Metagenome Family F101497

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F101497
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	38 residues
Representative Sequence	MTEKGRLIFRIKDLILKCRLRGKFKLAIQLKKKLENL
Number of Associated Samples	76
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	83.17 %
% of genes near scaffold ends (potentially truncated)	15.69 %
% of genes from short scaffolds (< 2000 bps)	72.55 %
Associated GOLD sequencing projects	68
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Duplodnaviria (55.882 % of family members)
NCBI Taxonomy ID	2731341
Taxonomy	All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (23.529 % of family members)
Environment Ontology (ENVO)	Unclassified (85.294 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (89.216 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 49.23% β-sheet: 0.00% Coil/Unstructured: 50.77%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.56
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.56
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF13730	HTH_36	17.65
PF04404	ERF	2.94
PF01541	GIY-YIG	0.98
PF11753	DUF3310	0.98
PF00145	DNA_methylase	0.98
PF03592	Terminase_2	0.98
PF13759	2OG-FeII_Oxy_5	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0270	DNA-cytosine methylase	Replication, recombination and repair [L]	0.98
COG3728	Phage terminase, small subunit	Mobilome: prophages, transposons [X]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.67 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	65.69 %
Unclassified	root	N/A	33.33 %
cellular organisms	root	All Organisms → cellular organisms	0.98 %

Name	Rank	Taxonomy	Distribution
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	55.88 %
Unclassified	root	N/A	33.33 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.98 %

Name	Rank	Taxonomy	Distribution
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	55.88 %
Unclassified	root	N/A	33.33 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.98 %

Name	Rank	Taxonomy	Distribution
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	55.88 %
Unclassified	root	N/A	33.33 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.98 %

Name	Rank	Taxonomy	Distribution
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	55.88 %
Unclassified	root	N/A	33.33 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	10.78 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	4.90 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Siphoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae	9.80 %
uncultured Mediterranean phage uvDeep-CGR2-KM24-C165	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-KM24-C165	4.90 %
Podoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae	0.98 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
unclassified Siphoviridae	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → unclassified Siphoviridae	9.80 %
uncultured Mediterranean phage uvDeep-CGR2-KM24-C165	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-KM24-C165	4.90 %
Podoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae	0.98 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Pelagibacter phage HTVC010P	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → unclassified Siphoviridae → Pelagibacter phage HTVC010P	9.80 %
uncultured Mediterranean phage uvDeep-CGR2-KM24-C165	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-KM24-C165	4.90 %
Podoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae	0.98 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000101\|DelMOSum2010_c10004876	Not Available	9574	Open in IMG/M
3300000101\|DelMOSum2010_c10146900	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	873	Open in IMG/M
3300000101\|DelMOSum2010_c10152919	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	843	Open in IMG/M
3300000101\|DelMOSum2010_c10234858	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	588	Open in IMG/M
3300000116\|DelMOSpr2010_c10163059	All Organisms → Viruses	750	Open in IMG/M
3300000116\|DelMOSpr2010_c10185724	Not Available	678	Open in IMG/M
3300000116\|DelMOSpr2010_c10228845	Not Available	578	Open in IMG/M
3300000116\|DelMOSpr2010_c10259168	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	526	Open in IMG/M
3300000116\|DelMOSpr2010_c10261248	Not Available	523	Open in IMG/M
3300001450\|JGI24006J15134_10163163	Not Available	717	Open in IMG/M
3300001450\|JGI24006J15134_10238081	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	530	Open in IMG/M
3300001460\|JGI24003J15210_10097420	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	850	Open in IMG/M
3300001472\|JGI24004J15324_10119388	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	648	Open in IMG/M
3300001472\|JGI24004J15324_10158637	Not Available	515	Open in IMG/M
3300001718\|JGI24523J20078_1035706	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	555	Open in IMG/M
3300003620\|JGI26273J51734_10002936	Not Available	8515	Open in IMG/M
3300004460\|Ga0066222_1018100	Not Available	679	Open in IMG/M
3300006027\|Ga0075462_10009447	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	3152	Open in IMG/M
3300006190\|Ga0075446_10003854	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → unclassified Siphoviridae → Pelagibacter phage HTVC010P	5713	Open in IMG/M
3300006190\|Ga0075446_10095267	Not Available	876	Open in IMG/M
3300006467\|Ga0099972_12522418	Not Available	593	Open in IMG/M
3300006802\|Ga0070749_10246136	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1014	Open in IMG/M
3300006802\|Ga0070749_10399681	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	758	Open in IMG/M
3300006810\|Ga0070754_10248764	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	812	Open in IMG/M
3300006810\|Ga0070754_10421774	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	581	Open in IMG/M
3300006990\|Ga0098046_1131026	Not Available	544	Open in IMG/M
3300007344\|Ga0070745_1045932	Not Available	1815	Open in IMG/M
3300007345\|Ga0070752_1054085	Not Available	1829	Open in IMG/M
3300007555\|Ga0102817_1161657	Not Available	502	Open in IMG/M
3300009001\|Ga0102963_1146836	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	952	Open in IMG/M
3300009074\|Ga0115549_1008877	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → unclassified Siphoviridae → Pelagibacter phage HTVC010P	4557	Open in IMG/M
3300009074\|Ga0115549_1033123	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-KM24-C165	1937	Open in IMG/M
3300009076\|Ga0115550_1104296	All Organisms → Viruses	1043	Open in IMG/M
3300009077\|Ga0115552_1133980	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1049	Open in IMG/M
3300009149\|Ga0114918_10304834	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	889	Open in IMG/M
3300009193\|Ga0115551_1251406	Not Available	781	Open in IMG/M
3300009426\|Ga0115547_1259830	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	542	Open in IMG/M
3300009445\|Ga0115553_1301262	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	619	Open in IMG/M
3300009467\|Ga0115565_10294199	Not Available	739	Open in IMG/M
3300009472\|Ga0115554_1210437	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	786	Open in IMG/M
3300009495\|Ga0115571_1200086	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-KM24-C165	817	Open in IMG/M
3300009495\|Ga0115571_1305605	Not Available	632	Open in IMG/M
3300009526\|Ga0115004_10161233	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-KM24-C165	1353	Open in IMG/M
3300009705\|Ga0115000_10351036	Not Available	946	Open in IMG/M
3300009785\|Ga0115001_10953788	Not Available	514	Open in IMG/M
3300010300\|Ga0129351_1344850	Not Available	559	Open in IMG/M
3300010368\|Ga0129324_10262359	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	686	Open in IMG/M
3300010392\|Ga0118731_100699240	Not Available	689	Open in IMG/M
3300013010\|Ga0129327_10051117	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2066	Open in IMG/M
3300017717\|Ga0181404_1083351	All Organisms → Viruses	789	Open in IMG/M
