Metagenome / Metatranscriptome Family F101564

Overview

Basic Information

• Family ID: F101564
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 102
• Average Sequence Length: 46 residues
• Representative Sequence: MDIERVRKELQESALREFPNPERIGCPDPETLGGMSRRIIQMTQ
• Number of Associated Samples: 94
• Number of Associated Scaffolds: 102

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 1.96 %
• % of genes near scaffold ends (potentially truncated): 100.00 %
• % of genes from short scaffolds (< 2000 bps): 99.02 %
• Associated GOLD sequencing projects: 90
• AlphaFold2 3D model prediction: No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (88.235 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (18.628 % of family members)
• Environment Ontology (ENVO): Unclassified (31.373 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (53.922 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 54.55%
  β-sheet: 0.00%
  Coil/Unstructured: 45.45%

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF00665	rve	0.98

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.98
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.98
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.98
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.98

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.24 %
All Organisms	root	All Organisms	11.76 %

Level 2

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.24 %
cellular organisms	root	All Organisms → cellular organisms	11.76 %

Level 3

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.24 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	11.76 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.24 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.96 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.24 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.96 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.24 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.96 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300001593|JGI12635J15846_10485085	Not Available	731
3300002245|JGIcombinedJ26739_101131045	Not Available	671
3300003505|JGIcombinedJ51221_10481683	All Organisms → cellular organisms → Bacteria	500
3300004099|Ga0058900_1422155	All Organisms → cellular organisms → Bacteria	695
3300004594|Ga0068976_1175642	All Organisms → cellular organisms → Bacteria	658
3300004608|Ga0068924_1258392	All Organisms → cellular organisms → Bacteria	604
3300004612|Ga0068961_1288204	All Organisms → cellular organisms → Bacteria	714
3300005538|Ga0070731_10652756	Not Available	699
3300005541|Ga0070733_10384166	Not Available	933
3300005591|Ga0070761_10343387	Not Available	904
3300005591|Ga0070761_10354944	All Organisms → cellular organisms → Bacteria	889
3300006086|Ga0075019_10154130	All Organisms → cellular organisms → Bacteria	1345
3300006176|Ga0070765_100664814	All Organisms → cellular organisms → Bacteria	984
3300009523|Ga0116221_1192179	Not Available	885
3300009634|Ga0116124_1168214	Not Available	612
3300009643|Ga0116110_1061474	Not Available	1327
3300009672|Ga0116215_1398596	Not Available	596
3300009762|Ga0116130_1035232	Not Available	1616
3300010379|Ga0136449_101403345	Not Available	1078
3300011088|Ga0138576_1278178	Not Available	568
3300011269|Ga0137392_11001900	Not Available	686
3300014160|Ga0181517_10520498	Not Available	600
3300014162|Ga0181538_10505670	Not Available	636
3300014164|Ga0181532_10179957	Not Available	1252
3300014168|Ga0181534_10155560	Not Available	1174
3300014168|Ga0181534_10663625	Not Available	606
3300014169|Ga0181531_10129680	Not Available	1518
3300014169|Ga0181531_10533054	Not Available	726
