Metagenome / Metatranscriptome Family F101518

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F101518
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	124 residues
Representative Sequence	MRRLLLVTSVLCAIDTTQAFAQHEVSQQLLELEEADRNTFFTMQLRGSNKRCDQVIRTLFNAAYLDVDEWEALCRDHNSYSLNVPADPDATITSLHCRELSTTSKMLLQSVGSKNKASGCRIKGERRKRH
Number of Associated Samples	99
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	64.00 %
% of genes near scaffold ends (potentially truncated)	37.25 %
% of genes from short scaffolds (< 2000 bps)	91.18 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (81.373 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (28.431 % of family members)
Environment Ontology (ENVO)	Unclassified (24.510 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (38.235 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 62.31% β-sheet: 0.77% Coil/Unstructured: 36.92%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF06411	HdeA	4.90
PF07647	SAM_2	0.98
PF01068	DNA_ligase_A_M	0.98
PF05362	Lon_C	0.98
PF13683	rve_3	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0466	ATP-dependent Lon protease, bacterial type	Posttranslational modification, protein turnover, chaperones [O]	0.98
COG1067	Predicted ATP-dependent protease	Posttranslational modification, protein turnover, chaperones [O]	0.98
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.98
COG1750	Predicted archaeal serine protease, S18 family	General function prediction only [R]	0.98
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.98
COG3480	Predicted secreted protein YlbL, contains PDZ domain	Signal transduction mechanisms [T]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	81.37 %
Unclassified	root	N/A	18.63 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	81.37 %
Unclassified	root	N/A	18.63 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	81.37 %
Unclassified	root	N/A	18.63 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	79.41 %
Unclassified	root	N/A	18.63 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	76.47 %
Unclassified	root	N/A	18.63 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	72.55 %
Unclassified	root	N/A	18.63 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.94 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	72.55 %
Unclassified	root	N/A	18.63 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.94 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	72.55 %
Unclassified	root	N/A	18.63 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.96 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	72.55 %
Unclassified	root	N/A	18.63 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.98 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	72.55 %
Unclassified	root	N/A	18.63 %
Bradyrhizobium sp. 6(2017)	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 6(2017)	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_100395821	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	606	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100399829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	535	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10008573	All Organisms → cellular organisms → Bacteria	2436	Open in IMG/M
3300001661\|JGI12053J15887_10280197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	820	Open in IMG/M
3300004081\|Ga0063454_101553414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	569	Open in IMG/M
3300004153\|Ga0063455_100149581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1070	Open in IMG/M
3300005164\|Ga0066815_10062766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	637	Open in IMG/M
3300005187\|Ga0066675_10913783	Not Available	663	Open in IMG/M
3300005343\|Ga0070687_101154274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	569	Open in IMG/M
3300005347\|Ga0070668_102263248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	502	Open in IMG/M
3300005363\|Ga0008090_10151544	Not Available	594	Open in IMG/M
3300005455\|Ga0070663_100612468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	917	Open in IMG/M
3300005713\|Ga0066905_100248190	All Organisms → cellular organisms → Bacteria	1366	Open in IMG/M
3300006038\|Ga0075365_10088420	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2108	Open in IMG/M
3300006046\|Ga0066652_100706603	Not Available	959	Open in IMG/M
3300006177\|Ga0075362_10546411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	595	Open in IMG/M
3300006800\|Ga0066660_11554583	Not Available	522	Open in IMG/M
3300006845\|Ga0075421_101187212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	852	Open in IMG/M
3300009098\|Ga0105245_10651536	Not Available	1083	Open in IMG/M
3300009101\|Ga0105247_10100543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1848	Open in IMG/M
3300010043\|Ga0126380_10106085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1700	Open in IMG/M
3300010048\|Ga0126373_11905434	Not Available	657	Open in IMG/M
3300010366\|Ga0126379_11013553	Not Available	935	Open in IMG/M
3300010375\|Ga0105239_10962911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	981	Open in IMG/M
3300010398\|Ga0126383_11588454	All Organisms → cellular organisms → Bacteria → Proteobacteria	743	Open in IMG/M
3300011000\|Ga0138513_100012509	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1083	Open in IMG/M
3300012198\|Ga0137364_11128624	Not Available	589	Open in IMG/M
3300012199\|Ga0137383_11010630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 6(2017)	605	Open in IMG/M
3300012200\|Ga0137382_10256540	All Organisms → cellular organisms → Bacteria → Proteobacteria	1212	Open in IMG/M
3300012207\|Ga0137381_11524887	Not Available	560	Open in IMG/M
3300012208\|Ga0137376_11662035	All Organisms → cellular organisms → Bacteria → Proteobacteria	530	Open in IMG/M
3300012211\|Ga0137377_10625478	Not Available	1013	Open in IMG/M
3300012212\|Ga0150985_104661071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2700	Open in IMG/M
3300012357\|Ga0137384_11080445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	644	Open in IMG/M
3300012469\|Ga0150984_102720356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	531	Open in IMG/M
3300012683\|Ga0137398_10707018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	701	Open in IMG/M
3300012685\|Ga0137397_11121120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	572	Open in IMG/M
3300012924\|Ga0137413_11759736	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	511	Open in IMG/M
3300012941\|Ga0162652_100106700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	506	Open in IMG/M
3300012948\|Ga0126375_11137489	Not Available	645	Open in IMG/M
3300012955\|Ga0164298_10207927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1149	Open in IMG/M
3300012957\|Ga0164303_10026312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2325	Open in IMG/M
3300012984\|Ga0164309_10198940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1377	Open in IMG/M
3300013297\|Ga0157378_11343532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	757	Open in IMG/M
3300015371\|Ga0132258_10814944	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2354	Open in IMG/M
3300015373\|Ga0132257_102306474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	697	Open in IMG/M
3300015374\|Ga0132255_101987529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	885	Open in IMG/M
3300016422\|Ga0182039_10504720	Not Available	1045	Open in IMG/M
3300017792\|Ga0163161_10798549	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	793	Open in IMG/M
3300018027\|Ga0184605_10264169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	782	Open in IMG/M
3300018028\|Ga0184608_10126596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1087	Open in IMG/M
3300018031\|Ga0184634_10381108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	646	Open in IMG/M
3300018054\|Ga0184621_10173850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	774	Open in IMG/M
3300018055\|Ga0184616_10148381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	865	Open in IMG/M
3300018061\|Ga0184619_10271424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	779	Open in IMG/M
3300018067\|Ga0184611_1008295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2862	Open in IMG/M
3300018072\|Ga0184635_10023485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2279	Open in IMG/M
3300018073\|Ga0184624_10335884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	677	Open in IMG/M
3300018076\|Ga0184609_10443750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	597	Open in IMG/M
3300018078\|Ga0184612_10431662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	658	Open in IMG/M
3300018081\|Ga0184625_10069647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1786	Open in IMG/M
3300018082\|Ga0184639_10274820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	888	Open in IMG/M
3300018083\|Ga0184628_10533141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	603	Open in IMG/M
3300018468\|Ga0066662_12766827	Not Available	520	Open in IMG/M
3300018482\|Ga0066669_10572243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	987	Open in IMG/M
3300021078\|Ga0210381_10386732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	515	Open in IMG/M
3300021082\|Ga0210380_10080071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1432	Open in IMG/M
3300021363\|Ga0193699_10165969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	911	Open in IMG/M
3300025961\|Ga0207712_11442492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	616	Open in IMG/M
3300027681\|Ga0208991_1104559	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	848	Open in IMG/M
3300028587\|Ga0247828_10450020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	754	Open in IMG/M
3300028713\|Ga0307303_10051335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	874	Open in IMG/M
3300028720\|Ga0307317_10122780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	867	Open in IMG/M
3300028754\|Ga0307297_10081332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1043	Open in IMG/M
3300028778\|Ga0307288_10145939	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	888	Open in IMG/M
3300028784\|Ga0307282_10139491	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1144	Open in IMG/M
3300028799\|Ga0307284_10211138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	765	Open in IMG/M
3300028803\|Ga0307281_10147164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	824	Open in IMG/M
3300028810\|Ga0307294_10082735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	990	Open in IMG/M
3300028811\|Ga0307292_10122535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1036	Open in IMG/M
3300028811\|Ga0307292_10280798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	695	Open in IMG/M
3300028876\|Ga0307286_10367741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	537	Open in IMG/M
3300028881\|Ga0307277_10524147	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	532	Open in IMG/M
3300028885\|Ga0307304_10125073	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1051	Open in IMG/M
3300030904\|Ga0308198_1066556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	585	Open in IMG/M
3300031058\|Ga0308189_10337440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	602	Open in IMG/M
3300031058\|Ga0308189_10391072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	572	Open in IMG/M
3300031093\|Ga0308197_10176116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	709	Open in IMG/M
3300031094\|Ga0308199_1044752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	847	Open in IMG/M
3300031098\|Ga0308191_1034907	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	546	Open in IMG/M
3300031184\|Ga0307499_10171788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	650	Open in IMG/M
3300031199\|Ga0307495_10110679	Not Available	664	Open in IMG/M
3300031226\|Ga0307497_10129302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1023	Open in IMG/M
3300031231\|Ga0170824_127144624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1181	Open in IMG/M
3300031424\|Ga0308179_1038570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	589	Open in IMG/M
3300031469\|Ga0170819_13069535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1191	Open in IMG/M
3300031945\|Ga0310913_10964436	Not Available	598	Open in IMG/M
3300031954\|Ga0306926_11126296	Not Available	926	Open in IMG/M
3300032059\|Ga0318533_10187021	Not Available	1479	Open in IMG/M
3300032174\|Ga0307470_10474798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	906	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.31%
