Metagenome Family F101463

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F101463
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	66 residues
Representative Sequence	MTSESTPLPTLDQLRALARVQGVEPTDADLEGVLGFLRTVLPALRELEEGTGRDVPPAGMYLPDPEAT
Number of Associated Samples	78
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.96 %
% of genes near scaffold ends (potentially truncated)	25.49 %
% of genes from short scaffolds (< 2000 bps)	89.22 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.078 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil (20.588 % of family members)
Environment Ontology (ENVO)	Unclassified (24.510 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (33.333 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 36.46% β-sheet: 0.00% Coil/Unstructured: 63.54%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.57
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.57
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF09723	Zn-ribbon_8	40.20
PF01425	Amidase	39.22
PF00561	Abhydrolase_1	9.80
PF12697	Abhydrolase_6	1.96
PF00857	Isochorismatase	0.98
PF11752	DUF3309	0.98
PF13426	PAS_9	0.98
PF01979	Amidohydro_1	0.98
PF00892	EamA	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	39.22
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.98
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.08 %
Unclassified	root	N/A	3.92 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.08 %
Unclassified	root	N/A	3.92 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.08 %
Unclassified	root	N/A	3.92 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	55.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.92 %
Unclassified	root	N/A	3.92 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	55.88 %
Unclassified	root	N/A	3.92 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	45.10 %
Unclassified	root	N/A	3.92 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	44.12 %
Unclassified	root	N/A	3.92 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	44.12 %
Unclassified	root	N/A	3.92 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000363\|ICChiseqgaiiFebDRAFT_11257296	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	704	Open in IMG/M
3300000953\|JGI11615J12901_11086489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	525	Open in IMG/M
3300000956\|JGI10216J12902_107494798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	846	Open in IMG/M
3300000956\|JGI10216J12902_109228644	All Organisms → cellular organisms → Bacteria → Proteobacteria	616	Open in IMG/M
3300000956\|JGI10216J12902_115892266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	601	Open in IMG/M
3300003267\|soilL1_10150672	All Organisms → cellular organisms → Bacteria	1074	Open in IMG/M
3300003987\|Ga0055471_10054798	All Organisms → cellular organisms → Bacteria	1088	Open in IMG/M
3300003987\|Ga0055471_10075764	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300003987\|Ga0055471_10126910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	765	Open in IMG/M
3300003993\|Ga0055468_10193666	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300003996\|Ga0055467_10022654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1425	Open in IMG/M
3300003997\|Ga0055466_10163644	All Organisms → cellular organisms → Bacteria → Proteobacteria	642	Open in IMG/M
3300003998\|Ga0055472_10129563	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300003998\|Ga0055472_10160093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	673	Open in IMG/M
3300004013\|Ga0055465_10227326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	622	Open in IMG/M
3300004114\|Ga0062593_101685586	All Organisms → cellular organisms → Bacteria → Proteobacteria	692	Open in IMG/M
3300004463\|Ga0063356_106409682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	504	Open in IMG/M
3300004480\|Ga0062592_101433277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	659	Open in IMG/M
3300005093\|Ga0062594_100645706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	940	Open in IMG/M
3300005093\|Ga0062594_102572302	Not Available	560	Open in IMG/M
3300005327\|Ga0070658_10760687	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	841	Open in IMG/M
3300005937\|Ga0081455_10033553	All Organisms → cellular organisms → Bacteria	4610	Open in IMG/M
3300006196\|Ga0075422_10147471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	938	Open in IMG/M
3300006844\|Ga0075428_101344401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	751	Open in IMG/M
3300006876\|Ga0079217_10160577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1101	Open in IMG/M
3300006904\|Ga0075424_101149437	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	827	Open in IMG/M
3300009094\|Ga0111539_10301597	All Organisms → cellular organisms → Bacteria	1864	Open in IMG/M
3300009094\|Ga0111539_12622930	Not Available	584	Open in IMG/M
3300009098\|Ga0105245_10851688	All Organisms → cellular organisms → Bacteria	952	Open in IMG/M
3300009147\|Ga0114129_10278197	All Organisms → cellular organisms → Bacteria	2237	Open in IMG/M
3300009147\|Ga0114129_11339445	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
3300009156\|Ga0111538_11876860	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300009545\|Ga0105237_10488520	All Organisms → cellular organisms → Bacteria	1237	Open in IMG/M
3300011440\|Ga0137433_1174307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	698	Open in IMG/M
3300012043\|Ga0136631_10072706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1295	Open in IMG/M
3300012092\|Ga0136621_1006573	All Organisms → cellular organisms → Bacteria	4813	Open in IMG/M
3300012093\|Ga0136632_10023255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2771	Open in IMG/M
3300012684\|Ga0136614_10620771	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300014254\|Ga0075312_1103250	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	595	Open in IMG/M
3300014267\|Ga0075313_1093603	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300014270\|Ga0075325_1054761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	854	Open in IMG/M
3300014271\|Ga0075326_1036467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1271	Open in IMG/M
3300014272\|Ga0075327_1133022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	767	Open in IMG/M
3300014326\|Ga0157380_11809995	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300015200\|Ga0173480_11260240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	502	Open in IMG/M
3300015372\|Ga0132256_102361920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	635	Open in IMG/M
3300017787\|Ga0183260_10011200	All Organisms → cellular organisms → Bacteria	6922	Open in IMG/M
3300017787\|Ga0183260_10015615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5826	Open in IMG/M
3300017789\|Ga0136617_10703299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	784	Open in IMG/M
3300017789\|Ga0136617_11430106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	516	Open in IMG/M
3300017965\|Ga0190266_10018401	All Organisms → cellular organisms → Bacteria	1989	Open in IMG/M
3300017965\|Ga0190266_10050496	All Organisms → cellular organisms → Bacteria	1467	Open in IMG/M
3300017965\|Ga0190266_10113653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1142	Open in IMG/M
3300018432\|Ga0190275_10025900	All Organisms → cellular organisms → Bacteria	4630	Open in IMG/M
3300018466\|Ga0190268_10073083	All Organisms → cellular organisms → Bacteria	1476	Open in IMG/M
3300018466\|Ga0190268_10117338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1280	Open in IMG/M
3300018469\|Ga0190270_10099370	All Organisms → cellular organisms → Bacteria	2224	Open in IMG/M
3300018469\|Ga0190270_10300170	All Organisms → cellular organisms → Bacteria	1430	Open in IMG/M
3300018476\|Ga0190274_11084491	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300018481\|Ga0190271_10363787	All Organisms → cellular organisms → Bacteria	1531	Open in IMG/M
3300018481\|Ga0190271_10679548	All Organisms → cellular organisms → Bacteria	1152	Open in IMG/M
3300018481\|Ga0190271_10758448	All Organisms → cellular organisms → Bacteria	1094	Open in IMG/M
3300018481\|Ga0190271_10812592	All Organisms → cellular organisms → Bacteria	1059	Open in IMG/M
3300018481\|Ga0190271_12220530	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	655	Open in IMG/M
3300018481\|Ga0190271_12627077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	604	Open in IMG/M
3300019356\|Ga0173481_10001210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6132	Open in IMG/M
3300022915\|Ga0247790_10101470	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300023057\|Ga0247797_1051822	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	591	Open in IMG/M
3300023102\|Ga0247754_1123723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	634	Open in IMG/M
3300025567\|Ga0210076_1011334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1912	Open in IMG/M
3300025796\|Ga0210113_1031115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1088	Open in IMG/M
3300025937\|Ga0207669_10056472	All Organisms → cellular organisms → Bacteria	2384	Open in IMG/M
3300026035\|Ga0207703_12221142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	525	Open in IMG/M
3300026071\|Ga0208537_1010964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1185	Open in IMG/M
3300026075\|Ga0207708_10459068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1062	Open in IMG/M
3300027907\|Ga0207428_10134903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1887	Open in IMG/M
3300028587\|Ga0247828_10610500	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300028587\|Ga0247828_10839753	Not Available	586	Open in IMG/M
3300028589\|Ga0247818_10429213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	894	Open in IMG/M
3300028589\|Ga0247818_11311056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	520	Open in IMG/M
3300028589\|Ga0247818_11425249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	500	Open in IMG/M
3300028590\|Ga0247823_11522784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	502	Open in IMG/M
3300028592\|Ga0247822_11134975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	650	Open in IMG/M
3300028596\|Ga0247821_10259636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1046	Open in IMG/M
3300028597\|Ga0247820_10412530	Not Available	906	Open in IMG/M
3300028812\|Ga0247825_10160811	All Organisms → cellular organisms → Bacteria	1543	Open in IMG/M
3300030336\|Ga0247826_11055966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	647	Open in IMG/M
3300031547\|Ga0310887_10488856	All Organisms → cellular organisms → Bacteria	739	Open in IMG/M
3300031547\|Ga0310887_10509891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	726	Open in IMG/M
3300031562\|Ga0310886_10298202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	920	Open in IMG/M
3300031716\|Ga0310813_10751126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	875	Open in IMG/M
3300031858\|Ga0310892_10045874	All Organisms → cellular organisms → Bacteria	2136	Open in IMG/M
3300031858\|Ga0310892_10642898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	722	Open in IMG/M
3300031908\|Ga0310900_11533098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	563	Open in IMG/M
3300031944\|Ga0310884_10408242	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300031995\|Ga0307409_101539231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	693	Open in IMG/M
3300032002\|Ga0307416_100705812	All Organisms → cellular organisms → Bacteria	1098	Open in IMG/M
3300032013\|Ga0310906_10301994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1022	Open in IMG/M
3300032122\|Ga0310895_10127971	All Organisms → cellular organisms → Bacteria	1071	Open in IMG/M
3300032174\|Ga0307470_10909156	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	692	Open in IMG/M
3300033551\|Ga0247830_11113773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	630	Open in IMG/M
3300034150\|Ga0364933_042447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1119	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	80.39%
Host-Associated	Host-Associated	19.61%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	60.78%
Aquatic	Environmental → Aquatic	19.61%
Plants	Host-Associated → Plants	19.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	59.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.67%
Marine	Environmental → Aquatic → Marine	10.78%
Freshwater	Environmental → Aquatic → Freshwater	7.84%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.94%
Sediment	Environmental → Aquatic → Sediment	0.98%
Floodplain	Environmental → Terrestrial → Floodplain	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.73%
Wetlands	Environmental → Aquatic → Marine → Wetlands	10.78%
Ice	Environmental → Aquatic → Freshwater → Ice	7.84%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.88%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.94%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.98%
Loam	Environmental → Terrestrial → Soil → Loam	0.98%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.98%

Habitat	Taxonomy	Distribution
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	20.59%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.73%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	10.78%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.82%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	7.84%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.88%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.98%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.98%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	20.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	17.65%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	10.78%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.82%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	7.84%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	5.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.96%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.98%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.98%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.98%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.98%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.98%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.98%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300003993	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2	Environmental	Open in IMG/M
3300003996	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2	Environmental	Open in IMG/M
3300003997	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1	Environmental	Open in IMG/M
3300003998	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2	Environmental	Open in IMG/M
3300004013	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300011440	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT840_2	Environmental	Open in IMG/M
3300012043	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ601 (22.06)	Environmental	Open in IMG/M
3300012092	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ445A (23.06)	Environmental	Open in IMG/M
3300012093	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ611 (21.06)	Environmental	Open in IMG/M
3300012684	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)	Environmental	Open in IMG/M
3300014254	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailB_D2	Environmental	Open in IMG/M
3300014267	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D1	Environmental	Open in IMG/M
3300014270	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D1	Environmental	Open in IMG/M
3300014271	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D2	Environmental	Open in IMG/M
3300014272	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailB_D1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017787	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ497 (22.06) (version 2)	Environmental	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300022915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S171-409R-4	Environmental	Open in IMG/M
3300023057	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S136-409B-6	Environmental	Open in IMG/M
3300023102	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S184-509B-5	Environmental	Open in IMG/M
3300025567	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025796	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026071	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_TuleA_D1 (SPAdes)	Environmental	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028590	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day30	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034150	Sediment microbial communities from East River floodplain, Colorado, United States - 25_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiFebDRAFT_112572962	3300000363	Soil	MTNDSTSLPSLAELRALARVQGVEPSDADLEGVLGFLRTVLPALQELEEATGRDVPPAGMYLPDPEAA*
JGI11615J12901_110864893	3300000953	Soil	MEPESSLVPSLDELRALARAQGVEPTDADLEGVLGFLRTVLPSLRELEEATQRDVPPAGMYLP
JGI10216J12902_1074947982	3300000956	Soil	MTHESTQLPTVEELRALARVQGVEPTDADLEGVLGFLRTVLPALRELEQGTGREVPPAGMYLPDPEAT*
JGI10216J12902_1092286442	3300000956	Soil	MSSDSTPLPSVAELRALARVQGVEPTDDDLEGVLGFLGTVLPTLRALEEQTGRDIPPAGMYHPDPDAT*
JGI10216J12902_1158922661	3300000956	Soil	LPTLDELRALARVQGVEPTESDLEGVLGFLRTVLPALRELEEGTSRDVPPAGMYLPDPEAT*
soilL1_101506721	3300003267	Sugarcane Root And Bulk Soil	MEAESSPVPSLEELRALARAQGVEPSDADLEGVLGFLRTVLPSLRELEEATPRDVPPAGLYLPDPEAT*
Ga0055471_100547983	3300003987	Natural And Restored Wetlands	MGMEPESSLVPSLDELRALARAQGVEPTDADLEGVLGFLRTVLPSLRELEEATQRDVPPAGLYLPDPEAA*
Ga0055471_100757641	3300003987	Natural And Restored Wetlands	MESESSPVLSLEELRALARVHGVEPTDADLEGVLGFLRTVLPDLRELEEATGRDVPPAGLYLPDPEAT*
Ga0055471_101269102	3300003987	Natural And Restored Wetlands	MAAESTPLPSLEELRALARAQGVDPSDADLEGVLGFLRTVLPALRELEEQTGREIPPAGLYLPDPEAA*
Ga0055468_101936662	3300003993	Natural And Restored Wetlands	LDELRALARAQGVEPTDADLEGVLGFLRTVLPSLRELEEATQRDVPPAGLYLPDPEAA*
Ga0055467_100226542	3300003996	Natural And Restored Wetlands	MAAEFTPLPSLDELRALARAQGVDPSDADLEGVLGFLRTVLPALRELEEGTGRDVPPAGMYLPDPEAT*
Ga0055466_101636442	3300003997	Natural And Restored Wetlands	MADESTPVPSLDELRALARAQGVEPTDADLEGVLGFLRTVLPALRELEEGTGRDVPPAGLYLPDPEAT*
Ga0055472_101295632	3300003998	Natural And Restored Wetlands	MAAESTPLPSLDELRALARAQGVDPSDADLEGVLGFLRTVLPALRELEEGTGRDVPPAGMYLPDPEAT*
Ga0055472_101600932	3300003998	Natural And Restored Wetlands	MESKSSPVPSLEELRALARVHGVEPTDADLEGVLGFLRTVLPDLRELEEATGRDVPPAGLYLPDPEAT*
Ga0055465_102273263	3300004013	Natural And Restored Wetlands	MADESTPVPSLDELRALARAQGVEPTDADLEGVLGFLRTVLPALRELEEGTGRDVPPAGLYLPDPEA
Ga0062593_1016855862	3300004114	Soil	MEPESSLVPSLDELRALARAQGVEPTDADLEGVLGFLRTVLPSLRELEEATQRDVPPAGMYLPDPEAT*
Ga0063356_1064096822	3300004463	Arabidopsis Thaliana Rhizosphere	MTGDSTPLPTLDELRALARVQGVEPTDADLEGVLGFLATVLPALRELEERTGRDVPPAGLYLPPEAT*
Ga0062592_1014332771	3300004480	Soil	MTSEFTPLPTLDQLRALARVQGVEPTDADLEGVLGFLRTVLPALRELEEGTGRDVPPAGMYLPDLEAT*
Ga0062594_1006457062	3300005093	Soil	MANESTQLPSLEELRALARVQGVEPTDADLEGVLGFLRTVLPALRELEQGTGREIPPAGMYLPDPEAT*
Ga0062594_1025723022	3300005093	Soil	IGMTNDSTSLPSLAELRALARVQGVEPSDADLEGVLGFLRTVLPALQELEEATGRDVPPAGMYLPDPEAA*
Ga0070658_107606872	3300005327	Corn Rhizosphere	DELRALARAQGVEPTDADLEGVLGFLRTVLPSLRELEEATQRDVPPAGMYLPDPEAT*
Ga0081455_100335535	3300005937	Tabebuia Heterophylla Rhizosphere	MEPQSSPVPSLEELRALARAQGVEPTDADLEGVLGFLRTVLPALHELEEATGRDVPPAGLYLPDPEAT*
Ga0075422_101474711	3300006196	Populus Rhizosphere	SLVPSLDELRALARAQGVEPTDADLEGVLGFLRTVLPSLRELEEATQRDVPPAGMYLPDPEAT*
Ga0075428_1013444012	3300006844	Populus Rhizosphere	MGAESTPLPSLEELRALARAQGVDPTDADLEGVLGFLGIVLPALRELEGETGRDVPPAGMYLPDREAT*
Ga0079217_101605773	3300006876	Agricultural Soil	MTDESSPLPTLPELRALARVQGVEPTDADLEGVLGFLRTVLPALRELEEGTGRDVPPAGMYLPDPEAS*
Ga0075424_1011494372	3300006904	Populus Rhizosphere	MEPESSLVPSLDELRALARAQGVEPTDVDLEGVLGFLRTVLPSLRELEEATQRDVPPAGMYLPDPEAT*
Ga0111539_103015973	3300009094	Populus Rhizosphere	MNGDSTPLPTLDELRALARVQGVEPTDADLEGVLGFLATVLPALRELEERTGRDVPPAGLYLPPEAT*
Ga0111539_126229301	3300009094	Populus Rhizosphere	MTNESTQLPTVEELRALARVQGVEPTDTDLEGVLGFLRTVLPALRELEQGTGREIPPAGMYLPDPEAT*
Ga0105245_108516882	3300009098	Miscanthus Rhizosphere	MTNDSTSLPSLAELRALARVRGVAPADADREGVLGFLGTVLPALQELEEATGRDVPPAGMYLPDPEAA*
Ga0114129_102781974	3300009147	Populus Rhizosphere	MGAESTPLPSLEELRALARAQGVDPTDADLEGVLGFLGNVLPALRELEGETGRDVPPAGMYLPDREAT*
Ga0114129_113394453	3300009147	Populus Rhizosphere	MEAESSPVPSLEELRALARAQGVEPSDADLEGVLGFLGTVLPSLRELEEATPRDVPPA
Ga0111538_118768602	3300009156	Populus Rhizosphere	MTGDSTPLPTLDELRALARVQGVEPTDADLEAVLGFLATVLPALRELEERTGRDVPPAGLYLPTEAT*
Ga0105237_104885203	3300009545	Corn Rhizosphere	MEPESSLVPSLDELRALARAQGVEPTDADLEGGLGFLRTVLPSLRELEEATQRDVPPAGMYLPDPEAT*
Ga0137433_11743073	3300011440	Soil	MTSESTPLPTLDQLRALARVQGVEPTDTDLEGVLGFLATVLPALRELEERTGRDVAPAGMYLPDPEAT*
Ga0136631_100727062	3300012043	Polar Desert Sand	MSADSTPLPALAELRALAWLQGVEPTDGDLEGVLGFLATVLPALRALEEQTGRDIPPAGLYLPDPEAT*
Ga0136621_10065734	3300012092	Polar Desert Sand	MSADSIPLPALAELRALARLQGVEPTDTDLEGVLGFLATVLPALRALEEQTGRDIPPAGLYLPDPEAT*
Ga0136632_100232555	3300012093	Polar Desert Sand	MSADSTPLPALAELRALARLQGVEPTDTDLEGVLGFLATVLPALRALEEQTGRDIPPAGLYLPDPEAT*
Ga0136614_106207712	3300012684	Polar Desert Sand	MGADSIPLPTLAELRGQARRQGVDPTDADLEAVLGFLATVLPPLQELEEATGREVPPAGMYLPDAESP*
Ga0075312_11032502	3300014254	Natural And Restored Wetlands	MESKSSPVPSLEELRALARVHGVEPTDADLEGVLGFLRTVLPALRELEEGTGRDVPPAGLYLPDPEAT*
Ga0075313_10936032	3300014267	Natural And Restored Wetlands	MAAESTPLPSLDELRALARAQGVDPSDADLEGVLGFLRTVLPALRELEEGTGRDVPPAGLYLPDPEAT*
Ga0075325_10547612	3300014270	Natural And Restored Wetlands	MAAEFTPLPSLDELRALARAQGVEPTDADLEGVLGFLRTVLPALRELEEGTGRDVPPAGLYLPDPEAT*
Ga0075326_10364672	3300014271	Natural And Restored Wetlands	MTSESTPLPDVDELRALARAQGVDPSDADLEGVLGFLRTVLPALRELEEGTGRDVPPAGMYLPDPEAT*
Ga0075327_11330222	3300014272	Natural And Restored Wetlands	MESKSSPVPSLEELRALARVHGVEPTDADLEGVLGFLRTVLPSLRVLEETTGRDVPPAGLYLPDPEAT*
Ga0157380_118099952	3300014326	Switchgrass Rhizosphere	MTGDSTPLPTLDELRALARVQGVEPTDADLEGVLGFLATVLPALRELEERTGRDVPPAGLYLPTEAT*
Ga0173480_112602403	3300015200	Soil	MTNDSTSLPSLAELRALARVQGVEPSDADLEGVLGFLRTVLPALQELEEATGRDVP
Ga0132256_1023619202	3300015372	Arabidopsis Rhizosphere	MGAESTPLPSLEELRALARAQGVDPTDADLEGVLVFLRTVLPALRELEEGTGRDVPPAGLYFPDPEAT*
Ga0183260_100112009	3300017787	Polar Desert Sand	MDDDSIPLPALAELRAQARRQGIDPTDADLEAVLGFLGTVLPALQELEEATGREISPAGLYLPDGESP
Ga0183260_100156157	3300017787	Polar Desert Sand	MSADSIPLPALAELRALARLQGVEPTDTDLEGVLGFLATVLPALRALEEQTGRDIPPAGLYLPDPEAT
Ga0136617_107032991	3300017789	Polar Desert Sand	MSTDSTPLPTLAELRALARLQGVEPTDADLEEVLGFLATVLPALRALEAQTGRDIPPAGLYLPDP
Ga0136617_114301061	3300017789	Polar Desert Sand	MGADSIPLPTLAELRGQARRQGVDPTDADLEAVLGFLATVLPPLQELEEATGREVPPAGMYLPDAESP
Ga0190266_100184014	3300017965	Soil	MTGDSTPLPTLDELRALARVQGVEPTDADLEGVLGFLATVLPALRELEERTGRDVPPAGLYLPPEAT
Ga0190266_100504963	3300017965	Soil	MGAESTPLPSLEELRALARAQGVDPTDADLEGVLGFLRTVLPALRELEEETGRDVPPAGLYLPDPEAT
Ga0190266_101136533	3300017965	Soil	MTSESTPLPTLDQLRALARVQGVEPTDTDLEGVLGFLRTVLPALRELEEGTGRDVPPAGMYFPDPEAT
Ga0190275_100259005	3300018432	Soil	MSTDSTPLPSLAELRALARLQGVEPSDADLEAVLGFLGTVLPTLRALEDRTGRDIPPAGMYHPDPEAT
Ga0190268_100730832	3300018466	Soil	MTGDSTPLPTLDELRALARVQGVEPNDADLEAVLGFLATVLPALRELEERTGRDVPPAGLYLPPEAT
Ga0190268_101173382	3300018466	Soil	LPTLDQLRALARVQGVEPTDSDLEGVLGFLRTVLPALRELEEGTGRDVPPAGMYFPDPEA
Ga0190270_100993703	3300018469	Soil	MTGDSTPLPTLDELRALARVQGVEPTDADLEGVLGFLTTVLPALRELEERTGRDVPPAGLYLPPEAT
Ga0190270_103001702	3300018469	Soil	MTSESTPLPTLDQLRALARVQGVEPTDTDLEGVLGFLRTVLPALRELEEGTGRDVPPAGMYLPDPEST
Ga0190274_110844913	3300018476	Soil	MSTDSTPLPSLAELRALARLQGVEPSDADLEAVLGFLGTVLPTLRALEDRTGRDIP
Ga0190271_103637874	3300018481	Soil	MADESTPLPTLDELRALARVQGVEPTDSDLEGVLGFLRTVLPALRELEEGTSRDVPPAGMYLPDPEAT
Ga0190271_106795481	3300018481	Soil	MTGDSTPLPTLDELRALARVQGVEPTDADLEGVLGFLATVLPALRELEERTGRDVP
Ga0190271_107584483	3300018481	Soil	MSSDSTPLPSLAELRALARLQGVEPTDDDLEGVLGFLGTVLPTLRALEEQTARDVPPAGMYHPDPEAT
Ga0190271_108125922	3300018481	Soil	MTDESSPLPTLDELRALARVQGVEPTDADLEGVLGFLRTVLPALRELEEHTGRDVPPAGMYLPDPEAT
Ga0190271_122205301	3300018481	Soil	MTSESTPLPTLDQLRALARVQGVEPTDADLEGVLGFLRTVLPDLRELEEGTGRDVPPAGMYLPDPE
Ga0190271_126270771	3300018481	Soil	GDSTPLPTLDELRALARVQGVEPTDADLEGVLGFLATVLPALRELEERTGRDVPPAGLYLPPEAT
Ga0173481_100012106	3300019356	Soil	MEPESSLVPSLDELRALARAQGVEPTDADLEGVLGFLRTVLPSLRELEEATQRDVPPAGMYLPDPEAT
Ga0247790_101014703	3300022915	Soil	MGAESTPLPSLEELRALARAQGVDPTDADLEGVLGFLGNVLPALRELEGETGRDVPPAGMYLPDREAT
Ga0247797_10518223	3300023057	Soil	MEPESSLVPSLDELRALARAQGVEPTDADLEGVLGFLRTVLPSLRELEEATQRDVPPAGMYL
Ga0247754_11237232	3300023102	Soil	MTNDSTSLPSLAELRALARVQGVEPSDADLEGVLGFLRTVLPALQELEEATGRDVPPAGMYLPDPEAA
Ga0210076_10113342	3300025567	Natural And Restored Wetlands	MGMEPESSLVPSLDELRALARAQGVEPTDADLEGVLGFLRTVLPSLRELEEATQRDVPPAGLYLPDPEAA
Ga0210113_10311151	3300025796	Natural And Restored Wetlands	MADESTPVPSLDELRALARAQGVEPTDADLEGVLGFLRTVLPALRELEEGTGRDVPPAGLYLPDPEAT
Ga0207669_100564723	3300025937	Miscanthus Rhizosphere	MANESTQLPSLEELRALARVQGVEPTDADLEGVLGFLRTVLPALRELEQGTGREIPPAGMYLPDPEAT
Ga0207703_122211421	3300026035	Switchgrass Rhizosphere	MEPESSLVPSLDELRALARAQGVEPTDADLEGVLGFLRTVLPSLRELEEATQRDVPPAGMYLPD
Ga0208537_10109642	3300026071	Natural And Restored Wetlands	TPLPSLDELRALARAQGVDPSDADLEGVLGFLRTVLPALRELEEGTGRDVPPAGMYLPDPEAT
Ga0207708_104590683	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MEPESSLVPSLDDLRALARAQGVEPTDADLEGVLGFLRTVLPSLRELEEATQRDVPPAGMYLPDPEAT
Ga0207428_101349034	3300027907	Populus Rhizosphere	MGAESTPLPSLEELRALARAQGVDPTDADLEGVLGFLGIVLPALRELEGETGRDVPPAGMYLPDREAT
Ga0247828_106105003	3300028587	Soil	MTSESTPLPTLDQLRALARVQGVEPTDADLEGVLGFLRTVLPALRELEEGTGRDVPPAGMYL
Ga0247828_108397532	3300028587	Soil	MTSESTPLPTLDQLRALARVQGVEPTDADLEGVLGFLATVLPALRELEERTGRDVAPAGMYLPDPEAT
Ga0247818_104292132	3300028589	Soil	MTSESTPLPTLDQLRALARVQGVEPTDADLEGVLGFLGTVLPALRELEEGTSRDVAPAGMYLPDPEAT
Ga0247818_113110561	3300028589	Soil	MTSESTPLPTLDQLRALARVQGVEPTDADLEGVLGFLRTVLPALRELEEGTGRDVPPAGMYLPDPEAT
Ga0247818_114252492	3300028589	Soil	MTNESTQLPTVQELRALARVQGVEPTDADLEGVLGFLRTVLPALRELEGGTGRDVPPAGMYLPDPEAT
Ga0247823_115227842	3300028590	Soil	MTGDSTPLPTLDELRALARVQGVEPTDADLEGVLGFLATVLPALRELEERTGRDVPPAGLYLPPDAT
Ga0247822_111349751	3300028592	Soil	MTNESTQLPTVQELRALARVQGVEPTDADLEGVLGFLRTVLPALRELEGGTGRDVPPAGM
Ga0247821_102596362	3300028596	Soil	MTNESTQLPTVEELRALARVQGVEPTDADLEGVLGFLRTVLPALRELEQGTVREIPPAGMYLPDPEAS
Ga0247820_104125302	3300028597	Soil	MTSESTPLPTLDQLRALARVQGVEPTDADLQGVLGFLATVLPALRELEERTGRDVAPAGMYLPDPEAT
Ga0247825_101608113	3300028812	Soil	MTNESTQLPTVEELRALARVQGVEPTDADLEGVLGFLRTVLPALRELEQGTGREIPPAGMYLPDPEAS
Ga0247826_110559663	3300030336	Soil	MTNESTQLPTVEELRALARVQGVEPTDADLEGVLGFLRTVLPALRELEQGTGREIPPAGMYLPDPEAT
Ga0310887_104888561	3300031547	Soil	MAAESTPVPSLEELRALARAQGVEPTDADLEGVLGFLRTVLPALRELEEGTGRDVPPAGV
Ga0310887_105098912	3300031547	Soil	MSGDSTPLPTLDELRALARVQGVEPTDADLEGVLGFLATVLPALRELEERTGRDVPPAGLYLSPEAT
Ga0310886_102982022	3300031562	Soil	MAAESTPVPSLEELRALARAQGVEPTDADLEGVLGFLRTVLPALRELEEGTGRDVPPAGVYLPDPEAT
Ga0310813_107511262	3300031716	Soil	MEPESSLVPSLDELRALARAQGVEPTDADLEGVLGFLRTVLPALRELAEATQRDVPPAGMYLPDPEAT
Ga0310892_100458744	3300031858	Soil	MTNESTQLPTVEELRALARVQGVEPTDADLEGVLGFLRTVLPALRELEQGTGREITPAGMYLPDPEAT
Ga0310892_106428983	3300031858	Soil	VPSLEELRALARAQGVEPTDADLEGVLGFLRTVLPALRELEEGTGRDVPPAGVYLPDPEA
Ga0310900_115330982	3300031908	Soil	MTGDSTPLPTLAELRALARVQGVEPTDADLEGVLGFLATVLPALRELEERTGRDVPPAGLYLPPEAT
Ga0310884_104082421	3300031944	Soil	MAAESTPVPSLEELRALARAQGVEPTDADLEGVLGFLRTVLPALRELEEGTGRDVPPAGVYL
Ga0307409_1015392312	3300031995	Rhizosphere	MATESTPLPTVDELRALARAQGVDPTDADLEGVLGFLRTVLPALGELEAGTGRDIPPAGLYLPDPEAA
Ga0307416_1007058123	3300032002	Rhizosphere	MATESTPLPTVDELRALARAQGVDPTDADLEGVLGFLRTVLPALGELEAGTARDIP
Ga0310906_103019943	3300032013	Soil	VPSLEELRALARAQGVDPTDVDLEGVLGFLRTVLPALRELEEETGRNVPPA
Ga0310895_101279711	3300032122	Soil	MTNESTQLPTVEELRALARVQGVEPTDADLEGVLGFLRTVLPALRELEQGTGREIPPA
Ga0307470_109091562	3300032174	Hardwood Forest Soil	MGAESTPLPSLEELRALARAQGVDPTDADLEGVLGFLGNVLPALRELEGETGRDVPPARMYLPDREAT
Ga0247830_111137733	3300033551	Soil	MTGDSTPLPTLDELRALARVQGVEPTDADLEGVLGFLATVLPALRELEERTGRDVPPAGLYL
Ga0364933_042447_350_556	3300034150	Sediment	MTSESTPLPTLDQLRALARVQGVEPTDTDLEGVLGFLRTVLPALRELEEGTGRDVPPAGMYLPDPEAT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F101463

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences