Metagenome / Metatranscriptome Family F101508

Basic Information
Family ID	F101508
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	72 residues
Representative Sequence	AMNKRDTEECLKRAKECARQADAAVEPELKIYLMKLALSWTQAAGETVERELRASSGRPDVTKSASRPLPQ
Number of Associated Samples	89
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	18.81 %
% of genes near scaffold ends (potentially truncated)	53.92 %
% of genes from short scaffolds (< 2000 bps)	89.22 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (83.333 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (29.412 % of family members)
Environment Ontology (ENVO)	Unclassified (34.314 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (50.980 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 66.20% β-sheet: 0.00% Coil/Unstructured: 33.80%
Feature Viewer

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Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF13561	adh_short_C2	50.00
PF07366	SnoaL	18.63
PF00106	adh_short	8.82
PF02771	Acyl-CoA_dh_N	1.96
PF13545	HTH_Crp_2	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	1.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	87.25 %
Unclassified	root	N/A	12.75 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	87.25 %
Unclassified	root	N/A	12.75 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	83.33 %
Unclassified	root	N/A	12.75 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	3.92 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	27.45 %
Unclassified	root	N/A	12.75 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	2.94 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.75 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7.84 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	2.94 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.98 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.75 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.86 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	2.94 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	0.98 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.75 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.86 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	2.94 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.98 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.75 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.86 %
Protostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia	2.94 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	0.98 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.75 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.86 %
Ecdysozoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa	2.94 %
Burkholderia perseverans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia perseverans	0.98 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.75 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.86 %
Nematoda	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda	2.94 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	0.98 %
Burkholderia perseverans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia perseverans	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.75 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.86 %
Chromadorea	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea	2.94 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	0.98 %
Burkholderia perseverans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia perseverans	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.75 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.86 %
Rhabditida	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida	2.94 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	0.98 %
Burkholderia perseverans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia perseverans	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.75 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.86 %
Rhabditina	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Rhabditina	2.94 %
eudicotyledons	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons	0.98 %
Burkholderia perseverans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia perseverans	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.75 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.86 %
Rhabditomorpha	infraorder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Rhabditina → Rhabditomorpha	2.94 %
Gunneridae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae	0.98 %
Burkholderia perseverans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia perseverans	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.75 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.86 %
Rhabditoidea	superfamily	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Rhabditina → Rhabditomorpha → Rhabditoidea	2.94 %
Pentapetalae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae	0.98 %
Burkholderia perseverans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia perseverans	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.75 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.86 %
Rhabditidae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Rhabditina → Rhabditomorpha → Rhabditoidea → Rhabditidae	2.94 %
asterids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids	0.98 %
Burkholderia perseverans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia perseverans	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.75 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.86 %
Rhabditidae incertae sedis	no rank	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Rhabditina → Rhabditomorpha → Rhabditoidea → Rhabditidae → Rhabditidae incertae sedis	2.94 %
campanulids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids	0.98 %
Burkholderia perseverans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia perseverans	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.75 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.86 %
Diploscapter	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Rhabditina → Rhabditomorpha → Rhabditoidea → Rhabditidae → Rhabditidae incertae sedis → Diploscapter	2.94 %
Asterales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales	0.98 %
Burkholderia perseverans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia perseverans	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.75 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.86 %
Diploscapter pachys	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Rhabditina → Rhabditomorpha → Rhabditoidea → Rhabditidae → Rhabditidae incertae sedis → Diploscapter → Diploscapter pachys	2.94 %
Asteraceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae	0.98 %
Burkholderia perseverans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia perseverans	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.75 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.86 %
Diploscapter pachys	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Rhabditina → Rhabditomorpha → Rhabditoidea → Rhabditidae → Rhabditidae incertae sedis → Diploscapter → Diploscapter pachys	2.94 %
Asteroideae	subfamily	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae	0.98 %
Burkholderia perseverans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia perseverans	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.75 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.86 %
Diploscapter pachys	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Rhabditina → Rhabditomorpha → Rhabditoidea → Rhabditidae → Rhabditidae incertae sedis → Diploscapter → Diploscapter pachys	2.94 %
Anthemideae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae	0.98 %
Burkholderia perseverans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia perseverans	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.75 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.86 %
Diploscapter pachys	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Rhabditina → Rhabditomorpha → Rhabditoidea → Rhabditidae → Rhabditidae incertae sedis → Diploscapter → Diploscapter pachys	2.94 %
Anthemidinae	subtribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae	0.98 %
Burkholderia perseverans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia perseverans	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.75 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.86 %
Diploscapter pachys	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Rhabditina → Rhabditomorpha → Rhabditoidea → Rhabditidae → Rhabditidae incertae sedis → Diploscapter → Diploscapter pachys	2.94 %
Tanacetum	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae → Tanacetum	0.98 %
Burkholderia perseverans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia perseverans	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.75 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.86 %
Diploscapter pachys	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Rhabditina → Rhabditomorpha → Rhabditoidea → Rhabditidae → Rhabditidae incertae sedis → Diploscapter → Diploscapter pachys	2.94 %
Tanacetum cinerariifolium	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae → Tanacetum → Tanacetum cinerariifolium	0.98 %
Burkholderia perseverans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia perseverans	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig1214256	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
2170459002\|FZY7DQ102GQHYU	Not Available	514	Open in IMG/M
3300002075\|JGI24738J21930_10064651	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300002568\|C688J35102_119572505	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300003162\|Ga0006778J45830_1050228	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300003308\|Ga0006777J48905_1067758	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300003569\|Ga0007420J51693_1069732	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300003571\|Ga0007419J51692_1034397	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300004114\|Ga0062593_100337257	All Organisms → cellular organisms → Bacteria → Proteobacteria	1309	Open in IMG/M
3300004463\|Ga0063356_105618779	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300004479\|Ga0062595_101223385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia perseverans	669	Open in IMG/M
3300004798\|Ga0058859_11495716	Not Available	572	Open in IMG/M
3300005093\|Ga0062594_102449111	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300005329\|Ga0070683_101005391	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300005330\|Ga0070690_101164659	Not Available	614	Open in IMG/M
3300005339\|Ga0070660_100685905	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300005356\|Ga0070674_100109050	All Organisms → cellular organisms → Bacteria → Proteobacteria	2029	Open in IMG/M
3300005365\|Ga0070688_100151314	All Organisms → cellular organisms → Bacteria → Proteobacteria	1586	Open in IMG/M
3300005367\|Ga0070667_100763690	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
3300005441\|Ga0070700_100390444	All Organisms → cellular organisms → Bacteria → Proteobacteria	1043	Open in IMG/M
3300005456\|Ga0070678_101304167	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300005539\|Ga0068853_100814397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	895	Open in IMG/M
3300005618\|Ga0068864_102365109	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300005719\|Ga0068861_100094192	All Organisms → cellular organisms → Bacteria	2369	Open in IMG/M
3300005719\|Ga0068861_101514648	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300005719\|Ga0068861_102031495	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300005840\|Ga0068870_10966103	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300006028\|Ga0070717_11560081	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300006038\|Ga0075365_10052117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2705	Open in IMG/M
3300006042\|Ga0075368_10080049	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Rhabditina → Rhabditomorpha → Rhabditoidea → Rhabditidae → Rhabditidae incertae sedis → Diploscapter → Diploscapter pachys	1329	Open in IMG/M
3300006042\|Ga0075368_10180494	All Organisms → cellular organisms → Bacteria → Proteobacteria	890	Open in IMG/M
3300006178\|Ga0075367_10734843	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300006237\|Ga0097621_101288315	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300006573\|Ga0074055_10009062	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Rhabditina → Rhabditomorpha → Rhabditoidea → Rhabditidae → Rhabditidae incertae sedis → Diploscapter → Diploscapter pachys	1320	Open in IMG/M
3300006581\|Ga0074048_13244574	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300006604\|Ga0074060_10021924	All Organisms → cellular organisms → Bacteria → Proteobacteria	2756	Open in IMG/M
3300006953\|Ga0074063_10000723	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300009156\|Ga0111538_10819040	All Organisms → cellular organisms → Bacteria	1179	Open in IMG/M
3300009176\|Ga0105242_10424413	All Organisms → cellular organisms → Bacteria	1247	Open in IMG/M
3300010373\|Ga0134128_10159404	All Organisms → cellular organisms → Bacteria → Proteobacteria	2550	Open in IMG/M
3300010400\|Ga0134122_13376182	Not Available	502	Open in IMG/M
3300011119\|Ga0105246_11635494	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300012212\|Ga0150985_107987327	Not Available	565	Open in IMG/M
3300012212\|Ga0150985_112763348	Not Available	605	Open in IMG/M
3300012212\|Ga0150985_121087924	Not Available	518	Open in IMG/M
3300012469\|Ga0150984_107301181	Not Available	551	Open in IMG/M
3300012469\|Ga0150984_121496813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1068	Open in IMG/M
3300012957\|Ga0164303_10617404	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300012960\|Ga0164301_10257197	All Organisms → cellular organisms → Bacteria	1150	Open in IMG/M
3300012960\|Ga0164301_11059654	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300012988\|Ga0164306_10839090	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300017792\|Ga0163161_10610890	All Organisms → cellular organisms → Bacteria	900	Open in IMG/M
3300018067\|Ga0184611_1011693	All Organisms → cellular organisms → Bacteria → Proteobacteria	2522	Open in IMG/M
3300018073\|Ga0184624_10004460	All Organisms → cellular organisms → Bacteria → Proteobacteria	4415	Open in IMG/M
3300018074\|Ga0184640_10248589	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300018465\|Ga0190269_10635486	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300018469\|Ga0190270_11727864	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300019356\|Ga0173481_10037508	All Organisms → cellular organisms → Bacteria	1597	Open in IMG/M
3300022756\|Ga0222622_10295262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1113	Open in IMG/M
3300025321\|Ga0207656_10138062	All Organisms → cellular organisms → Bacteria → Proteobacteria	1147	Open in IMG/M
3300025711\|Ga0207696_1153715	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300025893\|Ga0207682_10114674	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Rhabditina → Rhabditomorpha → Rhabditoidea → Rhabditidae → Rhabditidae incertae sedis → Diploscapter → Diploscapter pachys	1189	Open in IMG/M
3300025901\|Ga0207688_10179967	All Organisms → cellular organisms → Bacteria	1261	Open in IMG/M
3300025908\|Ga0207643_10441974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	827	Open in IMG/M
3300025919\|Ga0207657_10790002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	734	Open in IMG/M
3300025937\|Ga0207669_10366448	All Organisms → cellular organisms → Bacteria → Proteobacteria	1118	Open in IMG/M
3300025972\|Ga0207668_10950317	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300026023\|Ga0207677_10022904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3848	Open in IMG/M
3300026041\|Ga0207639_10590128	All Organisms → cellular organisms → Bacteria	1023	Open in IMG/M
3300026075\|Ga0207708_10065926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2768	Open in IMG/M
3300026118\|Ga0207675_100792139	Not Available	961	Open in IMG/M
3300026142\|Ga0207698_10985728	All Organisms → cellular organisms → Bacteria	853	Open in IMG/M
3300028589\|Ga0247818_11218109	Not Available	538	Open in IMG/M
3300028712\|Ga0307285_10057088	All Organisms → cellular organisms → Bacteria	981	Open in IMG/M
3300028719\|Ga0307301_10090431	All Organisms → cellular organisms → Bacteria → Proteobacteria	966	Open in IMG/M
3300028784\|Ga0307282_10205080	All Organisms → cellular organisms → Bacteria → Proteobacteria	943	Open in IMG/M
3300028790\|Ga0307283_10063131	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300028810\|Ga0307294_10420468	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300028824\|Ga0307310_10246826	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300028876\|Ga0307286_10014516	All Organisms → cellular organisms → Bacteria	2477	Open in IMG/M
3300030785\|Ga0102757_11432971	All Organisms → cellular organisms → Bacteria → Proteobacteria	898	Open in IMG/M
3300030829\|Ga0308203_1009885	All Organisms → cellular organisms → Bacteria → Proteobacteria	1084	Open in IMG/M
3300030830\|Ga0308205_1011778	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae → Tanacetum → Tanacetum cinerariifolium	906	Open in IMG/M
3300030830\|Ga0308205_1045648	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300030902\|Ga0308202_1034644	All Organisms → cellular organisms → Bacteria → Proteobacteria	868	Open in IMG/M
3300030902\|Ga0308202_1086566	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300030903\|Ga0308206_1061349	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300030903\|Ga0308206_1134660	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300030905\|Ga0308200_1084384	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300030993\|Ga0308190_1061969	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300031058\|Ga0308189_10326646	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300031091\|Ga0308201_10040752	All Organisms → cellular organisms → Bacteria → Proteobacteria	1114	Open in IMG/M
3300031091\|Ga0308201_10095790	All Organisms → cellular organisms → Bacteria → Proteobacteria	847	Open in IMG/M
3300031091\|Ga0308201_10436744	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300031092\|Ga0308204_10276753	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300031093\|Ga0308197_10360931	Not Available	556	Open in IMG/M
3300031184\|Ga0307499_10280942	Not Available	542	Open in IMG/M
3300031847\|Ga0310907_10216045	All Organisms → cellular organisms → Bacteria	925	Open in IMG/M
3300031908\|Ga0310900_10941508	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300032075\|Ga0310890_10987142	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300034147\|Ga0364925_0128694	All Organisms → cellular organisms → Bacteria → Proteobacteria	911	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	56.86%
Host-Associated	Host-Associated	43.14%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	52.94%
Plants	Host-Associated → Plants	42.16%
Aquatic	Environmental → Aquatic	3.92%
Human	Host-Associated → Human	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	51.96%
Rhizoplane	Host-Associated → Plants → Rhizoplane	22.55%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.71%
Roots	Host-Associated → Plants → Roots	4.90%
Sediment	Environmental → Aquatic → Sediment	3.92%
Floodplain	Environmental → Terrestrial → Floodplain	0.98%
Digestive System	Host-Associated → Human → Digestive System	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	45.10%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	15.69%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.78%
Loam	Environmental → Terrestrial → Soil → Loam	6.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.92%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	3.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.92%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.98%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.98%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.98%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.29%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	15.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.92%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.92%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	3.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.92%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.94%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.98%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.98%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.98%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.98%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	29.41%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	5.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.92%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	3.92%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	3.92%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.94%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.96%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.96%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.98%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.98%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.98%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.98%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.98%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.98%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.98%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
2170459002	Grass soil microbial communities from Rothamsted Park, UK - March 2009 direct MP BIO 1O1 lysis 0-21 cm	Environmental	Open in IMG/M
3300002075	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4	Host-Associated	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003162	Avena fatua rhizosphere microbial communities - H4_Rhizo_Litter_21 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003308	Avena fatua rhizosphere microbial communities - H4_Rhizo_Litter_20 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003569	Grassland soil microbial communities from Hopland, California, USA - Sample H2_Bulk_36 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003571	Grassland soil microbial communities from Hopland, California, USA - Sample H2_Bulk_35 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004798	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006042	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3	Host-Associated	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025711	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028790	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_122	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300030785	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 5C (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030829	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_357 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030830	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_368 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030902	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030905	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030993	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M

Geographical Distribution

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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F101508

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_02566690	2124908045	Soil	MGAAMNKRDTEECLKRAKECARQAEAALDPELKIYLMKLALSWTQAAGETVERELRASSGRPTVTKSASRPLPQ
E1_00404820	2170459002	Grass Soil	MNKRDTEECLKRAKECARQADAAVEPELKIYLMKLALSWTQAAGETVERELRASSGRPP
JGI24738J21930_100646511	3300002075	Corn Rhizosphere	MNKRDTEECLKRAKECARQADAAVEPELKIYLMKLALSWTQAAGETVERELRASSGRPPVTKSAVRP
C688J35102_1195725052	3300002568	Soil	PTSVPGHPKGAAMNKRDTEECLKRAKECARQADAAVEPELKIYLMQLALSWTQAAGETVERELRASSGRPPVTKSAVRPLPQ*
Ga0006778J45830_10502281	3300003162	Avena Fatua Rhizosphere	GHPKGAAMNKRDTEECLKRAKECARQADAAVEPELKIYLMKLALSWTQAAGETVERELRASSGRPPVTKSAVRPLPQ*
Ga0006777J48905_10677581	3300003308	Avena Fatua Rhizosphere	NKRDTEECLKRAKECARQADAAVEPELKIYLMKLALSWTQAAGETVERELRASSGRPPVTKSAVRPLPQ*
Ga0007420J51693_10697321	3300003569	Avena Fatua Rhizosphere	PMGAAMNKRDTEECLKRAKECARQADAAVEPELKIYLMKLALSWTQAAGETVERELRASSGRPPVTKSAVRPLPQ*
Ga0007419J51692_10343971	3300003571	Avena Fatua Rhizosphere	HPKGAAMNKRDTEECLKRAKECARQADAAVEPELKIYLMKLALSWTQAAGETVERELRASSGRPDVTKSAVRPLPQ*
Ga0062593_1003372571	3300004114	Soil	MGAAMNKRDTEECLKRAKECARQADAAVDPELKIYLMKLALSWTQVAGETVERALRPSSGRPVVTGSGVRPSPQ*
Ga0063356_1056187792	3300004463	Arabidopsis Thaliana Rhizosphere	TEECLKRAKECARQADAAVDPELKVYLMKLGLSWTQAAGETVERKLRVSTGRPDVTKSVSRPLPQ*
Ga0062595_1012233851	3300004479	Soil	MGAAMNKRDTEECLKRAKECARQAEAALDPELKIYLMKLALSWTQAAGETVERELRASSGRPTVTKSASRPLPQ*
Ga0058859_114957162	3300004798	Host-Associated	VPGHPKGAAMNKRDTEECLKRAKECARQADAAVEPELKIYLMKLALSWTQAAGETVERELRASSGRPPVTKSAVRPLPQ*
Ga0062594_1024491111	3300005093	Soil	MNKRDTEECLKRANECARQADAAVEPELKIYLMKLALSWTQAAGETVERELRASSGRPDVTKSASRPLPQ*
Ga0070683_1010053911	3300005329	Corn Rhizosphere	MGAAMNKRDTEECLKRAKECARQADAAVEPELKIYLMKLALSWTQAAGETVERELRASSGRPPVTKSAVRPLPQ*
Ga0070690_1011646591	3300005330	Switchgrass Rhizosphere	MGAAMNKRDTEECLKRAKECARQADAAIDPELKIYLMKLALSWTQAAGETVERELRTSSGRPTVTKSASRPLPQ*
Ga0070660_1006859052	3300005339	Corn Rhizosphere	MNKRDTEECLKRAKECARQADAAVEPELKIYLMQLALSWTQAAGETVERELRASSGRPPV
Ga0070674_1001090502	3300005356	Miscanthus Rhizosphere	LIVYYVSPRPPTGAAMNKRDTEECLKRANECARQADAAVEPELKIYLMKLALSWTQAAGETVERELRASSGRPDVTKSASRPLPQ*
Ga0070688_1001513142	3300005365	Switchgrass Rhizosphere	MGAAMNKRDTEECLKRAKECARQADAAVEPELKIYLMKLALSWTQAAGETVERELRASSGRPPVTKSASRPLPQ*
Ga0070667_1007636901	3300005367	Switchgrass Rhizosphere	MNKRDTEECLKRAKECARQADAAVEPELKIYLMKLALSWTQAAGETVERELRASSGRPPVTKSAVRPLPQ*
Ga0070700_1003904442	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	SVPGHPKGAAMNKRDTEECLKRAKECARQADAAVEPELKIYLMKLALSWTQAAGETVERELRASSGRPPVTKSAVRPLPQ*
Ga0070678_1013041672	3300005456	Miscanthus Rhizosphere	MNKRDTEECLKRAKECARQADAAVDPELKIYLMKLALSWTQAAGETVERELRTSAGRPAITRSGVRPLPQ*
Ga0068853_1008143972	3300005539	Corn Rhizosphere	MNKRDTEECLKRAKECARQADAAVEPELKIYLMKLALSWTQAAGETVERELRTSAGRPAITGSGVRPLPQ*
Ga0068864_1023651091	3300005618	Switchgrass Rhizosphere	PTGAAMNKRDTEECLKRAKECARQADAAVDPELKIYLMKLALSWTQAAGETVERELRRSSGRSTVTRSASRPLPQ*
Ga0068861_1000941924	3300005719	Switchgrass Rhizosphere	MNKRDTEECLKRAKECARQADAAVEPELKIYLMKLALSWTQAAGETVERELRASSGRPDVTKSASRPLPQ*
Ga0068861_1015146481	3300005719	Switchgrass Rhizosphere	RDTEECLKRAKECARQADAAVEPELKIYLMKLALSWTQAAGETVERELRASSGRPPVTKSAVRPLPQ*
Ga0068861_1020314952	3300005719	Switchgrass Rhizosphere	MNKRDTEECLKRAKECARQADAAVDPELKIYLMKLALSWTQVAGETVERALRPSSGRPVVTGSGVRPSPQ*
Ga0068870_109661032	3300005840	Miscanthus Rhizosphere	MNKRDTEECLKRAKECARQADAAVEPELKIYLMKLALSWTQAAGETVERELRRSSGRSTVTRSASRPLPQ*
Ga0070717_115600812	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MNKRDTEECLKRAKECARQADAAVDPELKIYLMKLALSWTQAGGETVERELRRSSGRSTVTRS
Ga0075365_100521172	3300006038	Populus Endosphere	MNKRDTEECLKRAKECARQAEAAQDPELKIYLMKLALSWTQAAGETVERELRASSGRPTVTKSASRPLPQ*
Ga0075368_100800493	3300006042	Populus Endosphere	GAAMNKRDTEECLKRAKECARQAEAAQDPELKIYLMKLALSWTQAAGETVERELRASSGRPTVTKSASRPLPQ*
Ga0075368_101804942	3300006042	Populus Endosphere	TEECLKRAKECVRQAEAAHDPELKIYLMKLALSWTQAAGETVERELRTPSSRPAVTGSAVRPSPQ*
Ga0075367_107348432	3300006178	Populus Endosphere	MGAAMNKRDTEECLKRAKECARQAEAAHDPELKIYLMKLALSWTQAAGETVERELRTPSSRPAVTGSAVRPSPQ*
Ga0097621_1012883151	3300006237	Miscanthus Rhizosphere	RRRSGYPSLQPSMGAAMNKRDTEECLKRAKECARQADAAVDPELKIYLMKLALSWTQVAGETVERALRPSSGRPVVTGSGVRPSPQ*
Ga0074055_100090621	3300006573	Soil	VSPRPPTGAAMNKRDTEECLKRANECARQADAAVEPELKIYLMKLALSWTQAAGETVERELRASSGRPDVTKSASRPLPQ*
Ga0074048_132445742	3300006581	Soil	LKRAKECARQADAAVEPELKIYLMKLALSWTQAAGETVERELRASSGRPPVTKSAVRPLPQ*
Ga0074060_100219242	3300006604	Soil	MNKRDTEECLKRAKECARQADAAVEPELKIYLMQLALSWTQAAGETVERELRASSGRPPVTKSAVRPLPQ*
Ga0074063_100007232	3300006953	Soil	GAAMNKRDTEECLKRAKECARQADAAVDPELEIYLMKLALSWTQAAGETVERELRTSSGRPAITGSGVRPLPQ*
Ga0111538_108190402	3300009156	Populus Rhizosphere	MGAAMNKRDTEECLKRAKEGARQADAAVEPGLKIYLMKLALSWTQAAGETVERELRASSGRPDVTKSASRPLPQ*
Ga0105242_104244132	3300009176	Miscanthus Rhizosphere	MNKRDTEECLKRAKECARQADAAVDPELKIYLMKLALSWTQAAGETVERELRRSSGRSTVTRSASRPLPQ*
Ga0134128_101594041	3300010373	Terrestrial Soil	MNKRDTEECLKRAKECARQADAAIDPELKIYLMKLALSWTQAAGETVERELRTSSGRPTVTKSASRPLPQ*
Ga0134122_133761821	3300010400	Terrestrial Soil	MNKRDTEECLKRAKECARQAEAALDPELKIYLMKLALSWTQAAGETVERELRASSGRPT
Ga0105246_116354941	3300011119	Miscanthus Rhizosphere	MNKRDTEECLKRAKECARQAEAALDPELKIYLMKLALSWTQAAGETVERELRGSSGRATVKKL
Ga0150985_1013673131	3300012212	Avena Fatua Rhizosphere	TGAAMNKRDTEECLKRAKECARQADAAVEPELKIYLMKLALSWTQAAGETVERELRASAG
Ga0150985_1079873271	3300012212	Avena Fatua Rhizosphere	MGAAMNKRDTEECLKRAKECARQADAAIDPELTIYLMKLALSWTQAAGETVERELRASSGRPTVTKSASRPLPQ*
Ga0150985_1127633481	3300012212	Avena Fatua Rhizosphere	MGAAMNTRATEECLKRAKECARQADAAVETELKIYLMKLALSWTQAAGETVERELRASSGRPAVTKSAVRPLPQ*
Ga0150985_1210879241	3300012212	Avena Fatua Rhizosphere	PGHPMGAAMNKSDTEECLKRAKECARQADAAVEPELKIYLMKLALSWTQAAGETVERELRASSDGPTVTTSASPPLSQ*
Ga0150984_1073011811	3300012469	Avena Fatua Rhizosphere	MNKRATEECLKRAQECARQADAAVEPELKIYLMKLALSWTQAAGETVERELRASSDGPTVTTSASPPLSQ*
Ga0150984_1214968132	3300012469	Avena Fatua Rhizosphere	MNKRDTEECLKRANECARQADAAIDPELKIYLMKLALSWTQAAGETVERELRTSAGRPAITRSGVRPLPQ*
Ga0164303_106174042	3300012957	Soil	MGAAMNKSDTEECLKRAKECARQADAAVDPELKIYLMKLALSWTQAAGETVERELRTSAGRPAIT
Ga0164301_102571972	3300012960	Soil	MGAAMNKSDTEECLKRAKECARQADAAVDPELKIYLMKLALSWTQAAGETVERELRTSAGRPAITGSGVCNSGARN
Ga0164301_110596542	3300012960	Soil	MGAAMNKRDTEECLKRAKECARQADAAVDPELKIYLMKLALSWTQVAGETVERALRPSSGRPVV
Ga0164306_108390902	3300012988	Soil	MNKRDTEECLKRAKECARQADAAVDPELEIYLMKLALSWTQAAGETVERELRTSAGRPAITGSGVRPLPQ*
Ga0163161_106108902	3300017792	Switchgrass Rhizosphere	MNKRDTEECLKRAKECARQAEAAQDPELKIYLMKLALSWTQAAGETVERELRASSGRPTVTKSASRPLPQ
Ga0184611_10116933	3300018067	Groundwater Sediment	MNKRDTEECLKRANECARQADAELKIYLMKLALSWTQAAGETVERELRASSGRPDVTKSASRPLPQ
Ga0184624_100044602	3300018073	Groundwater Sediment	MNKRDTEECLKRANECARQADAAVEPELKIYLMKLALSWTQAAGETVERELRASSGRPDVTKSASRPLPQ
Ga0184640_102485892	3300018074	Groundwater Sediment	MNKRETEVCLKRAKECARQADAALDPELKIYLMKLALSWTQAAGETVERELRASSGRPAITKSASLPLPQ
Ga0190269_106354862	3300018465	Soil	MNKRDTEECLKRAKECARQADAAVEPELKIYLMKLGLSWTQAAGETVERELRDSSGRPDVTKSASRPLPQ
Ga0190270_117278641	3300018469	Soil	MNKRDTEECLKRANECARQADAAIDPELKIYLMKLALSWTQAAGETVERELRASSGRSAVTKSASRPLPQ
Ga0173481_100375083	3300019356	Soil	MNKRDTEECLKRAKECARQADAAVEPELKIYLMKLALSWTQAAGETVERELRASSGRPPVTKSAVRPLPQ
Ga0222622_102952622	3300022756	Groundwater Sediment	MNKRETEECLKRAKECARQADAALDPELKIYLMKLALSWTQAAGETVERELRASSGRPAITKSASLPLPQ
Ga0207656_101380622	3300025321	Corn Rhizosphere	MNKRDTEECLKRAKECARQADAAVEPELKIYLMKLALSWTQAAGETVEREVRASSGRPPVTKSASRPLPQ
Ga0207696_11537151	3300025711	Switchgrass Rhizosphere	MNKRDTEECLKRAKECARQADAAVEPELKIYLMKLALSWTQAAGETVERELRASSGRPPVTKSAV
Ga0207682_101146742	3300025893	Miscanthus Rhizosphere	AAMNKRDTEECLKRANECARQADAAVEPELKIYLMKLALSWTQAAGETVERELRASSGRPDVTKSASRPLPQ
Ga0207688_101799672	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MGAAMNKRDTEECLKRANECARQADAAVEPELKIYLMKLALSWTQAAGETVERELRASSVRPDVTKSASRPLPQ
Ga0207643_104419742	3300025908	Miscanthus Rhizosphere	MGAAMNKRDTEECLKRAKECARQADAAVDPELKIYLMKLALSWTQAAGETVERELRRSSGRSTVTRSASRPLPQ
Ga0207657_107900022	3300025919	Corn Rhizosphere	MGAAMNKRDTEECLKRAKECARQADAAVDPELKIYLMKLALSWTQVAGETVERALRPSSGRPVVTGSGVRPSPQ
Ga0207669_103664482	3300025937	Miscanthus Rhizosphere	LIVYYVSPRPPTGAAMNKRDTEECLKRANECARQADAAVEPELKIYLMKLALSWTQAAGETVERELRASSGRPDVTKSASRPLPQ
Ga0207668_109503172	3300025972	Switchgrass Rhizosphere	PSMGAAMNKRDTEECLKRAKECARQADAAVDPELKIYLMKLALSWTQAAGETVERELRASSGRPPVTKSAVRPLPQ
Ga0207677_100229045	3300026023	Miscanthus Rhizosphere	MGAAMNKRDTEECLKRAKECARQADAAVEPELKIYLMKLALSWTQAAGETVERELRASSGRPPVTKSAVRPLPQ
Ga0207639_105901282	3300026041	Corn Rhizosphere	MNKRDTEECLKRAKECARQADAAVEPELKIYLMKLALSWTQAAGETVERELRASSGRPPVTKSASRPLPQ
Ga0207708_100659262	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MNKRDTEECLKRANECARQADAAVEPELKIYLMKLALSWTQAAGETVERELRASSVRPDVTKSASRPLPQ
Ga0207675_1007921391	3300026118	Switchgrass Rhizosphere	AMNKRDTEECLKRAKECARQADAAVEPELKIYLMKLALSWTQAAGETVERELRASSGRPDVTKSASRPLPQ
Ga0207698_109857282	3300026142	Corn Rhizosphere	RSGYPSLQPSMGAAMNKGDTEECLKRAKECARQADAAVDPELKIYLMRLALSWTQVAGETVERALRPSSGRPVVTGSGVRPSPQ
Ga0247818_112181091	3300028589	Soil	MNKRDTEECLKRAKECARQVDAAVDPELKVYLMKLALSWTQAAGETVERELRTSAGRSAVTKSASRPLPQ
Ga0307285_100570882	3300028712	Soil	MNKRDTEECLKRANECARQADAAVEPELKIYLMKLALSWTQAAGETVERELRASSGRPDVTKSASRP
Ga0307301_100904312	3300028719	Soil	LKRAKECARQADAALDPELKIYLMKLALSWTQAAGETVERELRASSGRPAITKSASLPLP
Ga0307282_102050802	3300028784	Soil	MGAAMNKRDTAECLKRAKECARQADAAIDPKLKIYLMKLALSWTQAAGETVERELRAPSGRPTVTKSASRPLPQ
Ga0307283_100631312	3300028790	Soil	MNKRETEECLKRAKECARQADAALDPELKIYLMKLALSWTQAAGETVERELRASSGRPAITKSASLP
Ga0307294_104204682	3300028810	Soil	EECLKRAKECARQADAALDPELKIYLMKLALSWTQAAGETVERELRASSGRPAITKSASLPLPQ
Ga0307310_102468261	3300028824	Soil	MGAAMNKRDTEECLKRAKECARQVDAAVDPELKVYLMKLALLWTQAAGETVERELRASSGRPAITKSASLPLPQ
Ga0307286_100145162	3300028876	Soil	LIVYYVSPRPPTGAAMNKRDTEECLKRANECARQADSAVEPELKIYLMKLALSWTQAAGETVERELRASSGRPDVTKSASRPLPQ
Ga0102757_114329712	3300030785	Soil	AAMNKRDTEECLKRAKECARQVDAAVDPELKVYLMKLALLWTQAAGETVERELRAPSGRPTVTKSASRPLPQ
Ga0308203_10098851	3300030829	Soil	TGAAMNKRDTKECLKRAKECARQADAAVDLKIYLMKLALSWTQAAGETVERELRRSSGRSPVTRSASRPLPQ
Ga0308205_10117781	3300030830	Soil	PMGAAMNKRDTEECLKRAKECARQVDAAVDPELKVYLMKLALLWTQAAGETVERELRAPSGRPTVTKSASRPLPQ
Ga0308205_10456482	3300030830	Soil	RPPTGAAMNKRDTEECLKRANECARQADAAVEPELKIYLMKLALSWTQAAGETVERELRASSGRPDVTKSASRPLPQ
Ga0308202_10346442	3300030902	Soil	PPTGAAMNKRDTEECLKRANECARQADAAVEPELKIYLMQLALSWTQAAGETVERELRASSGRPPVTKSAVRPLPQ
Ga0308202_10865662	3300030902	Soil	TGAAMNKRETEECLKRAKECARQADAALDPELKIYLMKLALSWTQAAGETVERELRASSGRPAITKSASLPLPQ
Ga0308206_10613492	3300030903	Soil	HPMGAAMNKRDTEECLKRAKECARQVDAAVDPELKVYLMKLALLWTQAAGETVERELRAPSGRPTVTKSASRPLPQ
Ga0308206_11346601	3300030903	Soil	RPPTGAAMNKRDTEECLKRAKECARQADAAVEPELKIYLMKLALSWTQAAGETVERELRASAG
Ga0308200_10843843	3300030905	Soil	PTGAAMNKRDTEECLKRAKECARQADAAVEPELKIYLMKLGLSWTQAAGETVERELRDSSGRPDVTKSASRPLPQ
Ga0308190_10619692	3300030993	Soil	PMGAAMNKRDTEECLKRAKECARQVDAAVDPELKVYLMKLALLWTQAAGETVERGLRAPSGRPTVTKSASRPLPQ
Ga0308189_103266461	3300031058	Soil	GHPTGAAMNKRETEECLKRAKECARQADAALDPELKIYLMKLALSWTQAAGETVERELRASSGRPAITKSASLPLPQ
Ga0308201_100407522	3300031091	Soil	AGRPTGAAMNKRDTEECLKRAKECARQADVAVDPELKIYLMKLALSWTQAAGETVERELRRSSGRSPVTRSASRPLPQ
Ga0308201_100957901	3300031091	Soil	HPTGAAMNKRETEECLKRAKECARQADAALDPELKIYLMKLALSWTQAAGETVERELRASSGRPAITKSASLPLPQ
Ga0308201_104367441	3300031091	Soil	MGAAMNKRATEECLKRAKECARQADAAVEPELKIYLMKLALSWTQAAGETVERELRASSGRTDVTKSASRPLPQ
Ga0308204_102767532	3300031092	Soil	GHPMGAAMNKRDTEECLKRAKECARQVDAAVDPELKVYLMKLALLWTQAAGETVERELRAPSGRPTVTKSASRPLPQ
Ga0308197_103609312	3300031093	Soil	MNKRDTEECLKRAKECARQADAAVEPELKIYLMKLGLSWTQAAGETVERELRDSSRRPDLTKSATRPLPQ
Ga0307499_102809422	3300031184	Soil	MNKRETEECLKRAKECARQADAALDPELKIYLMKLALSWTQAAGETVERELRASSGRSAVTKSASRPLPQ
Ga0310907_102160451	3300031847	Soil	MNKRDTEECLKRANECARQADAAVEPELKIYLMKLALSWTQAAGETVERELRASSGRPDV
Ga0310900_109415081	3300031908	Soil	VYYVSPRPPTGAAMNKRDTEECLKRANECARQADAAVEPELNLMKLALSWTQAAGETVERELRASSGRPDVTKSASRPLPQ
Ga0310890_109871422	3300032075	Soil	MNKRDTEECLKRANECARQADAAVEPELKIYLMKLALSWTQAAGETVERELRASSGRPDVTKSASRPL
Ga0364925_0128694_263_475	3300034147	Sediment	MNKRDTEECLKRANECARQADSAVEPELKIYLMKLALSWTQAAGETVERELRASSGRPDVTKSASRPLPQ

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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