Host-Associated	Host-Associated	15.69%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	68.63%
Aquatic	Environmental → Aquatic	15.69%
Plants	Host-Associated → Plants	15.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	66.67%
Sediment	Environmental → Aquatic → Sediment	13.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.82%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.90%
Freshwater	Environmental → Aquatic → Freshwater	1.96%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	1.96%
Roots	Host-Associated → Plants → Roots	1.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	13.73%
Loam	Environmental → Terrestrial → Soil → Loam	5.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.92%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.94%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.96%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	1.96%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	1.96%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	44.12%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	13.73%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.84%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.94%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.96%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.96%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	1.96%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	1.96%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.98%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	28.43%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	13.73%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.94%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.94%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.96%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	1.96%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	1.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.98%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.98%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.98%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.98%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.98%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.98%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006177	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2	Host-Associated	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011000	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012941	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018055	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_coex	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030904	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_202 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030988	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_157 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030990	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031094	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031098	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_186 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031424	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_150 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1003958211	3300000364	Soil	MRRLLLVTSVLCAIDTTQAFAQHXVSXQXLELEEADRNXFFTMXLXGSNKRCDQVIRTLFNAAYLDVDEWEALCRDHNSYSLNVPADPDATITSLHCRELSTTSKMLLQSVGSKNKASGCRIKGERRKRH*
INPhiseqgaiiFebDRAFT_1003998291	3300000364	Soil	MRRLLLVTSVLCAIDTTQAFAQHVVSQQLLELEEADRNIFFTMQLRGSNKRCDQVIRTLFNAAYLDVDEWEALCRDHNSYSLNVPADPDATITSLHCRELSTTSKMLLQSVGSKNKASGCRIKGERRKRH*
AF_2010_repII_A001DRAFT_100085736	3300000793	Forest Soil	SEQLLEMDEADRNTFFTMVLRASNKRCDQVIRTMLSDAFLGFDEWEALCKDHNSYSLKVAADPDATITSLHCRELSKTSKMLLKSVGSESKARSCRINKEWRKRD*
JGI12053J15887_102801972	3300001661	Forest Soil	MVNAGPQGVQATPRWISGGCGCAGTRCRLQCQSPRRSDAMRRLLLVTTLLCAADTAQVFAQHEVSQQLLELEEADRNTFFTMLLRGNNKRCDQVIRTLFNAAFLDMDEWEALCRDHNSYSLNVPADPDATITSLHCRELSTTSKMLLQSVGSNSKASGCRIKKERRKRY*
Ga0063454_1015534141	3300004081	Soil	MRRLLLVTSVLCAIDTTQAFAQHEVSQQLLELEEADRNIFFTMLLHGSNKRCDQVIRTLFNAAYLDVDEWEVLCRDHNSYSLNVPADPDATITSLHCRELSTTSKMLL
Ga0063455_1001495812	3300004153	Soil	MRRLLLVTSVLCAIDTTQAFAQHEVSQQLLELEEADRNIFFTMLLHGSNKRCDQVIRTLFNAAYLDVDEWEALCRDHNSYSLNVPADPDATITSLHCRELSTTSKMLLQSVGSRNKAIGCRIKGERRKRH*
Ga0066815_100627662	3300005164	Soil	AMRRLLLVTSVLCAIDTTQAFAQHEVSQQLLELEEADRNIFFTMLLHGSNKRCDQVIRTLFNAAYLDVDEWEALCRDHNSYSLNVPADPDATITSLHCRELSTTSKMLLQSVGNKNKASGCRIKGERRKRH*
Ga0066675_109137832	3300005187	Soil	MRRLLLAMTLLCAFDTAQAFAQHERSQQLLEMDEADRNTFFTMVLRASNKRCDRVIRTMFNDAFLGFDEWETLCKDHNSYSLKVAADPDATITSLHCRELSKTSKMLLQSVGSESKASGCRIKKERRKRD*
Ga0070687_1011542741	3300005343	Switchgrass Rhizosphere	AMRRLLLVTSVLCAIDTTQAFAQHEVSQQLLELEEADRNIFFTMLLHGSNKRCDQVIRTLFNAAYLDVDEWEALCRDHNSYSLNVPADPDATITSLHCRELSTTSKMLLQSVVSKNKASGCRIKGERRKRH*
Ga0070668_1022632481	3300005347	Switchgrass Rhizosphere	MRRLLLVTSVLCAIDTTQAFAQHEVSQQLLELEEADRNIFFTMLLHGSNKRCDQVIRTLFNAAYLDVDEWEALCRDHNSYSLNVPADPDATITSLHCRELSTTSKMLLQSVGSKNKASGCRIKGERRKRH*
Ga0008090_101515442	3300005363	Tropical Rainforest Soil	LPISEQLLEMDEADRNTFFTMVLRASNKRCDQVIRTMFSDSFLGFDEWEALCKDHNSYSLKVAADPDATITSLHCHELSKTSKMLLQSVGSKSKASSCRINKEWRKRD*
Ga0070663_1006124681	3300005455	Corn Rhizosphere	MRRLLLVTSVLCAIDTTQAFAQHEVSQQLLELEEADRNIFFTMLLHGSNKRCDQVIRTLFNAAYLDVDEWEALCRDHNSYSLNVPADPDATITSLHCRELSTTSKMLLQSVGSRNKASGCRIKGELRKRH*
Ga0066905_1002481902	3300005713	Tropical Forest Soil	MRRLLLATTLLCAFDTAQAFAQHEVSQQLLELDEADRNTFFTLLLSGSNKPCDRVIRTMFNDAFLGMDQWEALCKDHNQYLLHVPADPDATITSLHCRELSKTSKMLLQSVGSTSTASGCRIKMERRKRH*
Ga0075365_100884204	3300006038	Populus Endosphere	VRLHGVRSERKKGAMTRVLLFTTLLCAVGTTQASAQNEVSQQLLELDENDRNTFFTLLLRGSNRQCDQVIRTLLKNAYLGMDEWEALCRDRNSYSFSIPADPEATITSLNCRELLATSKMMLQSVGSKSKARGCKIKRKRRERD*
Ga0066652_1007066032	3300006046	Soil	MRCSLLATALLCATAQAFAQHERSQQLLEMEEADRNTFFTMVLRASNRQCDRVIRTMFSDAFLGFDEWEALCNDHNSYSLKVAADPEAAITSLHCRDLSKTSKMLLQSVGSESKASGCRINKERRRRD*
Ga0075362_105464111	3300006177	Populus Endosphere	MRRLLLVTSVLCAIDTAQAFAQHEVSQQLLELEEADRNTFFTMLLRGSNKRCDQVIRTLFNAGYVDVDEWEALCRDHNSYSFNVPADPDATITSLHCRELSTTSKMLLQSVGSKNKASGCRIKVERRKRH*
Ga0066660_115545831	3300006800	Soil	MRRLLLATTLLCTFDTAQAFAQHERSEELLEMDEADRNTFFTMVLRANNKQCDQVIRTIFGDAFLGFDEWEALCKDRNSYSLKVAADPDATITSLHCRELSKTSKMLLQSVGSESKVSGCRIIKTERRKRD*
Ga0075421_1011872122	3300006845	Populus Rhizosphere	LLFTTLLCAVGTTQASAQNEVSQQLLELDEDDRNTFFTLLLRGSNRQCDQVIRTLLKNAYLGMDEWEALCRDRNSYSFSIPADPEATITSLNCRELLATSKMMLQSVGSKSKARGCKIKRKRRERD*
Ga0105245_106515361	3300009098	Miscanthus Rhizosphere	MRRLLLVTSVLCAIDTTQAFAQHEVSQQLLELEEADRNTFFTMQLRGSNKRCDQVIRTLFNAAYLDVDEWAALCRNHNSYSLNVPSDPDATITSLHCREPSTTSKMLLQSVGSRNKAIGCRIKGERRKRH*
Ga0105247_101005431	3300009101	Switchgrass Rhizosphere	VLCAIDTTQAFAQHEVSQQLLELEEADRNIFFTMLLHGSNKRCDQVIRTLFNAAYLDVDEWEALCRDHNSYLLNVPADPDATITSLHCRELSTTSKMLLQSVGSRNKAIGCRIKGERRKRH*
Ga0126380_101060852	3300010043	Tropical Forest Soil	MRRLLLATTLLCTFDTAQAFAQHERSEELLEMDEADRNTFFTMVLRASNKQCDQVIRTMFSDAFLGFDEWEALCKDHNSYSLKVGADPDATITSLHCRELSKTSKMLLQSVGSESKASGCRIEKERRKRD*
Ga0126373_119054341	3300010048	Tropical Forest Soil	GPPQLPINEQLLEMDEADRNTFFTMALRASNKRCDQVIRTMLSGAFLGFDEWEALCKDHNSYSLKVAADPDATITSLHCRELSKISKMLLQSVGSESKASSCRINKEW*
Ga0126379_110135531	3300010366	Tropical Forest Soil	EGGQSVPSPPGPPQLPINEQLLEMDEADRNTFFTMVLRASNKRCDQVIRTMLSDAFLGFDEWEALCKDHNSYSFKVAADPDATITSLHCRELSKISKMLLQSVGSESKASSCRINKE*
Ga0105239_109629111	3300010375	Corn Rhizosphere	MRRLLLVTSVLCAIDTTQAFAQHEVSQQLLELEEADRNIFFTMLLHGSNKRCDQVIRTLFNAAYLDVDEWEALCRDNNSYSLNVPADPDATITSLHCRELSTTSKMLLQSVGSRNKASGCRIKGERRKRH*
Ga0126383_115884542	3300010398	Tropical Forest Soil	EQLLEMDEADRNTFFTMVLRASNKRCDQVIRTMLSDAFLGFDEWEALCKDHNSYSLKVAADPDATITSLHCRELSKISKMLLQSVGSESKASSCRINKEW*
Ga0138513_1000125092	3300011000	Soil	VLCAIDTTQAFAQHEVSQQLLELEEADRNTFFTMQLRGSNKRCDQVIRTLFNAAYLDVDEWEALCRDHNSYSLNVPADPDATITSLHCRELSTTSKMLLQSVGSKNKASGCRIKGERRKRH*
Ga0137364_111286241	3300012198	Vadose Zone Soil	MRRLLLATTLLCTFDTAQAFAQHERSQQLLEMDEADRNTFFTMVLRASNKRCDRVIRTMFNDAFLGFDEWEALCKDRNSYSLKVGADPDATITSLHCRELSKTSKMLLQSVGSESKASGCRIKNERRKRD*
Ga0137383_110106301	3300012199	Vadose Zone Soil	CLLLATTLLCTFDTAQAFAQHERSQQLLEMDEADRNTFFTMVLRASNKQCDQVIRTMFSDAFLGFDEWEALCKAHNSYSLKVAADPDATITSLHCRELSKTSKMLLQSVGSESKASGCRIKKERRKRD*
Ga0137382_102565402	3300012200	Vadose Zone Soil	MRRLLLATTLLCAFDTTQAFAQHERSQQLLEMDEADRNTFFTMVLRASNKRCDRVIRTMFNDAFLGFDEWEALCKDRNSYSLKVAADPDATITSLHCRELSKTSKMLLQSVGSESKASGCRIKNERRKRD*
Ga0137381_115248871	3300012207	Vadose Zone Soil	MRRLLLATTLLCAFDTTQAFAQHERSLQLLEMDEADRNTFFTMVLRASNKRCDRVIRTMFNDAFLGFDEWEALCKDHNSYSLKVAADPDATITSLHCRELSKTSKMLLQSVGSESKVSGCRIIKTERRKRD*
Ga0137376_116620351	3300012208	Vadose Zone Soil	AFAQHERSQQLLEMDEADRNTFFTMVLRASNKRCDRVIRTMFNDAFLGFDEWEALCKDHNSYSLKVAADPDATITSLHCRELSKTSKMLLQSVGSESKVSGCRIIKTERRKRD*
Ga0137377_106254781	3300012211	Vadose Zone Soil	MRRLLLATTLLCAFDTTQAFAQHERSQQLLEMDEADRNTFFTMVLRASNKRCDRVIRTMFNDAFLGFDEWEALCKDHNSYSLKVAADPDATITSLHCRELSKTSKMLLQSVGSESKASGCRIKNERRKRD*
Ga0150985_1046610711	3300012212	Avena Fatua Rhizosphere	VLCAIDTTQAFAQHEVSQQLLELEEADRNIFFTMLLHGSNKRCDQVIRTLFNAAYLDVDEWEALCRDHNSYSLNVPADPDATITSLHCRELSTTSKMLLQSVGSRNKAIGCRIKGERRKRH*
Ga0137384_110804452	3300012357	Vadose Zone Soil	MRRLLLATTLLCAFDAAQAFAQHERSQQLLEMDEADRNTFFTMVLRASNKRCDRVIRTMFNDAFLGFDEWETLCKDHNSYSLKVAADPDATITSLHCRELSKTSKMLLQSVGSESKAGGCRIKKGRRKRD*
Ga0150984_1027203561	3300012469	Avena Fatua Rhizosphere	MRRLLLVTSVLCAIDTTQAFAQHVVSQQLLELEEADRNIFFTMQLRGSNKRCDQVIRTLFNAAYLDVDEWEALCRDHNSYSLNVPADPDATITSLHCRELSTTSKMLLQSVGSKNKASGCRIKGE
Ga0137398_107070181	3300012683	Vadose Zone Soil	MRRLLLVTSVLCAIDTTQAFAQHEVSQQLLELEEADRNTFFTMQLRGSNKRCDQVIRTLFNAAYLDVDEWEALCRDHNSYSLNVPADPDATITSLHCRELSTTSKMLLQSVGSKNKASGCKIKGERRKRH*
Ga0137397_111211201	3300012685	Vadose Zone Soil	VLCAIDTTQAFAQHEVSQQLLELEEADRNTFFTMLLRGSNKRCDQVIRTLFNAAYLDVDEWEALCRDHNSYSLNVPADPDATITSLHCRELSTTSKMLLQSVGSKNKASGCRIKGERRKRH*
Ga0137413_117597361	3300012924	Vadose Zone Soil	LCAIDTTQAFAQHEASQQLLELEEADRNTFFTMQLRGSNKRCDQVIRTLFNAAYLDVDEWEALCRDHNSYSLNVPADPDATITSLHCRELSTTSKMLLQSVGSKNKASGCRIKGERRKRH
Ga0162652_1001067001	3300012941	Soil	VLCAIDTTQAFAQHEVSQQLLELEEADRNTFFTMQLRGSNKRCDQVIRTLFNAAYLDVDEWEALCRDHNSYSLTVPADPDATITSLHCRELSTTSKMLLQSVGSKNKASGCKIKGERRKRH*
Ga0126375_111374891	3300012948	Tropical Forest Soil	MRRLLLATTLLCTFDTAQAFAQHERSEELLEMDEADRNTFFTMVLRASNKQCDQVIRTMFSDAFLGFDEWEALCKDHNSYSLKVAADPDATITSLHCRELSKTSKMLLQSVGSESKASGCRIEKERRKRD*
Ga0164298_102079272	3300012955	Soil	VLCAIDTTQAFAQHEVSQQLLELEEADRNIFFTMLLHGSNKRCDQVIRTLFNAAYLDVDEWEALCRDHNSYSLNVPADPDATITSLHCRELSTTSKMLLQSVGSKNKASGCRIKGERRKRH*
Ga0164303_100263123	3300012957	Soil	MRRLLLVTSVLCAIDTTQAFAQHEVSQQLLELEESDRNIFFTMLLHGSNKRCDQVIRTLFNAAYLDVDEWEALCRDHNSYSLNVPADPDATITSLHCRELSTTSKMLLQSVGSRNKASGCRIKGERRKRH*
Ga0164309_101989402	3300012984	Soil	MRRLLLVTSVLCAIDTTQAFAQHEVSQQLLELEEADRNIFFTMQLRGSNKRCDQVIRTLFNAAYLDVDEWEALCRDHNSYSLNVPADPDATITSLHCRELSTTSKMLLQSVGSRNKASGCRIKGERRKRH*
Ga0157378_113435321	3300013297	Miscanthus Rhizosphere	SVLCAIDTTQAFAQHEVSQQLLELEEADRNIFFTMLLHGSNKRCDQVIRTLFNAAYLDVDEWEALCRDHNSYSLNVPADPDATITSLHCRELSTTSKMLLQSVGSRNKASGCRIKGERRKRH*
Ga0132258_108149444	3300015371	Arabidopsis Rhizosphere	VLCAIDTTQAFAQHEVSQQLLELEEADRNTFFTMQLRGSNKRCDQVIRTLFNAAYLDVDEWEALCRDHNSYSLNVPADPDATITSLHCRELSTTSKMLLQSVGSKNKASGCRIKGERRKR
Ga0132257_1023064741	3300015373	Arabidopsis Rhizosphere	MRRLLLVTSVLCAIDTTQAFAQHVVSQQLLELEEADRNIFFTMQLRGSNKRCDQVIRTLFNAAYLDVDEWEALCRDHNSYSLNVPADPDATITSLHCRELSTTSKMLLQSVGSKNK
Ga0132255_1019875291	3300015374	Arabidopsis Rhizosphere	MRRLLLVTSVLCAIDTTQAFAQHEVSQQLLELEEADRNTFFTMQLRGSNKRCDQVIRTLFNAAYLDVDEWEALCRDHNSYSLNVPADPDATITSLHCRELSTTSKMLLQSVGSKNKASGCRIKGERRKRH*
Ga0182039_105047201	3300016422	Soil	EGGQSVPSPPGPPQLPINEQLLEMDEADRNTFFTMALRASNKRCDQVIRTMLSGAFLGFDEWEALCKDHNSYSLKVAADPDATITSLHCRELSKISKMLLQSVGSESKASSCRINKEWRKRD
Ga0163161_107985491	3300017792	Switchgrass Rhizosphere	MRRLLLVTSVLCAIDTTQAFAQHEVSQQLLELEEADRNIFFTMQLRGSNKRCDQVIRTLFNAAYLDVDEWEALCRDHNSYSLNVPADPDATITSLHCRELSTTSKMLLQSVGSRNKASGCRIKGERRKRH
Ga0184605_102641691	3300018027	Groundwater Sediment	MRRLLLVTSVLCAIDTTQAFAQHEVSQQLLELEEADRNTFFTMQLRGSNKRCDQVIRTLFNAAYLDVDEWEALCRDHNSYSLNVPADPEATITSLHCRELSTTSKMLLQSVGSKNKASGCRIKGERRKRH
Ga0184608_101265962	3300018028	Groundwater Sediment	MRRLLLVTSVLCAIDTTQAFAQHEVSQQLLELEEADRNTFFTMQLRGSNKRCDQVIRTLFNAAYLDVDEWEALCRDHNSYSLNVPADPDATITSLHCRELSTTSKMLLQSVGSKNKASGCKIKGERRKRH
Ga0184634_103811082	3300018031	Groundwater Sediment	LLELEEADRNTFFTMLLRGSNKRCDQVIRTLFNAAYLDVDEWEALCRDHNSYSLNVPADPDATITSLHCRELSTTSKMLLQSVGSKNKASGCRIKGERRKRH
Ga0184621_101738502	3300018054	Groundwater Sediment	MRRLLLVTSVLCAIDTTQAFAQHEVSQQLLELEEADRNTFFTMQLRGSNKRCGQVIRTLFNAGYVEVDEWEALCRDHNSYSLNVPADPDATITSLHCRELSTTSKMLLQSVGSKNKASGCRIKGERRKRH
Ga0184616_101483812	3300018055	Groundwater Sediment	MRRLLLVTSVLCAIDTTQAFAQHEVSQQLLELEQADRNTFFTMQLRGSNKRCDQVIRTLFNAAYLDVDEWEALCRDHNSYSLSVPADPDATITSLHCRELATTSKMLLQSVGSKNKASGCKIKGERRKRH
Ga0184619_102714241	3300018061	Groundwater Sediment	MRRLLLVTSVLCAIDTTQAFAQHEVSQQLLELEEADRNTFFTMQLRGSNKRCDQVIRTLFNAAYLDVDEWEALCRDHNSYSLNVPADPEATITSLHCRELSTTSKMLLQSVGSKNKASGCKIKGERRKRH
Ga0184611_10082954	3300018067	Groundwater Sediment	MRRLLLVTSVLCAIDTTQAFAQHEVSQQLLELEEADRNIFFTMQLRGSNKRCDQVIRTLFNAAYLDVDEWEALCRDHNSYSLNVPADPDATITSLHCRELSTTSKMLLQSVGSKNKASGCRIKGERRKRH
Ga0184635_100234851	3300018072	Groundwater Sediment	MRRLLLVTSVLCAIDTTQVFAQHVVSQQLLELEEADRNIFFTMQLRGSNKRCDQVIRTLFNAAYLDVDEWEALCRDHNSYSLNVPADPDATITSLHCRELSTTSEVVSVV
Ga0184624_103358841	3300018073	Groundwater Sediment	MRRLLLVTSVLCAIDTTQAFAQHVVSQQLLELEEADRNIFFTMQLRGSNKRCDQVIRTLFNAAYLDVDEWEALCRDHNSYSLNVPADPDATITSLHCRELSTTSKMLLQSVGSKNKASGCRIKGERRKRH
Ga0184609_104437501	3300018076	Groundwater Sediment	MRRLLLVTSVLCAIDTTQVFAQHVVSQQLLELEEADRNIFFTMQLRGSNKRCDQVIRTLFNAGYLDVDEWEALCRDHNSYSLNVPADPDATITSLHCRELSTTSKMLL
Ga0184612_104316621	3300018078	Groundwater Sediment	MRRLLLVTSVLCAIDTTQAFAQHEVSQQLLELEEADRNTFFTMQLRGSNKRCDQVIRTLFNAAYLDVDEWEALCRDHNSYSLNVPADPDATITSLHCRELSTTSKMLLQSVGSKNKASGCRIKGERRKRH
Ga0184625_100696473	3300018081	Groundwater Sediment	MRRLLLVTSVLCAIDTTQAFAQHVVSQQLLELEEADRNIFFTMLLHGSNKRCDQVIRTLFNAAYLDVDEWEALCRDHNSYSLNVPADPDATITSLHCRELSTTSKMLLQSVGSRNKASGCRIKGERRKRH
Ga0184639_102748202	3300018082	Groundwater Sediment	MRRLLLVTSVLCAIDTTQAFAQHEVSQQLLELEEADRNIFFTMQLRGSNKRCDQVIRTLFNAAYLDVDEWEALCRDHNSYSLTVPADPDATITSLHCRELSTTSKMLLQSVGSKNKASGCRIKGERRKRH
Ga0184628_105331411	3300018083	Groundwater Sediment	MRRLLLVTSVLCAIDTTQAFAQHEVSQQLLELEEADRNTFFTMQLRGSNKRCDQVIRTLFNAAYLDVDEWEALCRDHNSYSLNVPADPDATITSLHCRELSTTSKMLLQSVGSKNK
Ga0066662_127668271	3300018468	Grasslands Soil	SVPSRPEPPQLPNERSKQLLEMDEADRNTFFTMVLRASNKQCDQVIRTIFGDAFLGFDEWEALCKDHNSYSLKVAADPDATITSLHCRELSKTSKMLLQSVGSESKASGCRIEKERRKRD
Ga0066669_105722431	3300018482	Grasslands Soil	MTRLLLAMTLLCAFDTAQAFAQHERSQQLLEMDEADRNTFFTMVLRASNKRCDRVIRTMFNDAFLGFDEWETLCKDHNSYSLKVAADPDATITSLHCRELSKTSKMLLQSVGSESKASGCRIKNERRKRD
Ga0210381_103867321	3300021078	Groundwater Sediment	MRRLLLVTSVLCAIDTTQAFAQHEVSQQLLELEEADRNTFFTMQLRGSNKRCDQVIRTLFNAAYLDVDEWEALCRDHNSYSLNVPADPDATITSLHCRELSTTSQDA
Ga0210380_100800712	3300021082	Groundwater Sediment	MRRLLLVTSVLCAIDTTQVFAQHVVSQQLLELEEADRNIFFTMQLRGSNKRCDQVIRTLFNAAYLDVDEWEALCRDHNSYSLSVPADPDATITSLHCRELSTTSKMLLQSVGSKNKASGCRIKGERRKRH
Ga0193699_101659692	3300021363	Soil	MRRLLLVTTLLCAADTAQVFAQHEVSQQLLELEEADRNTFFTMLLRGNNKRCDQVIRTLFNAAFLDMDEWEALCRDHNSYSLNVPADPDATITSLHCRELSTTSKMLLQSVGSNSKASGCRIKKERRKRY
Ga0207712_114424921	3300025961	Switchgrass Rhizosphere	MRRLLLVTSVLCAIDTTQAFAQHEVSQQILELEEADRNIFFTMLLHGSNKRCDQVIRTLFNAAYLDVDEWEALCRDHNSYSLNVPADPDATITSLHCRELSTTSKMLLQSVGSRNKAIGCRIKGERRKRH
Ga0208991_11045592	3300027681	Forest Soil	MRRLLLVTSVLCAIDTTQAFAQHEVSQQLLELEEADRNTFFTMQLRGSNKRCDQVIRTLFNAGYLDIDEWEALCRDHNSYSLNVPADPEATITSLHCRELSRTSKMLLQSVGSNNKASGCRIKGERRKRH
Ga0247828_104500201	3300028587	Soil	MRRLLLVTSVLCAIDTTQAFAQHEVSQQLLELEEADRNIFFTMQLRGSNKRCDQVIRTLFNAAYLDVDEWEALCRDHNSYSLNVPADPDATITSLHCRELSTTSKKLLQSVGSKNKASGCRIKGERRKRH
Ga0307303_100513351	3300028713	Soil	MRRLLLVTSVLCAIDTTQAFAQHEVSQQLLELEEADRNTFFTMQLRGSNKRCDQVIRTLFNAAYLDVDEWEALCRDHNSYSLNVPADPDATITSLHCRELSTTSKMLLQSVGSKNKASGCRIKVEQRKRH
Ga0307317_101227801	3300028720	Soil	MRRLLLVTSVLCAIDTTQAFAQHEVSQQLLELEEADRNTFFTMLLRGSNKRCDQVIRTLFNAAYLDVDEWEALCRDHNSYSLNVPADPDATITSLHCRELSTTSKMLLQSVGSKNKASGCRIKGERRKRH
Ga0307297_100813321	3300028754	Soil	MRRLLLVTSVLCAIDTTQAFAQHEVSQQLLELEEADRNTFFTMQLRGSNKRCDQVIRTLFNAGYLDVDEWEALCRDHNSYSLNVPADPEATITSLHCRELSRTSKMLLQSVGSKNKASGCKIKGERRKRH
Ga0307288_101459392	3300028778	Soil	LVTSVLCAIDTTQAFAQHEVSQQLLELEEADRNTFFTMQLRGSNKRCDQVIRTLFNAAYLDVDEWEALCRDHNSYSLNVPADPDATITSLHCRELSTTSKMLLQSVGSKNKASGCKIKGERRKRH
Ga0307282_101394911	3300028784	Soil	MRRLLLVTSVLCAIDTTQAFAQHEVSQQLLELEEADRNTFFTMLLRGSNKRCDQVIRTLFNAAYLDVDEWEALCRDHNSYSLNVPADPDATITSLHCRELSTTSKMLLQSVGSKNKASGCKIKGERRKRH
Ga0307284_102111381	3300028799	Soil	MRRLLLVTSVLCAIDTTQAFAQHEVSQQLLELEEADRNTFFTMLLRGSNKRCDQVIRTLFNAAYLDVDEWEALCRDHNSYSLNVPADPEATITSLHCRELSRTSKMLLQSVGSNNKASGCRIKGERRKRH
Ga0307281_101471641	3300028803	Soil	MRRLLLVTRVLCAIDTTQVFAQHVVSQQLLELEEADRNIFFTMQLRGSNKRCDQVIRTLFNAAYLDVDEWEALCRDHNSYSLSVPADPDATITSLHCRELSTTSKMLLQSVGSKNKASGCRIKGERRKRH
Ga0307294_100827351	3300028810	Soil	MRRLLLVTSVLCAIDTTQAFAQHEVSQQLLELEEADRNTFFTMQLRGSNKRCDQVIRTLFNAAYLDVDEWEALCRDHNSYSLNVPADPDATITSLHCRELSTTSKMLLQSVGSKNKASGCKIKGERRKRHTSISGASAAVRLPSGVAAG
Ga0307292_101225352	3300028811	Soil	QLLELEEADRNTFFTMQLRGSNKRCDQVIRTLFNAAYLDVDEWEALCRDHNSYSLNVPADPDATITSLHCRELSTTSKMLLQSVGSKNKASGCKIKGERRKRH
Ga0307292_102807981	3300028811	Soil	MRRLLLVTSVLCAIDTTQAFAQHEVSQQLLELEEADRNTFFTMQLRGSNKRCDQVIRTLFNAGYLDIDEWEALCRDHNSYSLNVPADPEATITSLHCRELSRTSKMLLQS
Ga0307286_103677411	3300028876	Soil	QHEVSQQLLELEEADRNTFFTMQLRGSNKRCDQVIRTLFNAAYLDVDEWEALCRDHNSYSLNVPADPDATITSLHCRELSTTSKMLLQSVGSKNKASGCRIKGERRKRH
Ga0307277_105241471	3300028881	Soil	MRRLLLVTSVLCAIDTTQAFAQHEVSQQLLELEEADRNTFFTMQLRGSNKRCDQVIRTLFNAGYLDVDEWEALCRDHNSYSLNVPADPDATITSLHCRELSTTSKMLLQSVGSKNKASGCKIKGERRKRHTSISG
Ga0307304_101250732	3300028885	Soil	QHEVSQQLLELEEADRNTFFTMQLRGSNKRCDQVIRTLFNAAYLDVDEWEALCRDHNSYSLNVPADPDATITSLHCRELSTTSKMLLQSVGSKNKASGCKIKGERRKRH
Ga0308198_10665561	3300030904	Soil	TQAFAQHEVSQQLLELEEADRNTFFTMQLRGSNKRCDQVIRTLFNAAYLDVDEWEALCRDHNSYSLNVPADPDATITSLHCRELSTTSKMLLQSVGSKNKASGCKIKGERRKRH
Ga0308183_11928381	3300030988	Soil	LELEEADRNTFFTMQLRGSNKRCDQVIRTLFNAAYLDVDEWEALCRDHNSYSLNVPADPDATITSLHCRELSTTSKMLLQSVGSKNKASGCRIKGERRKRH
Ga0308178_10912502	3300030990	Soil	ELEEADRNTFFTMQLRGSNKRCDQVIRTLFNAAYLDVDEWEALCRDHNSYSLNVPADPDATITSLHCRELSTTSKMLLQSVGSKNKASGCRIKGERRKRH
Ga0308189_103374401	3300031058	Soil	IDTTQAFAQHEVSQQLLELEEADRNTFFTMQLRGSNKRCDQVIRTLFNAGYVEVDEWEALCRDDNSYSLTVPADPDATITSLHCRELSTTSKMLLQSVGSKNKASGCRIKVEQRKRH
Ga0308189_103910721	3300031058	Soil	KTVQTTGATSIDTTQAFAQHEVSQQLLELEEADRNTFFTMQLRGSNKRCDQVIRTLFNAAYLDVDEWEALCRDHNSYSLNVPADPDATITSLHCRELSTTSKMLLQSVGSKNKASGCKIKGERRKRH
Ga0308197_101761162	3300031093	Soil	MRRLLLVTSVLCAIDTTQAFAQHEVSQQLLELEEADRNTFFTMQLRGSNKRCDQVIRTLFNAGYVEVDEWEALCRDDNSYSLTVPADPDATITSLHCRELSTTSKMLLQSVGSKNKASGCRIKVEQRKRH
Ga0308199_10447521	3300031094	Soil	MRRLLLVTSVLCAIDATQAFAQHEVSQQLLELEEADRNTFFTMQLRGSNKRCDQVIRTLFNAGYLDVDEWEALCRDHNSYSLNVPADPDATITSLHCRELSTTSKMLLQSVGSKNKASGCRIRGKRRKRH
Ga0308191_10349072	3300031098	Soil	MRRLLLVTSVLCAIDTTQAFAQHEVSQQLLELEEADRNTFFTMLLRGSNKRCDQVIRTLFNAAHLDVDEWEALCRDHNSYSLNVPADPDATITSLHCRELSTTSKMLLQSVGSKNKASGCRIKVEQRKRH
Ga0307499_101717881	3300031184	Soil	MRRLLLVTSVLCAIDTTQAFAQHEVSQQLLELEEADRNIFFTMLLHGSNKRCDQVIRTLFNAAYLDVDEWEALCRDHNSYSLNVPADPDATITSLHCRELSTTSKMLLQSVGSRNKAIGCRIKGERRKRH
Ga0307495_101106791	3300031199	Soil	MRRLLLVTSVLCAIDTTQAFAQHEVSQQLLELEEADRNTFFTMQLRGSNKRCDQVIRTLFNAAYLDVDEWEALCGDHNSYSLNVPADPDATITSLHCRELSTTSKMLLQSVGSKNKASGCRIKGERRKRH
Ga0307497_101293021	3300031226	Soil	MRRLLLVTSVLCAIDTTQAFAQHEVSQQLLELEEADRNIFFTMLLHGSNKRCDQVIRTLFNAAYLDVDEWEALCRDHNSYSLNVPADPDATITSLHCRELSTTSKMLLQSVGSKNKASGCRIKGERRKRH
Ga0170824_1271446241	3300031231	Forest Soil	MRRLLLVTSVLCAIDTTQVFAQHVVSQQLLELEEADRNIFFTMQLRGSNKRCDQVIRTLFNAAYLDVDEWEALCRDHNSYSLNVPADPDATITSLHCRELSTTSKMLLQSVGSKNKASGCRIKGERRKRH
Ga0308179_10385701	3300031424	Soil	QHEVSQQLLELEEADRNTFFTMQLRGSNKRCDQVIRTLFNAGYLDVDEWEALCRDHNSYSLNVPADPEATITSLHCRELSRTSKMLLQSVGSKNKASGCKIKGERRKRH
Ga0170819_130695352	3300031469	Forest Soil	MRRLLLVTSVLCAIDTTQAFAQHAVSQQLLELEEADRNIFFTMLLQGSNKRCDQVIRTLFNAGYVDIDEWEALCRDHNSYSLTVPADLDATITSLHCRELSTTSKMLLQSVGSKNKASGCRIKGERRKRH
Ga0310913_109644361	3300031945	Soil	EQLLEMDEADRNTFFTMALRASNKRCDQVIRTMLSGAFLGFDEWEALCKDHNSYSLKVAADPDATITSLHCRELSKISKMLLQSVGSESKASSCRINKEWRKRD
Ga0306926_111262963	3300031954	Soil	PGPPQLPIHEQLLEMDEADRNTVFTMALRASNKRCDQVIRTMLSGAFLGFDEWEALCKDHNSYSLKVAADPDATITSLHCRELSKISKMLLQSVGSESKASSCRINKEWRKRD
Ga0318533_101870213	3300032059	Soil	ARPEGGQSVPSPPGPPQLPINEQLLEMDEADRNTFFTMALRASNKRCDQVIRTMLSGAFLGFDEWEALCKDHNSYSLKVAADPDATITSLHCRELSKISKMLLQSVGSESKASSCRINKEWRKRD
Ga0307470_104747981	3300032174	Hardwood Forest Soil	MRRLLLVTSVLCAIDTTQAFAQHEVSQQLLELEEADRNIFFTMQLRGSNKRCDQVIRTLFNAAYLDVDEWEALCRDHNSYSLNVPADPNATITSLHCRELSTTSKMLLQSVGSKNKASGCRIKGERRKRH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F101518

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences