Metagenome Family F101447

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F101447
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	108 residues
Representative Sequence	MKMKSRDLIFIAIVILVVGGLWWLSTRNKAKAMRPTPPEHLTAKLRDDCLKCHLPDTLAQMELQHKHPNKWRDERVECTRCHKPPQEANALNLNARKISELAALLRRAN
Number of Associated Samples	46
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.92 %
% of genes near scaffold ends (potentially truncated)	20.59 %
% of genes from short scaffolds (< 2000 bps)	75.49 %
Associated GOLD sequencing projects	41
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (94.118 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (31.372 % of family members)
Environment Ontology (ENVO)	Unclassified (50.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.922 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 48.18% β-sheet: 0.00% Coil/Unstructured: 51.82%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF13435	Cytochrome_C554	27.72
PF00171	Aldedh	19.80
PF00854	PTR2	18.81
PF13620	CarboxypepD_reg	4.95
PF00474	SSF	1.98
PF05222	AlaDh_PNT_N	1.98
PF07995	GSDH	0.99
PF13231	PMT_2	0.99
PF05670	NFACT-R_1	0.99
PF05685	Uma2	0.99
PF04459	DUF512	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	19.80
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	19.80
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	19.80
COG3104	Dipeptide/tripeptide permease	Amino acid transport and metabolism [E]	18.81
COG1293	Ribosome quality control (RQC) protein RqcH, Rqc2/NEMF/Tae2 family, contains fibronectin-(FbpA) and RNA- (NFACT) binding domains	Translation, ribosomal structure and biogenesis [J]	0.99
COG1625	Fe-S oxidoreductase, related to NifB/MoaA family	Energy production and conversion [C]	0.99
COG2133	Glucose/arabinose dehydrogenase, beta-propeller fold	Carbohydrate transport and metabolism [G]	0.99
COG4636	Endonuclease, Uma2 family (restriction endonuclease fold)	General function prediction only [R]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.12 %
Unclassified	root	N/A	5.88 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.12 %
Unclassified	root	N/A	5.88 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.12 %
Unclassified	root	N/A	5.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	69.61 %
Unclassified	root	N/A	5.88 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	53.92 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	10.78 %
Unclassified	root	N/A	5.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	53.92 %
Unclassified	root	N/A	5.88 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	3.92 %
Chloracidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Chloracidobacterium	0.98 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	0.98 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	53.92 %
Unclassified	root	N/A	5.88 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	3.92 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.98 %
Chloracidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Chloracidobacterium	0.98 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	53.92 %
Unclassified	root	N/A	5.88 %
Pyrinomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas	3.92 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.98 %
Chloracidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Chloracidobacterium	0.98 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	53.92 %
Unclassified	root	N/A	5.88 %
Pyrinomonas methylaliphatogenes	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	3.92 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.98 %
Chloracidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Chloracidobacterium	0.98 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000559\|F14TC_100562386	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300004052\|Ga0055490_10002515	All Organisms → cellular organisms → Bacteria	3220	Open in IMG/M
3300005332\|Ga0066388_100082133	All Organisms → cellular organisms → Bacteria	3601	Open in IMG/M
3300005332\|Ga0066388_100358672	All Organisms → cellular organisms → Bacteria	2104	Open in IMG/M
3300005332\|Ga0066388_100476437	All Organisms → cellular organisms → Bacteria	1887	Open in IMG/M