3300016387|Ga0182040_11959871	All Organisms → cellular organisms → Bacteria	503
3300016701|Ga0181509_1282380	Not Available	665
3300017946|Ga0187879_10451535	Not Available	712
3300017948|Ga0187847_10257033	Not Available	952
3300018009|Ga0187884_10276967	Not Available	680
3300018035|Ga0187875_10696135	Not Available	534
3300018037|Ga0187883_10164174	Not Available	1142
3300018043|Ga0187887_10806729	Not Available	555
3300018058|Ga0187766_10852128	Not Available	640
3300018086|Ga0187769_10870305	Not Available	681
3300019242|Ga0181502_1349715	Not Available	652
3300019786|Ga0182025_1374281	Not Available	988
3300020582|Ga0210395_10284051	Not Available	1245
3300021171|Ga0210405_11159378	Not Available	575
3300021181|Ga0210388_11252912	Not Available	628
3300021403|Ga0210397_11260253	Not Available	575
3300021404|Ga0210389_10726461	Not Available	777
3300021405|Ga0210387_10983786	Not Available	740
3300021420|Ga0210394_10588338	Not Available	978
3300021432|Ga0210384_10169507	Not Available	1961
3300021433|Ga0210391_10214863	Not Available	1512
3300021433|Ga0210391_10842523	Not Available	716
3300021477|Ga0210398_11102901	Not Available	630
3300021478|Ga0210402_10718630	Not Available	922
3300021479|Ga0210410_10556067	Not Available	1022
3300021559|Ga0210409_10466980	Not Available	1124
3300021559|Ga0210409_11106547	Not Available	667
3300022507|Ga0222729_1046736	Not Available	590
3300022525|Ga0242656_1047937	Not Available	734
3300022724|Ga0242665_10376737	Not Available	514
3300024271|Ga0224564_1063523	Not Available	730
3300025406|Ga0208035_1070226	Not Available	531
3300025414|Ga0208935_1031102	Not Available	707
3300025507|Ga0208188_1131204	Not Available	542
3300026998|Ga0208369_1030825	Not Available	531
3300026999|Ga0207949_1026719	Not Available	533
3300027562|Ga0209735_1048747	Not Available	905
3300027696|Ga0208696_1158498	Not Available	730
3300027795|Ga0209139_10123871	Not Available	912
3300027853|Ga0209274_10182799	Not Available	1064
3300027853|Ga0209274_10305731	Not Available	817
3300027884|Ga0209275_10184216	Not Available	1122
3300027898|Ga0209067_10102822	Not Available	1488
3300027986|Ga0209168_10396543	Not Available	671
3300028747|Ga0302219_10285513	Not Available	641
3300028780|Ga0302225_10198580	Not Available	964
3300028863|Ga0302218_10135906	Not Available	777
3300029636|Ga0222749_10044168	Not Available	1946
3300029907|Ga0311329_10546479	Not Available	778
3300029915|Ga0311358_10063108	All Organisms → cellular organisms → Bacteria	4099
3300029943|Ga0311340_10450237	Not Available	1166
3300029951|Ga0311371_11895816	Not Available	638
3300029951|Ga0311371_12575675	Not Available	515
3300030053|Ga0302177_10505160	Not Available	624
3300030058|Ga0302179_10065107	Not Available	1622
3300030730|Ga0307482_1166297	Not Available	652
3300030963|Ga0265768_106968	Not Available	681
3300031090|Ga0265760_10206442	Not Available	665
3300031234|Ga0302325_12848294	Not Available	565
3300031259|Ga0302187_10579245	Not Available	504
3300031524|Ga0302320_12002386	Not Available	543
3300031788|Ga0302319_11104243	Not Available	743
3300032160|Ga0311301_11554963	Not Available	809
3300032180|Ga0307471_102327976	Not Available	676
3300032770|Ga0335085_11616212	Not Available	671
3300032783|Ga0335079_10597130	Not Available	1165
3300032783|Ga0335079_12361571	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503
3300032805|Ga0335078_11903032	Not Available	641
3300032892|Ga0335081_11743368	Not Available	676
3300032898|Ga0335072_11803862	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504
3300032955|Ga0335076_11717691	Not Available	516
3300033158|Ga0335077_12175681	Not Available	510
3300033402|Ga0326728_10513367	Not Available	969
3300033828|Ga0334850_119028	Not Available	513

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.47%
Aquatic	Environmental → Aquatic	23.53%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	60.78%
Freshwater	Environmental → Aquatic → Freshwater	21.57%
Peat	Environmental → Terrestrial → Peat	15.69%
Sediment	Environmental → Aquatic → Sediment	1.96%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.25%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	21.57%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	15.69%
Loam	Environmental → Terrestrial → Soil → Loam	12.75%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.96%

Subtype

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	21.57%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	15.69%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.69%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	15.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.75%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.80%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	5.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.96%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.98%

Habitat

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.63%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	8.82%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	8.82%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	7.84%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	7.84%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	6.86%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.86%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	5.88%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.88%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	4.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.94%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.94%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.96%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.96%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.96%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.98%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.98%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.98%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.98%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.98%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental
3300004099	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF236 (Metagenome Metatranscriptome)	Environmental
3300004594	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 73 (Metagenome Metatranscriptome)	Environmental
3300004608	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 9 (Metagenome Metatranscriptome)	Environmental
3300004612	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 53 (Metagenome Metatranscriptome)	Environmental
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental
3300009634	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150	Environmental
3300009643	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40	Environmental
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental
3300009762	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40	Environmental
3300010379	Sb_50d combined assembly	Environmental
3300011088	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 62 (Metagenome Metatranscriptome) (version 2)	Environmental
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental
3300016701	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaT (Metagenome Metatranscriptome)	Environmental
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental
3300019242	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaT (Metagenome Metatranscriptome)	Environmental
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental
3300022507	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-M (Metagenome Metatranscriptome)	Environmental
3300022525	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)	Environmental
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental
3300025406	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10 (SPAdes)	Environmental
3300025414	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10 (SPAdes)	Environmental
3300025507	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40 (SPAdes)	Environmental
3300026998	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF046 (SPAdes)	Environmental
3300026999	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF044 (SPAdes)	Environmental
3300027562	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)	Environmental
3300027696	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)	Environmental
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental
3300028863	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_1	Environmental
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental
3300029907	I_Bog_N1 coassembly	Environmental
3300029915	III_Bog_E1 coassembly	Environmental
3300029943	I_Palsa_N3 coassembly	Environmental
3300029951	III_Palsa_N1 coassembly	Environmental
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental
3300030963	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU5 (Metagenome Metatranscriptome)	Environmental
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental
3300031259	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E1_3	Environmental
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental
3300033828	Peat soil microbial communities from Stordalen Mire, Sweden - 715 P1 1-5	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_104850852	3300001593	Forest Soil	MDIERVRKQLQESALREFPNPERVGCPDPETLGGMSRRIIQMT
JGIcombinedJ26739_1011310452	3300002245	Forest Soil	MNIDRVRKELQESALRDFPNPERVGCPDAETLAGMSRRIIQMTQDQL
JGIcombinedJ51221_104816832	3300003505	Forest Soil	MNIDRVRKELQESALREFPNPERVGCPDAETLAGMSRRIIQMTQDQLHHV
Ga0058900_14221552	3300004099	Forest Soil	MDIERVRKQLQESALREFPNPERVGCPDPPVLDAISRRKRGMTQEQLHHITHCS
Ga0068976_11756422	3300004594	Peatlands Soil	MDIERVRKELQESALREFPNPERIGCPDPETLGGMSRRIIQM
Ga0068924_12583921	3300004608	Peatlands Soil	MNIDRVRKELQESALREFPNPERVGCPDAETLASMSWRIIQMTQDQLHHVTH
Ga0068961_12882042	3300004612	Peatlands Soil	MNIDRVRKELQESALRELPNPERVGCPDAETLAGMSRRIIQMTQDQLHHVTHCSPCFQT
Ga0070731_106527562	3300005538	Surface Soil	MNIDRVRKELQESALRDFPNPERVGCPDAETLAGMSRRIIQMTQDQLHH
Ga0070733_103841661	3300005541	Surface Soil	VRKELQASALREFPNPERVGCPDPPVLDAISRRKMEM
Ga0070761_103433873	3300005591	Soil	MNIDRVRKELQESALRDFPNPERVGCPDAETLAGMSRRIIQMTQ
Ga0070761_103549441	3300005591	Soil	MDIERVRKELQESALREFPNPERIGCPDPEILAGMSRGIVPMTQ
Ga0075019_101541303	3300006086	Watersheds	MDIERVRKELQESALREFPNPERIGCPDPETLGGMSRRIIQMTQDQL
Ga0070765_1006648142	3300006176	Soil	MDIERVRQELQESALREFPNPERNGCPAPAALEEMSRRHAEMTQE
Ga0116221_11921792	3300009523	Peatlands Soil	MDIERVRKELQESALREFPNPERIGCPDPETFGGMSRR
Ga0116124_11682141	3300009634	Peatland	MDIERVRQELQESALREFPNPERAGCPAPAALEGMSRRRAKMTQEQLHHITHCSPC
Ga0116110_10614743	3300009643	Peatland	MDIERVRKELQASALREFPNPERVGCPDPAVLDAMSRRTIEITQSQ
Ga0116215_13985962	3300009672	Peatlands Soil	MDIERVRKELQESALREFPNPERIGCPDPETLGGMSRRII
Ga0116130_10352321	3300009762	Peatland	MDIERIRKELQESALREFPNPERIGCPDPETLGGMSRRIIQMTQDQLHHVTHCS
Ga0136449_1014033452	3300010379	Peatlands Soil	MDIERVRKQLQESALREFPNPERIGCPDPETLGGMS
Ga0138576_12781782	3300011088	Peatlands Soil	MDIERVRKELQESALREFPNPERIGCPDPETLGGMSRRIIQMTQDQLH
Ga0137392_110019002	3300011269	Vadose Zone Soil	VRKELQESALREFPNPERVGCPDQETLAGMSRRIIR*
Ga0181517_105204982	3300014160	Bog	MDIERVRKELQESALREFPNPERIGCPDAETLGGMSRRIIQMTQDQLHHV
Ga0181538_105056701	3300014162	Bog	MDIERVRKELQASALREFPNPERVGCPDPAVLDAMSRRTIEITQSQLHHITHCSP
Ga0181532_101799573	3300014164	Bog	MDIERVRKELQASALREFPNPERVGCPDPAVLDAMS
Ga0181534_101555603	3300014168	Bog	MDIERIRKELQESALREFPNPERIGCPDPEILGGMSRRII
Ga0181534_106636251	3300014168	Bog	MNIERVRKELQASALREFPNPERVGCPDPPALDAISRRK
Ga0181531_101296803	3300014169	Bog	MDIERVRQELQESALREFPNPERAGCPAPAALEAMSRRSAEMTPE
Ga0181531_105330541	3300014169	Bog	MDIERVRKQLQESALREFPNPERVGCPDPETLGGMSRRIIQMTQ
Ga0182040_119598711	3300016387	Soil	MDIDRVRKELQESALREFPNPERVGCPDAETLAGMSRRIIQMTQEQLHHVTH
Ga0181509_12823801	3300016701	Peatland	MDIERVRKELQASALREFPNPERVGCPDPAVLDAMSRRTIEITQSQLHHITHC
Ga0187879_104515352	3300017946	Peatland	MDIERIRKELQESALREFPNPERIGCPDPEILGGMSRRIIQM
Ga0187847_102570331	3300017948	Peatland	MDIERLRQELQESALTEFPNPERAGCPAPAALEGMSLRRAEMTQEQLHHITHCSPCLKAF
Ga0187884_102769672	3300018009	Peatland	MDIERIRKELQESALREFPNPERIGCPDPEILGGMSRRIIQMTQD
Ga0187875_106961351	3300018035	Peatland	MDIERVRQELQESALREFPNPERAGCPAPAALEGMS
Ga0187883_101641743	3300018037	Peatland	MDIERLRQELQESALREFPNPERADCPAPAALEGMSRRHAEMTQEQP
Ga0187887_108067292	3300018043	Peatland	MDIERVRKELQESALREFPNPERIGCPDPETLGGMSRRIIQMTQDQLHHVTHCSP
Ga0187766_108521282	3300018058	Tropical Peatland	MDIERVRKELQASALREFPNPDRVGCPDPAVLDAISRR
Ga0187769_108703052	3300018086	Tropical Peatland	VRKELQASALREFPNPDRVGCPNPAVLDAISRRKTEM
Ga0181502_13497152	3300019242	Peatland	MDIERVRKELQASALREFPNPERVGCPDPAVLDAMSRRTIEI
Ga0182025_13742811	3300019786	Permafrost	MDIELVRKELQESALREFPNPERIGCPDPETLGGMSRR
Ga0210395_102840513	3300020582	Soil	MDIERVRKELQESALREFPNPERIGCPDPETLGGMSRRIIQMTQDQLHHVTHCS
Ga0210405_111593781	3300021171	Soil	MDLERVRKELQAAALREFPNPERIGCPEPGVLDDMSRRKIEMTQAQLHH
Ga0210388_112529122	3300021181	Soil	MDIERVRKELQASALREFPNPERVGCPDPPVLDAISRRKTEMTQEQL
Ga0210397_112602532	3300021403	Soil	MDIERVRKELQASSLWEFPNPERVGCPDPPVLDAISRRKTEMTQEQLHHITHCSP
Ga0210389_107264612	3300021404	Soil	MNIDRVRKELQESALREFPNPERVGCPDAETLAGMSRRIIQM
Ga0210387_109837861	3300021405	Soil	MDIERVRQELQESALREFPNPERDGCPSPDALEEMSRRHSE
Ga0210394_105883382	3300021420	Soil	MNIDRVRKELQESALREFPNPERVGCPDAETLAGMSRRIIQ
Ga0210384_101695071	3300021432	Soil	MNIDRVRKELQESALRDFPNPERVGCPDAETLAGMSRRIIQMTQDQLHHVTH
Ga0210391_102148631	3300021433	Soil	MDLERVRKELQAAALREFPNPERIGCPEPGVLDDMSRRKI
Ga0210391_108425231	3300021433	Soil	MNLERVRKELQAAALREFPNPERVGCPEPGVLGDMSRQNV
Ga0210398_111029012	3300021477	Soil	MDIERVRQELQESALREFPNPERAGCPAPAALEAM
Ga0210402_107186303	3300021478	Soil	MNIDRVRKELQESALREFPNPERVGCPDAETLAGMSRRIIQMTQDQLH
Ga0210410_105560671	3300021479	Soil	MNIDRVRKELQESALREFPNPERVGCPDAESLAGMSRRIIQMTQD
Ga0210409_104669801	3300021559	Soil	MNIDRVRKELQESALRDFPNPERVGCPDAETLAGMSRRIIQMTQDQLHHVTHCS
Ga0210409_111065471	3300021559	Soil	MDIDRVRKELQESALRDFPNPERVGCPDAETLAGMSRRIIQMTQDQLHH
Ga0222729_10467362	3300022507	Soil	MDIERVRKELQESALREFPNPERIGCPDPETLGGMSRRLIQMTQDQ
Ga0242656_10479371	3300022525	Soil	MNIDRVRKELQESALREFPNPERVGCPDAETLAGMSRRIIQMTQDQLHHVTH
Ga0242665_103767372	3300022724	Soil	MNIDRVRKELQESALREFPNPERVGCPDAETLAGMSRRIIQMTQDQLHH
Ga0224564_10635231	3300024271	Soil	MDIERVRKELQESALKEFPNPERIGCPDPETLGGMSRRIIQMTQDQLH
Ga0208035_10702262	3300025406	Peatland	MDIERVRKELQESALREFPNPERIGCPDPETLGGMSRRIIQMTQDQLHHVTHC
Ga0208935_10311022	3300025414	Peatland	MNIDRVRKELQESALREFPNPERVGCPDAETLAGM
Ga0208188_11312042	3300025507	Peatland	MDIERVRKELQASALREFPNPERVGCPDPAVLDAMSR
Ga0208369_10308252	3300026998	Forest Soil	MNIDRVRKELQESALREFPNPERVGCPDAETLAGMSRRIIQMTQDQLHHVTHC
Ga0207949_10267192	3300026999	Forest Soil	MNIDRVRKELQESALRDFPNPERVGCPDAETLAGM
Ga0209735_10487471	3300027562	Forest Soil	MDIERVRKELQESALREFPNPERIGCPDPETLGGMS
Ga0208696_11584982	3300027696	Peatlands Soil	MDIERVRKELQESALREFPNPERIGCPDPETLGGMSRRIIQMTQDQLHH
Ga0209139_101238713	3300027795	Bog Forest Soil	MDIERVRKELQESALREFPNPERIGCPDPETLGGM
Ga0209274_101827991	3300027853	Soil	MNIDRVRKELQESALRDFPNPERVGCPDAETLAGMSRRIIQM
Ga0209274_103057312	3300027853	Soil	MDIERVRQELQESALREFPNPERAGCPAPAALEAMSRRRAE
Ga0209275_101842161	3300027884	Soil	MDIERVRKELQESALREFPNPERIGCPDPETLGGMSRRLIQMTQD
Ga0209067_101028221	3300027898	Watersheds	MDIERVRKELQESALREFPNPERIGCPDPETLGGMSRRIIEMTQDQLHH
Ga0209168_103965431	3300027986	Surface Soil	MDIERVRKELQASALREFPNPERVGCPDPPVLDAISRRKTEMTQEQLHHITH
Ga0302219_102855132	3300028747	Palsa	MDIERVRKELQESALREFPNPERIGCPDPETLGGMSRRIIQMTQDQLHHV
Ga0302225_101985801	3300028780	Palsa	MNIDRVRKELQESALREFPNPERVGCPDAETLAGMSRRIIQMT
Ga0302218_101359061	3300028863	Palsa	MDIERVRKELQESALREFPNPERIGCPDPETLGGMSRRIIQMTQDQLHHVT
Ga0222749_100441683	3300029636	Soil	MNIDRVRKELQESALREFPNPERVGCPDAETLAGMSRRIIQMTQDQLHHVT
Ga0311329_105464792	3300029907	Bog	MDIERVRQELQESALREFPNPERTGCPDPGTLDGMSRRRVEMTQAQ
Ga0311358_100631088	3300029915	Bog	MDIERLRQELQESALTEFPNPERAGCPAPAALEGMSRRRAEMTQEQLHH
Ga0311340_104502371	3300029943	Palsa	MNIDRVRKELQEAALREFPNPERVGCPDAETLAGMSRRIIQMTQDQLHHVT
Ga0311371_118958161	3300029951	Palsa	MNIDRVRKELQESALREFPNPERVGCPDAETLAGMSRRIIQMTQD
Ga0311371_125756752	3300029951	Palsa	MDIERVRKQLQESALREFPNPERVGCPDPETLGGMSRRIIQMTQDQLHHVTHC
Ga0302177_105051601	3300030053	Palsa	MDIERVRKELQESALREFPNPERIGCPDPETLGGMSRRIIQ
Ga0302179_100651071	3300030058	Palsa	MDIERVRKELQESALREFPNPERIGCPDPETLGGMSRRIIQMTQ
Ga0307482_11662971	3300030730	Hardwood Forest Soil	MNIDRVRKELQESALREFPNPERVGCPDAETLAGMSRRII
Ga0265768_1069682	3300030963	Soil	MNIDRVRKELQESALREFPNPERVGCPDAETLARMSRRIIQMTQDQLH
Ga0265760_102064422	3300031090	Soil	MDIERVRKELQESALREFPNPERIGCPDPETLGRMSR
Ga0302325_128482942	3300031234	Palsa	MDIERLRQELQESALTEFPNPERVGCPAPAALEGMSRRRAEMTQEQLHHITHCSP
Ga0302187_105792451	3300031259	Bog	MDIERLRQELQESALTEFPNPERAGCPAPAALEGMSRRRAEMTQEQLHHITHCSPCLKAF
Ga0302320_120023862	3300031524	Bog	MDIERVRKELQESALREFPNPERIGCPDPETLGGMSRRI
Ga0302319_111042432	3300031788	Bog	MDIERVRKELQESALREFPNPERIGCPDPETLGGMSRRIIQMTQEQLHHV
Ga0311301_115549631	3300032160	Peatlands Soil	MDIERVRKELQESALREFPNPERIGCPDPETLGGMSRRIIQMTQDQ
Ga0307471_1023279761	3300032180	Hardwood Forest Soil	MNIDRVRKELQESALREFPNPERVGCPDAETLACM
Ga0335085_116162122	3300032770	Soil	MDIDRVRKELQESALREFPNPQRVGCPDPETLADMSRRIIQMTQDQLHHV
Ga0335079_105971301	3300032783	Soil	MDFDRVRKELQASALREFPNPDRVGCPDPAVLDAISRRKTEM
Ga0335079_123615712	3300032783	Soil	MDIERVRKELQASALREFPNPDRVGCPDPAVLDAISRRETEMTQEQLHHVTHCSPCFQTF
Ga0335078_119030321	3300032805	Soil	MDIERVRKELQASALREFPNPDRVGCPDPAVLDAISRRKTEMTQEQLHHV
Ga0335081_117433681	3300032892	Soil	MDIERVRKELQASALREFPNPERVGCPDPAVLDAISRRRSEMTQEQLHH
Ga0335072_118038622	3300032898	Soil	MDIERVRKELQASALREFPNPDRVGCPDPAVLDAISRRETEMTQEQLHHVTHCSPCFQTFLSI
Ga0335076_117176911	3300032955	Soil	MDIERVRKELQESALREFPNPERIGCPDPEILAGMSRGIVPMTQP
Ga0335077_121756812	3300033158	Soil	MDIERVRKELQASALREFPNPERVGCPDPAVLQAMSRRTKEITQSQL
Ga0326728_105133671	3300033402	Peat Soil	MDIERVRKELQAAALREFPNPDRIGCPDPAVLDKMSRREVEMTQEQLHHVTHCSLCFHAF
Ga0334850_119028_403_513	3300033828	Soil	MDIERVRKELQESALREFPNPERIGCPDPETLGGMSR