3300017717\|Ga0181404_1181519	Not Available	503	Open in IMG/M
3300017724\|Ga0181388_1161989	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	530	Open in IMG/M
3300017731\|Ga0181416_1058923	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	907	Open in IMG/M
3300017734\|Ga0187222_1111423	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	616	Open in IMG/M
3300017783\|Ga0181379_1299173	Not Available	547	Open in IMG/M
3300020165\|Ga0206125_10221563	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-KM24-C165	730	Open in IMG/M
3300020175\|Ga0206124_10122551	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1063	Open in IMG/M
3300020438\|Ga0211576_10544655	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	583	Open in IMG/M
3300021375\|Ga0213869_10000409	All Organisms → Viruses	35626	Open in IMG/M
3300021375\|Ga0213869_10071506	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1745	Open in IMG/M
3300021389\|Ga0213868_10034941	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	3674	Open in IMG/M
3300021957\|Ga0222717_10144432	Not Available	1453	Open in IMG/M
3300022072\|Ga0196889_1006645	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → unclassified Siphoviridae → Pelagibacter phage HTVC010P	2652	Open in IMG/M
3300022178\|Ga0196887_1011907	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → unclassified Siphoviridae → Pelagibacter phage HTVC010P	2766	Open in IMG/M
3300022178\|Ga0196887_1023824	Not Available	1783	Open in IMG/M
3300022183\|Ga0196891_1017928	Not Available	1361	Open in IMG/M
3300022218\|Ga0224502_10126562	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	975	Open in IMG/M
3300022825\|Ga0222669_1000657	All Organisms → Viruses	9621	Open in IMG/M
(restricted) 3300023210\|Ga0233412_10420266	Not Available	600	Open in IMG/M
3300025048\|Ga0207905_1004907	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → unclassified Siphoviridae → Pelagibacter phage HTVC010P	2532	Open in IMG/M
3300025048\|Ga0207905_1047575	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	665	Open in IMG/M
3300025079\|Ga0207890_1021981	All Organisms → Viruses → Predicted Viral	1222	Open in IMG/M
3300025079\|Ga0207890_1063093	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	605	Open in IMG/M
3300025120\|Ga0209535_1005612	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → unclassified Siphoviridae → Pelagibacter phage HTVC010P	7673	Open in IMG/M
3300025120\|Ga0209535_1014253	All Organisms → Viruses	4281	Open in IMG/M
3300025120\|Ga0209535_1023738	All Organisms → Viruses	3041	Open in IMG/M
3300025120\|Ga0209535_1023849	All Organisms → Viruses	3031	Open in IMG/M
3300025120\|Ga0209535_1042325	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2022	Open in IMG/M
3300025120\|Ga0209535_1144417	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	762	Open in IMG/M
3300025128\|Ga0208919_1161305	Not Available	690	Open in IMG/M
3300025168\|Ga0209337_1035038	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2741	Open in IMG/M
3300025276\|Ga0208814_1019897	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → unclassified Siphoviridae → Pelagibacter phage HTVC010P	2251	Open in IMG/M
3300025543\|Ga0208303_1002828	Not Available	6451	Open in IMG/M
3300025543\|Ga0208303_1006843	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → unclassified Siphoviridae → Pelagibacter phage HTVC010P	3760	Open in IMG/M
3300025577\|Ga0209304_1010977	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	3315	Open in IMG/M
3300025632\|Ga0209194_1014972	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2833	Open in IMG/M
3300025652\|Ga0208134_1026517	All Organisms → Viruses	2090	Open in IMG/M
3300025655\|Ga0208795_1176279	Not Available	516	Open in IMG/M
3300025680\|Ga0209306_1096191	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	885	Open in IMG/M
3300025704\|Ga0209602_1068686	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-KM24-C165	1366	Open in IMG/M
3300025816\|Ga0209193_1029387	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1658	Open in IMG/M
3300025876\|Ga0209223_10265834	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	797	Open in IMG/M
3300025889\|Ga0208644_1288351	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	658	Open in IMG/M
3300027522\|Ga0209384_1002815	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae	7815	Open in IMG/M
3300027668\|Ga0209482_1028038	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → unclassified Siphoviridae → Pelagibacter phage HTVC010P	2310	Open in IMG/M
3300027752\|Ga0209192_10317750	Not Available	556	Open in IMG/M
3300031519\|Ga0307488_10842802	Not Available	503	Open in IMG/M
3300031658\|Ga0307984_1146500	Not Available	661	Open in IMG/M
3300032277\|Ga0316202_10032642	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2496	Open in IMG/M
3300032277\|Ga0316202_10089482	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → unclassified Siphoviridae → Pelagibacter phage HTVC010P	1427	Open in IMG/M
3300034374\|Ga0348335_056804	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1465	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	98.04%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	1.96%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	28.43%
Oceanic	Environmental → Aquatic → Marine → Oceanic	25.49%
Pelagic	Environmental → Aquatic → Marine → Pelagic	17.65%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	9.80%
Unclassified	Environmental → Aquatic → Marine → Unclassified	6.86%
Strait	Environmental → Aquatic → Marine → Strait	5.88%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.96%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	1.96%
Inlet	Environmental → Aquatic → Marine → Inlet	0.98%
Sediment	Environmental → Aquatic → Marine → Sediment	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	24.51%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	24.51%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	17.65%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	9.80%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	6.86%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	5.88%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	3.92%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	1.96%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	0.98%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	0.98%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	0.98%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.98%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	23.53%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	16.67%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	15.69%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	8.82%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	5.88%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	4.90%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	2.94%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	2.94%
Marine	Environmental → Aquatic → Marine → Coastal → Sediment → Marine	1.96%
Microbial Mat	Environmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat	1.96%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	1.96%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	0.98%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	0.98%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	0.98%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	0.98%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.98%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	0.98%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.98%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	0.98%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.98%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	0.98%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	0.98%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	0.98%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000101	Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010	Environmental	Open in IMG/M
3300000116	Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010	Environmental	Open in IMG/M
3300001450	Marine viral communities from the Pacific Ocean - LP-53	Environmental	Open in IMG/M
3300001460	Marine viral communities from the Pacific Ocean - LP-28	Environmental	Open in IMG/M
3300001472	Marine viral communities from the Pacific Ocean - LP-32	Environmental	Open in IMG/M
3300001718	Marine viral communities from the Pacific Ocean - LP-48	Environmental	Open in IMG/M
3300003620	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_125m_DNA	Environmental	Open in IMG/M
3300004460	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300006027	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA	Environmental	Open in IMG/M
3300006190	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNA	Environmental	Open in IMG/M
3300006467	Coastal sediment microbial communities from Rhode Island, USA: Combined Assembly of Gp0121717, Gp0123912, Gp0123935	Environmental	Open in IMG/M
3300006752	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01	Environmental	Open in IMG/M
3300006990	Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG	Environmental	Open in IMG/M
3300007344	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4	Environmental	Open in IMG/M
3300007345	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30	Environmental	Open in IMG/M
3300007555	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.555	Environmental	Open in IMG/M
3300009001	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG	Environmental	Open in IMG/M
3300009074	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430	Environmental	Open in IMG/M
3300009076	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100511	Environmental	Open in IMG/M
3300009077	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328	Environmental	Open in IMG/M
3300009149	Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaG	Environmental	Open in IMG/M
3300009193	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321	Environmental	Open in IMG/M
3300009426	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100420	Environmental	Open in IMG/M
3300009445	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110331	Environmental	Open in IMG/M
3300009467	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110530	Environmental	Open in IMG/M
3300009472	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110404	Environmental	Open in IMG/M
3300009495	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531	Environmental	Open in IMG/M
3300009526	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90	Environmental	Open in IMG/M
3300009705	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128	Environmental	Open in IMG/M
3300009785	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130	Environmental	Open in IMG/M
3300010300	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_DNA	Environmental	Open in IMG/M
3300010368	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNA	Environmental	Open in IMG/M
3300010392	Coastal sediment microbial communities from Rhode Island, USA. Combined Assembly of Gp0121717, Gp0123912, Gp0123935, Gp0139423, Gp0139424, Gp0139388, Gp0139387, Gp0139386, Gp0139385	Environmental	Open in IMG/M
3300013010	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.8_DNA	Environmental	Open in IMG/M
3300017717	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 27 SPOT_SRF_2011-10-25	Environmental	Open in IMG/M
3300017724	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 11 SPOT_SRF_2010-05-17	Environmental	Open in IMG/M
3300017731	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 39 SPOT_SRF_2013-01-16	Environmental	Open in IMG/M
3300017734	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 4 SPOT_SRF_2009-09-24 (version 2)	Environmental	Open in IMG/M
3300017783	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 2 SPOT_SRF_2009-07-10	Environmental	Open in IMG/M
3300020165	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1	Environmental	Open in IMG/M
3300020175	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160321_2	Environmental	Open in IMG/M
3300020438	Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)	Environmental	Open in IMG/M
3300021375	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO132	Environmental	Open in IMG/M
3300021389	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO127	Environmental	Open in IMG/M
3300021957	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18D	Environmental	Open in IMG/M
3300022072	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v3)	Environmental	Open in IMG/M
3300022178	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v3)	Environmental	Open in IMG/M
3300022183	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v3)	Environmental	Open in IMG/M
3300022218	Sediment microbial communities from San Francisco Bay, California, United States - SF_Oct11_sed_USGS_13	Environmental	Open in IMG/M
3300022825	Saline water microbial communities from Ace Lake, Antarctica - #730	Environmental	Open in IMG/M
3300023210 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_4_MG	Environmental	Open in IMG/M
3300025048	Marine viral communities from the Subarctic Pacific Ocean - LP-49 (SPAdes)	Environmental	Open in IMG/M
3300025079	Marine viral communities from the Pacific Ocean - LP-48 (SPAdes)	Environmental	Open in IMG/M
3300025120	Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)	Environmental	Open in IMG/M
3300025128	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)	Environmental	Open in IMG/M
3300025168	Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)	Environmental	Open in IMG/M
3300025276	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55 (SPAdes)	Environmental	Open in IMG/M
3300025543	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025577	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100423 (SPAdes)	Environmental	Open in IMG/M
3300025632	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413 (SPAdes)	Environmental	Open in IMG/M
3300025652	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (SPAdes)	Environmental	Open in IMG/M
3300025655	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025680	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328 (SPAdes)	Environmental	Open in IMG/M
3300025704	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524 (SPAdes)	Environmental	Open in IMG/M
3300025816	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330 (SPAdes)	Environmental	Open in IMG/M
3300025876	Pelagic Microbial community sample from North Sea - COGITO 998_met_06 (SPAdes)	Environmental	Open in IMG/M
3300025889	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)	Environmental	Open in IMG/M
3300027522	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNA (SPAdes)	Environmental	Open in IMG/M
3300027668	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG104-DNA (SPAdes)	Environmental	Open in IMG/M
3300027752	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154 (SPAdes)	Environmental	Open in IMG/M
3300031519	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2	Environmental	Open in IMG/M
3300031658	Marine microbial communities from Ellis Fjord, Antarctic Ocean - #78	Environmental	Open in IMG/M
3300032277	Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 3-month pyrrhotite	Environmental	Open in IMG/M
3300034374	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v4)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSum2010_1000487622	3300000101	Marine	MSERDWLIFRIKDLILKCRSKGKFLLAIKLKNKLKEIK*
DelMOSum2010_101469002	3300000101	Marine	MTDKDRLIFRIKDLILKCRLRGKFKLAIQLKKKLESL*
DelMOSum2010_101529192	3300000101	Marine	MTKKGRLIFRIKDLILKCRSRGKFKLAIQLKKKLESL*
DelMOSum2010_102348581	3300000101	Marine	MTKKGRLIFRIKDLILKCRLRGKFKLAIQLKKKLENLSW*
DelMOSpr2010_101630592	3300000116	Marine	MTNKGRLIFRIKDLILKCRSRGKFKLAIKLKNKLDNLSW*
DelMOSpr2010_101857242	3300000116	Marine	MTEKDRLIFXIKDLILKCRLRGKFKLAIQLKKKLENLSNGX*
DelMOSpr2010_102288452	3300000116	Marine	MTERDRLIFRIKDLILKCRLRGKFKLAIQLKKKLESI*
DelMOSpr2010_102591682	3300000116	Marine	MTDKDRLIFRIKDLILKCRMRGKFKIAIQLKKKLESL*
DelMOSpr2010_102612482	3300000116	Marine	MTDKGKLIFRIKTLILKCRSKGKFKLAIKLKKKLESI*
JGI24006J15134_101631632	3300001450	Marine	MTKKGRLIFXIKDLILKCRSRGKFKLAIQLKKKLESL*
JGI24006J15134_102380812	3300001450	Marine	MTEKDKLIFRIKDLILKCRSRGKFKLAIQLKKKLESI*
JGI24003J15210_100974202	3300001460	Marine	MTEKGRLIFRIKDLILKCRLRGKFKLAIKLKNKLENLSW*
JGI24004J15324_101193882	3300001472	Marine	MTXKDRLIFXIKDLILKCRMKGKFKLAIKLKKKLESI*
JGI24004J15324_101586372	3300001472	Marine	MTDKDKLIFRXKTLILKCRSKGKFKLAIKLKNKLYNL*
JGI24523J20078_10357062	3300001718	Marine	MTERDRLIFRIKDLILKCRLRGKFKLAIKLKNKLDNLSW*
JGI26273J51734_1000293622	3300003620	Marine	MTNKGKIIFRIKDLILKCRMKGKFKMAIKLKNILKRITDRS*
Ga0066222_10181001	3300004460	Marine	QRKPKKMTNKDKLIFRIKTLILKCRSKGKFKLAIRLKKKLESI*
Ga0075462_100094478	3300006027	Aqueous	MTNKGRLIFRIKDLILKCRSRGKFKLAIKLKKKLENLSW*
Ga0075446_100038545	3300006190	Marine	MTDKDRLIFRIKDLILKCRSRGKFKLAIKLKKKLDNL*
Ga0075446_100952672	3300006190	Marine	MTNKDKLIFRLKTLILKCRLKGKFKLAIKLKNKLDNL*
Ga0099972_125224182	3300006467	Marine	MTEKDRLIFRIKDLILKCRLRGKFKLAIQLKKKLENLSW*
Ga0098048_11048442	3300006752	Marine	MTNKGKIIFRIKDLILKCRMKGKFKMAIKLKNILKRITDRI*
Ga0070749_102461362	3300006802	Aqueous	MTDKGRLIFRIKDLILKCRSRGKFKLAIKLKNKLDNLSW*
Ga0070749_103996812	3300006802	Aqueous	MTEKDRLIFRIKDLILKCRSRGKFKLAIQLKKKLESL*
Ga0070754_102487641	3300006810	Aqueous	MTDKDKLIFRIKTLILKCRSKGKFKLAIKLKNKLESI*
Ga0070754_104217742	3300006810	Aqueous	MTKKGRLIFRIKDLILKCRLRGKFKLAIQLKKKLESI*
Ga0098046_11310261	3300006990	Marine	KGRLIFRIKDLILKCRLRGKFKLAIQLKKKLESL*
Ga0070745_10459326	3300007344	Aqueous	MTKKGRLIFRIKDLILKCRLRGKFKLAIQLKKKLESL*
Ga0070752_10540854	3300007345	Aqueous	MTEKDRLIFRIKDLILKCRLRGKFKLAIQLKKKLESL*
Ga0102817_11616571	3300007555	Estuarine	MTDKDRLIFRIKDLILKCRSRGKFKLAIKLKKKLENLSW*
Ga0102963_11468362	3300009001	Pond Water	MTDKGRLIFRIKDLILKCRSRGKFKLAIKLKNKLENL*
Ga0115549_10088772	3300009074	Pelagic Marine	MTEKGRLIFRIKDLILKCRLKGKFKLAIQLKKKLENLLW*
Ga0115549_10331238	3300009074	Pelagic Marine	TKKMTEKDRLIFRIKDLILKCRLRGKFKLAIQIKKKLESI*
Ga0115550_11042962	3300009076	Pelagic Marine	MTEKGRLIFRIKDLILKCRLKGKFKLAMQLKKKLESL*
Ga0115552_11339802	3300009077	Pelagic Marine	MTERDRLIFRIKDLILKCRMKGKFKVAIQLKKKLENI*
Ga0114918_103048342	3300009149	Deep Subsurface	MTEKGRLIFRIKDLILKCRLRGKFKLAIQLKKKLENL*
Ga0115551_12514064	3300009193	Pelagic Marine	MNKRDWLIFRIKDLILKCRLKGKFLCAIKLKNKLKEIK*
Ga0115547_12598302	3300009426	Pelagic Marine	MTEKGRLIFRIKDLILKCRLRGKFKLAMQLKKKLESL*
Ga0115553_13012622	3300009445	Pelagic Marine	MTDKERLIFRIKDLILKCRSRGKFKLAIKLKNKLDNLSW*
Ga0115565_102941992	3300009467	Pelagic Marine	MTNKGRLIFRIKDLILKCRSRGKFKLAIKLKNKLENL*
Ga0115554_12104371	3300009472	Pelagic Marine	MTRKGRLIFRIKDLILKCRLKGKFKLAIKLKNKLDNLSW*
Ga0115571_12000861	3300009495	Pelagic Marine	DKGRLIFRIKDLILKCRSRGKFKLAIKLKNKLDNLSW*
Ga0115571_13056052	3300009495	Pelagic Marine	MTNKGKIIFRIKDLILKCRMKGKFKMAIKLKNILKRITYRS*
Ga0115004_101612333	3300009526	Marine	MTDKDKLIFKIKTLILKCRSKGKFKLAIKLKNKLESI*
Ga0115000_103510361	3300009705	Marine	MTDKGKLIFRIKTLILKCRLKGKFKLAIKLKKKLESI*
Ga0115001_109537882	3300009785	Marine	MTDKDKLIFRIKTLILKCRSKGKFKLAIKLKKKLESI*
Ga0129351_13448502	3300010300	Freshwater To Marine Saline Gradient	MTKKGRLIFRIKDLILKCRSRGKFKLAIQLKKKLENI*
Ga0129324_102623592	3300010368	Freshwater To Marine Saline Gradient	MTEKGRLIFRIKDLILKCRLRGKFKLAIQLKKKLESL*
Ga0118731_1006992401	3300010392	Marine	LQRKPKKMTNKGKLIFRIKTLILKCRSKGKFKLAIKLKKKLESI*
Ga0129327_100511172	3300013010	Freshwater To Marine Saline Gradient	MKKKDRLIFRIKDLILKCRLRGKFKLAIQLKKKLESI*
Ga0181404_10833512	3300017717	Seawater	MTERDRLIFRIKDLILKCRLRGKFKLAIQLKKKLESL
Ga0181404_11815192	3300017717	Seawater	MTKKGRLIFRIKDLILKCRLRGKFKLAIQLKKKLDNL
Ga0181388_11619892	3300017724	Seawater	MTERDRLIFRIKDLILKCRSRGKFKLAIQLKKKLESL
Ga0181416_10589231	3300017731	Seawater	MTDKDRLIFRIKDLILKCRSRGKFKLAIQLKKKLESL
Ga0187222_11114232	3300017734	Seawater	MTKKGRLIFRIKDLILKCRSRGKFKLAIQLKKKLENLSW
Ga0181379_12991732	3300017783	Seawater	MTEKGKLIFRIKDLILKCRLRGKFKLAIQLKKKLENLSW
Ga0206125_102215631	3300020165	Seawater	EMTDKGRLIFRIKDLILKCRSRGKFKLAIKLKNKLENL
Ga0206124_101225514	3300020175	Seawater	MTKKGRLIFRIKDLILKCRLRGKFKLAIQLKKKLESL
Ga0211576_105446551	3300020438	Marine	MTEKGRLIFRIKDLILKCRLRGKFKLAIQLKKKLES
Ga0213869_100004092	3300021375	Seawater	MTNKGKIIFRIKDLILKCRMKGKFKMAIKLKNILKRITDRS
Ga0213869_100715064	3300021375	Seawater	MTDKGRLIFRIKDLILKCRSRGKFKLAIKLKKKLENLSW
Ga0213868_100349411	3300021389	Seawater	MTKKGRLIFRIKDLILKCRSRGKFKLAIQLKKKLESI
Ga0222717_101444322	3300021957	Estuarine Water	MTNKGKIIFRIKDLILKCRMKGKFKMAIKLKNILNQLSDRS
Ga0196889_10066456	3300022072	Aqueous	MTNKGRLIFRIKDLILKCRSRGKFKLAIKLKKKLENLSW
Ga0196887_10119072	3300022178	Aqueous	MTKKGRLIFRIKDLISKCRSRGKFKLAIQLKKKLESL
Ga0196887_10238243	3300022178	Aqueous	MSERDWLIFRIKDLILKCRSKGKFLLAIKLKNKLKEIK
Ga0196891_10179283	3300022183	Aqueous	MTEKGRLIFRIKDLILKCRLRGKFKLAIQLKKKLENLSW
Ga0224502_101265623	3300022218	Sediment	MTEKGRLIFRIKDLILKCRLRGKFKLAIQLKKKLESL
Ga0222669_100065732	3300022825	Saline Water	MTNKDKLIFRLKTLILKCRSRGKFKLAIKLKNKLDNL
(restricted) Ga0233412_104202662	3300023210	Seawater	MTNKGKIIFRIKDLILKCRMKGKFKLAIKLKNKLDNLLW
Ga0207905_10049077	3300025048	Marine	MTEKDRLIFRIKDLILKCRSRGKFKLAIQLKKKLESL
Ga0207905_10475752	3300025048	Marine	MTERDRLIFRIKDLILKCRSRGKFKLAIKLKNKLDNLSW
Ga0207890_10219812	3300025079	Marine	MTKKGRLIFRIKDLILKCRLRGKFKLAIKLKKKLENLSW
Ga0207890_10630931	3300025079	Marine	MTERDRLIFRIKDLILKCRLRGKFKLAIKLKNKLDNLSW
Ga0209535_100561216	3300025120	Marine	MTKKGRLIFRIKDLILKCRSRGKFKLAIKLKNKLESLSW
Ga0209535_101425311	3300025120	Marine	MTEKDRLIFRIKDLILKCRSRGKFKLAIQLKKKLDNL
Ga0209535_10237389	3300025120	Marine	MTERDRLIFRIKDLILKCRSRGKFKLAIQLKKKLDNL
Ga0209535_10238492	3300025120	Marine	MTKKGRLIFRIKDLILKCRSRGKFKLAIQLKKKLESL
Ga0209535_10423252	3300025120	Marine	MTDKDKLIFRIKTLILKCRSKGKFKLAIKLKNKLYNL
Ga0209535_11444172	3300025120	Marine	MTEKGRLIFRIKDLILKCRLRGKFKLAIKLKNKLENLSW
Ga0208919_11613052	3300025128	Marine	MTEKGRLIFRIKDLILKCRMKGKFKLAIQLKKKLESI
Ga0209337_10350388	3300025168	Marine	MTDKDRLIFRIKDLILKCRSRGKFKLAIQLKKKLESI
Ga0208814_10198974	3300025276	Deep Ocean	MTDKDRLIFRIKDLILKCRSRGKFKLAINLKKKLDNL
Ga0208303_10028287	3300025543	Aqueous	MTEKGRLIFRIKDLILKCRLRGKFKLAIQLKKKLESI
Ga0208303_10068432	3300025543	Aqueous	MKKKDRLIFRIKDLILKCRLRGKFKLAIQLKKKLESI
Ga0209304_10109778	3300025577	Pelagic Marine	MTEKGRLIFRIKDLILKCRLKGKFKLAMQLKKKLESL
Ga0209194_10149724	3300025632	Pelagic Marine	MTEKGRLIFRIKDLILKCRLRGKFKLAIQLKKKLENL
Ga0208134_10265172	3300025652	Aqueous	MTERDRLIFRIKDLILKCRLRGKFKLAIQLKKKLESI
Ga0208795_11762792	3300025655	Aqueous	LQRETKEMTNKGRLIFRIKDLILKCRSRGKFKLAIKLKNKLDNLSW
Ga0209306_10961912	3300025680	Pelagic Marine	MTERDRLIFRIKDLILKCRMKGKFKVAIQLKKKLENI
Ga0209602_10686861	3300025704	Pelagic Marine	KEMTDKGRLIFRIKDLILKCRSRGKFKLAIKLKNKLDNLSW
Ga0209193_10293877	3300025816	Pelagic Marine	QRETKKMTEKDRLIFRIKDLILKCRLRGKFKLAIQLKKKLENLLW
Ga0209223_102658342	3300025876	Pelagic Marine	MTNKGRLIFRIKDLILKCRSRGKFKLAIKLKNKLDNL
Ga0208644_12883511	3300025889	Aqueous	MTDKGRLIFRIKDLILKCRSRGKFKLAIKLKNKLDN
Ga0209384_10028155	3300027522	Marine	MTDKDRLIFRIKDLILKCRSRGKFKLAIKLKKKLDNL
Ga0209482_10280381	3300027668	Marine	MTNKDKLIFRLKTLILKCRSRGKFKLAIKLNNKLDNL
Ga0209192_103177502	3300027752	Marine	MTDKDKLIFRIKTLILKCRSKGKFKLAIKLKKKLESI
Ga0307488_108428021	3300031519	Sackhole Brine	MTNKDKLIFRIKTLILKCRSKGKFKLAIKLKKKLESI
Ga0307984_11465002	3300031658	Marine	MTNKDKLIFRLKTLILKCRSQGKFKLAIKLKNKLDNL
Ga0316202_100326421	3300032277	Microbial Mat	KEMTNKGRLIFRIKDLILKCRSRGKFKLAIKLKKKLENLSW
Ga0316202_100894821	3300032277	Microbial Mat	MTDKGRLIFRIKDLILKCRSRGKFKLAIKLKNKLDNLSW
Ga0348335_056804_1334_1465	3300034374	Aqueous	ETKEMTDKGRLIFRIKDLILKCRSRGKFKLAIKLKNKLDNLSW

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters