Metagenome / Metatranscriptome Family F101537

Basic Information
Family ID	F101537
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	109 residues
Representative Sequence	MAALAIPIEVQEQSLSQSTVILQVKFGLLGDSRKVSASQVEVDTDKQLLRVAKKILVSVEFEAIRQLDRKVKKYLDSVCVPFETGTRFLAVPLIEDVDRKLREFERERA
Number of Associated Samples	92
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	94.12 %
% of genes from short scaffolds (< 2000 bps)	93.14 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (55.882 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (13.725 % of family members)
Environment Ontology (ENVO)	Unclassified (24.510 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (36.275 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 43.12% β-sheet: 19.27% Coil/Unstructured: 37.61%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF13353	Fer4_12	5.88
PF06868	DUF1257	3.92
PF11348	DUF3150	1.96
PF11154	DUF2934	0.98
PF00216	Bac_DNA_binding	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	0.98

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	55.88 %
Unclassified	root	N/A	44.12 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	55.88 %
Unclassified	root	N/A	44.12 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	55.88 %
Unclassified	root	N/A	44.12 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.12 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	19.61 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	19.61 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	5.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.12 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	10.78 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	9.80 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	5.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.12 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	10.78 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	9.80 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	5.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.12 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	9.80 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	9.80 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	5.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.12 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	9.80 %
Nostocaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae	5.88 %
Bryobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter	5.88 %
unclassified Bryobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae	3.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.12 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	9.80 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	5.88 %
Nostocaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae	5.88 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	3.92 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001084\|JGI12648J13191_1023618	Not Available	598	Open in IMG/M
3300001131\|JGI12631J13338_1028347	Not Available	578	Open in IMG/M
3300001175\|JGI12649J13570_1029395	Not Available	577	Open in IMG/M
3300004082\|Ga0062384_100798347	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300005534\|Ga0070735_10154124	All Organisms → cellular organisms → Bacteria	1423	Open in IMG/M
3300005712\|Ga0070764_10276832	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300006059\|Ga0075017_100313311	All Organisms → cellular organisms → Bacteria	1161	Open in IMG/M
3300006059\|Ga0075017_101280485	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	575	Open in IMG/M
3300006162\|Ga0075030_101039896	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300006176\|Ga0070765_101572664	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300006354\|Ga0075021_10767748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	622	Open in IMG/M
3300006797\|Ga0066659_10850250	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300006893\|Ga0073928_10381834	All Organisms → cellular organisms → Bacteria	1035	Open in IMG/M
3300009518\|Ga0116128_1115108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	785	Open in IMG/M
3300009624\|Ga0116105_1080209	Not Available	792	Open in IMG/M
3300009665\|Ga0116135_1335267	Not Available	603	Open in IMG/M
3300009764\|Ga0116134_1092165	All Organisms → cellular organisms → Bacteria → Acidobacteria	1104	Open in IMG/M
3300010375\|Ga0105239_13479334	Not Available	512	Open in IMG/M
3300012285\|Ga0137370_10577923	All Organisms → cellular organisms → Bacteria → Proteobacteria	693	Open in IMG/M
3300012355\|Ga0137369_10123080	All Organisms → cellular organisms → Bacteria	2095	Open in IMG/M
3300014156\|Ga0181518_10359588	Not Available	711	Open in IMG/M
3300014159\|Ga0181530_10063612	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	2338	Open in IMG/M
3300014164\|Ga0181532_10235070	All Organisms → cellular organisms → Bacteria → Acidobacteria	1059	Open in IMG/M
3300014165\|Ga0181523_10186853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1205	Open in IMG/M
3300014492\|Ga0182013_10492235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	640	Open in IMG/M
3300014492\|Ga0182013_10649668	Not Available	533	Open in IMG/M
3300014495\|Ga0182015_11048270	Not Available	503	Open in IMG/M
3300014499\|Ga0182012_10724344	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	633	Open in IMG/M
3300014501\|Ga0182024_11794707	Not Available	686	Open in IMG/M
3300016750\|Ga0181505_10659874	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae	747	Open in IMG/M
3300017935\|Ga0187848_10042973	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	2212	Open in IMG/M
3300017948\|Ga0187847_10731168	Not Available	558	Open in IMG/M
3300017948\|Ga0187847_10814011	Not Available	529	Open in IMG/M
3300017948\|Ga0187847_10882319	Not Available	509	Open in IMG/M
3300018013\|Ga0187873_1037187	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	2224	Open in IMG/M
3300018021\|Ga0187882_1298995	All Organisms → cellular organisms → Bacteria → Proteobacteria	617	Open in IMG/M
3300018035\|Ga0187875_10234279	Not Available	1005	Open in IMG/M
3300018038\|Ga0187855_10150092	All Organisms → cellular organisms → Bacteria → Acidobacteria	1391	Open in IMG/M
3300018040\|Ga0187862_10676993	All Organisms → cellular organisms → Bacteria → Proteobacteria	605	Open in IMG/M
3300018043\|Ga0187887_10345223	Not Available	878	Open in IMG/M
3300018043\|Ga0187887_10437817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	771	Open in IMG/M
3300018047\|Ga0187859_10081568	All Organisms → cellular organisms → Bacteria → Acidobacteria	1703	Open in IMG/M
3300018047\|Ga0187859_10360369	All Organisms → cellular organisms → Bacteria → Proteobacteria	794	Open in IMG/M
3300019787\|Ga0182031_1468129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae	1458	Open in IMG/M
3300019788\|Ga0182028_1140811	All Organisms → cellular organisms → Bacteria → Acidobacteria	1046	Open in IMG/M
3300020581\|Ga0210399_11405011	Not Available	545	Open in IMG/M
3300020583\|Ga0210401_11235259	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae	605	Open in IMG/M
3300021088\|Ga0210404_10302596	Not Available	880	Open in IMG/M
3300021181\|Ga0210388_10798301	Not Available	818	Open in IMG/M
3300021401\|Ga0210393_10502140	Not Available	991	Open in IMG/M
3300021477\|Ga0210398_10168636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1783	Open in IMG/M
3300021479\|Ga0210410_11536979	Not Available	559	Open in IMG/M
3300021559\|Ga0210409_11502541	Not Available	549	Open in IMG/M
3300025454\|Ga0208039_1084638	Not Available	554	Open in IMG/M
3300025500\|Ga0208686_1109976	Not Available	579	Open in IMG/M
3300025612\|Ga0208691_1147221	All Organisms → cellular organisms → Bacteria → Proteobacteria	531	Open in IMG/M
3300025906\|Ga0207699_10290750	All Organisms → cellular organisms → Bacteria	1138	Open in IMG/M
3300026557\|Ga0179587_10343838	All Organisms → cellular organisms → Bacteria → Acidobacteria	967	Open in IMG/M
3300027559\|Ga0209222_1054952	Not Available	766	Open in IMG/M
3300027652\|Ga0209007_1068438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae	897	Open in IMG/M
3300027862\|Ga0209701_10418365	Not Available	744	Open in IMG/M
3300027882\|Ga0209590_10496783	All Organisms → cellular organisms → Bacteria → Acidobacteria	788	Open in IMG/M
3300027884\|Ga0209275_10523638	Not Available	677	Open in IMG/M
3300027910\|Ga0209583_10003532	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	4386	Open in IMG/M
3300028016\|Ga0265354_1023675	Not Available	587	Open in IMG/M
3300028762\|Ga0302202_10379623	Not Available	661	Open in IMG/M
3300028806\|Ga0302221_10311837	Not Available	686	Open in IMG/M
3300028906\|Ga0308309_10218311	All Organisms → cellular organisms → Bacteria → Acidobacteria	1580	Open in IMG/M
3300029636\|Ga0222749_10477302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae	672	Open in IMG/M
3300029908\|Ga0311341_10512404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	683	Open in IMG/M
3300029911\|Ga0311361_10450341	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	1316	Open in IMG/M
3300029913\|Ga0311362_10825501	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	761	Open in IMG/M
3300029943\|Ga0311340_11008994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	683	Open in IMG/M
3300029944\|Ga0311352_11499453	Not Available	505	Open in IMG/M
3300029999\|Ga0311339_11180661	Not Available	702	Open in IMG/M
3300030056\|Ga0302181_10282036	Not Available	743	Open in IMG/M
3300030503\|Ga0311370_11939595	All Organisms → cellular organisms → Bacteria → Proteobacteria	591	Open in IMG/M
3300030617\|Ga0311356_11630087	Not Available	580	Open in IMG/M
3300030737\|Ga0302310_10595987	Not Available	584	Open in IMG/M
3300030815\|Ga0265746_1033280	All Organisms → cellular organisms → Bacteria → Proteobacteria	671	Open in IMG/M
3300030878\|Ga0265770_1132046	Not Available	534	Open in IMG/M
3300030991\|Ga0073994_11981451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	622	Open in IMG/M
3300031122\|Ga0170822_10194340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae	690	Open in IMG/M
3300031122\|Ga0170822_10852475	Not Available	502	Open in IMG/M
3300031231\|Ga0170824_110423465	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	664	Open in IMG/M
3300031234\|Ga0302325_11026934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1122	Open in IMG/M
3300031236\|Ga0302324_100469451	All Organisms → cellular organisms → Bacteria	1849	Open in IMG/M
3300031236\|Ga0302324_103285607	All Organisms → cellular organisms → Bacteria → Proteobacteria	530	Open in IMG/M
3300031261\|Ga0302140_11095183	All Organisms → cellular organisms → Bacteria → Proteobacteria	540	Open in IMG/M
3300031524\|Ga0302320_11041710	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	862	Open in IMG/M
3300031524\|Ga0302320_11709805	Not Available	605	Open in IMG/M
3300031525\|Ga0302326_12709625	Not Available	615	Open in IMG/M
3300031708\|Ga0310686_103632386	Not Available	690	Open in IMG/M
3300031708\|Ga0310686_108823323	All Organisms → cellular organisms → Bacteria → Acidobacteria	1657	Open in IMG/M
3300031718\|Ga0307474_11330657	Not Available	567	Open in IMG/M
3300031788\|Ga0302319_10346685	All Organisms → cellular organisms → Bacteria → Acidobacteria	1699	Open in IMG/M
3300032160\|Ga0311301_10353121	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	2297	Open in IMG/M
3300032783\|Ga0335079_12317523	Not Available	509	Open in IMG/M
3300032805\|Ga0335078_11222988	Not Available	865	Open in IMG/M
3300032892\|Ga0335081_12112929	Not Available	596	Open in IMG/M
3300033158\|Ga0335077_11810094	Not Available	573	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.04%
Host-Associated	Host-Associated	1.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.67%
Aquatic	Environmental → Aquatic	31.37%
Plants	Host-Associated → Plants	1.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	46.08%
Freshwater	Environmental → Aquatic → Freshwater	25.49%
Peat	Environmental → Terrestrial → Peat	20.59%
Sediment	Environmental → Aquatic → Sediment	4.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.96%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.98%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	25.49%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	25.49%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	20.59%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.78%
Loam	Environmental → Terrestrial → Soil → Loam	9.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.90%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.98%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	20.59%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	18.63%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	13.73%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.82%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	6.86%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	6.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.90%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.92%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.98%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	13.73%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	12.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.80%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	7.84%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	6.86%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.90%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.90%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.90%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.92%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.92%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	3.92%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.94%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.98%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.98%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.98%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.98%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.98%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.98%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.98%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.98%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.98%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001084	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1	Environmental	Open in IMG/M
3300001131	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1	Environmental	Open in IMG/M
3300001175	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009518	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300018013	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100	Environmental	Open in IMG/M
3300018021	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300019788	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300025454	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150 (SPAdes)	Environmental	Open in IMG/M
3300025500	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40 (SPAdes)	Environmental	Open in IMG/M
3300025612	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027559	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027652	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300028016	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1	Host-Associated	Open in IMG/M
3300028762	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_3	Environmental	Open in IMG/M
3300028806	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029908	II_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029913	III_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030056	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030737	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_2	Environmental	Open in IMG/M
3300030815	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030878	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031261	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_1	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12648J13191_10236182	3300001084	Forest Soil	MAALAIPIEVQEQSLSQSTVILQVKFGLLGDSRKVSASQVEVDTDKQLLRVAKKILVSAEFEAIRQLDRKVKKYLDSVCVPFETGTRFLAVPLIEDVDRKLREFERERADLVDRFLDSYPTL
JGI12631J13338_10283472	3300001131	Forest Soil	MAALAIPIEVQEQSLSQSTVILQVKFGLLGDSRKVSASQVEVDTDKQLLRVAKKILVSAEFEAIRQLDRKVKKYLDSVCVPFETGTRFLAVPLIEDVDRKLREFERERADFVDRFLDSYP
JGI12649J13570_10293952	3300001175	Forest Soil	MAALAIPIEVQEQSLSQSTVILQVKFGLLGDSRKVSASQVEVDTDKQLLRVAKKILVSAEFEAIRQLDRKVKKYLDSVCVPFETGTRFLAVPLIE
Ga0062384_1007983471	3300004082	Bog Forest Soil	MAALAIPIARQEQSLSESTVILQVKFGLLGDSRKVSSSQVEVDTDKQLLRVAKKILVSNEFEAIKQIDRRVKKYLDSVCVPFETGTRFLAVPLIEDVDCKLREFERDRS
Ga0070735_101541244	3300005534	Surface Soil	MAALAIPIEVQEQSLSQSTVILQVKFGLLGDSRKVSASQVEVDTDKQLLRVAKKILVSVEFEAIRQLDRKVKKYLDSVCVPFETGTRFLAVPLIEDVDRKLREFERERADL
Ga0070764_102768323	3300005712	Soil	MAALAIPIEVQEQSLSQSTVILQVKFGLLGDSRKVSASQVEVDTDKQLLRVAKKILVSVEFEAIRQLDRRVKKYLDSVCVPFETGTRFLAVPLIEDVDRKLREFERERA
Ga0075017_1003133113	3300006059	Watersheds	MAALAIPMEVQEQSLSQSTVILQVKFGLLGDSRKVSASQVEVDTDKQLLRVAKKILVSAEFEAIRQLDRKVKKYLDSVCVPFETGTRFLAVPLIEDVDRKLREFE
Ga0075017_1012804851	3300006059	Watersheds	MAALAIPIARQEQSLSESTVILQVKFGLLGDSRKVSSSQVEVDTDKQLLRVAKKILVSNEFEAIKQIDRRVKKYLDSVCVPFEPGTRF
Ga0075030_1010398961	3300006162	Watersheds	MAALAFPIEVQEQSLSQSTVILQVKFGLLGDSRKVSASQVEVDTDKQLLRVAKKILVSVEFEAIRQLDRKVKKYLDSVCVPFETGTRFLAVPLIEDVDRKLREFE
Ga0070765_1015726641	3300006176	Soil	MAALAIPIEVQEQSLSQSTVILQVKFGLLGDSRKVSASQVEVDTDKQLLRVAKKILVSAEFEAIRQLDRKVKKYLDSVCVPFETGTRFLAVPLIEDVDRKLREFERER
Ga0075021_107677482	3300006354	Watersheds	MAALAIPIEVQEQSLSQSTVILQVKFGLLGDSRKVSASQVEVDTDKQLLRVAKKILVSVEFEAIRQLDRKVKKYLDSVCVPFETGTRFLAVPLIEDVDRKLREFERERADLVDRFLDSYPTLCESMSDRL
Ga0066659_108502501	3300006797	Soil	MAALAIPIEVQEQSLSQSTVILQVKFGLLGDSRKVSASQVEVDTDKQLLRVAKKILVSAEFEAIRQLDRKVKKYLDSVCVPFETGTRFLAVPLIEDVDRKLREFERERA
Ga0073928_103818341	3300006893	Iron-Sulfur Acid Spring	MAALAIPIEVQEQSLSQSTVILQVKFGLLGDSRKVSASQVEVDTDKQLLRVAKKILVSVEFEAIRQLDRKVKKYLDSVCVPFE
Ga0116128_11151082	3300009518	Peatland	MAALAIPIEVQEQSLSQSTVILQVKFGLLGDSRKVSASQVEVDTDKQLLRVAKKILVSVEFEAIRQLDRKVKKYLDSVCVPFETGTRFLAVPLIEDVDRKLREFERERADLVD
Ga0116105_10802092	3300009624	Peatland	MAALAIPIARQEQSLSESTVILQVKFGLLGDSRKVSSSQVEVDTDKQLLRVAKKILVSNEFEAIRQIDRRVKKYLDSVCVPFETGTRFLAVPLIEDVDCKLREFERDRSELVDRFLDSYPTLC
Ga0116135_13352671	3300009665	Peatland	MAALAIPIARQEQSLSESTVILQVKFGLLGDSRKVSSSQVEVDTDKQLLRVAKKILVSNEFEAIKQIDRRVKKYLDSVCVPFETGTRFLAVPLIEDVDCKLREFDRDRSELVDRFLDSYPTLCESMSERLRV
Ga0116134_10921652	3300009764	Peatland	MAALAIPIARQEQSLSESTVILQVKFGLLGDSRKVSSSQVEVDTDKQLLRVAKKILVSNEFEAIKQIDRRVKKYLDSVCVPFETGTRFLAVPLI*
Ga0105239_134793341	3300010375	Corn Rhizosphere	MAALAIPIEVQEQSLSQSTVILQVKFGLLGDSRKVSASQVEVDTDKQLLRVAKKILVSAEFEAIRQLDRNVKKYLDSVCVPFETGTRFLAVPLIEDVDRKLREFERERADLVDRFLDSYPTLCESMSDRLRI
Ga0137370_105779231	3300012285	Vadose Zone Soil	MAALAIPIEVQEQSLSQSTVILQVKFGLLGDSRKVPTSQVEVDTDKQLLRVAKKILVSAEFEAIRQLDRKVKKYLDSVCVPFETGTRFLAVPLIEDVDRKLREFERERVDLVARFLDSYSTLC
Ga0137369_101230801	3300012355	Vadose Zone Soil	MAALAIPIEVQEQSLSQSTVILQVKFGLLGDSRKVSASQVEVDTDKQLLRVAKKILVSVEFEAIRQLDRKVKKYLDSVCVPFETGKRFLAVPLIEDVDRKLREFERER
Ga0181518_103595882	3300014156	Bog	MAALVIPIAKQEQSLSESTVILQVKFGVLGDSRKVSSSQVEVDTDKQLLRVAKKILVSNEFEAIRQIDRRVKKYLEGVCVPFETGTRFLAVPLIEDVDRKLHEFEGERAELVDRFLDSYPTLCESMSE
Ga0181530_100636125	3300014159	Bog	MAALVIPIAKQEQSLSESTVILQVKFGVLGDSRKVSSSQVEVDTDKQLLRVAKKILVSNEFEAIRQIDRRVKKYLEGVCVPFETGTRFLAVPLIEDVDRKLH
Ga0181532_102350702	3300014164	Bog	MAALAIPIARQEQSLSESTVILQVKFGLLGDSRKVSSSQVEVDTDKQLLRVAKKILVSNEFEAIKQIDRRVKKYLDSVCVPF*
Ga0181523_101868533	3300014165	Bog	MAALAIPIARQEQSLSESTVILQVKFGLLGDSRKVSSSQVEVDTDKQLLRVAKKILVSNEFEAIKQIDRRVKKYLDSVCVPFETGTRFLAVPLIEDVDWRLREFER
Ga0182013_104922352	3300014492	Bog	MAALAIPIARQEQSLSESTVILQVKFGLLGDSRKVSSSQVEVDTDKQLLRVAKKILVSNEFEAIKQIDRRVKKYLDSVCVPFETGTRFLAVPLI
Ga0182013_106496682	3300014492	Bog	MAALAIPIEVQEQSLSQSTVILQVKFGLLGDSRKVSASQVEVDTDKQLLRVAKKILVSVEFEAIRQLDRKVKKYLDSVCVPFETGTRFLAVPLIEDV
Ga0182015_110482701	3300014495	Palsa	MAALAIPIEVQEQSLSQSTVILQVKFGLLGDSRKVSASQVEVDTDKQLLRVAKKILVSAEFEAIRQLDRKVKKYLDSVCVPFETGTRFLAVPLIEDVDRKLRE
Ga0182012_107243442	3300014499	Bog	MAALAIPIAKPEQSLSESTVILQVKFGLLGDSRKVSNSQVEVDTDKQLLRVAKKILVSNEFEAIRQIDRKVKKYLDNICVPFETGTRFLAVPLIDDVD
Ga0182024_117947072	3300014501	Permafrost	MAALAIPIEVQEQSLSQSTVILQVKFGLLGDSRKVSASQVEVDTDKQLLRVAKKILVSVEFEAIRQLDRKVKKYLDSVCVPFETGTRFLAVPLIEDVDRKLREFER
Ga0181505_106598742	3300016750	Peatland	MAALAIPIEVQEQSLSQSTVILQVKFGLLGDSRKVSASQVEVDTDKQLLRVAKKILVSVEFEAIRQLDRKVKKYLDSVCVPFETGTRFLAVPLIEDVDRKLREFERERADLVDRFLDSYPTLCESMSERLRVL
Ga0187848_100429735	3300017935	Peatland	MAALVIPIAKQEQSLSESTVILQVKFGVLGDSRKVSSSQVEVDTDKQLLRVAKKILVSNEFEAIRQIDRRVKKYLEGVCVPFETGTRFLAVPLIE
Ga0187847_107311681	3300017948	Peatland	MAALAIPIAKPEQSLSESTVILQVKFGLLGDSRKVSNSQVEVDTDKQLLRVAKKILVSNEFEAIRQIDRKVKKYLDSICVPFETGTRFLAVPLIDDVDRKLHEFESERAELVDRFLDCNSSRG
Ga0187847_108140111	3300017948	Peatland	MAALVIPIAKQEQSLSESTVILQVKFGVLGDSRKVSSSQVEVDTDKQLLRVAKKILVSNEFEAIRQIDRRVKKYLEGVCVPFETGTRFLA
Ga0187847_108823191	3300017948	Peatland	MAALAIPIEVQEQSLSQSTVILQVKFGLLGDSRKVSASQVEVDTDKQLLRVAKKILVSAEFEAIRQLDRKVKKYLDSVCVPFETGTRFLAVPLIEDVD
Ga0187873_10371871	3300018013	Peatland	MAALVIPIAKQEQSLSESTVILQVKFGVLGDSRKVSSSQVEVDTDKQLLRVAKKILVSNEFEAIRQIDRRVKKYLEGVCVPFETGTRFLAVPLIEDVDRKLHEF
Ga0187882_12989952	3300018021	Peatland	MAALAIPIEVQEQSLSQSTVILQVKFGLLGDSRKVSASQVEVDTDKQLLRVAKKILVSVEFEAIRQLDRKVKKYLDSVCVPFETGTRFLAVPLIEDVDRKLREFERERADLVDRFLDSYPTLC
Ga0187875_102342791	3300018035	Peatland	MAALAIPIEVQEQSLSQSTVILQVKFGLLGDSRKVSASQVEVDTDKQLLRVAKKILVSVEFEAIRQLDRKVKKYLDSVCVPFETGTRFLAVPLIEDVDRKLREFERERAD
Ga0187855_101500924	3300018038	Peatland	MAALAIPIEVQEQSLSQSTVILQVKFGLLGDSRKVSASQVEVDTDKQLLRVAKKILVSVEFEAIRQLDRKVKKYLDSVCVPFETGTRFLAVPLIEDVDR
Ga0187862_106769931	3300018040	Peatland	MAALAIPIEVQEQSLSQSTVILQVKFGLLGDSRKVPASQVEVDTDKQLLRVAKKILVSAEFEAIRQLDRKVKKYLDSVCVPFETGTRFLAVPLIEDVDRKLREFERERAD
Ga0187887_103452232	3300018043	Peatland	MAALAVPIEVQEQSLSQSTVILQVKFGLLGDSRKVSASQVEVDTDKQLLRVAKKILVSVEFEAIRQLDRKVKKYLDSVCVPFETGTRFLAVPLIEDVDRKLREFERERVDLVDRFLDSY
Ga0187887_104378172	3300018043	Peatland	MAALAIPIARQEQSLSESTVILQVKFGLLGDSRKVSSSQVEVDTDKQLLRVAKKILVSNEFEAIKQIDRRVKKYLDSVCVPFETGTRFLAVPLIEDVDWRLREFERDRSELVDRFLDSYPTLCESMSE
Ga0187859_100815684	3300018047	Peatland	MAALVIPIAKQEQSLSESTVILQVKFGVLGDSRKVSSSQVEVDTDKQLLRVAKKILVSNEFEAIRQIDRRVKKYLEGVCVPFETGTRFLAVPLIEDVDRK
Ga0187859_103603692	3300018047	Peatland	MAALAIPIARQEQSLSESTVILQVKFGLLGDSRKVSSSQVEVDTDKQLLRVAKKILVSNEFEAIKQIDRRVKKYLDSVCVPFETGTRFLAVPLIEDVDCKLREFERDRSELVDRFLDSYPTLCESM
Ga0182031_14681294	3300019787	Bog	MAALAIPIEVQEQSLSQSTVILQVKFGLLGDSRKVSASQVEVDTDKQLLRVAKKILVSVEFEAIRQLDRKVKKYLDSVCVPFETGTRFLAVP
Ga0182028_11408111	3300019788	Fen	MAALVIPIAKQEQSLSESTVILQVKFGVLGDSRKVSSSQVEVDTDKQLLRVAKKILVSNEFEAIRQIDRRVKKYLEGVCVPFETGTRFLAVPLIEDVDRKLHEFEGERAELNAP
Ga0210399_114050111	3300020581	Soil	MAALAIPIEVQEQSLSQSTVILQVKFGLLGDSRKVSASQVEVDTDKQLLRVAKKILVSVEFEAIRQLDRKVKKYLDSVCVPFETGTRFLAVPLIEDVDRKLRE
Ga0210401_112352591	3300020583	Soil	MAALAIPIEVQEQSLSQSTVILQVKFGLLGDSRKVSASQVEVDTDKQLLRVAKKILVSAEFEAIRQLDRKVKKYLDSVCVPFETGTRF
Ga0210404_103025963	3300021088	Soil	MAALAIPIEVQEQSLSQSTVILQVKFGLLGDSRKVSASQVEVDTDKQLLRVAKKILVSAEFEAIRQLDRKVKKYLDSVCVPFETGTRFLAVPLIEDVDRK
Ga0210388_107983011	3300021181	Soil	MAALAIPIEVQEQSLSQSTVILQVKFGLLGDSRKVSASQVEVDTDKQLLRVAKKILVSVEFEAIRQLDRKVKKYLDSVCVPFETGTRFLAVPLIEDVDRKLREFERERADLVDRFLDSY
Ga0210393_105021401	3300021401	Soil	MAALAIPIEVQEQSLSQSTVILQVKFGLLGDSRKVSASQVEVDTDKQLLRVAKKILVSVEFEAIRQLDRKVKKYLDSVCVPFETGTRFLAVPLIEDVDRKLREFERERADLVDRFLDSYPTL
Ga0210398_101686361	3300021477	Soil	MAALAIPIARQEQSLSESTVILQVKFGLLGDSRKVSSSQVEVDTDKQLLRVAKKILVSNEFEAIKQIDRRVKKYLDSVCVPFETGTRFLAVPLIEDVDCKL
Ga0210410_115369791	3300021479	Soil	MAALAIPIARQEQSLSESTVILQVKFGLLGDSRKVSSSQVEVDTDKQLLRVAKKILVSNEFEAIKQIDRRVKKYLDSVCVPFETGTRFLAVPLIEDVDCKLREFERDRSELVDRFLDSYPTLCESMSE
Ga0210409_115025412	3300021559	Soil	MAALAIPIEVQEQSLSQSTVILQVKFGLLGDSRKVSASQVEVDTDKQLLRVAKKILVSAEFEAIRQLDRKVKKYLDSVCVPFETGTRFLAVPLIEDVDRKLREFERERADLGDRFLDSYP
Ga0208039_10846382	3300025454	Peatland	MAALVIPIAKQEQSLSESTVILQVKFGVLGDSRKVSSSQVEVDTDKQLLRVAKKILVSNEFEAIRQIDRRVKKYLEGVCVPFETGTRFLAVP
Ga0208686_11099762	3300025500	Peatland	MAALVIPIAKQEQSLSESTVILQVKFGLLGDSRKVSSSQVEVDTDKQLLRVAKKILVSNEFEAIRQIDRRVKKYLEGVCVPFETGTRFLAVPLIEDVDRKLHEFEGERAELVDR
Ga0208691_11472212	3300025612	Peatland	MAALAIPIARQEQSLSESTVILQVKFGLLGDSRKVSSSQVEVDTDKQLLRVAKKILVSNEFEAIKQIDRRVKKYLDSVCVPFETGTRFLAVPLIEDV
Ga0207699_102907501	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MAALAIPIEVQEQSLSQSTVILQVKFGLLGDSRKVSASQVEVDTDKQLLRVAKKILVSAEFEAIRQLDRKVKKYLDSVCVPFETGTRFLAVPLIEDVDRKLREFERERADLVDRFLDSY
Ga0179587_103438382	3300026557	Vadose Zone Soil	MAALAIPIEVQEQSLSQSTVILQVKFGLLGDSRKVSASQVEVDTDKQLLRVAKKILVSVEFEAIRQLDRKVKKYLDSVCVPFETGTRFLAVPLIEDVDRKLREF
Ga0209222_10549521	3300027559	Forest Soil	MAALAIPIEVQEQSLSQSTVILQVKFGLLGDSRKVSASQVEVDTDKQLLRVAKKILVSAEFEAIRQLDRKVKKYLDSVCVPFETGTRFLAVPLIEDVDRKLREFERERADFVDRF
Ga0209007_10684383	3300027652	Forest Soil	MAALAIPIEVQEQSLSQSTVILQVKFGLLGDSRKVSASQVEVDTDKQLLRVAKKILVSAKFEAIRQLDRKVKKYLDSVCVPFETGTRFLAVPLIEDVDRKLREFERERADLV
Ga0209701_104183652	3300027862	Vadose Zone Soil	MAALAIPIEVQEQSLSQSTVILQVKFGLLGDSRKVSASQVEVDTDKQLLRVAKKILVSAEFEAIRQLDRKVKKYLDSVCVPFETGTRFLAVPLIEDVDRKLREFERERADLVDRFLDSYPTLCESMS
Ga0209590_104967831	3300027882	Vadose Zone Soil	MAALAIPIEVQEQSLSQSTVILQVKFGLLGDSRKVSASQVEVDTDKQLLRVAKKILVSVEFEAIRQLDRKVKKYLDSVCVPFETGTRFLAVPLIEDVDRKLRELERERVDLVDRFLDSYPTLCESMRQVACSA
Ga0209275_105236381	3300027884	Soil	MAALAIPIARQEQSLSESTVILQVKFGLLGDSRKVSSSQVEVDTDKQLLRVAKKILVSNEFEAIKQIDRRVKKYLDSVCVPFETGTRFLAVPLIEDVDCKLREFERDRSELVDRFLDSYPTLCESMSERLRV
Ga0209583_100035321	3300027910	Watersheds	MAALAIPIEVQEQSLSQSTVILQVKFGLLGDSRKVSASQVEVDTDKQLLRVAKKILVSVEFEAIRQLDRKVKKYLDSVCVPFETGTRFLAVPLIEDVDRKLREFERERADLVDRFLDSYPTLCESM
Ga0265354_10236752	3300028016	Rhizosphere	MAALAIPIEVQEQSLSQSTVILQVKFGLLGDSRKVSASQVEVDTDKQLLRVAKKILVSAEFEAIRQLDRKVKKYLDSVCVPFETGTRFLAVPLIEDVDRKLREFERERADLVDRFLDSYPTLCESMSDRL
Ga0302202_103796232	3300028762	Bog	MAALAIPIEVQEQSLSQSTVILQVKFGLLGDSRKVSASQVEVDTDKQLLRVAKKILVSVEFEAIRQLDRKVKKYLDSVCVPFETGTRFLAVPLIEDVDRKLREFERERGDLVDRFLDSYPTLCE
Ga0302221_103118372	3300028806	Palsa	MAALAIPIEVQEQSLSQSTVILQVKFGLLGDSRKVSASQVEVDTDKQLLRVAKKILVSVEFEAIRQLDRKVKKYLDSVCVPFETGTRFLAVPLIEDVDRKLREFE
Ga0308309_102183114	3300028906	Soil	MAALAIPIEVQEQSLSQSTVILQVKFGLLGDSRKVSASQVEVDTDKQLLRVAKKILVSAEFEAIRQLDRKVKKYLDSVCVPFETGTRFLAVPLIEDVDRKLREFERERADLVDRFLDS
Ga0222749_104773022	3300029636	Soil	MAALAIPIEVQEQSLSQSTVILQVKFGLLGDSRKVSASQVEVDTDKQLLRVAKKILVSVEFEAIRQLDRKVKKYLDSVCVPFETGTRFLAVPLIEDVDRKLREFERERA
Ga0311341_105124041	3300029908	Bog	MAALAIPIARQEQSLSESTVILQVKFGLLGDSRKVSSSQVEVDTDKQLLRVAKKILVSNEFEAIKQIDRRVKKYLDSVCVPFETGTRFLAVPLIEDVDCKLREFERDRSELV
Ga0311361_104503411	3300029911	Bog	MAALAIPIAKPEQSLSESTVILQVKFGLLGDSRKVSNSQVEVDTDKQLLRVAKKILVSNEFEAIRQIDRKVKKYLDNICVPFETGTRFLAVPLIDDVDRKLHEFESERAELVDRL
Ga0311362_108255011	3300029913	Bog	MAALAIPIAKPEQSLSESTVILQVKFGLLGDSRKVSNSQVEVDTDKQLLRVAKKILVSNEFEAIRQIDRKVKKYLDNICVPFETGTRFLAV
Ga0311340_110089941	3300029943	Palsa	MAALAIPIARQEQSLSESTVILQVKFGLLGDSRKVSSSQVEVDTDKQLLRVAKKILVSNEFEAIKQIDRRVKKYLDSVCVPFETGTRFLAVPLIEDVDRKLREFDRDRSELVDRF
Ga0311352_114994532	3300029944	Palsa	MAALAIPIARQEQSLSESTVILQVKFGLLGDSRKVSSSQVEVDTDKQLLRVAKKILVSNEFEAIKQIDRRVKKYLDSVCVPFETGTRFLAVPLIEDVDC
Ga0311371_119047701	3300029951	Palsa	MAALAVPIEVQEQSLSQSTVILQVKFGLLGDSRKVSASQVEVDTDKQLLRVAKKILVSVEFEAIRQLDRKVKKYLDSVCVPFET
Ga0311339_111806612	3300029999	Palsa	MAALAIPIEVQEQSLSQSTVILQVKFGLLGDSRKVSASQVEVDTDKQLLRVAKKILVSAEFEAIRQLDRKVKKYLDSVCVPFETGTRFLAVPLIEDVDRKLREFERERADFVDRFLDSYPTLCESMSD
Ga0302181_102820362	3300030056	Palsa	MAALAIPIEVQEQSLSQSTVILQVKFGLLGDSRKVSASQVEVDTDKQLLRVAKKILVSAEFEAIRQLDRKVKKYLDSVCVPFETGTRFLAVPLIED
Ga0311370_119395952	3300030503	Palsa	MAALAIPIEVQEQSLSQSTVILQVKFGLLGDSRKVSASQVEVDTDKQLLRVAKKILVSVEFEAIRQLDRKVKKYLDSVCVPFETGMRFLAVPLIEDVDRKLREFERERADLV
Ga0311356_116300871	3300030617	Palsa	MAALAIPIARQEQSLSESTVILQVKFGLLGDSRKVSSSQVEVDTDKQLLRVAKKILVSNEFEAIKQIDRRVKKYLDSVCVPFETGTRFLAVPLIEDVDRKLREFDRDRSELVDRFLDSYPTLCESMSERLR
Ga0302310_105959871	3300030737	Palsa	MAALAIPIEVQEQSLSQSTVILQVKFGLLGDSRKVSASQVEVDTDKQLLRVAKKILVSVEFEAIRQLDRKVKKYLDSVCVPFETGTRFL
Ga0265746_10332801	3300030815	Soil	MAALAIPIARQEQSLSESTVILQVKFGLLGDSRKVSSSQVEVDTDKQLLRVAKKILVSNEFEAIKQIDRRVKKYLDSVCVPFETGTRFLAVPLIEDVDRKLREFDRDRSELVDRFL
Ga0265770_11320462	3300030878	Soil	MAALAIPIEVQEQSLSQSTVILQVKFGLLGDSRKVSASQVEVDTDKQLLRVAKKILVSVEFEAIRQLDRKVKKYLDSVCVPFETGTRFLAVPLIEDVDRKLREFERERADLVDRFLDSYPTLCESMSDRLRVL
Ga0073994_119814511	3300030991	Soil	MAALAIPIEVQEQSLSQSTVILQVKFGLLGDSRKVSASQVEVDTDKQLLRVAKKILVSVEFEAIRQLDRKVKKYLDSVCVPFETGTRFLAVPLIEDVDRKLREFERERVDLVDRFLDSYP
Ga0170822_101943401	3300031122	Forest Soil	MAALAIPIEVQEQSLSQSTVILQVKFGLLGDSRKVSASQVEVDTDKQLLRVAKKILVSVEFEAIRQLDRKVKKYLDSVCVPFETGTRFLAVPLIEDVDRKLREFERERADLVDRFLD
Ga0170822_108524752	3300031122	Forest Soil	MAALAIPIARQEQSLSESTVILQVKFGLLGDSRKVSSSQVEVDTDKQLLRVAKKILVSNEFEAIKQIDRRVKKYLDSVCVPFETGTSFLAVPLIEDVDCKLREFERDR
Ga0170824_1104234652	3300031231	Forest Soil	MAALAIPIEVQEQSLSQSTVILQVKFGLLGDSRKVSASQVEVDTDKQLLRVAKKILVSVEFEAIRQLDRKVKKYLDSVCVPFETGTRFLAVPLIEDVDRKLR
Ga0302325_110269342	3300031234	Palsa	MAALAIPIARQEQSLSESTVILQVKFGLLGDSRKVSSSQVEVDTDKQLLRVAKKILVSNEFEAIKQIDRRVKKYLDSVCVPFETGTRFLAVPLIEDVDCKLRE
Ga0302324_1004694511	3300031236	Palsa	MAALAIPIEVQEQSLSQSTVILQVKFGLLGDSRKVSASQVEVDTDKQLLRVAKKILVSVEFEAIRQLDRKVKKYLDSVCVPFETGTRFLAVPLIEDVDRKLREFERERADLVDRFLDSYP
Ga0302324_1032856071	3300031236	Palsa	MAALAIPIARQEQSLSESTVILQVKFGLLGDSRKVSSSQVEVDTDKQLLRVAKKILVSNEFEAIKQIDRRVKKYLDSVCVPFETGTRFLAVPLIED
Ga0302140_110951832	3300031261	Bog	MAALAIPIARQEQSLSESTVILQVKFGLLGDSRKVSSSQVEVDTDKQLLRVAKKILVSNEFEAIKQIDRRVKKYLDSVCVPFETG
Ga0302320_110417102	3300031524	Bog	MAALAIPIAKPEQSLSESTVILQVKFGLLGDSRKVSNSQVEVDTDKQLLRVAKKILVSNEFEAIRQIDRKVKKYLDNICVPFETGTRFLAVPLIDDVDWKLHEFESERAELVDRF
Ga0302320_117098052	3300031524	Bog	MAALAIPIEVQEQSLSQSTVILQVKFGLLGDSRKVSASQVEVDTDKQLLRVAKKILVSVEFEAIRQLDRKVKKYLDSVCVPFETGTRFLAVPLIEDVDRKLREFERERVDLVDRFLDSYPTLCESMSDRL
Ga0302326_127096252	3300031525	Palsa	MAALAIPIEVQEQSLSQSTVILQVKFGLLGDSRKVSASQVEVDTDKQLLRVAKKILVSVEFEAVRQLDRKVKKYLDSVCVPFETGTRFLAV
Ga0310686_1036323861	3300031708	Soil	MAALAIPIARQEQSLSESTVILQVKFGLLGDSRKVSSSQVEVDTDKQLLRVAKKILVSNEFEAIKQIDRRVKKYLDSVCVPFETGTRFLAVPLIEDVDCKLREFERD
Ga0310686_1088233231	3300031708	Soil	MAALAIPIEVQEQSLSQCTVILQVKFGLLGDSRKVSASQVEVDTDKQLLRVAKKILVSVEFEAIRQLDRKVKKYLDSVCVPFETGTRFLAVPLIED
Ga0307474_113306571	3300031718	Hardwood Forest Soil	MAALAIPIARQEQSLSESTVILQVKFGLLGDSRKVSSSQVEVDTDKQLLRVAKKILVSSEFEAIKQIDRRVKKYLDSVCVPFETGTRFLAVPLIEDVDCKLR
Ga0302319_103466851	3300031788	Bog	MAALVIPIAKQEQSLSESTVILQVKFGVLGDSRKVSSSQVEVDTDKQLLRVAKKILVSNEFEAIRQIDRRVKKYLEGVCVPFETGTRFLAVPLIEDVDRKLHEFEGERAELVDRFLDSYPTLCESM
Ga0311301_103531216	3300032160	Peatlands Soil	MAALAIPIEVQEQSLSQSTVILQVKFGLLGDSRKVSASQVEVDTDKQLLRVAKKILVSVEFEAIRQLDRKVKKYLDSVCVPFETG
Ga0335079_123175231	3300032783	Soil	MAALAIPIEVQEQSLSQSTVILQVKFGLLGDSRKVAASQVEVDTDKQLLRVAKKILVSAEFEAIRQLDRKVKKYLDSVCVPFETGTRFLAVPLIEDVDRNLREFERE
Ga0335078_112229882	3300032805	Soil	MAALAIPIAKQEQSLSESTVILQVKFGLLGDSRKVSSSQVEVDTDKQLLRVAKKILVSNEFEAIKQIDRRVKKYLDSVCVPFETGTRFLAVPLIEDV
Ga0335081_121129292	3300032892	Soil	MAALAIPSEVQEQSLSQSTVILQVKFGLLGDSRKVAASQVEVDTDKQLLRVAKKILVSVEFEAIRQLDRKVKKYLDSVCVPFETGTRFLAVPLIEDVDRNLREFERERGDLVDRFLDSYPRLCESMSDRLRVLH
Ga0335077_118100942	3300033158	Soil	MAALAIPIEVQEQSLSQSTVILQVKFGLLGDSRKVAASQVEVDTDKQLLRVAKKILVSAEFEAIRQLDRKVKKYLDSVCVPFETGTRFLAVPLIEDVDRNLREFERERGDLVDRF

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F101537

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign