVO)	Unclassified (39.216 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.980 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.14
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.14
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF08220	HTH_DeoR	19.61
PF04909	Amidohydro_2	14.71
PF07602	DUF1565	7.84
PF04223	CitF	3.92
PF08013	GatZ_KbaZ-like	2.94
PF00294	PfkB	1.96
PF12867	DinB_2	1.96
PF01380	SIS	1.96
PF06857	ACP	0.98
PF14310	Fn3-like	0.98
PF00723	Glyco_hydro_15	0.98
PF12697	Abhydrolase_6	0.98
PF14534	DUF4440	0.98
PF13229	Beta_helix	0.98
PF08125	Mannitol_dh_C	0.98
PF00324	AA_permease	0.98
PF16640	Big_3_5	0.98
PF01435	Peptidase_M48	0.98
PF07609	DUF1572	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG3051	Citrate lyase, alpha subunit	Energy production and conversion [C]	3.92
COG4573	Tagatose-1,6-bisphosphate aldolase non-catalytic subunit AgaZ/GatZ	Carbohydrate transport and metabolism [G]	2.94
COG0246	Mannitol-1-phosphate/altronate dehydrogenases	Carbohydrate transport and metabolism [G]	0.98
COG0531	Serine transporter YbeC, amino acid:H+ symporter family	Amino acid transport and metabolism [E]	0.98
COG0833	Amino acid permease	Amino acid transport and metabolism [E]	0.98
COG1113	L-asparagine transporter or related permease	Amino acid transport and metabolism [E]	0.98
COG1115	Na+/alanine symporter	Amino acid transport and metabolism [E]	0.98
COG3387	Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family	Carbohydrate transport and metabolism [G]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	83.33 %
Unclassified	root	N/A	16.67 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	83.33 %
Unclassified	root	N/A	16.67 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	83.33 %
Unclassified	root	N/A	16.67 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	69.61 %
Unclassified	root	N/A	16.67 %
Spirochaetes	phylum	All Organisms → cellular organisms → Bacteria → Spirochaetes	1.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	29.41 %
Unclassified	root	N/A	16.67 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	9.80 %
Spirochaetia	class	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia	1.96 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.98 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	28.43 %
Unclassified	root	N/A	16.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.80 %
Spirochaetales	order	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales	1.96 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.98 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	28.43 %
Unclassified	root	N/A	16.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.80 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.98 %
unclassified Spirochaetales	no rank	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → unclassified Spirochaetales	0.98 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.80 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2.94 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	1.96 %
spirochete symbiont of Stewartia floridana	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → unclassified Spirochaetales → spirochete symbiont of Stewartia floridana	0.98 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	0.98 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.98 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.80 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.96 %
Edaphobacter lichenicola	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	1.96 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	0.98 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	0.98 %
unclassified Desulfobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae	0.98 %
spirochete symbiont of Stewartia floridana	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → unclassified Spirochaetales → spirochete symbiont of Stewartia floridana	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.80 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.96 %
Edaphobacter lichenicola	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	1.96 %
Candidatus Sulfopaludibacter sp. SbA4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	0.98 %
Desulfobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	0.98 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	0.98 %
spirochete symbiont of Stewartia floridana	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → unclassified Spirochaetales → spirochete symbiont of Stewartia floridana	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004082\|Ga0062384_100162471	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1279	Open in IMG/M
3300004082\|Ga0062384_100370289	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	914	Open in IMG/M
3300004092\|Ga0062389_103247796	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	609	Open in IMG/M
3300004092\|Ga0062389_103366814	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	599	Open in IMG/M
3300004152\|Ga0062386_100698119	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	833	Open in IMG/M
3300004152\|Ga0062386_101313721	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	602	Open in IMG/M
3300005610\|Ga0070763_10081748	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1599	Open in IMG/M
3300005610\|Ga0070763_10479111	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	709	Open in IMG/M
3300005921\|Ga0070766_10275093	All Organisms → cellular organisms → Bacteria	1075	Open in IMG/M
3300006176\|Ga0070765_100560473	All Organisms → cellular organisms → Bacteria	1076	Open in IMG/M
3300009523\|Ga0116221_1336637	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	654	Open in IMG/M
3300009524\|Ga0116225_1388616	All Organisms → cellular organisms → Bacteria → Acidobacteria	621	Open in IMG/M
3300009645\|Ga0116106_1256608	Not Available	556	Open in IMG/M
3300009672\|Ga0116215_1433284	Not Available	569	Open in IMG/M
3300009683\|Ga0116224_10197484	All Organisms → cellular organisms → Bacteria → Acidobacteria	964	Open in IMG/M
3300009698\|Ga0116216_10436121	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300009698\|Ga0116216_10528706	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	712	Open in IMG/M
3300009759\|Ga0116101_1009422	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1751	Open in IMG/M
3300009839\|Ga0116223_10736007	Not Available	565	Open in IMG/M
3300010341\|Ga0074045_11017365	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	520	Open in IMG/M
3300010343\|Ga0074044_10975261	Not Available	555	Open in IMG/M
3300010379\|Ga0136449_100070664	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7495	Open in IMG/M
3300011120\|Ga0150983_11418229	All Organisms → cellular organisms → Bacteria	1008	Open in IMG/M
3300012096\|Ga0137389_10770349	All Organisms → cellular organisms → Bacteria → Acidobacteria	826	Open in IMG/M
3300014158\|Ga0181521_10610485	All Organisms → cellular organisms → Bacteria → Acidobacteria	510	Open in IMG/M
3300014501\|Ga0182024_10077134	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	4993	Open in IMG/M
3300014501\|Ga0182024_10437468	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1681	Open in IMG/M
3300014638\|Ga0181536_10502378	All Organisms → cellular organisms → Bacteria → Acidobacteria	527	Open in IMG/M
3300014658\|Ga0181519_10564688	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	701	Open in IMG/M
3300016702\|Ga0181511_1517901	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300017823\|Ga0187818_10016304	All Organisms → cellular organisms → Bacteria	3173	Open in IMG/M
3300017823\|Ga0187818_10491617	All Organisms → cellular organisms → Bacteria → Acidobacteria	550	Open in IMG/M
3300017823\|Ga0187818_10517834	All Organisms → cellular organisms → Bacteria → Acidobacteria	536	Open in IMG/M
3300017934\|Ga0187803_10101763	Not Available	1128	Open in IMG/M
3300017934\|Ga0187803_10117259	All Organisms → cellular organisms → Bacteria → Acidobacteria	1046	Open in IMG/M
3300017943\|Ga0187819_10520750	Not Available	677	Open in IMG/M
3300017955\|Ga0187817_10377844	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	904	Open in IMG/M
3300017961\|Ga0187778_10822698	All Organisms → cellular organisms → Bacteria → Acidobacteria	634	Open in IMG/M
3300017975\|Ga0187782_10314511	Not Available	1182	Open in IMG/M
3300017999\|Ga0187767_10359017	Not Available	515	Open in IMG/M
3300018003\|Ga0187876_1067684	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1412	Open in IMG/M
3300018009\|Ga0187884_10380184	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300018014\|Ga0187860_1360158	All Organisms → cellular organisms → Bacteria → Acidobacteria	552	Open in IMG/M
3300018018\|Ga0187886_1127622	All Organisms → cellular organisms → Bacteria	1030	Open in IMG/M
3300018034\|Ga0187863_10545488	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	650	Open in IMG/M
3300018040\|Ga0187862_10775687	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	556	Open in IMG/M
3300018042\|Ga0187871_10136959	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1389	Open in IMG/M
3300018042\|Ga0187871_10265213	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	952	Open in IMG/M
3300018042\|Ga0187871_10343425	All Organisms → cellular organisms → Bacteria → Acidobacteria	825	Open in IMG/M
3300018043\|Ga0187887_10314074	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	926	Open in IMG/M
3300018086\|Ga0187769_11288938	Not Available	553	Open in IMG/M
3300018088\|Ga0187771_10112108	All Organisms → cellular organisms → Bacteria	2209	Open in IMG/M
3300020579\|Ga0210407_11129976	All Organisms → cellular organisms → Bacteria → Acidobacteria	592	Open in IMG/M
3300021170\|Ga0210400_10282655	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1360	Open in IMG/M
3300021181\|Ga0210388_10622030	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	944	Open in IMG/M
3300021402\|Ga0210385_10103613	Not Available	1989	Open in IMG/M
3300021402\|Ga0210385_10791043	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	727	Open in IMG/M
3300021405\|Ga0210387_11882566	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300021406\|Ga0210386_11764886	All Organisms → cellular organisms → Bacteria → Acidobacteria	510	Open in IMG/M
3300022515\|Ga0224546_1014231	Not Available	658	Open in IMG/M
3300023090\|Ga0224558_1019735	All Organisms → cellular organisms → Bacteria	3473	Open in IMG/M
3300025412\|Ga0208194_1077288	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300025496\|Ga0208191_1060035	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	812	Open in IMG/M
3300025576\|Ga0208820_1138731	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	557	Open in IMG/M
3300026514\|Ga0257168_1050980	All Organisms → cellular organisms → Bacteria → Acidobacteria	907	Open in IMG/M
3300027394\|Ga0209904_1000052	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9564	Open in IMG/M
3300027521\|Ga0209524_1064158	All Organisms → cellular organisms → Bacteria → Acidobacteria	772	Open in IMG/M
3300027635\|Ga0209625_1049710	All Organisms → cellular organisms → Bacteria → Acidobacteria	936	Open in IMG/M
3300027667\|Ga0209009_1111349	All Organisms → cellular organisms → Bacteria → Acidobacteria	695	Open in IMG/M
3300027696\|Ga0208696_1221765	All Organisms → cellular organisms → Bacteria → Acidobacteria	594	Open in IMG/M
3300027825\|Ga0209039_10321475	All Organisms → cellular organisms → Bacteria → Acidobacteria	606	Open in IMG/M
3300028731\|Ga0302301_1024868	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1749	Open in IMG/M
3300028800\|Ga0265338_10875670	All Organisms → cellular organisms → Bacteria → Acidobacteria	613	Open in IMG/M
3300029882\|Ga0311368_10274939	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1289	Open in IMG/M
3300029883\|Ga0311327_10330783	All Organisms → cellular organisms → Bacteria → Acidobacteria	980	Open in IMG/M
3300029908\|Ga0311341_10076678	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2367	Open in IMG/M
3300029914\|Ga0311359_10489064	Not Available	940	Open in IMG/M
3300029915\|Ga0311358_10558260	All Organisms → cellular organisms → Bacteria → Acidobacteria	876	Open in IMG/M
3300029943\|Ga0311340_10476090	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1123	Open in IMG/M
3300030020\|Ga0311344_10806362	Not Available	762	Open in IMG/M
3300030399\|Ga0311353_10863183	All Organisms → cellular organisms → Bacteria → Acidobacteria	767	Open in IMG/M
3300030503\|Ga0311370_10637888	All Organisms → cellular organisms → Bacteria → Acidobacteria	1267	Open in IMG/M
3300030503\|Ga0311370_11629994	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	666	Open in IMG/M
3300030506\|Ga0302194_10363900	Not Available	567	Open in IMG/M
3300030580\|Ga0311355_10096360	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3304	Open in IMG/M
3300030646\|Ga0302316_10180006	All Organisms → cellular organisms → Bacteria → Acidobacteria	872	Open in IMG/M
3300030659\|Ga0316363_10360207	Not Available	571	Open in IMG/M
3300030737\|Ga0302310_10446271	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	701	Open in IMG/M
3300031057\|Ga0170834_104243572	All Organisms → cellular organisms → Bacteria → Acidobacteria	1148	Open in IMG/M
3300031090\|Ga0265760_10024324	All Organisms → cellular organisms → Bacteria	1764	Open in IMG/M
3300031128\|Ga0170823_12279053	All Organisms → cellular organisms → Bacteria → Acidobacteria	823	Open in IMG/M
3300031231\|Ga0170824_121726916	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	671	Open in IMG/M
3300031231\|Ga0170824_128013685	All Organisms → cellular organisms → Bacteria → Acidobacteria	691	Open in IMG/M
3300031754\|Ga0307475_11306344	All Organisms → cellular organisms → Bacteria → Acidobacteria	562	Open in IMG/M
3300032180\|Ga0307471_101968523	All Organisms → cellular organisms → Bacteria → Acidobacteria	732	Open in IMG/M
3300032205\|Ga0307472_100222201	All Organisms → cellular organisms → Bacteria → Acidobacteria	1456	Open in IMG/M
3300032805\|Ga0335078_12680640	Not Available	508	Open in IMG/M
3300032828\|Ga0335080_11627029	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	635	Open in IMG/M
3300033818\|Ga0334804_139011	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	608	Open in IMG/M
3300033823\|Ga0334837_054232	Not Available	1007	Open in IMG/M
3300033983\|Ga0371488_0262222	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales	841	Open in IMG/M
3300033983\|Ga0371488_0317571	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → unclassified Spirochaetales → spirochete symbiont of Stewartia floridana	741	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.02%
Host-Associated	Host-Associated	0.98%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.67%
Aquatic	Environmental → Aquatic	32.35%
Plants	Host-Associated → Plants	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	46.08%
Freshwater	Environmental → Aquatic → Freshwater	32.35%
Peat	Environmental → Terrestrial → Peat	20.59%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.98%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	32.35%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	26.47%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	20.59%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.76%
Loam	Environmental → Terrestrial → Soil → Loam	7.84%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.98%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	20.59%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	20.59%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	14.71%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.76%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.84%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	6.86%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	4.90%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	10.78%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	9.80%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	8.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.84%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	6.86%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	6.86%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	5.88%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	4.90%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.92%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.92%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	3.92%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.94%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.94%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.96%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.96%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.96%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.98%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.98%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300016702	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018003	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_40	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018014	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40	Environmental	Open in IMG/M
3300018018	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_150	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300022515	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P2 1-5	Environmental	Open in IMG/M
3300023090	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 20-24	Environmental	Open in IMG/M
3300025412	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10 (SPAdes)	Environmental	Open in IMG/M
3300025496	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40 (SPAdes)	Environmental	Open in IMG/M
3300025576	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40 (SPAdes)	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300027394	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 712P3D	Environmental	Open in IMG/M
3300027521	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027696	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300028731	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E1_2	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029883	I_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029908	II_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029914	III_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029915	III_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030020	II_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030506	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_1	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030646	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_2	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030737	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_2	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033818	Peat soil microbial communities from Stordalen Mire, Sweden - 713 S-3-M	Environmental	Open in IMG/M
3300033823	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S3 30-34	Environmental	Open in IMG/M
3300033983	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB23AN SIP fraction	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062384_1001624712	3300004082	Bog Forest Soil	FGQFGAISAEPTPLELNPFIPVSQSTFGFPLSARSPRQIQFALKFYF*
Ga0062384_1003702893	3300004082	Bog Forest Soil	QFGAISAEPTPLELNPFIPVSQSTFGFPLSARAPRQIQFALKFYF*
Ga0062389_1032477962	3300004092	Bog Forest Soil	FFNILNHVNYLFGQFGAISAEPTPLELGQSGFGFPLAARAPRQIQVALKFYF*
Ga0062389_1033668141	3300004092	Bog Forest Soil	LFGQFGAISAEPTPLELGQSGFGYPLSARAPRQIQFALKFYF*
Ga0062386_1006981192	3300004152	Bog Forest Soil	RAEVFNLLNHVNYLFQQFGAISVEPTSLELGSGSLGQPQAARNPREIQLALKFYF*
Ga0062386_1013137211	3300004152	Bog Forest Soil	RAEVFNLLNHVNYLFQQFGAISVEPTSLELGSGNLGQPQAARNPREIQLALKFYF*
Ga0070763_100817483	3300005610	Soil	FRAEFFNLRNHVNNLFSQFGSISIEPAPLELNPTVPAGQSSFGFPVAAHAPRQVQFALKFYF*
Ga0070763_104791112	3300005610	Soil	LFGQFGAISAEPTPLELDPNNINTVATPHVSSFGYPLAARAPREIQFALKFYF*
Ga0070766_102750933	3300005921	Soil	LFGQFGAISAEPTPLELNTASPGSFGLPLAARAPRQIQFALKFYF*
Ga0070765_1005604731	3300006176	Soil	EPTPLELNTASPGSFGLPLAARAPRQIQFALKFYF*
Ga0116221_13366371	3300009523	Peatlands Soil	VNFLFGQFGAISAEPTPLELGQTGFGYPLAARAPRQIQFALKLYF*
Ga0116225_13886161	3300009524	Peatlands Soil	FFNVLNHVNYLFGNFGAISAEPTPLELNVANPQNDFGFPLAARAPRQIQFAEVLFLNPA*
Ga0116106_12566082	3300009645	Peatland	EFFNILNHVNYLFGQFGAISAEPTPLELGQSGFGYPLAARAPRQIQFALKFYF*
Ga0116215_14332841	3300009672	Peatlands Soil	FFNILNHVNYLFEPTGDISEAPTPLILGAAGANGQPVFGLPLAARAPRQIQFALKFYF*
Ga0116224_101974842	3300009683	Peatlands Soil	VNYLFGNFGAISAEPTPLELNVANPQNDFGFPLAARAPRQIQFALKFYF*
Ga0116216_104361212	3300009698	Peatlands Soil	RAEFFNVLNHVNYLFGQFGAISAEPTPLELGQSGFGYPLAARAPRQIQFALKFYF*
Ga0116216_105287062	3300009698	Peatlands Soil	LFGQFGAISAEPTPLELGQTGFGYPLAARAPRQIQFALKFYF*
Ga0116101_10094221	3300009759	Peatland	NYLFGQFGAISAEPTPLELDPNNINTLANPQLSSFGYPLAARAPRQIQFALKFYF*
Ga0116223_107360071	3300009839	Peatlands Soil	HVNYLFGQFGAISAEPTPLELGQSGFGLPLAARAPRQIQFALKFYF*
Ga0074045_110173652	3300010341	Bog Forest Soil	AISAEPTPLELGQGGFGFPLAARAPREIQFALKFYF*
Ga0074044_109752611	3300010343	Bog Forest Soil	PGEISEEPTTLERGTPQFGFPAAARPPRQIQFALKFYF*
Ga0136449_1000706647	3300010379	Peatlands Soil	VNYLFQQFGAISVEPTSLELGSSGLGQPQAALDPRDIQLALKFYF*
Ga0150983_114182291	3300011120	Forest Soil	PVFGIPGEIGAEPTTLENGTSQFGYAAAARPPRQIQVALKFYF*
Ga0137389_107703491	3300012096	Vadose Zone Soil	AISAEPTPLELGQSQFGFPLAARDPRQIQFALKFYF*
Ga0181521_106104851	3300014158	Bog	NILNHVNYLFQQFGAISAEPTPLELGQSGFGFPLAARAPRQVQFALKFYF*
Ga0182024_100771347	3300014501	Permafrost	NLLNHVNYLFSQFGSISAEPTPLELNPTVPAGPSSFGFPVTARAPRQVQFALKFYS*
Ga0182024_104374681	3300014501	Permafrost	FNVLNKVNYLFGQFGAISAEPTPLELGQGGFGFPLAARAPRQIQVALKFYF*
Ga0181536_105023781	3300014638	Bog	FGAISVEPTSLELGSSTLGQPQAARDPREIQLALKFYF*
Ga0181519_105646882	3300014658	Bog	SAEPTPLELGQTGFGFPLAARAPRQIQFALKFYF*
Ga0181511_15179012	3300016702	Peatland	AEFFNILNHVNYLFSPFGGISVNPVPLEFDPGNVNTVTTPHASAFGYPVAARAPRQIQFALKFYF
Ga0187818_100163041	3300017823	Freshwater Sediment	NILNHVNYLFQQFGAISVEPTALELGQGAFGFPQAARNPRQIQFALKFYF
Ga0187818_104916171	3300017823	Freshwater Sediment	NHVNYLFGQFGAISAEPTPLELGQSGFGFPLAARAPRQIQFALKFYF
Ga0187818_105178342	3300017823	Freshwater Sediment	LNHVNYLFQQFGAISVEPTALELGQSAFGFPQAARNPRQVQFALKFYF
Ga0187803_101017632	3300017934	Freshwater Sediment	LNHVNYLFQQFGAISVEPTALELGQSAFGFPQAARNPRQIQFALKFYF
Ga0187803_101172591	3300017934	Freshwater Sediment	ILNHVNYLFQQFGAISVEPTALELGQSPFGFPQAARNPRQLQFALKFYF
Ga0187819_105207502	3300017943	Freshwater Sediment	FFNVLNHVNYLFGNFGAISAEPTPLELNVANSSSDFGFPLASRAPRQIQFALKFYF
Ga0187817_103778442	3300017955	Freshwater Sediment	GQFGAISAEPTPLELGQSGFGFPLAARAPRQIQFALKFYF
Ga0187778_108226981	3300017961	Tropical Peatland	AEFFNVLNHVNYLFGQFGAISAEPTPLELDGNAVNTPQNPNASPFGYPLAARAPRQIQLAVKFYF
Ga0187782_103145112	3300017975	Tropical Peatland	GAISAEPTPLELNGAAINTPQNPNLSPFGYPLAARNPRQIQFALKFYF
Ga0187767_103590172	3300017999	Tropical Peatland	NVLNHVNYLFGSFGAISVEPTPLELDPNNINTPSNPQASAFGYPLAARAPRQVQFALKFY
Ga0187876_10676843	3300018003	Peatland	AISAEPTPLELGQTGFGYPLAARAPRQIQFALKLYF
Ga0187884_103801841	3300018009	Peatland	FGAISAEPTPLELGQTGFGYPLAARAPRQIQFALKLYF
Ga0187860_13601582	3300018014	Peatland	FFNILNHVNYLFQQFGAISVEPTSLELGSSSLGQPQAARDPREIQLALKFYF
Ga0187886_11276222	3300018018	Peatland	LFGQFGAISAEPTPLELGQTGFGYPLAARAPRQIQFALKLYF
Ga0187863_105454882	3300018034	Peatland	NHVNYLFGQFGAISAEPTPLELDPNNINTLANPQLSSFGYPLAARAPRQIQFALKFYF
Ga0187862_107756872	3300018040	Peatland	EFFNILNHVNYLFGQFGAISAEPTPLELNPQAINTPANPQASNFGYPLAARAPRQIQFALKFYF
Ga0187871_101369593	3300018042	Peatland	GQFGAISAEPTPLELGQTGFGYPLAARAPRQIQFALKLYF
Ga0187871_102652131	3300018042	Peatland	NILNHVNYLFGQFGAISAEPTPLELGQTGFGFPLAARAPRQIQFALKFYF
Ga0187871_103434252	3300018042	Peatland	AISAEPTPLELGQPGFGLPLAARPPRQIQFALKFYF
Ga0187887_103140742	3300018043	Peatland	GQFGAISAEPTPLELGQTGFGYPLAARAPRQIQFALKFYF
Ga0187769_112889381	3300018086	Tropical Peatland	HVNYLFGQFGAISAEPTPLELGQTGFGYPLAARAPRQIQFALKFYF
Ga0187771_101121081	3300018088	Tropical Peatland	FNILNHVNYLTQQFGAISVEPTALELNPNAINTPQTPTNSPFGYAQAARAPRQIQLALKFYF
Ga0210407_111299761	3300020579	Soil	AISAEPTPLELGQSQFGFPLAARDPRQIQFALKFYF
Ga0210400_102826553	3300021170	Soil	NYLFGQFGAISAEPTPLEMGQSGFGYPLAARAPRQIQVALKFYF
Ga0210388_106220301	3300021181	Soil	AEFFNVLNHTNFLFGQFRAISAEPTPLELNPFIPADQSTFGYPLSARAPRQIQVALKFYF
Ga0210385_101036132	3300021402	Soil	GAISAEPTPLELNPFIPADQSTFGYPLSARAPRQIQVALKFYF
Ga0210385_107910432	3300021402	Soil	SAEPTPLELNPTNPQSGFGFPLASRAPRNIQFALKLYF
Ga0210387_118825661	3300021405	Soil	NYLFGQFGAISAEPTPLELGQAGFGFPLAARAPRQTQFALKFYF
Ga0210386_117648862	3300021406	Soil	RFEFRPEFFNVLNHVNYLFGSFGAISVEPTPLELDSSNLNTLANPRASNFGYPLAARAPRQIQFALKFYF
Ga0224546_10142311	3300022515	Soil	HVNYLFGQFGAISAEPTPLEMGQSGFGYPLAARAPRQIQVALKFYF
Ga0224558_10197354	3300023090	Soil	NHVNYLFGNFGAISAEPTPLELNLASPSSGFGFPLASRAPRQIQFALKFYF
Ga0208194_10772882	3300025412	Peatland	FGQFGAISAEPTPLELGQTGFGYPLAARAPRQIQFALKLYF
Ga0208191_10600351	3300025496	Peatland	QFGAISAEPTPLELGQSGFGFPLAARAPRQIQFALKFYF
Ga0208820_11387312	3300025576	Peatland	AEFFNVLNHVNYLFGQFGAISAEPTPLELGQSSFGYPLAARAPRQIQFALKFYF
Ga0257168_10509801	3300026514	Soil	LNHTNFLFGQFGAISAEPTPLELDPNNINTVATPHVSSFGYPLAARAPREIQFALKFYF
Ga0209904_10000524	3300027394	Thawing Permafrost	VLNHVNYLFGSFGAISVEPTPLELGQPGFGFPLAARDPRQIQFALKFYF
Ga0209524_10641582	3300027521	Forest Soil	NHTNFLFGQFGAISAEPTPLELDPNNINTVATPHVSSFGYPLAARAPREIQFALKFYF
Ga0209625_10497102	3300027635	Forest Soil	FLFGQFGAISAEPTPLELDPNNINTVATPRLSSFGYPLAARAPRQIQFALKFYF
Ga0209009_11113492	3300027667	Forest Soil	RAEFFNLPNHVNYLFPQLGSISAEPTPLELNPTVPAGQSSLGFPVAARAPRQVQFAVKFY
Ga0208696_12217651	3300027696	Peatlands Soil	VLNHVNYLFGNFGAISAEPTPLELNVANPQNDFGFPLAARAPRQIQFALKFYF
Ga0209039_103214752	3300027825	Bog Forest Soil	NHVNYLFQQFGAISVEPTSLELGSGSLGQPQAARNPREIQLALKFYF
Ga0302301_10248681	3300028731	Palsa	AISAEPTPLELGQPGFGFPLAARPPRQIQFALKFYF
Ga0265338_108756702	3300028800	Rhizosphere	TNFLFGQFGAISAEPTPLELDPNNINTAADPRLSSFGYPLAARPPRQVQFALKFYF
Ga0311368_102749392	3300029882	Palsa	VLNHVNYLFGQFGAISAEPTPLELGQPGFGFPLAARAPRQIQFALKFYF
Ga0311327_103307831	3300029883	Bog	FFNILNHVNYLFGSFGAISVEPTPLELNAANLNTLANPQASNFGYPLAARAPRQIQFALKFYF
Ga0311341_100766781	3300029908	Bog	ILNHVNYLFGQFGAISAEPTPLELDPNNINTLANPQLSSFGYPLAARAPRQIQFALKFYF
Ga0311359_104890642	3300029914	Bog	NILNHVNYLFGQFGAISAEPTPLELDPNNINTAANPDASQFGHPLAARAPRQIQFALKFY
Ga0311358_105582601	3300029915	Bog	GSFGAISVEPTPLELNAANLNTLANPQASNFGYPLAARAPRQIQFALKFYF
Ga0311340_104760901	3300029943	Palsa	EFFNVLNHVNYLFGQFGAISAEPTPLELGQSGFGYPLAARSPRQIQFALKFYF
Ga0311344_108063621	3300030020	Bog	NHVNYLFGQFGAISAEPTPLELNPTNPQSGFGLPLAARAPRQIQFALKFYF
Ga0311353_108631831	3300030399	Palsa	NYLFGQFGAISAEPTPLELGQSGFGYPLSARNPRQIQFALKFYF
Ga0311370_106378881	3300030503	Palsa	GQFGAISAEPTPLELNPTNPQSGFGFPLAARAPRQIQFALKFYF
Ga0311370_116299941	3300030503	Palsa	FGQFGAISAEPTPLELNPFIPVSQSTFGFPLSARAPRQIQFALKFYF
Ga0302194_103639002	3300030506	Bog	LFGQFGAISAEPTPLELDPNNINTKSSPLNSPFGYPLAARAPRQIQFALKFYF
Ga0311355_100963601	3300030580	Palsa	FGAISAEPTPLELGQPGFGFPLAARAPRQIQFALKFYF
Ga0302316_101800061	3300030646	Palsa	EFFNVLNHVNYLFGQFGAISAEPTPLELNPTNPQSGFGFPLAARAPRQIQFALKFYF
Ga0316363_103602071	3300030659	Peatlands Soil	HVNYLFGQFGAISAEPTPLELGQSGFGLPLAARAPRQIQFALKFYF
Ga0302310_104462712	3300030737	Palsa	FGAISAEPTPLEMGQSGFGYPLAARAPRQIQVALKFYF
Ga0170834_1042435722	3300031057	Forest Soil	LNHTNFLFGQFGAISAEPTPLELDPNNINTVANPRLSSFGYPLAARDPREIQFALKFYF
Ga0265760_100243241	3300031090	Soil	ADLLNHVNYLFSQFGSISAEPTPLELNPTVPAGPSSFGFPVAARAPRQVQFAPKFYF
Ga0170823_122790531	3300031128	Forest Soil	NFLFGQFGAISAEPTPLELGQSQFGFPLAARDPRQIQFALKFYF
Ga0170824_1217269161	3300031231	Forest Soil	FNILNHVNYLFGQFGGISAEPTPLELDPNNINTPSTPTVSTFGYPLAARPPRQVQFALKFYF
Ga0170824_1280136851	3300031231	Forest Soil	FGQFGAISAEPTPLELDPNNINTVANPRLSTFGYPLAARDPREIQFALKFYF
Ga0307475_113063442	3300031754	Hardwood Forest Soil	NFLFGQFGAISAEPTPLELDPNNINTVATPRLSSFGYPLAARAPRQIQFALKFYF
Ga0307471_1019685232	3300032180	Hardwood Forest Soil	HTNFLFGQFGAISAEPTPLELDPNNINTVATPRLSSFGYPLAARAPRQIQFALKFYF
Ga0307472_1002222012	3300032205	Hardwood Forest Soil	FNVLNHTNFLFGQFGAISAEPTPLELDPNNINTVATPRLSSFGYPLAARAPRQIQFALKFYF
Ga0335078_126806401	3300032805	Soil	GQFGAISAEPTPLELGQSGFGLPLAARNPRQIQVALKFYF
Ga0335080_116270292	3300032828	Soil	ISQEPTTLELGTSQFGFAAGARAPREIQLAMKFYF
Ga0334804_139011_3_128	3300033818	Soil	FQQFGAISVEPTSVELGSGSLGQPQAARNPREIQLALKFYF
Ga0334837_054232_2_145	3300033823	Soil	FEPTGDISEAPTPLILGATGANGQPVFGLPMAARAPRQIQFALKFYF
Ga0371488_0262222_708_839	3300033983	Peat Soil	YLFQQFGAISVEPTSLELGSGNLGQPQAARNPREIQLALKFYF
Ga0371488_0317571_606_740	3300033983	Peat Soil	NYLFQQFGAISVEPTSLELGTGSFGQPQAARDPREIQLALKFYF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F101566

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences