NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F101491

Metagenome Family F101491

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F101491
Family Type Metagenome
Number of Sequences 102
Average Sequence Length 56 residues
Representative Sequence MEQKTPTPLNILYDKSTEPNRDRFSFAFSSDINDWIYSKQRRYDKKAYQIKAEKKS
Number of Associated Samples 71
Number of Associated Scaffolds 102

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 27.45 %
% of genes from short scaffolds (< 2000 bps) 78.43 %
Associated GOLD sequencing projects 58
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (82.353 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine
(29.412 % of family members)
Environment Ontology (ENVO) Unclassified
(87.255 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(89.216 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 32.14%    Coil/Unstructured: 67.86%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 102 Family Scaffolds
PF04404ERF 32.35
PF05766NinG 13.73
PF13481AAA_25 3.92
PF08291Peptidase_M15_3 1.96
PF08299Bac_DnaA_C 1.96
PF13884Peptidase_S74 0.98

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 102 Family Scaffolds
COG0593Chromosomal replication initiation ATPase DnaAReplication, recombination and repair [L] 1.96


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A82.35 %
All OrganismsrootAll Organisms17.65 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000101|DelMOSum2010_c10026175Not Available3288Open in IMG/M
3300000101|DelMOSum2010_c10183211All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.723Open in IMG/M
3300000101|DelMOSum2010_c10224819All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.610Open in IMG/M
3300000101|DelMOSum2010_c10228857Not Available601Open in IMG/M
3300000115|DelMOSum2011_c10075187Not Available1197Open in IMG/M
3300000115|DelMOSum2011_c10089899Not Available1038Open in IMG/M
3300000116|DelMOSpr2010_c10005025Not Available7342Open in IMG/M
3300000116|DelMOSpr2010_c10227299Not Available581Open in IMG/M
3300001349|JGI20160J14292_10069586Not Available1426Open in IMG/M
3300002930|Water_103163All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium2735Open in IMG/M
3300004097|Ga0055584_100517568Not Available1242Open in IMG/M
3300004448|Ga0065861_1020874All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas → Xanthomonas oryzae896Open in IMG/M
3300004460|Ga0066222_1004131Not Available8397Open in IMG/M
3300005239|Ga0073579_1170432Not Available25203Open in IMG/M
3300006029|Ga0075466_1025605Not Available1877Open in IMG/M
3300006190|Ga0075446_10105699Not Available822Open in IMG/M
3300006191|Ga0075447_10157203Not Available761Open in IMG/M
3300006920|Ga0070748_1260776Not Available622Open in IMG/M
3300006920|Ga0070748_1269141Not Available610Open in IMG/M
3300007276|Ga0070747_1251788Not Available613Open in IMG/M
3300007538|Ga0099851_1101561Not Available1095Open in IMG/M
3300007540|Ga0099847_1085884Not Available966Open in IMG/M
3300007540|Ga0099847_1154190Not Available682Open in IMG/M
3300008221|Ga0114916_1034125Not Available1550Open in IMG/M
3300009071|Ga0115566_10368762Not Available833Open in IMG/M
3300009074|Ga0115549_1026906All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas → Xanthomonas oryzae2211Open in IMG/M
3300009076|Ga0115550_1049249All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas → Xanthomonas oryzae1737Open in IMG/M
3300009076|Ga0115550_1143846Not Available839Open in IMG/M
3300009076|Ga0115550_1178918Not Available725Open in IMG/M
3300009077|Ga0115552_1314352Not Available624Open in IMG/M
3300009149|Ga0114918_10199324Not Available1164Open in IMG/M
3300009193|Ga0115551_1334694Not Available657Open in IMG/M
3300009420|Ga0114994_10189332Not Available1387Open in IMG/M
3300009420|Ga0114994_10816169Not Available606Open in IMG/M
3300009434|Ga0115562_1176978Not Available778Open in IMG/M
3300009437|Ga0115556_1212627Not Available695Open in IMG/M
3300009437|Ga0115556_1238523Not Available648Open in IMG/M
3300009445|Ga0115553_1191140Not Available820Open in IMG/M
3300009445|Ga0115553_1280423Not Available646Open in IMG/M
3300009472|Ga0115554_1429433Not Available515Open in IMG/M
3300009495|Ga0115571_1084655All Organisms → Viruses → Predicted Viral1397Open in IMG/M
3300009495|Ga0115571_1146489Not Available993Open in IMG/M
3300009495|Ga0115571_1204634Not Available806Open in IMG/M
3300009495|Ga0115571_1285359Not Available658Open in IMG/M
3300009495|Ga0115571_1330049Not Available604Open in IMG/M
3300009496|Ga0115570_10192439Not Available927Open in IMG/M
3300009496|Ga0115570_10490726Not Available513Open in IMG/M
3300009505|Ga0115564_10417637Not Available654Open in IMG/M
3300009512|Ga0115003_10818436All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon TMED97541Open in IMG/M
3300009526|Ga0115004_10370205Not Available849Open in IMG/M
3300010316|Ga0136655_1012580Not Available2966Open in IMG/M
3300010368|Ga0129324_10324594Not Available602Open in IMG/M
3300010368|Ga0129324_10420410Not Available515Open in IMG/M
3300010392|Ga0118731_106818496Not Available1559Open in IMG/M
3300010883|Ga0133547_10465845Not Available2563Open in IMG/M
3300010883|Ga0133547_11568986Not Available1231Open in IMG/M
3300013010|Ga0129327_10507263Not Available654Open in IMG/M
3300017748|Ga0181393_1015372All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.2281Open in IMG/M
3300020185|Ga0206131_10039652All Organisms → cellular organisms → Bacteria3353Open in IMG/M
3300020185|Ga0206131_10132379All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.1346Open in IMG/M
3300020187|Ga0206130_10061721Not Available2524Open in IMG/M
3300022053|Ga0212030_1037250All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.682Open in IMG/M
3300022053|Ga0212030_1069029Not Available504Open in IMG/M
3300022061|Ga0212023_1047431Not Available597Open in IMG/M
3300022061|Ga0212023_1053404Not Available561Open in IMG/M
3300022072|Ga0196889_1000331Not Available14842Open in IMG/M
3300022164|Ga0212022_1013822Not Available1163Open in IMG/M
3300022164|Ga0212022_1041752Not Available710Open in IMG/M
3300022164|Ga0212022_1063693Not Available568Open in IMG/M
(restricted) 3300024059|Ga0255040_10389637Not Available590Open in IMG/M
3300025276|Ga0208814_1000384Not Available29162Open in IMG/M
3300025543|Ga0208303_1004772Not Available4715Open in IMG/M
3300025543|Ga0208303_1058189Not Available915Open in IMG/M
3300025570|Ga0208660_1072893Not Available801Open in IMG/M
3300025590|Ga0209195_1095589Not Available663Open in IMG/M
3300025594|Ga0209094_1058003All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas → Xanthomonas oryzae978Open in IMG/M
3300025621|Ga0209504_1171103Not Available502Open in IMG/M
3300025626|Ga0209716_1001424Not Available18059Open in IMG/M
3300025626|Ga0209716_1002174Not Available13239Open in IMG/M
3300025637|Ga0209197_1015681All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.3212Open in IMG/M
3300025640|Ga0209198_1020332Not Available3037Open in IMG/M
3300025645|Ga0208643_1114780Not Available721Open in IMG/M
3300025645|Ga0208643_1116126All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.715Open in IMG/M
3300025647|Ga0208160_1102645Not Available740Open in IMG/M
3300025652|Ga0208134_1015437Not Available3004Open in IMG/M
3300025806|Ga0208545_1134486Not Available607Open in IMG/M
3300025806|Ga0208545_1135382Not Available604Open in IMG/M
3300025880|Ga0209534_10083399All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.1882Open in IMG/M
3300025881|Ga0209309_10117582All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.1401Open in IMG/M
3300025881|Ga0209309_10146603Not Available1202Open in IMG/M
3300025886|Ga0209632_10037004Not Available3272Open in IMG/M
3300027668|Ga0209482_1028731Not Available2270Open in IMG/M
3300027668|Ga0209482_1084924Not Available1050Open in IMG/M
3300027672|Ga0209383_1000442Not Available29709Open in IMG/M
(restricted) 3300027861|Ga0233415_10268136Not Available800Open in IMG/M
3300028125|Ga0256368_1060974Not Available654Open in IMG/M
3300031519|Ga0307488_10591893All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.645Open in IMG/M
3300031602|Ga0307993_1057889Not Available975Open in IMG/M
3300031658|Ga0307984_1167640Not Available608Open in IMG/M
3300033742|Ga0314858_095332Not Available753Open in IMG/M
3300033742|Ga0314858_149261Not Available600Open in IMG/M
3300034375|Ga0348336_087753Not Available1100Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine29.41%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous24.51%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine7.84%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine5.88%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine4.90%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient3.92%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine3.92%
Sea-Ice BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine2.94%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater2.94%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean1.96%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine1.96%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine1.96%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater1.96%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine0.98%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface0.98%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater0.98%
MarineEnvironmental → Aquatic → Marine → Coastal → Sediment → Marine0.98%
Sackhole BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine0.98%
Estuary WaterEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuary Water0.98%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000101Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010EnvironmentalOpen in IMG/M
3300000115Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011EnvironmentalOpen in IMG/M
3300000116Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010EnvironmentalOpen in IMG/M
3300001349Pelagic Microbial community sample from North Sea - COGITO 998_met_10EnvironmentalOpen in IMG/M
3300002930Estuary water microbial communities from Pearl Estuary, Zhujiang, ChinaEnvironmentalOpen in IMG/M
3300004097Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaGEnvironmentalOpen in IMG/M
3300004448Marine viral communities from Newfoundland, Canada BC-1EnvironmentalOpen in IMG/M
3300004460Marine viral communities from Newfoundland, Canada BC-1EnvironmentalOpen in IMG/M
3300005239Environmental Genome Shotgun Sequencing: Ocean Microbial Populations from the Gulf of MaineEnvironmentalOpen in IMG/M
3300006029Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNAEnvironmentalOpen in IMG/M
3300006190Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNAEnvironmentalOpen in IMG/M
3300006191Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG104-DNAEnvironmentalOpen in IMG/M
3300006920Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12EnvironmentalOpen in IMG/M
3300007276Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31EnvironmentalOpen in IMG/M
3300007538Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007540Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaGEnvironmentalOpen in IMG/M
3300008221Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_66EnvironmentalOpen in IMG/M
3300009071Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405EnvironmentalOpen in IMG/M
3300009074Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430EnvironmentalOpen in IMG/M
3300009076Pelagic marine microbial communities from North Sea - COGITO_mtgs_100511EnvironmentalOpen in IMG/M
3300009077Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328EnvironmentalOpen in IMG/M
3300009149Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaGEnvironmentalOpen in IMG/M
3300009193Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321EnvironmentalOpen in IMG/M
3300009420Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152EnvironmentalOpen in IMG/M
3300009434Pelagic marine microbial communities from North Sea - COGITO_mtgs_110516EnvironmentalOpen in IMG/M
3300009437Pelagic marine microbial communities from North Sea - COGITO_mtgs_110414EnvironmentalOpen in IMG/M
3300009445Pelagic marine microbial communities from North Sea - COGITO_mtgs_110331EnvironmentalOpen in IMG/M
3300009472Pelagic marine microbial communities from North Sea - COGITO_mtgs_110404EnvironmentalOpen in IMG/M
3300009495Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531EnvironmentalOpen in IMG/M
3300009496Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524EnvironmentalOpen in IMG/M
3300009505Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523EnvironmentalOpen in IMG/M
3300009512Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88EnvironmentalOpen in IMG/M
3300009526Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90EnvironmentalOpen in IMG/M
3300010316Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.8_DNAEnvironmentalOpen in IMG/M
3300010368Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNAEnvironmentalOpen in IMG/M
3300010392Coastal sediment microbial communities from Rhode Island, USA. Combined Assembly of Gp0121717, Gp0123912, Gp0123935, Gp0139423, Gp0139424, Gp0139388, Gp0139387, Gp0139386, Gp0139385EnvironmentalOpen in IMG/M
3300010883western Arctic Ocean co-assemblyEnvironmentalOpen in IMG/M
3300013010Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.8_DNAEnvironmentalOpen in IMG/M
3300017748Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 16 SPOT_SRF_2010-10-21EnvironmentalOpen in IMG/M
3300020185Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160517_1EnvironmentalOpen in IMG/M
3300020187Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160512_1EnvironmentalOpen in IMG/M
3300022053Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (v2)EnvironmentalOpen in IMG/M
3300022061Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v2)EnvironmentalOpen in IMG/M
3300022072Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v3)EnvironmentalOpen in IMG/M
3300022164Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v2)EnvironmentalOpen in IMG/M
3300024059 (restricted)Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_2EnvironmentalOpen in IMG/M
3300025276Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55 (SPAdes)EnvironmentalOpen in IMG/M
3300025543Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025570Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025590Pelagic marine microbial communities from North Sea - COGITO_mtgs_100420 (SPAdes)EnvironmentalOpen in IMG/M
3300025594Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430 (SPAdes)EnvironmentalOpen in IMG/M
3300025621Pelagic marine microbial communities from North Sea - COGITO_mtgs_100511 (SPAdes)EnvironmentalOpen in IMG/M
3300025626Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531 (SPAdes)EnvironmentalOpen in IMG/M
3300025637Pelagic marine microbial communities from North Sea - COGITO_mtgs_110512 (SPAdes)EnvironmentalOpen in IMG/M
3300025640Pelagic marine microbial communities from North Sea - COGITO_mtgs_110519 (SPAdes)EnvironmentalOpen in IMG/M
3300025645Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (SPAdes)EnvironmentalOpen in IMG/M
3300025647Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025652Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (SPAdes)EnvironmentalOpen in IMG/M
3300025806Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025880Pelagic Microbial community sample from North Sea - COGITO 998_met_07 (SPAdes)EnvironmentalOpen in IMG/M
3300025881Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412 (SPAdes)EnvironmentalOpen in IMG/M
3300025886Pelagic Microbial community sample from North Sea - COGITO 998_met_10 (SPAdes)EnvironmentalOpen in IMG/M
3300027668Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG104-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027672Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG029-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027861 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_12_MGEnvironmentalOpen in IMG/M
3300028125Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - SBEnvironmentalOpen in IMG/M
3300031519Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2EnvironmentalOpen in IMG/M
3300031602Marine microbial communities from Ellis Fjord, Antarctic Ocean - #260EnvironmentalOpen in IMG/M
3300031658Marine microbial communities from Ellis Fjord, Antarctic Ocean - #78EnvironmentalOpen in IMG/M
3300033742Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - 2018 seawaterEnvironmentalOpen in IMG/M
3300034375Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v4)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
DelMOSum2010_1002617523300000101MarineMEQKTPTRLNILYDKSTEPNRDRFSFAFSSDINDWIYSKQRRYDKKAYQIKAEKKSSL*
DelMOSum2010_1018321113300000101MarineMEQKTPTPLNILYDKKTEPNRDRFSFAFSSDINDWIYSXQRRYDKKAYRIKKKQQ
DelMOSum2010_1022481913300000101MarineMEQKTPTPLNILYDKSTEPNRDRFSFAFSSDINDWIYSKQRRYDKKAYRIKIEKKQQI*
DelMOSum2010_1022885733300000101MarineMEQKTPTPLNILYDKKTEPNRDRFSFAFSSDINDWIYSKQRRYDKKAYRIKKKQQI*
DelMOSum2011_1007518723300000115MarineMEQKTPTPLNILYDKSTEPNRDRFSFAFSSDINDWIYSXXRRYDKKAYQIKAEKKSSL*
DelMOSum2011_1008989913300000115MarineMEQKTPTPLNVLYDKPTEANRDRFCFAFSSDINDWIKSRQRRYDQKMNS
DelMOSpr2010_1000502583300000116MarineMEQKTPTPLNILYDKSTEPNRDRFSFAFSSDINDWIYSKQRRYDKKAYQIKAEKKSSL*
DelMOSpr2010_1022729923300000116MarineMEQKTPTPLNILYDKKTEPNRDRFSFAFSSNINDWIYSKQRRYDKKAYRIKKKQQI*
JGI20160J14292_1006958623300001349Pelagic MarineMEQKTPTPLNILYDKKTEPNRDRFCFAFSSDINDWIKSRQRRYDQKMNSIKAEKKSSL*
Water_10316333300002930Estuary WaterMEQKTPTPLNVLYDKPTEAGRDRFSFAFSSDINDWICSRRRKYDKKAYMIKAEKKRSI*
Ga0055584_10051756813300004097Pelagic MarineMEQKTPTRLNILYDKSTEPNRDRYSFAFSTDINDWITSRQRRYDKKHYKQKTK*
Ga0065861_102087413300004448MarineFFMEQKTPTPLNVLYDKPTEAGRDRFSFAFSSDIKDWICSRRRKYDKKAYMIKAAKKRSI
Ga0066222_100413173300004460MarineMEQKTPTPLNVLYDKPTEAGRDRFSFAFSSDIKDWICSRRRKYDKKAYMIKAAKKRSI*
Ga0073579_1170432303300005239MarineMEQKTPTPLNILYDKPTEPNRDRFSFAFSSDINDWIYSKQRRYDKKAYRIKIEKKQQI*
Ga0075466_102560533300006029AqueousMEQKTHTPLNVIYDKPTEAGRDRFSFAFSSDINDWICSRRRKYDKKAYMIKAEKKRSI*
Ga0075446_1010569933300006190MarineMEQKTPTPLNVLYEKSTDPSRDRFSFAFSTDIKDWIKSRQRRYDQKAYKIKKKE*
Ga0075447_1015720323300006191MarineMEQKTPTPLNVLYDKSTDSSRDRFSFAFSTDINDWINSKQRRYDKKAYMMKLEKKE*
Ga0070748_126077633300006920AqueousMQQKIPTPLNILYDKSTEPNRDRFSFAFSSDINDWIYSKQRRYDKKAYQIKAEKKSSL*
Ga0070748_126914113300006920AqueousMEQKTPTPLNILYDKKTEPNRDRFLFAFSSDINDWIYSKQRRYDKKAYRIKIEKKQQI*
Ga0070747_125178823300007276AqueousMEQKTPTPLNILYDKKTEPNRDRFSFAFSSDINDWIYSKQRRYDKKAY
Ga0099851_110156123300007538AqueousMEQKTPTPLNILYDKSTEPNRDRFSFAFSSDIKDWNYSKQRRYDKKAYQIKAEKKSSL*
Ga0099847_108588433300007540AqueousMEQKTPTPLNILYDKSTEPNRDRFSFAFSSDINDWIYSKQRRYDQKMNSIKAEKKSSL*
Ga0099847_115419023300007540AqueousMEQKTPTRLNILYDKSTEPSRDRFSFAFSSNINDWIYSRQRRYDKKAYRIKIEKKQQI*
Ga0114916_103412513300008221Deep OceanMEQKTPTPLNVLYDKSTDPRRDRFSFAFSTNIKDWIKSRQRRYDQKAYKIKKKE*
Ga0115566_1036876233300009071Pelagic MarineMEQKTPTPLNILYDKPTEANRDRFCFAFSSDINDWIKSRQRRYDQKMNSIKAEKKSSL*
Ga0115549_102690633300009074Pelagic MarineMQQKIPTPLNILYDKSTEPNRDRFSFAFSTDIKDWIYSKQRRYDKKAYEMKIKKKE*
Ga0115550_104924923300009076Pelagic MarineMQQKIPTPLNILYDKSTEPNRDRFSFAFSTDINDWIYSKQRRYDKKAYEMKIKKKE*
Ga0115550_114384623300009076Pelagic MarineMEQKTPTRLNILYDKSTEPSRDRFSFAFSSDINDWIYSKQRRYDKKAYRIKKKQQI*
Ga0115550_117891823300009076Pelagic MarineMEQKTPTPLNILYDKPTETNRDRFCFAFSSDINDWIKSRQRRYDQKMNSIKAEKKSSL*
Ga0115552_131435223300009077Pelagic MarineMEQKTPTPLNILYDKKTEPNRDRFSFAFSSDINDWIYSKQRRYDKKAYQIKAEKKSSL*
Ga0114918_1019932423300009149Deep SubsurfaceMEQKTPTPLNILYDKPTEPNRDRFSFAFSSDINDWIYSKQRRYDKKAYQIKAEKKSSL*
Ga0115551_133469433300009193Pelagic MarineKPTEPNRDRFSFAFSSDINDWIYSKQRRYDKKAYRIKIEKKQQI*
Ga0114994_1018933223300009420MarineMEQKTPTRLNILYDKSTEPSRDRFSFAFSSNINDWIYSRQRRYDKKAYRIKIEKKQ*
Ga0114994_1081616913300009420MarineQKIPTKLNILYDKSTEPNRDRYSFAFSTDINDWITSRQRRYDKINYKNKTK*
Ga0115562_117697833300009434Pelagic MarineMEQKTPTPLNVLYDKKTEPSRDRFSFAFSSDMNDWIMSRQRRYDKIANKIKAEKKRSI*
Ga0115556_121262723300009437Pelagic MarineMEQKTPTPLNILYDKPTEANRDRFCFAFSSDINDWIKSRQRRYDQKMNSIK
Ga0115556_123852313300009437Pelagic MarineMEQKTPTPLNILYDKSTEPNRDRFSFAFSSDINDWIYSKQRRCDKKAYQIKAEKKSSL*
Ga0115553_119114013300009445Pelagic MarineMEQKTPTPLNILYDKSTEPNRDRFCFAFSSDINDWIKSRQRRYDQKMNSIKAEKKSSL*
Ga0115553_128042323300009445Pelagic MarineMEQKTPTPLNILYDKSTEPNRDRFSFAFSSDINDWIYSKQRRYDKKA*
Ga0115554_142943323300009472Pelagic MarineMEQKTPTPLNILYDKKTEPNRDRFSFAFSSDINDWIYSKQRRYDKKAYQIKAEK
Ga0115571_108465533300009495Pelagic MarineMQQKIPTPLNVIYEKSDDPQRDRFSFAFSTDIKDWICSKRRRYDKKAYEMKIKKKE*
Ga0115571_114648923300009495Pelagic MarineMEQKTPTPLNVLYDKKTEPSRDRFSFAFSSDVNDWIMSRQRRYDKIANKIKAEKKRSI*
Ga0115571_120463413300009495Pelagic MarineMEQKTLTPLNVLYDKPTEAGRDRFSFAFSSDIKDWICSRRRKYDKKAY
Ga0115571_128535933300009495Pelagic MarineMEQKKPTLLNVLYDKPTEAGRDRFSFAFSSDINDWICSRRRKYDKKAYMIKAEKKRSI*
Ga0115571_133004913300009495Pelagic MarineMEQKTPTLLNVLYDKPTEAGRDRFSFAFSSDIKDWICSRRRKYDKKAY
Ga0115570_1019243923300009496Pelagic MarineMEQKTLTPLNVLYDKPTEAGRDRFSFAFSSDIKDWICSRRRKYDKKAYMIKAAKKRSI*
Ga0115570_1049072623300009496Pelagic MarineMEQKTPTPLNVLYDKKTEPSRDRFSFAFSSDMNDWIMSRQRRYDKIANKIKAGKKRSI*
Ga0115564_1041763723300009505Pelagic MarineMEQKTPTLLNVLYDKPTEAGRDRFSFAFSSDIKDWICSRRRKYDKKAYMIKAAKKRSI*
Ga0115003_1081843613300009512MarineKTPTRLNILYDKSTEPSRDRFSFAFSSNINDWIYSKQRRYDKKAYRIKIEKKQ*
Ga0115004_1037020523300009526MarineMEQKTPTRLNILYDKSTEPSRDRFSFAFSSNINDWIYSKQRRYDKKAYRIKKKQ*
Ga0136655_101258013300010316Freshwater To Marine Saline GradientMEQKTPTPLNILYDKKTEPNRDRFSFAFSSDINDWIYSKQRRYDKKAYRIKIEKKQQI*
Ga0129324_1032459413300010368Freshwater To Marine Saline GradientMEQKTPTPLNILYDKPTEPNRDRFSFAFSSDINDWIYSKQRRYDKKAY
Ga0129324_1042041013300010368Freshwater To Marine Saline GradientMEQKTPTRLNILYDKSTEPNRDRFSFAFSSDIKDWIYSKQRRYDKKAYQIKAEKKSSL*
Ga0118731_10681849633300010392MarineMEQKTPTPLNILYDKPTEPNRDRFSFAFSSDINDWIYSKQRRYDKKAYRIKKKQQI*
Ga0133547_1046584513300010883MarineMEQKTPTRLNILYDKSTEPNRDRYSFAFSTDINDWITSRQRRYDKINYKNKTK*
Ga0133547_1156898613300010883MarineMEQKTPTRLNILYDKSTEPSRDRFSFAFSSNINDWIYSKQRRYDKKAYRIKIEKKQ*
Ga0129327_1050726323300013010Freshwater To Marine Saline GradientMEQKTPTPLNILYDKSTEPNRDRFSFAFSSDINDWIYSKQRRYDKKAYRIKKKQQI*
Ga0181393_101537253300017748SeawaterMEQKTPTPLNVLYDKPTEVGRDRFSFAFSSDINDWICSRRRKYDKKAYMIKAEKKRSI
Ga0206131_1003965243300020185SeawaterMEQKTPTPLNILYDKPTEANRDRFCFAFSSDINDWIKSRQRRYDQKMNSIKAEKKSSL
Ga0206131_1013237923300020185SeawaterMEQKTPTPLNILYDKPTEPNRDRFSFAFSSDINDWIYSKQRRYDKKAYRIKIEKKQQI
Ga0206130_1006172163300020187SeawaterMEQKKPTLLNVLYDKPTEAGRDRFSFAFSSDINDWICSRRRKYDKKAYMIKAEKKRSI
Ga0212030_103725013300022053AqueousMEQKTPTPLNILYDKSTEPNRDRFSFAFSSDINDWIYSRQRRYDKKAYRIKIEN
Ga0212030_106902923300022053AqueousMEQKTPTPLNILYDKKTEPNRDRFSFAFSSDINDWIYSKQRRYDKKAYRIKIEKKP
Ga0212023_104743123300022061AqueousMEQKTPTRLNILYDKSTEPNRDRFSFAFSSDINDWIYSKQRRYDKKAYQIKAEKKSSF
Ga0212023_105340413300022061AqueousMEQKTHTPLNVIYDKPTEAGRDRFSFAFSSDINDWICSRRRKYDKKAYMIKAEKKRSI
Ga0196889_1000331103300022072AqueousMEQKTPTRLNILYDKSTEPNRDRFSFAFSSDINDWIYSKQRRYDKKAYQIKAEKKSSL
Ga0212022_101382213300022164AqueousMEQKTPTPLNILYDKKTEPNRDRFSFAFSSDINDWIYSKQRRYDKKAYRIKIEKKQQI
Ga0212022_104175233300022164AqueousMEQKTPTRLNILYDKSTEPNRDRFSFAFSSDINDWIYSKQRRYDKKAYQ
Ga0212022_106369313300022164AqueousMQQKIPTPLNILYDKSTEPNRDRFSFAFSSDINDWIYSKQRRYDKKAYQIKAEKKSSL
(restricted) Ga0255040_1038963713300024059SeawaterMEQKTPTPLNVLYDKPTEVGRDRFSFAFSSDIKDWICSRRRKYDQKAYMIKAEKKRSI
Ga0208814_1000384533300025276Deep OceanMEQKTPTPLNVLYDKSTDPRRDRFSFAFSTNIKDWIKSRQRRYDQKAYKIK
Ga0208303_100477293300025543AqueousMEQKTPTPLNILYDKSTEPNRDRFSFAFSSDINDWIYSRQRRYDKKAYRIKIEKKQQI
Ga0208303_105818923300025543AqueousMEQKTPTPLNILYDKSTEPNRDRFSFAFSSDINDWIYSKQRRYDQKMNSIKAEKKSSL
Ga0208660_107289333300025570AqueousMEQKTPTPLNILYDKSTEPNRDRFSFAFSSDINDWIYSKQRRYDKKAYQIKAEKKS
Ga0209195_109558923300025590Pelagic MarineMQQKIPTPLNILYDKSTEPNRDRFSFAFSTDINDWIYSKQRRYDKKAYEMKIKKKE
Ga0209094_105800333300025594Pelagic MarineMQQKIPTPLNILYDKSTEPNRDRFSFAFSTDIKDWIYSKQRRYDKKAYEMKIKKKE
Ga0209504_117110323300025621Pelagic MarineMEQKTPTPLNILYDKPTETNRDRFCFAFSSDINDWIKSRQRRYDQKMNSIKAEKKSSL
Ga0209716_100142483300025626Pelagic MarineMQQKIPTPLNVIYEKSDDPQRDRFSFAFSTDIKDWICSKRRRYDKKAYEMKIKKKE
Ga0209716_100217433300025626Pelagic MarineMEQKTLTPLNVLYDKPTEAGRDRFSFAFSSDIKDWICSRRRKYDKKAYMIKAAKKRSI
Ga0209197_101568123300025637Pelagic MarineMEQKTPTPLNILYDKKTEPNRDRFSFAFSSDINDWIYSKQRRYDKKAYRIKKKATNLILK
Ga0209198_102033213300025640Pelagic MarineEQKTPTPLNILYDKPTEANRDRFCFAFSSDINDWIKSRQRRYDQKMNSIKAEKKSSL
Ga0208643_111478023300025645AqueousMEQKTPTPLNILYDKKTEPNRDRFLFAFSSDINDWIYSKQRRYDKKAYRIKIEKKQQI
Ga0208643_111612613300025645AqueousMEQKTPTPLNILYDKSTEPNRDRFSFAFSSDINDWIYSKQRRYDKKAYRIKIEKKQQI
Ga0208160_110264533300025647AqueousMEQKTPTPLNILYDKKTEPNRDRFSFAFSSDINDWIYSKQRRYDKKAYQIKAEKKSSL
Ga0208134_101543723300025652AqueousMEQKTPTPLNILYDKSTEPNRDRFSFAFSSDINDWIYSKQRRYDKKAYQIKAEKKSSL
Ga0208545_113448623300025806AqueousMQQKIPTPLNILYDKSTEPNRDRFSFAFSSDINDWIYSKQRRYDKKAYQIKAEKKSS
Ga0208545_113538233300025806AqueousMEQKTPTPLNILYDKPTEPNRDRFSFAFSSDINDWIYSKQRRYDKKAYQIKAEKK
Ga0209534_1008339913300025880Pelagic MarineMEQKTPTPLNILYDKKTEPNRDRFSFAFSSNINDWIYSKQRRYDKKAYRIKKKQQI
Ga0209309_1011758243300025881Pelagic MarineMEQKTPTPLNILYDKPTEANRDRFCFAFSSDINDWIKSRQRRYDQKMNSIKA
Ga0209309_1014660313300025881Pelagic MarinePTPLNILYDKPTEANRDRFCFAFSSDINDWIKSRQRRYDQKMNSIKAEKKSSL
Ga0209632_10037004103300025886Pelagic MarineILYDKPTEANRDRFCFAFSSDINDWIKSRQRRYDQKMNSIKAEKKSSL
Ga0209482_102873113300027668MarinePPFFMEQKTPTPLNVLYEKSTDPSRDRFSFAFSTDIKDWIKSRQRRYDQKAYKIKKKE
Ga0209482_108492423300027668MarineMEQKTPTPLNVLYDKSTDSSRDRFSFAFSTDINDWINSKQRRYDKKAYMMKLEKKE
Ga0209383_1000442363300027672MarineMEQKTPTPLNVLYEKSTDPSRDRFSFAFSTDIKDWIKSRQRRYDQKAYKIKKKE
(restricted) Ga0233415_1026813623300027861SeawaterMEQKTPTPLNVLYDKPTEAGRDRFSFAFSSDINDWICSRRRKYDKKAYMIKAEKKRSI
Ga0256368_106097413300028125Sea-Ice BrineMEQKTPTRLNILYDKSTEPNRDRYSFAFSSDINDWIYSRQRRYDKKAYRIK
Ga0307488_1059189323300031519Sackhole BrineMEQKTPTPLNILYDKSTEPNRDRFSFAFSSNINDWIYSKQRRYDKKAYRIKIEKKQQ
Ga0307993_105788913300031602MarineNFKYVIQWGVKPPFFMEQKTPTPLNVLYDKSTDPRRDRFSFAFSTNIKDWIKSRQRRYDQKAYKIKKKE
Ga0307984_116764023300031658MarineMEQKTPTPLNVLYDKSTDPSRDRFSFAFSTDIKDWIKSRQRRYDQKAYKIKKKE
Ga0314858_095332_458_6283300033742Sea-Ice BrineMEQKTPTRLNILYDKSTEPNRDRFSFAFSSDINDWINSKQRRYDKKAYRMKVEKKE
Ga0314858_149261_13_1833300033742Sea-Ice BrineMEQKTPTRLNILYDKSTEPNRDRYSFAFSSDINDWIYSRQRRYDKKAYRIKIEKKQ
Ga0348336_087753_608_7783300034375AqueousMEQKTPTPLNILYDKKTEPNRDRFSFAFSSDINDWIYSKQRRYDKKAYRIKKKQQI


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