3300005332\|Ga0066388_100835962	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1508	Open in IMG/M
3300005332\|Ga0066388_101653426	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1130	Open in IMG/M
3300005332\|Ga0066388_101697386	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1117	Open in IMG/M
3300005332\|Ga0066388_102697218	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	906	Open in IMG/M
3300005332\|Ga0066388_102723777	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	902	Open in IMG/M
3300005332\|Ga0066388_102993769	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300005332\|Ga0066388_103970154	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	754	Open in IMG/M
3300005332\|Ga0066388_105407122	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	647	Open in IMG/M
3300005713\|Ga0066905_100179293	All Organisms → cellular organisms → Bacteria	1561	Open in IMG/M
3300005713\|Ga0066905_100323874	All Organisms → cellular organisms → Bacteria	1220	Open in IMG/M
3300005713\|Ga0066905_100474020	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1034	Open in IMG/M
3300005713\|Ga0066905_100517584	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	995	Open in IMG/M
3300005713\|Ga0066905_100658869	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	893	Open in IMG/M
3300005713\|Ga0066905_100853406	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	793	Open in IMG/M
3300005713\|Ga0066905_101152696	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	691	Open in IMG/M
3300005764\|Ga0066903_107658089	Not Available	556	Open in IMG/M
3300005937\|Ga0081455_10003348	All Organisms → cellular organisms → Bacteria	18483	Open in IMG/M
3300005937\|Ga0081455_10228063	All Organisms → cellular organisms → Bacteria	1376	Open in IMG/M
3300006049\|Ga0075417_10103940	All Organisms → cellular organisms → Bacteria	1291	Open in IMG/M
3300006196\|Ga0075422_10476554	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563	Open in IMG/M
3300006844\|Ga0075428_102720868	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300006845\|Ga0075421_100033523	All Organisms → cellular organisms → Bacteria → Acidobacteria	6502	Open in IMG/M
3300006845\|Ga0075421_100183986	All Organisms → cellular organisms → Bacteria	2596	Open in IMG/M
3300006845\|Ga0075421_100842590	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1052	Open in IMG/M
3300006845\|Ga0075421_100950990	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300006845\|Ga0075421_102191667	Not Available	583	Open in IMG/M
3300006846\|Ga0075430_100269433	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1409	Open in IMG/M
3300006847\|Ga0075431_100154383	All Organisms → cellular organisms → Bacteria	2362	Open in IMG/M
3300006847\|Ga0075431_100289775	All Organisms → cellular organisms → Bacteria → Acidobacteria	1656	Open in IMG/M
3300006847\|Ga0075431_101580623	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300006871\|Ga0075434_100365914	All Organisms → cellular organisms → Bacteria	1463	Open in IMG/M
3300006880\|Ga0075429_101765897	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300006904\|Ga0075424_101062825	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	863	Open in IMG/M
3300006904\|Ga0075424_101639554	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	682	Open in IMG/M
3300007004\|Ga0079218_14001267	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300009094\|Ga0111539_11801444	Not Available	710	Open in IMG/M
3300009094\|Ga0111539_12562323	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	591	Open in IMG/M
3300009100\|Ga0075418_10407775	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1454	Open in IMG/M
3300009100\|Ga0075418_10426498	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1420	Open in IMG/M
3300009100\|Ga0075418_11029350	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	891	Open in IMG/M
3300009147\|Ga0114129_11139916	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Chloracidobacterium	974	Open in IMG/M
3300009156\|Ga0111538_12107120	Not Available	709	Open in IMG/M
3300009792\|Ga0126374_10066900	All Organisms → cellular organisms → Bacteria	1904	Open in IMG/M
3300009792\|Ga0126374_10285856	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1097	Open in IMG/M
3300010043\|Ga0126380_10191020	Not Available	1361	Open in IMG/M
3300010043\|Ga0126380_10198890	All Organisms → cellular organisms → Bacteria → Acidobacteria	1340	Open in IMG/M
3300010043\|Ga0126380_10271917	All Organisms → cellular organisms → Bacteria	1187	Open in IMG/M
3300010043\|Ga0126380_10401266	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1019	Open in IMG/M
3300010043\|Ga0126380_10401266	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1019	Open in IMG/M
3300010043\|Ga0126380_10863365	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	748	Open in IMG/M
3300010046\|Ga0126384_10048628	All Organisms → cellular organisms → Bacteria	2913	Open in IMG/M
3300010046\|Ga0126384_10110702	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	2047	Open in IMG/M
3300010046\|Ga0126384_11499692	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	632	Open in IMG/M
3300010046\|Ga0126384_12241135	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300010046\|Ga0126384_12328653	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300010047\|Ga0126382_10106565	All Organisms → cellular organisms → Bacteria	1825	Open in IMG/M
3300010047\|Ga0126382_10508236	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	970	Open in IMG/M
3300010359\|Ga0126376_10614141	All Organisms → cellular organisms → Bacteria	1031	Open in IMG/M
3300010359\|Ga0126376_10746345	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	948	Open in IMG/M
3300010359\|Ga0126376_10985518	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	842	Open in IMG/M
3300010359\|Ga0126376_11302489	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	747	Open in IMG/M
3300010360\|Ga0126372_11236612	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	773	Open in IMG/M
3300010360\|Ga0126372_13319731	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300010362\|Ga0126377_10039897	All Organisms → cellular organisms → Bacteria → Acidobacteria	4032	Open in IMG/M
3300010362\|Ga0126377_10135921	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	2292	Open in IMG/M
3300010362\|Ga0126377_10434855	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	1331	Open in IMG/M
3300010362\|Ga0126377_10480351	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1271	Open in IMG/M
3300010362\|Ga0126377_11147148	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	847	Open in IMG/M
3300010362\|Ga0126377_11555567	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	735	Open in IMG/M
3300010362\|Ga0126377_12551241	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300010362\|Ga0126377_12744709	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300010397\|Ga0134124_10384570	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1331	Open in IMG/M
3300012021\|Ga0120192_10027684	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	925	Open in IMG/M
3300012081\|Ga0154003_1000484	All Organisms → cellular organisms → Bacteria	12446	Open in IMG/M
3300012081\|Ga0154003_1002804	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	5239	Open in IMG/M
3300012081\|Ga0154003_1038602	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	833	Open in IMG/M
3300012204\|Ga0137374_10336303	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1223	Open in IMG/M
3300012944\|Ga0137410_10011925	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	5900	Open in IMG/M
3300012948\|Ga0126375_10124731	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1578	Open in IMG/M
3300012948\|Ga0126375_10197665	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1317	Open in IMG/M
3300012971\|Ga0126369_10112886	All Organisms → cellular organisms → Bacteria → Acidobacteria	2486	Open in IMG/M
3300015371\|Ga0132258_10565386	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2851	Open in IMG/M
3300018469\|Ga0190270_10003265	All Organisms → cellular organisms → Bacteria	8061	Open in IMG/M
3300019360\|Ga0187894_10002834	All Organisms → cellular organisms → Bacteria	20266	Open in IMG/M
3300019360\|Ga0187894_10014734	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	6078	Open in IMG/M
3300019458\|Ga0187892_10011863	All Organisms → cellular organisms → Bacteria	10546	Open in IMG/M
3300019487\|Ga0187893_10070687	All Organisms → cellular organisms → Bacteria	3307	Open in IMG/M
3300025971\|Ga0210102_1011119	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1903	Open in IMG/M
3300027873\|Ga0209814_10421200	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	588	Open in IMG/M
3300027907\|Ga0207428_10864717	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300027909\|Ga0209382_10043076	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5406	Open in IMG/M
3300027909\|Ga0209382_10067773	All Organisms → cellular organisms → Bacteria	4221	Open in IMG/M
3300027909\|Ga0209382_10197222	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	2309	Open in IMG/M
3300027909\|Ga0209382_12105833	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300031576\|Ga0247727_10032571	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	7118	Open in IMG/M
3300031908\|Ga0310900_10522869	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	926	Open in IMG/M
3300032075\|Ga0310890_11261744	Not Available	603	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	65.69%
Host-Associated	Host-Associated	34.31%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	63.73%
Plants	Host-Associated → Plants	31.37%
Fungi	Host-Associated → Fungi	2.94%
Aquatic	Environmental → Aquatic	1.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	58.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere	28.43%
Cave	Environmental → Terrestrial → Cave	4.90%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.94%
Mycelium	Host-Associated → Fungi → Mycelium	2.94%
Marine	Environmental → Aquatic → Marine	1.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.22%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	28.43%
Loam	Environmental → Terrestrial → Soil → Loam	19.61%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	4.90%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	2.94%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.96%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	28.43%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	18.63%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	4.90%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	2.94%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.96%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.96%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.98%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	31.37%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	28.43%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	18.63%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	2.94%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	2.94%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.96%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.96%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.98%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.98%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.98%
Bio-Ooze	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze	0.98%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.98%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300004052	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300012021	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T1	Environmental	Open in IMG/M
3300012081	Attine ant fungus gardens microbial communities from Florida, USA - TSFL087 MetaG	Host-Associated	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019360	White microbial mat communities from a lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - GBC170108-1 metaG	Environmental	Open in IMG/M
3300019458	Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaG	Environmental	Open in IMG/M
3300019487	White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG	Environmental	Open in IMG/M
3300025971	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031576	Biofilm microbial communities from Wishing Well Cave, Virginia, United States - WW16-25	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TC_1005623862	3300000559	Soil	MKLKSRDLIFIAIVILVVGGLWWLSTRNKAKAMLPTPPEHLTAKSRDDCFKCHLPITLEEMELQHKHPNKWRDERVDCTRCHKPPREANAMNPNTRQINELATSLQRAN*
Ga0055490_100025152	3300004052	Natural And Restored Wetlands	MKLKSRDLIFIAIVAVVVGGLWFLSTRNKAKAMPPNPPEHLTAKSREECFQCHLPAKFAELELQHKHPGKWRDERVSCLLCHPAPSRATAQNLNSLKTPVATQAQRAHRYLRRVTD*
Ga0066388_1000821332	3300005332	Tropical Forest Soil	MRMKSRDLIFIAIVIFVVGGLWLLSTRNKAKALRPSPPEHLTARMRGECLKCHLPDVLAELELQHKHPNKWRDERVECTRCHKPPQEANARNLKARQISELAGLIRRAN*
Ga0066388_1003586722	3300005332	Tropical Forest Soil	MRVKSRDLIFIAIVIVVVGGLGWLSTRNNPKAMQPTPPEHLTAKFRGECLKCHLPEKLAEMELQHKHPNKWRDDRVECTRCHKPPREAKALNLTARQINELATLLRRAN*
Ga0066388_1004764372	3300005332	Tropical Forest Soil	MKLKSRDLIFIAIVILVVGGLWWLSTRNKAKALLPTPPEHLTAKLRDDCLKCHLPNTLEEMELQHKHPNKWRDERVECTRCHKPPREANAMNLNIRQFNELATLLRREN*
Ga0066388_1008359622	3300005332	Tropical Forest Soil	MKMKSRDLIFIAIVILVVGGLWWLSTRNKAKAMRPTPPEHLTAKLRDDCLKCHLPDTLAQMELQHKHPNKWRDERVECTRCHKPPQEANALNLNTRQISEFAALLRRAD*
Ga0066388_1016534261	3300005332	Tropical Forest Soil	MKMKPRDLIFIAIVIFVVGGLWWLSTRNKAKAMRPNPPEHLTAKFRDECLKCHTPEILAERELQHKHPNKWRDERVECTRCHKTPKEATAQNLKARQISELAGLLRRAN*
Ga0066388_1016973862	3300005332	Tropical Forest Soil	MKMKSRDLIFIAIVILVVGGLWWLSTRNKAKAMRPTPPEHLTAKLREECLKCHLPETLAQMEIQHKHPNKWRDERVECTRCHKPPQEANALNLNTRQIGEFASLLRRAN*
Ga0066388_1026972182	3300005332	Tropical Forest Soil	MRMKPRDLIFIAIVIVVVGGLWWLSTRNKAKAMRPTPPEHLTAKLRDECLKCHLPEKLAELELQHKHPGKWRDARVECTRCHKTPQEANAQNPRASQIIELAGLLRRVN*
Ga0066388_1027237772	3300005332	Tropical Forest Soil	MKMKSRDLIFIAIVVLVVGGLWWLSTRNKAKSMLPTPPEHLTAKLRDDCLKCHLPETLAQMELQHKHPNKWRDERVECTRCHKPPQEANALNSNRKISEFAALLRRAY*
Ga0066388_1029937692	3300005332	Tropical Forest Soil	MKLKSRDLIFIAIVIGVVGGLAWLSTRNKAKAMLPTPPEHLTARQRDECLKCHLPEKLAEMELQHKHPIKWRDANVKCILCHKPPREGVALNTWRINELATLLRRAN*
Ga0066388_1039701542	3300005332	Tropical Forest Soil	MKMKSRDLIFIAIVILVVGGLWWLSTRNKAKAMLPTPPEHLTAKSRDDCFKCHLPKTLEEMELQHKHPNKWRDDAVSCTRCHKPPQEANALNLNTRRLGEFASLLRRAY*
Ga0066388_1054071221	3300005332	Tropical Forest Soil	MKMKSRDLIFIAIVVFVVGGLWWLSTRNKAKALLPTPPEHLTAKSRDDCLKCHLPETLAQMELQHKHPNKWRDESVDCTRCHKPPRDANALSLNKRQISEFAALLRRAN*
Ga0066905_1001792932	3300005713	Tropical Forest Soil	MKMKSRDLIFIAIVVLVVGGLWWLSTRNKAKAMRPTPPEHLTAKLRDDCLKCHLPETLAQMELQHKHPNKWRDERVECTRCHKSPQEANALNLNARKISELAALLRRAN*
Ga0066905_1003238742	3300005713	Tropical Forest Soil	MKMKFRDLIFIAIVILVVGGLWWLSTRNKAKAMLPAPPEHLTAKLRDDCLKCHIPETLAEMELQHKHPNKWRDERVECIRCHKPPQGANALKLNTRQMSEFAALLWRAN*
Ga0066905_1004740202	3300005713	Tropical Forest Soil	MKMKSRDLIFIAIVVLVVGGLWWLSTRNKAKAMLPTPPEHLTAKSRDDCFKCHLPQKLEEMELQHKHPNKWRDEAVECTRCHKPPQEANALNPNRGQISEFAALLRRAN*
Ga0066905_1005175842	3300005713	Tropical Forest Soil	MKLKSRDLIFIAIVILVVGGLWWLSTRNKAKALLPTPPEHLTAKLRDDCLKCHLPNTLEEMELQHKHPNKWRDERVECTRCHKPPREANAMNLNTRQ
Ga0066905_1006588692	3300005713	Tropical Forest Soil	MRVKSRDLIFIAIVLLVVGGLWWLSTRNKAKAMRPTPPEHLTAKLRDECLKCHIPDKLAEMELQHKHPNKWRDARVECTRCHKTPQGANALFLNAGRINEFATLLRRAN*
Ga0066905_1008534062	3300005713	Tropical Forest Soil	MKMKSRDLIFIAIVLLVVGGLWWLSTRNKAKALLPTPPEHLTAKLRDDCLKCHLPETLAQMELQHKHPNKWRDERVECTRCHKPPQEANALNLNTRRISELAALLRRAN*
Ga0066905_1011526961	3300005713	Tropical Forest Soil	MKMKPRDLIFIAIVIFVVGGLWWLSTRNKAKAMRPTPPEHLTAKMRGECLKCHLPEKLAEWELQHKHPNKWRDERVECTRCHKPPQEANAQNLRARRIGEIAGLLRRVN*
Ga0066903_1076580891	3300005764	Tropical Forest Soil	MKLKSRDLAFAAIVLFVIGGLWWLSTKNKAKSMLPYPPEHLTARSREDCLKCHLPSKLAEMELQHKHPGKWSDKKVECTRCHKPPQETKAQSLNAQLVIDWASRAPRAN*
Ga0081455_100033484	3300005937	Tabebuia Heterophylla Rhizosphere	MKMKSRDLIFIAIVVLVVGGLWWLSTRNKAKAMRPTPPEHLTAKLRDDCLKCHLPETLAQMELQHKHPNKWRDERVECTRCHKPPQEANALNLNDRKISELAALLRRAN*
Ga0081455_102280632	3300005937	Tabebuia Heterophylla Rhizosphere	MKLKSRDLIFIAIVLFVVGGLWWLSTRNKAKAMLPTPPEHLTAKFRDECLKCHLPQTLEEMELQHKHPNKWRDTAVECTRCHKPPREANALNLNTRQISEFAALLRRAN*
Ga0075417_101039402	3300006049	Populus Rhizosphere	MKMKSRDLIFIAIVLLVVGGLWWLSTRNKAKAMSPAPPEHLTAKLRDECLKCHLPTTLEEMELQHKHPNKWRDARVECTRCHKPPKEANALNLNAGQIKELVAMLRRAN*
Ga0075422_104765541	3300006196	Populus Rhizosphere	MKLKSRDLIFIAIVILVVGGLWWLSTRNKAKAMRPTPPEHLTAKSRDDCFKCHLPITLEEMELQHKHPNKWRDERVDCTRCHKPPREANAMNLNTWQINELATLLRREN*
Ga0075428_1027208682	3300006844	Populus Rhizosphere	MKLKSRDLIFIAIVLLVVGGLWWLSTRNKAKAMRPTPPEHLTAKLRDECLKCHLPDTLAEMELQHKHPNKWRDARVECTRCHKTPQGANALYLNTRQINELATLLRRAN*
Ga0075421_1000335234	3300006845	Populus Rhizosphere	MKMKSRDLIFIAIVVLVVGGLWWLSTRNKAKAMLPTPPEHLTAKLRDDCLKCHLPETLAQMELQHKHPNKWRDERVECTRCHKPPQEANALNLNTRQIAEFASLLRRAY*
Ga0075421_1001839862	3300006845	Populus Rhizosphere	MKLKSRDLFFIAIVVLVVGGLWWLSTRNKAKAMRPAPPEHLTAKLRDECLKCHLPEKLAEMELQNKHPGKWRDPKVECTRCHKPPKEANALNLNARQINELVALLRRAN*
Ga0075421_1008425902	3300006845	Populus Rhizosphere	MKLKSRDLIFIAIVLLVVGGLWWLSTRNKAKAMRPTPPEHLTAKLRDECLKCHLPDTLAEMELQHKHPNKWRDERVECTRCHKTPQGANALYLNTRQINELATLLRRAN*
Ga0075421_1009509901	3300006845	Populus Rhizosphere	MKMKSRDLIFISIVVLVVGGLLWLSTRNKAKAMSPAPPEHLTAKLRDECLKCHLPEKLAEMELQHKHPGKWRDPKVECTRCHKPPKEANALNLNARQINELVALLRRAN*
Ga0075421_1021916671	3300006845	Populus Rhizosphere	MKMKSRDMIFIAIVAIVVGGLWWLSTKDKAKAMSPAPPEHLTAKLRDECLKCHLPEQLAEMERQNKHPGKWRDAHVECTRCHKPPKEANALNLNAGEINELVAMLRRAN*
Ga0075430_1002694332	3300006846	Populus Rhizosphere	MKMKSRDLIFIAIVVLVVGGLWWLSTKDKAKAMSPAPPEHLTAKLRDECLKCHLPEKLAEMELQHKHPGKWRDPKVECTRCHKPPKEANALNLNAR
Ga0075431_1001543833	3300006847	Populus Rhizosphere	MKLKSRDLIFIAIVILVVGGLWWLSTRNKAKAMRPTPPEHLTAKSRDDCFKCHLPITLEEMELQHKHPNKWRDERVDCTRCHKPPREANAMIPNTRQINEIATSLRRAD*
Ga0075431_1002897752	3300006847	Populus Rhizosphere	MKMKSRDMIFIAIVAIVVGGLWWLSTRNKAKAMSPAPPEHLTAKLRDECLKCHLPEQLAEMERQNKHPGKWRDAHVECTRCHKPPKEANALNLNAGEINELVAMLRRAN*
Ga0075431_1015806232	3300006847	Populus Rhizosphere	MKMKSRDLIFISIVVLVVGGLLWLSTRNKAKAMSPAPPEHLTAKLRDECLKCHLPEKLAEMELQHKHPGKWRDPKVECTRCHKPPKEANALNLNARQI
Ga0075434_1003659141	3300006871	Populus Rhizosphere	HLMKMKSRDLIFIAIVVLVVGGLWWLSTRNKAKALLPTPPEHLTAKSRDDCFKCHIPKTLEEMELQHKHPNKWRDERVECTRCHKPPREANAMNLNTWQINELATLLRREN*
Ga0075429_1017658971	3300006880	Populus Rhizosphere	KSRDLIFIAIVILVVGGLWWLSTRNKAKAMRPTPPEHLTAKSRDDCFKCHLPITLEEMELQHKHPNKWRDERVDCTRCHKPPREANAMNLNTWQINELATLLRREN*
Ga0075424_1010628251	3300006904	Populus Rhizosphere	MKMKSRDLIFIAIVIFVVGGLWWLSTRNKAKAMRPTPPEHLTAKFRDDCLKCHVPETLAQMELQHKHPNKWRDERVECTRCHKPPQEATALNLNARKISELAALLRRAN*
Ga0075424_1016395541	3300006904	Populus Rhizosphere	MKMKSRDLIFIAIVVLVVGGLWWLSTRNKAKALLPTPPEHLTAKSRDDCFKCHIPKTLEEMELQHKHPNKWRDERVECTRCHKPPREANALNQNKRQISEFAALLRRAN*
Ga0079218_140012672	3300007004	Agricultural Soil	MKLKSRDLIFIAIVVVVVGGLAWLSTRNKAKAMKPTPPEHLTAKQRDECLKCHLPDKLAEMELQHKHPNKWRDERVKCTLCHKPPREATALNSDTRQIHELASLLRRAN*
Ga0111539_118014441	3300009094	Populus Rhizosphere	MKMKSRDVIFIAIVVLVVGGLWWLSTRNKAKAMSPAPPEHLTAKLRDECLKCHLPEQLAEMERQNKHPGKWRDAHVECTRCHKPPKEANALNLNAGEINELVAMLRRAN*
Ga0111539_125623231	3300009094	Populus Rhizosphere	ISIKPGNYLMKVKSRDLIFIAIVIAVVGGLAWLSTRNKAKSMTPTPPEHLTAKQRDECLKCHLPAKLAEMELQHKHPIKWRDERVKCTLCHKPPREATALKLNSRRINELASLLRRELRQSRIED*
Ga0075418_104077753	3300009100	Populus Rhizosphere	MKMKSRDLIFIAIVVLVVGGLLWLSTRNKAKAMSPAPPEHLTAKLRDECLKCHLPTTLEEMELQHKHPNKWRDARVECTRCHKPPKEANALNLNARQINDLVALLRRYN*
Ga0075418_104264982	3300009100	Populus Rhizosphere	MKMKSRDVIFIAIVVLVVGGLWWLSTRNKAKAMSPAPPEHLTAKLRDECLKCHLPQTLEAMELQHKHPIKWRDARVECTRCHKPPQGANALNLNTRQINELAALLRR
Ga0075418_110293501	3300009100	Populus Rhizosphere	MKMKSRDLIFIAIVVLVVGGLLWLSTRNKAKAMSPAPPEHLTAKLRDECLKCHLPEKLAEMELQHKHPGKWRDPKVECTRCHKPPKEANALNLNARQINELVALLRRAN*
Ga0114129_111399162	3300009147	Populus Rhizosphere	MKMKSRDMIFIAIVVFVVGGLLWLSTRNKAKAMSPAPPEHLTAKLRDECLKCHLPEQLAEMERQNKHPGKWRDAHVECTRCHKPPKEANALNLNAGEINELVAMLRRAN*
Ga0111538_121071201	3300009156	Populus Rhizosphere	MKMKSRDVIFIAIVVLVVGGLWWLSTRNKAKAMSPAPPEHLTAKLRDECLKCHLPEQLAEMERQKKHPGKWRDAHVECTRCHKPPKEANALNLDARPINELVALLRRAN*
Ga0126374_100669001	3300009792	Tropical Forest Soil	MKMKSRDLIFIAIVVLVVGGLWLLSTRNKAKAMLPTPPEHLTAKLRDECLKCHLPETLAQMEIQHKHPNKWRDEKIECTRCHKPPQEATALNLNTRQISELATLLRRAN*
Ga0126374_102858562	3300009792	Tropical Forest Soil	IFIAIVIFVVGGLWWLSTRNKAKAMRPNPPEHLTAKFRDECLKCHTPEILAERELQHKHPNKWRDERVECTRCHKTPKEATAQNLKARQINELAGLLRRAN*
Ga0126380_101910201	3300010043	Tropical Forest Soil	MKVKSRDLIFIAIVIGVVGGLAWLSTRNKAKAMQPTPPEHLTARQRDECLKCHLPEKLAEMELQHKHPIKWRDANVKCILCHKPPREGVALNARRISGLAALLWRAN*
Ga0126380_101988902	3300010043	Tropical Forest Soil	MKMKSRDLIFIAIVVLVVGGLWWLSTRNKAKAMLPTPPEHLTAKSRDDCFKCHLPQKLEEMELQHKHPNKWRDEAVECTRCHKPPQEANALYPNRGQISEFAALLRRAN*
Ga0126380_102719171	3300010043	Tropical Forest Soil	SRDLIFIAIVILVVGGLWWLSTRNKAKAMLPTPPEHLTAKSRDDCLKCHLPKTLEEMELQHKHPNKWRDERVDCTRCHKPPREANAMNLNTRQINELATLLRREN*
Ga0126380_104012661	3300010043	Tropical Forest Soil	SRDLIFIAIVILVVGGLWWLSTRNKAKAMLPTPPEHLTAKLRDDCLKCHLPNTLEEMELQHKHPNKWRDERVECTRCHKPPREANAMNLNTRQINELATLLRREN*
Ga0126380_104012662	3300010043	Tropical Forest Soil	MRVKSRDLIFIAIVLLVVGGLWWLSTRNKAKAMRPTPPEHLTAKLRDECLKCHLPDTLAEMELQHKHPNKWRDARVECTRCHKTPQGANALYLNTRQINELATLPRRAN*
Ga0126380_108633652	3300010043	Tropical Forest Soil	MRVKSRDLIFIAIVIVVVGGLGWLSTRNRAKAMQPNPPEHLTAKFRGECLKCHLPEKLAEMELQHKHPNKWRDDRVECTRCHKPPRGANALNLNARQINELATLLRRAN*
Ga0126384_100486284	3300010046	Tropical Forest Soil	MKMKPRDLIFIAIVIFVVGGLWWLSTKNKAKAMPPTPPEHLTAKLRDECLKCHLPEKLAELELQHKHPNKWRDDRVECTRCHKRPQEANARNQNARRINGLAGLLRRAN*
Ga0126384_101107022	3300010046	Tropical Forest Soil	MKSRDLIFIAIVIFVVGGLWLLSTRNKAKALRPSPPEHLTARMRGECLKCHLPDILAELELQHKHPNKWRDERVECTRCHKPPQEANARNLKARQISELADLIRRAN*
Ga0126384_114996921	3300010046	Tropical Forest Soil	MKMKSRDLIFIAIVVLVVGGLWWLSTRNKAKAMLPTPPEHLTAKLRDECLKCHLPETLAQMEIQHKHPNKWRDERVECTRCHKPPQEANALNLNTRQISEFAALLLSAN*
Ga0126384_122411351	3300010046	Tropical Forest Soil	IFIAIVIVVVGGLWWLSTRNKAKAMRPTPPEHLTAKLRDECLKCHLPEKLAELELQHKHPGKWRDARVECTRCHKTPQEANARIPRASHITELAGLLRRVN*
Ga0126384_123286531	3300010046	Tropical Forest Soil	MKLKSRDLIFIAIVIFVVGGLWWLSTRNKAKVMPPSAPHLTAKSREECLQCHLPAKLAEWELQHKHPGKWRDERVECTRCHKSPRGESAQSLNARQISEFAAFLRRSN*
Ga0126382_101065651	3300010047	Tropical Forest Soil	DLIFIAIVIFVVGGLWWLSTRNKAKAMRPTPPEHLTAQLRYECLKCHTPEKLAELELQHKHPNKWRDDRVECTRCHKRPQEANARNQNARRINGLAGLLRRAN*
Ga0126382_105082362	3300010047	Tropical Forest Soil	MKSRDLIFIAIVIFVVGGLWLLSTRNKAKALRPSPPEHLTARMRGECLKCHLPDVLAELELQHKHPNKWRDERVECTRCHKPPQEANARNLKARQISELAGLIRRAN*
Ga0126376_106141412	3300010359	Tropical Forest Soil	WWLSTRNKAKAMRPTPPEHLTAQLRYECLKCHTPEKLAELELQHKHPNKWRDDRVECTRCHKRPQEANARNQNARRINGLAGLLRRAN*
Ga0126376_107463452	3300010359	Tropical Forest Soil	IAIVLLVVGGLWWLSTRNKAKAMLPTPPEHLTAKSRQDCFKCHLPKTLEEMELQHKHPNKWRDEKIECTRCHKPPQEATALNLNTRQISELATLLRRAN*
Ga0126376_109855181	3300010359	Tropical Forest Soil	MKMKSRDLIFIAIVIFVVGGLAWLSTRNKAKAMLPTPPEHLTAKLRDECLKCHLPEKLAELELQHKHPIKWRDERVKCTLCHKPPREANALNPNTWQISELAGSLRLAY*
Ga0126376_113024891	3300010359	Tropical Forest Soil	MKMKSRDLIFIAIVVLVVGGLWWLSTRNKAKAMLPTPPEHLTAKLRDECLKCHLPETLAQMEIQHKHPNKWRDEAVECTRCHKPPQEANALDLNTRQISELATLLRRAN*
Ga0126372_112366121	3300010360	Tropical Forest Soil	VVVGGLGWLSTRNRAKAMQPNPPEHLTAKFRGECLKCHLPEKLAEMELQHKHPNKWRDDRVECTRCHKPPREAKALNLNARQINELATLLRRAN*
Ga0126372_133197311	3300010360	Tropical Forest Soil	PRDLIFIAIVIFVVGGLWWLSTRNKAKAMRPNPPEHLTAKFRDECLKCHTPEILAERELQHKHPNKWRDDRVECTRCHKTPQESNAQNLKARQISELADLLRRAN*
Ga0126377_100398972	3300010362	Tropical Forest Soil	MKMKFRDLIFIAIVLLVVGGLWWLSTRNKAKALLPTPPEHLTAKLRDDCLKCHLPETLAQMELQHKHPNKWRDERVECIRCHKPPQEANALNPNTRQINELAALLRRAN*
Ga0126377_101359212	3300010362	Tropical Forest Soil	MKPRDLIFIAIVIVVVGGLWWLSTRNKAKAMRPTPPEHLTAKLRDECLKCHLPEKLAELELQHKHPGKWRDARVECTRCHKTPQEANAQNPRASQIIELAGLLRRVN*
Ga0126377_104348552	3300010362	Tropical Forest Soil	MKMKFRDLIFIAIVILVVGGLWWLSTRNKAKAMLPAPPEHLTAKLRDDCLKCHIPETLAEMELQHKHPNKWRDERVECIRCHKPPQGANALKLNTRQISEFAALLWRAN*
Ga0126377_104803512	3300010362	Tropical Forest Soil	MRPLAYARGTVQGFACKNRISIKPGDHLMRVKSRDLIFIAIVIVVVGGLGWLSTRNNPKAMQPTPPEHLTAKFRGECLKCHLPEKLAEMELQHKHPNKWRDDRVECTRCHKPPREANALNLNARQINELATLLRRAN*
Ga0126377_111471482	3300010362	Tropical Forest Soil	MKMKSRDLIFIAIVILVVGGLWWLSTRNKAKAMLPTPPEHLTAKSRDDCLKCHLPKTLEEMELQHKHPNKWRDERVDCTRCHKPPREANAMNLNTRQIYELATLLRREN*
Ga0126377_115555671	3300010362	Tropical Forest Soil	MKMKSRDLIFIAIVILVVGGLWWLSTRNKAKAMRPTPPEHLTAKLRDDCLKCHLPDTLAQMELQHKHPNKWRDERVECTRCHKPPQEANALNLNARKISELAALLRRAN*
Ga0126377_125512411	3300010362	Tropical Forest Soil	MRVKSRDLIFIAIVLLVVGGLWWLSTRNKAKAMRPTPPEHLTAKLRDECLKCHIPEKLAEMELQHKHPNKWRDARVECTRCHKTPQGANALFLNA
Ga0126377_127447091	3300010362	Tropical Forest Soil	LKSRDLIFIAIVLFVVGGLWWLSTRNKAKAMLPTPPEHLTAKFRDECLKCHLPQTLEEMELQHKHPNKWRDTTIECTRCHKPPREANALNLNTRQISELAALLRRAN*
Ga0134124_103845701	3300010397	Terrestrial Soil	MKFKSRDLAFAAIVLFVIGGLWWLSTKNKAKPMLPYPPEHLTARSREDCLKCHLPSKMAEMELQHKHPGKWSDKRVECTRCHKPPQETKAQTLNALMVGDWASRMRRAN*
Ga0120192_100276841	3300012021	Terrestrial	MKVKSRDLIFIAIVLLVVGGLWWLSTRNKAKAMRPTPPEHLTAKLRDECLKCHLPETLAEMELQHKHPNKWRDERVECTRCHKTPQGANALYLNTRQFNELATLLRRAN*
Ga0154003_10004842	3300012081	Attine Ant Fungus Gardens	MKMKSRDLIFIAIVVLVVGGLWWLSTRNKAKAMSPAPPEHLTAKLRDECLKCHLPEKLAEMELQHKHPGKWRDPKVECTRCHKPPKEANALNLNARQINELVALLRRAN*
Ga0154003_10028046	3300012081	Attine Ant Fungus Gardens	MKMKSRDLIFIAIVILVVGGLWWLSTRNKAKALRPAPPEHLTAKLRDECLKCHLPETLTEMELQHKHPNKWRDERVECTRCHKPPQEANALNLNTRQINELATLLRRPY*
Ga0154003_10386022	3300012081	Attine Ant Fungus Gardens	MKMKSRDLFFIAIVVFVVGGLGWLSTRNKAKAMRPAPPEHLTAKLRDECLKCHLPTTLEEMELQHKHPGKWRDARVECTRCHKPPKEANALNLNAGQIKELVAILRRAN*
Ga0137374_103363032	3300012204	Vadose Zone Soil	MKMKSRDLIFIAIVVLVVGGLWWLSTRNKAKAMRPTPPEHLSAKSRDDCLKCHLPQTLEEMELQHKHPNKWRDARVECTRCHKPPQGANALNLNTGQISELAVLLLRAN*
Ga0137410_100119255	3300012944	Vadose Zone Soil	MKVKSRDLIFIAIVILVVGGLGWLSTRNKAKVMLPTPPEHLTAKLRDECLKCHLPEKLAEMELQHKHPIKWRDNRVECTRCHKPPREATALNLNTRQINKLATLRRRAN*
Ga0126375_101247311	3300012948	Tropical Forest Soil	MKMKSRDLIFIAIVILVVGGLWWLSTRNKAKAMLPAPPEHLTAKLRDDCLKCHIPETLAEMELQHKHPNKWRDERVECIRCHKPPQGANALKLNTRQISEFAALLWRAN*
Ga0126375_101976652	3300012948	Tropical Forest Soil	MKMKSRDLIFIAIVVLVVGGLWWLSTRNKAKAMRPTPPEHLTAKLRDDCLKCHLPDTLAQMELQHKHPNKWRDERVECTRCHKPPREANAMNLNTRQINELATLLRRAN*
Ga0126369_101128862	3300012971	Tropical Forest Soil	MKLKSRDLIFIAIVILVVGGLWWLSTRNKAKSMRPTPPEHLTAKLRDDCLKCHLPETLAQMEIQHKHPNKWRDEAVECTRCHKPPQEANALDLNTRQISELATLLRRAN*
Ga0132258_105653863	3300015371	Arabidopsis Rhizosphere	MKVKSRDLIFIAIVIAVVGGLAWLSTRNKAKSMTPTPPEHLTAKQRDECLKCHLPAKLAEMELQHKHPIKWRDERVKCTLCHKPPREATALKLNSRRINELASLLRRELRQSRIED*
Ga0190270_1000326510	3300018469	Soil	MKMKSRDMIFIAIVVLVVGGLWWLSTRNKAKAMSPAPPEHLTAKLRDECLKCHTPTTLEEMELQHKHPGKWRDAHVECTRCHKPPKEANALNLNAGQINELVAMLRRAN
Ga0187894_1000283414	3300019360	Microbial Mat On Rocks	MNLKSRDLFFIAIVIVVVGGLWWLSTRNKAKAMRPTPPEHLTAKLRGECLKCHLPETLAEWELQHKHPGKWRDERVECTRCHKPPQEANAQNLNTRRIDEFAGLLRRAK
Ga0187894_100147344	3300019360	Microbial Mat On Rocks	MKLKPRDLIFMAIVIFVVGGLWWLSTRNKAKAMLPNPPEHLTAKSRDECLKCHLPEKLAELELQHKHPNKWRDERVECTRCHKPPREANAQNPNTRRINELATLLRRAN
Ga0187892_100118632	3300019458	Bio-Ooze	MKLKSRDLIFIAIVAVVVGGLWFLSTRNKAKPMPPNPPEHLTAKSRQECFQCHLPAKFAELELQHKHPGKWRDERVSCLLCHPAPPRATAQNFNSLKTQAATQAQRAHRYLRRITD
Ga0187893_100706874	3300019487	Microbial Mat On Rocks	MKLKSRDLIFIAIVAVVVGGLWFLSTRNKAKPMPPNPPEHLTAKSREECFQCHLPAKFAELELQHKHPGKWRDDRVSCLLCHPAPARATARNFNALKTQAATQTQRAHRYLRRIMD
Ga0210102_10111192	3300025971	Natural And Restored Wetlands	MKLKSRDLIFIAIVAVVVGGLWFLSTRNKAKAMPPNPPEHLTAKSREECFQCHLPAKFAELELQHKHPGKWRDERVSCLLCHPAPSRATAQNLNSLKTPVATQAQRAHRYLRRVTD
Ga0209814_104212001	3300027873	Populus Rhizosphere	MKMKSRDLIFIAIVLLVVGGLWWLSTRNKAKAMSPAPPEHLTAKLRDECLKCHLPTTLEEMELQHKHPNKWRDARVECTRCHKPPKEANALNLNAGQIKELVAMLRRAN
Ga0207428_108647171	3300027907	Populus Rhizosphere	MKLKSRDLIFIAIVILVVGGLWWLSTRNKAKAMRPTPPEHLTAKSRDDCFKCHLPITLEEMELQHKHPNKWRDERVDCTRCHKPPREANAMNLNTWQINELATLLRREN
Ga0209382_100430761	3300027909	Populus Rhizosphere	MKMKSRDLIFIAIVVLVVGGLWWLSTRNKAKAMLPTPPEHLTAKLRDDCLKCHLPETLAQMELQHKHPNKWRDERVECTRCHKPPQEANALNLNTRQIAEFASLLRRAY
Ga0209382_100677735	3300027909	Populus Rhizosphere	MKLKSRDLFFIAIVVLVVGGLWWLSTRNKAKAMRPAPPEHLTAKLRDECLKCHLPEKLAEMELQNKHPGKWRDPKVECTRCHKPPKEANALNLNARQINELVALLRRAN
Ga0209382_101972222	3300027909	Populus Rhizosphere	MKMKSRDVIFIAIVVLVVGGLWWLSTRNKAKAMSPAPPEHLTAKLRDECLKCHLPEQLAEMERQNKHPGKWRDAHVECTRCHKPPKEANALNLNAGEINELVAMLRRAN
Ga0209382_121058331	3300027909	Populus Rhizosphere	MVFIAIVVLVVGGLWWLSTRNKAKAMSPAPPEHLTAKLRDECLKCHTPKTLEEMELQHKHPNKWRDTRVECTRCHKPPKEANALNLNAGQIKELVAMLRRAN
Ga0247727_100325713	3300031576	Biofilm	MKLKSRDLIFIAIVVVVVGGLWWLSTRNKAKAMPPNPPEHLTVRARKDCLECHKPATFEELELQHKHPGKWRDERVSCLLCHSAPQGAKAQISNPGKFQISHLKSQIHYGNTKSKTER
Ga0310900_105228692	3300031908	Soil	MKMKSRDMIFIAIVVFVVGGLLWLSTRNKAKAMSPAPPEHLTAKLRDECLKCHDARVECTRCHKPPKEANALNLNAGQINELVAMLRRAN
Ga0310890_112617441	3300032075	Soil	VVGGLWWLSTRNKAKAMSPAPPEHLTAKLRDECLKCHLPEKLAEMERQNKHPGKWRDAHIECTRCHKPPKEANALNLNAGQINELVAMLRRAY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F101447

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences