Metagenome Family F101441

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F101441
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	78 residues
Representative Sequence	MDKKLVGLLGLIVLFVFTLLYWTRFQVVDVHAMNGVGFYKINRLTGETVLVSGLDQIRILPVKDLEQPMLQLPAAPGKGQQ
Number of Associated Samples	79
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	74.51 %
% of genes near scaffold ends (potentially truncated)	34.31 %
% of genes from short scaffolds (< 2000 bps)	81.37 %
Associated GOLD sequencing projects	60
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (51.961 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (22.549 % of family members)
Environment Ontology (ENVO)	Unclassified (33.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Sediment (non-saline) (36.275 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 24.69% β-sheet: 25.93% Coil/Unstructured: 49.38%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF03843	Slp	39.22
PF02608	Bmp	19.61
PF01476	LysM	2.94
PF03734	YkuD	1.96
PF07085	DRTGG	0.98
PF13624	SurA_N_3	0.98
PF13426	PAS_9	0.98
PF13371	TPR_9	0.98
PF00112	Peptidase_C1	0.98
PF00005	ABC_tran	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG3065	Starvation-inducible outer membrane lipoprotein Slp	Cell wall/membrane/envelope biogenesis [M]	39.22
COG1744	Lipoprotein Med, regulator of KinD/Spo0A, PBP1-ABC superfamily, includes NupN	Signal transduction mechanisms [T]	19.61
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	1.96
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	1.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.94 %
Unclassified	root	N/A	47.06 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.94 %
Unclassified	root	N/A	47.06 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	51.96 %
Unclassified	root	N/A	47.06 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.06 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	16.67 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.98 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.06 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	13.73 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.96 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.98 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.06 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	13.73 %
Oceanospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales	1.96 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.98 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.06 %
Syntrophobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales	4.90 %
Hahellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Hahellaceae	1.96 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.98 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.06 %
Syntrophaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae	3.92 %
Hahella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Hahellaceae → Hahella	1.96 %
Peptococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae	0.98 %
Protostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.06 %
Syntrophus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus	2.94 %
unclassified Hahella	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Hahellaceae → Hahella → unclassified Hahella	1.96 %
Ecdysozoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa	0.98 %
Peptococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.06 %
Syntrophus gentianae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → Syntrophus gentianae	2.94 %
Hahella sp. CCB-MM4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Hahellaceae → Hahella → unclassified Hahella → Hahella sp. CCB-MM4	1.96 %
Panarthropoda	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda	0.98 %
Peptococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.06 %
Syntrophus gentianae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → Syntrophus gentianae	2.94 %
Hahella sp. CCB-MM4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Hahellaceae → Hahella → unclassified Hahella → Hahella sp. CCB-MM4	1.96 %
Arthropoda	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda	0.98 %
Peptococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.06 %
Syntrophus gentianae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → Syntrophus gentianae	2.94 %
Hahella sp. CCB-MM4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Hahellaceae → Hahella → unclassified Hahella → Hahella sp. CCB-MM4	1.96 %
Mandibulata	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata	0.98 %
Peptococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.06 %
Syntrophus gentianae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → Syntrophus gentianae	2.94 %
Hahella sp. CCB-MM4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Hahellaceae → Hahella → unclassified Hahella → Hahella sp. CCB-MM4	1.96 %
Pancrustacea	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea	0.98 %
Peptococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.06 %
Syntrophus gentianae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → Syntrophus gentianae	2.94 %
Hahella sp. CCB-MM4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Hahellaceae → Hahella → unclassified Hahella → Hahella sp. CCB-MM4	1.96 %
Hexapoda	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda	0.98 %
Peptococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.06 %
Syntrophus gentianae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → Syntrophus gentianae	2.94 %
Hahella sp. CCB-MM4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Hahellaceae → Hahella → unclassified Hahella → Hahella sp. CCB-MM4	1.96 %
Insecta	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta	0.98 %
Peptococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.06 %
Syntrophus gentianae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → Syntrophus gentianae	2.94 %
Hahella sp. CCB-MM4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Hahellaceae → Hahella → unclassified Hahella → Hahella sp. CCB-MM4	1.96 %
Dicondylia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia	0.98 %
Peptococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.06 %
Syntrophus gentianae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → Syntrophus gentianae	2.94 %
Hahella sp. CCB-MM4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Hahellaceae → Hahella → unclassified Hahella → Hahella sp. CCB-MM4	1.96 %
Pterygota	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota	0.98 %
Peptococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.06 %
Syntrophus gentianae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → Syntrophus gentianae	2.94 %
Hahella sp. CCB-MM4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Hahellaceae → Hahella → unclassified Hahella → Hahella sp. CCB-MM4	1.96 %
Neoptera	infraclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera	0.98 %
Peptococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.06 %
Syntrophus gentianae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → Syntrophus gentianae	2.94 %
Hahella sp. CCB-MM4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Hahellaceae → Hahella → unclassified Hahella → Hahella sp. CCB-MM4	1.96 %
Endopterygota	cohort	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota	0.98 %
Peptococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.06 %
Syntrophus gentianae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → Syntrophus gentianae	2.94 %
Hahella sp. CCB-MM4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Hahellaceae → Hahella → unclassified Hahella → Hahella sp. CCB-MM4	1.96 %
Coleoptera	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Coleoptera	0.98 %
Peptococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.06 %
Syntrophus gentianae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → Syntrophus gentianae	2.94 %
Hahella sp. CCB-MM4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Hahellaceae → Hahella → unclassified Hahella → Hahella sp. CCB-MM4	1.96 %
Polyphaga	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Coleoptera → Polyphaga	0.98 %
Peptococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.06 %
Syntrophus gentianae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → Syntrophus gentianae	2.94 %
Hahella sp. CCB-MM4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Hahellaceae → Hahella → unclassified Hahella → Hahella sp. CCB-MM4	1.96 %
Cucujiformia	infraorder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Coleoptera → Polyphaga → Cucujiformia	0.98 %
Peptococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.06 %
Syntrophus gentianae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → Syntrophus gentianae	2.94 %
Hahella sp. CCB-MM4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Hahellaceae → Hahella → unclassified Hahella → Hahella sp. CCB-MM4	1.96 %
Curculionoidea	superfamily	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Coleoptera → Polyphaga → Cucujiformia → Curculionoidea	0.98 %
Peptococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.06 %
Syntrophus gentianae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → Syntrophus gentianae	2.94 %
Hahella sp. CCB-MM4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Hahellaceae → Hahella → unclassified Hahella → Hahella sp. CCB-MM4	1.96 %
Curculionidae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Coleoptera → Polyphaga → Cucujiformia → Curculionoidea → Curculionidae	0.98 %
Peptococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.06 %
Syntrophus gentianae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → Syntrophus gentianae	2.94 %
Hahella sp. CCB-MM4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Hahellaceae → Hahella → unclassified Hahella → Hahella sp. CCB-MM4	1.96 %
Entiminae	subfamily	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Coleoptera → Polyphaga → Cucujiformia → Curculionoidea → Curculionidae → Entiminae	0.98 %
Peptococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.06 %
Syntrophus gentianae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → Syntrophus gentianae	2.94 %
Hahella sp. CCB-MM4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Hahellaceae → Hahella → unclassified Hahella → Hahella sp. CCB-MM4	1.96 %
Celeuthetini	tribe	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Coleoptera → Polyphaga → Cucujiformia → Curculionoidea → Curculionidae → Entiminae → Celeuthetini	0.98 %
Peptococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.06 %
Syntrophus gentianae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → Syntrophus gentianae	2.94 %
Hahella sp. CCB-MM4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Hahellaceae → Hahella → unclassified Hahella → Hahella sp. CCB-MM4	1.96 %
Syntrophus	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Coleoptera → Polyphaga → Cucujiformia → Curculionoidea → Curculionidae → Entiminae → Celeuthetini → Syntrophus	0.98 %
Peptococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000032\|Draft_c0007372	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	16426	Open in IMG/M
3300000032\|Draft_c0111031	All Organisms → cellular organisms → Bacteria	1858	Open in IMG/M
3300000313\|WSSedB1CaDRAFT_10065089	Not Available	689	Open in IMG/M
3300001279\|JGI20214J14112_1060869	Not Available	598	Open in IMG/M
3300001281\|JGI20213J14113_1050603	Not Available	562	Open in IMG/M
3300002961\|JGI11641J44799_10006571	All Organisms → cellular organisms → Bacteria	3530	Open in IMG/M
3300003432\|JGI20214J51088_10034667	All Organisms → cellular organisms → Bacteria	3485	Open in IMG/M
3300003432\|JGI20214J51088_11114441	Not Available	519	Open in IMG/M
3300003858\|Ga0031656_10170449	Not Available	755	Open in IMG/M
3300003860\|Ga0031658_1034349	Not Available	862	Open in IMG/M
3300003861\|Ga0031654_10235960	Not Available	527	Open in IMG/M
3300003910\|JGI26437J51864_10010090	All Organisms → cellular organisms → Bacteria	2072	Open in IMG/M
3300003910\|JGI26437J51864_10045498	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300004072\|Ga0055512_10009175	Not Available	1247	Open in IMG/M
3300004079\|Ga0055514_10077861	All Organisms → cellular organisms → Bacteria	787	Open in IMG/M
3300004151\|Ga0066602_10087844	Not Available	1300	Open in IMG/M
3300004155\|Ga0066600_10127202	Not Available	1030	Open in IMG/M
3300004241\|Ga0066604_10130847	All Organisms → cellular organisms → Bacteria	997	Open in IMG/M
3300004242\|Ga0066601_10163722	Not Available	833	Open in IMG/M
3300005144\|Ga0068711_1034455	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1252	Open in IMG/M
3300005219\|Ga0069004_10148376	Not Available	664	Open in IMG/M
3300006224\|Ga0079037_100022319	All Organisms → cellular organisms → Bacteria	4492	Open in IMG/M
3300006930\|Ga0079303_10249160	Not Available	722	Open in IMG/M
3300006930\|Ga0079303_10269873	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300009053\|Ga0105095_10282245	All Organisms → cellular organisms → Bacteria	912	Open in IMG/M
3300009078\|Ga0105106_10020606	All Organisms → cellular organisms → Bacteria	4854	Open in IMG/M
3300009081\|Ga0105098_10002172	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae	7049	Open in IMG/M
3300009081\|Ga0105098_10002417	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → Syntrophus gentianae	6716	Open in IMG/M
3300009087\|Ga0105107_10360658	Not Available	1013	Open in IMG/M
3300009091\|Ga0102851_10051036	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae	3324	Open in IMG/M
3300009091\|Ga0102851_11690011	Not Available	711	Open in IMG/M
3300009111\|Ga0115026_10516995	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300009120\|Ga0117941_1115656	Not Available	734	Open in IMG/M
3300009146\|Ga0105091_10134527	All Organisms → cellular organisms → Bacteria	1151	Open in IMG/M
3300009153\|Ga0105094_10572652	Not Available	658	Open in IMG/M
3300009167\|Ga0113563_10957979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Hahellaceae → Hahella → unclassified Hahella → Hahella sp. CCB-MM4	982	Open in IMG/M
3300009169\|Ga0105097_10201234	All Organisms → cellular organisms → Bacteria	1097	Open in IMG/M
3300014300\|Ga0075321_1137390	Not Available	527	Open in IMG/M
3300024056\|Ga0124853_1423772	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1762	Open in IMG/M
3300025692\|Ga0209744_1124027	All Organisms → cellular organisms → Bacteria	862	Open in IMG/M
3300025739\|Ga0209745_1018512	All Organisms → cellular organisms → Bacteria	2984	Open in IMG/M
3300025963\|Ga0210146_1002071	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → Syntrophus gentianae	1882	Open in IMG/M
3300025967\|Ga0210136_1016280	Not Available	924	Open in IMG/M
3300025978\|Ga0210092_1001567	All Organisms → cellular organisms → Bacteria	2600	Open in IMG/M
3300025980\|Ga0210137_1018979	All Organisms → cellular organisms → Bacteria	874	Open in IMG/M
3300026026\|Ga0210129_1086927	Not Available	625	Open in IMG/M
3300026353\|Ga0256818_1018920	Not Available	631	Open in IMG/M
3300027051\|Ga0209269_1028219	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1141	Open in IMG/M
3300027675\|Ga0209077_1097542	Not Available	813	Open in IMG/M
3300027715\|Ga0208665_10045804	Not Available	1264	Open in IMG/M
3300027721\|Ga0209492_1168294	Not Available	760	Open in IMG/M
3300027731\|Ga0209592_1095983	All Organisms → cellular organisms → Bacteria	1084	Open in IMG/M
3300027739\|Ga0209575_10350127	Not Available	504	Open in IMG/M
3300027792\|Ga0209287_10054641	All Organisms → cellular organisms → Bacteria	1466	Open in IMG/M
3300027796\|Ga0209373_10076365	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1586	Open in IMG/M
3300027841\|Ga0209262_10165363	Not Available	1064	Open in IMG/M
3300027877\|Ga0209293_10026565	All Organisms → cellular organisms → Bacteria	2152	Open in IMG/M
3300027885\|Ga0209450_10176407	All Organisms → cellular organisms → Bacteria	1495	Open in IMG/M
3300027885\|Ga0209450_10262806	All Organisms → cellular organisms → Bacteria	1238	Open in IMG/M
3300027897\|Ga0209254_10109406	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2308	Open in IMG/M
3300027897\|Ga0209254_10662485	Not Available	726	Open in IMG/M
3300027899\|Ga0209668_10162457	All Organisms → cellular organisms → Bacteria	1364	Open in IMG/M
3300027899\|Ga0209668_10162603	All Organisms → cellular organisms → Bacteria	1364	Open in IMG/M
3300027899\|Ga0209668_10727034	Not Available	667	Open in IMG/M
3300027899\|Ga0209668_11110593	Not Available	532	Open in IMG/M
3300027902\|Ga0209048_10016239	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales	6544	Open in IMG/M
3300027902\|Ga0209048_10083959	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2487	Open in IMG/M
3300027902\|Ga0209048_10195494	Not Available	1475	Open in IMG/M
3300031997\|Ga0315278_11297965	Not Available	709	Open in IMG/M
3300032143\|Ga0315292_10039473	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3428	Open in IMG/M
3300032143\|Ga0315292_11186936	Not Available	628	Open in IMG/M
3300032143\|Ga0315292_11314005	Not Available	591	Open in IMG/M
3300032397\|Ga0315287_10066533	All Organisms → cellular organisms → Bacteria	4009	Open in IMG/M
3300033406\|Ga0316604_10540822	Not Available	641	Open in IMG/M
3300033408\|Ga0316605_10180959	All Organisms → cellular organisms → Bacteria → Proteobacteria	1751	Open in IMG/M
3300033408\|Ga0316605_10313677	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → Syntrophus gentianae	1381	Open in IMG/M
3300033408\|Ga0316605_10709767	Not Available	949	Open in IMG/M
3300033413\|Ga0316603_11152409	Not Available	734	Open in IMG/M
3300033413\|Ga0316603_11217496	Not Available	713	Open in IMG/M
3300033414\|Ga0316619_10830238	Not Available	792	Open in IMG/M
3300033416\|Ga0316622_102647500	Not Available	576	Open in IMG/M
3300033418\|Ga0316625_101394530	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300033419\|Ga0316601_101169156	Not Available	771	Open in IMG/M
3300033419\|Ga0316601_101314834	Not Available	726	Open in IMG/M
3300033434\|Ga0316613_10613680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Hahellaceae → Hahella → unclassified Hahella → Hahella sp. CCB-MM4	743	Open in IMG/M
3300033434\|Ga0316613_10906386	Not Available	606	Open in IMG/M
3300033480\|Ga0316620_10817569	Not Available	895	Open in IMG/M
3300033480\|Ga0316620_11831763	Not Available	602	Open in IMG/M
3300033481\|Ga0316600_10334502	Not Available	1027	Open in IMG/M
3300033483\|Ga0316629_11115525	Not Available	626	Open in IMG/M
3300033487\|Ga0316630_10467965	Not Available	1024	Open in IMG/M
3300033487\|Ga0316630_10913204	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300033513\|Ga0316628_100498537	All Organisms → cellular organisms → Bacteria	1570	Open in IMG/M
3300033521\|Ga0316616_100256549	All Organisms → cellular organisms → Bacteria	1807	Open in IMG/M
3300033557\|Ga0316617_100020615	All Organisms → cellular organisms → Bacteria	3433	Open in IMG/M
3300033557\|Ga0316617_100368724	All Organisms → cellular organisms → Bacteria	1251	Open in IMG/M
3300034123\|Ga0370479_0020337	All Organisms → cellular organisms → Bacteria	1545	Open in IMG/M
3300034126\|Ga0370486_025888	Not Available	1329	Open in IMG/M
3300034128\|Ga0370490_0011397	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3044	Open in IMG/M
3300034156\|Ga0370502_0057439	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Coleoptera → Polyphaga → Cucujiformia → Curculionoidea → Curculionidae → Entiminae → Celeuthetini → Syntrophus	1226	Open in IMG/M
3300034158\|Ga0370507_0123055	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300034281\|Ga0370481_0072950	All Organisms → cellular organisms → Bacteria	1120	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.08%
Engineered	Engineered	3.92%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	60.78%
Terrestrial	Environmental → Terrestrial	35.29%
Lab Enrichment	Engineered → Lab Enrichment	3.92%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	47.06%
Soil	Environmental → Terrestrial → Soil	32.35%
Marine	Environmental → Aquatic → Marine	12.75%
Defined Media	Engineered → Lab Enrichment → Defined Media	3.92%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	2.94%
Sediment	Environmental → Aquatic → Sediment	0.98%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	30.39%
Lentic	Environmental → Aquatic → Freshwater → Lentic	15.69%
Sediment	Environmental → Aquatic → Freshwater → Sediment	13.73%
Wetlands	Environmental → Aquatic → Marine → Wetlands	12.75%
Pond	Environmental → Aquatic → Freshwater → Pond	6.86%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.88%
Lake	Environmental → Aquatic → Freshwater → Lake	4.90%
Anaerobic Media	Engineered → Lab Enrichment → Defined Media → Anaerobic Media	3.92%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	2.94%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	1.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	30.39%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	15.69%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	13.73%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	6.86%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	6.86%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	5.88%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	4.90%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	4.90%
Unclassified	Engineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified	3.92%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	2.94%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.96%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.98%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	22.55%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	15.69%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	11.76%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	6.86%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	6.86%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	5.88%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	5.88%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	4.90%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	4.90%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	2.94%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	1.96%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.96%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.96%
Hydrocarbon Resource Environments	Engineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified → Hydrocarbon Resource Environments	1.96%
Enrichment Culture	Engineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified → Enrichment Culture	1.96%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	0.98%
Lake Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Lake Sediment	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000032	Oil sands microbial community from Northern Alberta which degrade Naphthaline	Engineered	Open in IMG/M
3300000313	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site B1 Cattail	Environmental	Open in IMG/M
3300001279	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300001281	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site A1 Bulk	Environmental	Open in IMG/M
3300002961	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site A1 Bulk	Environmental	Open in IMG/M
3300003432	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300003858	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI	Environmental	Open in IMG/M
3300003860	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL	Environmental	Open in IMG/M
3300003861	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR	Environmental	Open in IMG/M
3300003910	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW	Environmental	Open in IMG/M
3300004072	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_TuleA_D2	Environmental	Open in IMG/M
3300004079	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_TuleC_D2	Environmental	Open in IMG/M
3300004151	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 5	Environmental	Open in IMG/M
3300004155	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Low cellulose week 11	Environmental	Open in IMG/M
3300004241	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 11	Environmental	Open in IMG/M
3300004242	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Medium cellulose week 11	Environmental	Open in IMG/M
3300005144	Enrichment culture microbial communities from Arthur Kill intertidal strait, New Jersey, USA, that are MTBE-degrading - MTBE-AKM (Arthur Kill Methanogenic) MetaG	Engineered	Open in IMG/M
3300005219	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailB_D2	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300006930	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC	Environmental	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009087	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009120	Lake sediment microbial communities from Tanners Lake, St. Paul, MN	Environmental	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009153	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009169	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300014300	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D1	Environmental	Open in IMG/M
3300024056	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300025692	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-311 (SPAdes)	Environmental	Open in IMG/M
3300025739	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-312 (SPAdes)	Environmental	Open in IMG/M
3300025963	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_TuleA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025967	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025978	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_TuleB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025980	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_TuleC_D2 (SPAdes)	Environmental	Open in IMG/M
3300026026	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailB_D2 (SPAdes)	Environmental	Open in IMG/M
3300026353	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 7-17 PR4	Environmental	Open in IMG/M
3300027051	Enrichment culture microbial communities from Arthur Kill intertidal strait, New Jersey, USA, that are MTBE-degrading - MTBE-AKM (Arthur Kill Methanogenic) MetaG (SPAdes)	Engineered	Open in IMG/M
3300027675	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027715	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC (SPAdes)	Environmental	Open in IMG/M
3300027721	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027731	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027739	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Medium cellulose week 11 (SPAdes)	Environmental	Open in IMG/M
3300027792	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027796	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 5 (SPAdes)	Environmental	Open in IMG/M
3300027841	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Low cellulose week 11 (SPAdes)	Environmental	Open in IMG/M
3300027877	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027885	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW (SPAdes)	Environmental	Open in IMG/M
3300027897	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes)	Environmental	Open in IMG/M
3300027899	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032143	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300033406	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_CT	Environmental	Open in IMG/M
3300033408	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033414	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_B	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300033418	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_A	Environmental	Open in IMG/M
3300033419	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT	Environmental	Open in IMG/M
3300033434	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_CT_b	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033481	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_CT	Environmental	Open in IMG/M
3300033483	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_A	Environmental	Open in IMG/M
3300033487	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_A	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M
3300034123	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_01D_15	Environmental	Open in IMG/M
3300034126	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_02D_16	Environmental	Open in IMG/M
3300034128	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_06D_16	Environmental	Open in IMG/M
3300034156	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_01D_18	Environmental	Open in IMG/M
3300034158	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_06D_18	Environmental	Open in IMG/M
3300034281	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_03D_15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Draft_00073725	3300000032	Hydrocarbon Resource Environments	MDKKFIGLLTLIVLFVFTLLYWTRFQVIDVHAMNGVGFYKINRLTGETVLVSGLDQIRIMPVKDLEQPQLQFPAPGKGQ*
Draft_01110312	3300000032	Hydrocarbon Resource Environments	MDKKIIVIVGFVVLFVFTLLYWTRFQVVDVHAMNGVGFYKINRLTGETVLVSGLDQIRIMPVKDLDQPSLQFPAPGKGQQ*
WSSedB1CaDRAFT_100650892	3300000313	Wetland	MEKKIIVIVGLVVLFVLTMLYWTRFQVIDVHAMNGVGFYKINRLTGETVLVSGVDQIRIMPVKDLEQPLMQLPAPGKAQQ*
JGI20214J14112_10608691	3300001279	Wetland	MDKKFIGLLALTVLFVVTLLYWTRFQVVDVHAINGVGFYKINRLTGETVLVSGLDQIRILPVKDLEQPML
JGI20213J14113_10506032	3300001281	Wetland	MDKKFIGLLALTVLFVVTLLYWTRFQVVDVHAINGVGFYKINRLTGETVLVSGLDQIRILPVKDLEQP
JGI11641J44799_100065713	3300002961	Wetland	MDKKFIGLLALTVLFVVTLLYWTRFQVVDVHAINGVGFYKINRLTGETVLVSGLDQIRILPVKDLEQPMLQLPAAPGKGQQ*
JGI20214J51088_100346674	3300003432	Wetland	MEKKFVVVIGLIVFFFFTLLYWTRFQVIDVHAMNGVGFYKINRLTGETVLVSGLDQIRILPVKDLDQPLLQLPAPGKAQQ*
JGI20214J51088_111144411	3300003432	Wetland	MDKKIITLAALIVLFVFTLLYWTRFQVIDVHAMNGVGFYKINRLTGETVLVSGLDQIRVLPVKDLEQPQLQLPVPGKGQ*
Ga0031656_101704491	3300003858	Freshwater Lake Sediment	MDKKFVVMIALVALFILTLLYWTRFQVIDVHAMNGVGFYKINRLTGETVLVSGLDQIRIMPVKDLEQPQLQFPAPGKGQ*
Ga0031658_10343491	3300003860	Freshwater Lake Sediment	MDKKWVCLLGLIVLFLFTLLYWTRFQVVDVHAMNGVGFYKINRLTGETVLVSGLDQIRILPVKDLDQPMLQLPASPG
Ga0031654_102359601	3300003861	Freshwater Lake Sediment	MDKKLVGLLGLIVIFVFTLLYWTRFQVIDVHAMNGVGFYKINRLTGETVLVSGLDQIRIMPVKDLEQPMLQLPAAPGKG
JGI26437J51864_100100902	3300003910	Freshwater Lake Sediment	MDKKFIGLLALTVLFVVTLLYWTRFQVVDVHAMNGVGFYKINRLTGETVLVSGLDQIRILPVKDLEQPMLQLPAAPGKGQQ*
JGI26437J51864_100454981	3300003910	Freshwater Lake Sediment	MDKKLVCLLGLIVLFLFTLLYWTRFQVVDVHAMNGVGFYKINRLTGETVLVSGLDQIRILPVKDLDQPMLQLPAAPGKGQQ*
Ga0055512_100091752	3300004072	Natural And Restored Wetlands	MEKKFIIVTGLLVLFVFTLLYWTRFQVIDVHAMNGVGFYKINRLTGETVLVSGLDQIRLMPVKDLEQPSLQLPVPGKAQQ*
Ga0055514_100778611	3300004079	Natural And Restored Wetlands	KFIIVTGLLVLFVFTLLYWTRFQVIDVHAMNGVGFYKINRLTGETVLVSGLDQIRLMPVKDLEQPSLQLPVPGKAQQ*
Ga0066602_100878441	3300004151	Freshwater	VDKKIIIAVALVALFVVTLLYWTRFQVVDVHAMNGVGFYKINRLTGETVLVSGLDQIRILPVKDLDQPMLQLPAAPGKGQQ*
Ga0066600_101272022	3300004155	Freshwater	MDKKFVVMIALVALFILTLLYWTRFQVIDVHAMNGVGFYKINRLTGETVLVSGLDQIRIMPVKDLEQPMLQLPAAPGKGQQ*
Ga0066604_101308471	3300004241	Freshwater	KPVDKKIIIAVALVALFVVTLLYWTRFQVVDVHAMNGVGFYKINRLTGETVLVSGLDQIRILPVKDLEQPMLQLPAAPGKGQQ*
Ga0066601_101637222	3300004242	Freshwater	VDKKIIIAVALVALFVVTLLYWTRFQVVDVHAMNGVGFYKINRLTGETVLVSGLDQIRILPVKDLEQPMLQLPAAPGKGQQ*
Ga0068711_10344551	3300005144	Enrichment Culture	VDKKIISAVALIVLFVFTLLYWTRFQVIDVHAMNGVGFYKINRLTGETVLVSGLDQIRILPVKDLEQPSLQFPAPGKAQ*
Ga0069004_101483762	3300005219	Natural And Restored Wetlands	MEKKTVIVLGLVVLFFFTLLYWTRFQVIDVHAMNGVGFYKINRLTGETVLVSGLDQIRLMPVKDLEQP
Ga0079037_1000223193	3300006224	Freshwater Wetlands	MDKKMVGLLGLIVLFVFTLLYWTRFQVVDVHAMNGVGFYKINRLTGETVLVSGLDQIRILPVKDLEQPMLQLPAVPGKGQQ*
Ga0079303_102491602	3300006930	Deep Subsurface	MDKKLVGLLGLIVLFVFTLLYWTRFQVVDVHAMNGVGFYKINRLTGETVLVSGLDQIRILPVKDLEQPMLQLPAAPGKGQQ*
Ga0079303_102698731	3300006930	Deep Subsurface	FTLLYWTRFQVVDVHAMNGVGFYKINRLTGETVLVSGLDQIRILPVKDFEQPMLQLPAAPGKGQQ*
Ga0105095_102822452	3300009053	Freshwater Sediment	MEGEIFMDKKLVGLLGLIVLFVFTLLYWTRFQVVDVHAMNGVGFYKINRLTGETVLVSGLDQIRILPAKDLEQPMLQLPGAPGKGQQ*
Ga0105106_100206065	3300009078	Freshwater Sediment	MEGEIFMDKKFVVMIALVALFILTLLYWTRFQVIDVHAMNGVGFYKINRLTGETVLVSGLDQIRILPVKDLEQPMLQLPAPGKAQ*
Ga0105098_100021727	3300009081	Freshwater Sediment	FTLLYWTRFQVVDVHAMNGVGFYKINRLTGETVLVSGLDQIRILPAKDLEQPMLQLPGAPGKGQQ*
Ga0105098_100024171	3300009081	Freshwater Sediment	MEKKIIVIVGLVTLFVFTLLYWTRFQVVDVHAMNGVGFYKINRLTGETVLVSGLDQIRIMPVKDFEQPMLQLPAAPGKEQQ*
Ga0105107_103606583	3300009087	Freshwater Sediment	MEGEIFMDKKFVGLLGLIVLFVFTLLYWTRFQVIDVHAMNGVGFYKINRLTGETVLVSGLDQIRILPVKDLEQPMLQLPA
Ga0102851_100510364	3300009091	Freshwater Wetlands	MEGEIFMDKKMVGLLGLIVLFVFTLLYWTRFQVVDVHAMNGVGFYKINRLTGETVLVSGLDQIRILPVKDLEQPMLQLPAVPGKGQQ*
Ga0102851_116900112	3300009091	Freshwater Wetlands	MDKKLVCLLGLIVLFLFTLLYWTRFQVVDVHAMNGVGFYKINRLTGETVLVSGLDQIRIMPVKDIEQPMLQLPAAPGKVQQ*
Ga0115026_105169951	3300009111	Wetland	RMDKKWVCLLGLIVLFLFTLLYWTRFQVVDVHAMNGVGFYKINRLTGETVLVSGLDQIRILPVKDLEQPMLQLPAAPGKGQQ*
Ga0117941_11156561	3300009120	Lake Sediment	MDKKLVCLLGLIVLFLFTLLYWTRFQVVDVHAMNGVGFYKINRLTGETVLVSGLDQIRIMPVKDIEQPMLQ
Ga0105091_101345272	3300009146	Freshwater Sediment	MDKKLVGLLGLIVLFVFTLLYWTRFQVIDVHAMNGVGFYKINRLTGETVLVSGLDQIRIMPVKDLEQPQLQFPAPGKGQ*
Ga0105094_105726521	3300009153	Freshwater Sediment	MEKKIIVIVGLVTLFVFTLLYWTRFQVVDVHAMNGVGFYKINRLTGETVLVSGLDQIRILPAKDLEQPMLQLPGAPGKGQQ*
Ga0113563_109579792	3300009167	Freshwater Wetlands	MEGEIFMDKKLVGLLGLIVLFVFTLLYWTRFQVVDVHAMNGVGFYKINRLTGETVLVSGLDQIRILPVKDLEQPMLQLPAAPGKGQQ*
Ga0105097_102012341	3300009169	Freshwater Sediment	VFTLLYWTRFQVVDVHAMNGVGFYKINRLTGETVLVSGLDQIRILPAKDLEQPMLQLPGAPGKGQQ*
Ga0075321_11373901	3300014300	Natural And Restored Wetlands	DKKFIIVIGLIVLFVFTLLYWTRFQVIDVHAMNGVGFYKINRLTGETVLVSGLDQIRILPVKDFDQPMLQLPAAPGKGQQ*
Ga0124853_14237723	3300024056	Freshwater Wetlands	MDKKMVGLLGLIVLFVFTLLYWTRFQVVDVHAMNGVGFYKINRLTGETVLVSGLDQIRILPVKDLEQPMLQLPAVPGKGQQ
Ga0209744_11240272	3300025692	Arctic Peat Soil	VDKKIIACVALIVLFVVTLLYWTRFQVIDVHAMNGVGFYKINRLTGETVLVSGLDQIRILPVKDLEQPQLQFPAPGKGQQ
Ga0209745_10185125	3300025739	Arctic Peat Soil	VDKKIIACVALIVLFVVTLLYWTRFQVIDVHAMNGVGFYKINRLTGETVLVSGLDQIRILPVKDL
Ga0210146_10020713	3300025963	Natural And Restored Wetlands	MEKKFIIVTGLLVLFVFTLLYWTRFQVIDVHAMNGVGFYKINRLTGETVLVSGLDQIRLMPVKDLEQPSLQLPVPGKAQQ
Ga0210136_10162802	3300025967	Natural And Restored Wetlands	MEKKFIIVTGLLVLFVFTLLYWTRFQVIDVHAMNGVGFYKINRLTGETVLVSGLDQIRLMPVKDLE
Ga0210092_10015673	3300025978	Natural And Restored Wetlands	MDKKFIGLLALTVLFVVTLLYWTRFQVVDVHAINGVGFYKINRLTGETVLVSGLDQIRILPVKDLEQPMLQLPAAPGKGQQ
Ga0210137_10189792	3300025980	Natural And Restored Wetlands	KKFIIVTGLLVLFVFTLLYWTRFQVIDVHAMNGVGFYKINRLTGETVLVSGLDQIRLMPVKDLEQPSLQLPVPGKAQQ
Ga0210129_10869272	3300026026	Natural And Restored Wetlands	MDKKFIGLLALTVLFVVTLLYWTRFQVVDVHAINGVGFYKINRLTGETVLVSGLDQIRILPVKDLEQPMLQLP
Ga0256818_10189202	3300026353	Sediment	MDKKIVVVIGLIVLFVFTLFYWTRFQVIDVHAMNGVGFYKINRLTGETVLVSGLDQIRILPVKDLEQPQLQLPVPGKGQ
Ga0209269_10282191	3300027051	Enrichment Culture	VDKKIISAVALIVLFVFTLLYWTRFQVIDVHAMNGVGFYKINRLTGETVLVSGLDQIRILPVKDLEQPMLQLPAAPGKGQQ
Ga0209077_10975422	3300027675	Freshwater Sediment	MDKKLVGLLGLIVLFVFTLLYWTRFQVVDVHAMNGVGFYKINRLTGETVLVSGLDQIRILPAKDLEQPMLQLPGAPGKGQQ
Ga0208665_100458042	3300027715	Deep Subsurface	MDKKLVGLLGLIVLFVFTLLYWTRFQVVDVHAMNGVGFYKINRLTGETVLVSGLDQIRILPVKDLEQPMLQLPAAPGKGQQ
Ga0209492_11682942	3300027721	Freshwater Sediment	MDKKFIGLLGLIVLFVFTLLYWTRFQVVDVHAMNGVGFYKINRLTGETVLVSGLDQIRILPVKDLEQPMLQLPAAPGKGQQ
Ga0209592_10959832	3300027731	Freshwater Sediment	MEKKIIVIVGLVTLFVFTLLYWTRFQVVDVHAMNGVGFYKINRLTGETVLVSGLDQIRILPAKDLEQPMLQLPGAPGKGQQ
Ga0209575_103501272	3300027739	Freshwater	VDKKIIIAVALVALFVVTLLYWTRFQVVDVHAMNGVGFYKINRLTGETVLVSGLDQIRILPVKDLEQ
Ga0209287_100546412	3300027792	Freshwater Sediment	MDKKFVVMIALVALFILTLLYWTRFQVIDVHAMNGVGFYKINRLTGETVLVSGLDQIRILPVKDLEQPMLQLPAPGKAQ
Ga0209373_100763653	3300027796	Freshwater	VDKKIIIAVALVALFVVTLLYWTRFQVVDVHAMNGVGFYKINRLTGETVLVSGLDQIRILPVKDLEQPMLQLPAAPGKGQQ
Ga0209262_101653632	3300027841	Freshwater	MDKKFVVMIALVALFILTLLYWTRFQVIDVHAMNGVGFYKINRLTGETVLVSGLDQIRIMPVKDLEQPMLQLPAAPGKGQQ
Ga0209293_100265652	3300027877	Wetland	MDKKLVGLLGLIVLFVFTLLYWTRFQVVDVHAMNGVGFYKINRLTGETVLVSGLDQIRILPVKDLEQPMLQLPAVPGKGQQ
Ga0209450_101764072	3300027885	Freshwater Lake Sediment	GLLALTVLFVVTLLYWTRFQVVDVHAMNGVGFYKINRLTGETVLVSGLDQIRILPVKDLEQPMLQLPAAPGKGQQ
Ga0209450_102628062	3300027885	Freshwater Lake Sediment	MDKKLVCLLGLIVLFLFTLLYWTRFQVVDVHAMNGVGFYKINRLTGETVLVSGLDQIRILPVKDLDQPMLQLPAAPGKGQQ
Ga0209254_101094063	3300027897	Freshwater Lake Sediment	MDKKFVVMIALVALFILTLLYWTRFQVIDVHAMNGVGFYKINRLTGETVLVSGLDQIRIMPVKDLEQPQLQFPAPGKGQ
Ga0209254_106624851	3300027897	Freshwater Lake Sediment	MDKKFVGLLGLIVIFVFTLLYWTRFQVIDVHAMNGVGFYKINRLTGETVLVSGLDQIRIMPVKDLEQPQLQFPAPGKGQQ
Ga0209668_101624572	3300027899	Freshwater Lake Sediment	MDKKLVGLLGLIVLFVFTLLYWTRFQVVDVHAMNGVGFYKINRLTGETVLVSGLDQIRILPVKDLEQPMLQLPAAQGKAQ
Ga0209668_101626031	3300027899	Freshwater Lake Sediment	KKLVCLLGLVVLFLFTLLYWTRFQVVDVHAMNGVGFYKINRLTGETVLVSGLDQIRILPVKDLDQPMLQLPASPGKGQQ
Ga0209668_107270342	3300027899	Freshwater Lake Sediment	MDKKLVGLLGLIVLFVFTLLYWTRFQVIDVHAMNGVGFYKINRLTGETVLVSGLDQIRILPVKDLEQPMLQLPAAPGKGQQ
Ga0209668_111105931	3300027899	Freshwater Lake Sediment	LIVLFVFTLLYWTRFQVIDVHAMNGVGFYKINRLTGETVLVSGLDQIRILPVKDLEQPMLQLPAAPGKGQQ
Ga0209048_100162391	3300027902	Freshwater Lake Sediment	IVIGLIVLFVFTLLYWTRFQVIDVHAMNGVGFYKINRLTGETVLVSGLDQIRVLPVKDLEQPSLQLPTPGKAQ
Ga0209048_100839592	3300027902	Freshwater Lake Sediment	MDKKLVGLLGLIVIFVFTLLYWTRFQVIDVHAMNGVGFYKINRLTGETVLVSGLDQIRIMPVKDLEQPMLQLPAAPGKGQQ
Ga0209048_101954942	3300027902	Freshwater Lake Sediment	VDKKIIAAVALIVLFVFTLLYWTRFQVIDVHAMNGVGFYKINRLTGETVLVSGLDQIRILPVKDLEQPQLQFPAPGKGQQ
Ga0315278_112979652	3300031997	Sediment	MDKKFVVMIALVALFILTLLYWTRFQVIDVHAMNGVGFYKINRLTGETVLVSGLDQIRIMPVKDLEQSQLQF
Ga0315292_100394734	3300032143	Sediment	MDKKFVGLLGLIVIFVFTLLYWTRFQVIDVHAMNGVGFYKINRLTGETVLVSGLDQIRIMPVKDLEQPQLQFPAPGKGQ
Ga0315292_111869361	3300032143	Sediment	MDKKFVVMIALVALFILTLLYWTRFQVIDVHAMNGVGFYKINRLTGETVLVSGLDQIRIMPVKDLEQSQLQFPAPGKGQQ
Ga0315292_113140052	3300032143	Sediment	MDKKLVGLLALIVLFVFTLLYWTRFQVIDVHAMNGVGFYKINRLTGETVLVSGLDQIRIMPVKDLEQPQLQFPAPGKGQQ
Ga0315287_100665339	3300032397	Sediment	VNYIKKGIDGLNMKWFGTLGLIILLVFTLLYWTRFQVIDVHTMNGVGFYKINRLTGETILVSGLDQIRVLPVKDFEQPQLQFPAPSKGQQ
Ga0316604_105408222	3300033406	Soil	MDKKLVGLLGLIVLFAFTLLYWTRFQVVDVHAMNGVGFYKINRLTGETVLVSGLDQIRILPVKDFEQPMLQLPAAPGKGQQ
Ga0316605_101809593	3300033408	Soil	VDKKIIIVIGLIVLFALTLLYWTRFQVVDVHAMNGVGFYKINRLTGETVLVSGLDQIRILPVKDLEQPMLQLPAAPGKGQQ
Ga0316605_103136773	3300033408	Soil	VDKKIIIVIGLVVLFVFTLLYWTRFQVIDVHAMNGVGFYKINRLTGETVLVSGLDQIRIMPVKDLEQPQLQFPAPGKG
Ga0316605_107097672	3300033408	Soil	MDKKLVCLLGLIVLFLFTLLYWTRFQVVDVHAMNGVGFYKINRLTGETVLVSGLDQIRIMPVKDIEQPMLQLPAAPGKVQQ
Ga0316603_111524091	3300033413	Soil	VDKKIIIVIGLVVLFVFTLLYWTRFQVIDVHAMNGVGFYKINRLTGETVLVSGLDQIRIMPVKDLEQPQLQFPAPGKGQ
Ga0316603_112174962	3300033413	Soil	MDKKMVGLLGLIVLFVFTLLYWTRFQVVDVHAMNGVGFYKINRLTGETVLVSGLDQIRILPVKDLEQPMLQLPAAPGKGQ
Ga0316619_108302382	3300033414	Soil	VDKKIIIVIGLIVLFAFTLLYWTRFQVVDVHAMNGVGFYKINRLTGETVLVSGLDQIRILPVKDFEQPMLQLPAAPGKGQQ
Ga0316622_1026475002	3300033416	Soil	MDKKLVGLLGLIVLFVFTLLYWTRFQVVDVHAMNGVGFYKINRLTGETVLVSGLDQIRILPVKDLEQPMLQL
Ga0316625_1013945301	3300033418	Soil	LIVLFLFTLLYWTRFQVVDVHAMNGVGFYKINRLTGETVLVSGLDQIRILPVKDLDQPMLQLPASPGKGQQ
Ga0316601_1011691562	3300033419	Soil	MDKKMVGLLGLIVLFVFTLLYWTRFQVVDVHAMNGVGFYKINRLTGETVLVSGLDQIRILPVKDLDQPMLQLPAAPGKGQQ
Ga0316601_1013148342	3300033419	Soil	VDKKIIIVIGLVVLFVFTLLYWTRFQVIDVHAMNGVGFYKINRLTGETVLVSGLDQIRIMPVKDLEQPSLQFPAPGK
Ga0316613_106136802	3300033434	Soil	VDKKIIIVIGLVVLFVFTLLYWTRFQVIDVHAMNGVGFYKINRLTGETVLVSGLDQIRILPVKDLEQPMLQLPAAPGKGQQ
Ga0316613_109063862	3300033434	Soil	LLGLIVLFLFTLLYWTRFQVVDVHAMNGVGFYKINRLTGETVLVSGLDQIRIMPVKDIEQPMLQLPAAPGKVQQ
Ga0316620_108175692	3300033480	Soil	MDKKWIGLLALVVLFVFTLLYWTRFQVIDVHAMNGVGFYKINRLTGETVLVSGLDQIRLMPVKDLEQPPLQLPAPGKAQQ
Ga0316620_118317631	3300033480	Soil	MDKKFVVMIALVVLFVFTLLYWTRFQVIDVHAMNGVGFYKINRLTGETVLVSGLDQIRIMPVKDLEQPQLQFPAPGKGQ
Ga0316600_103345022	3300033481	Soil	VDKKIIIVIGLVVLFVFTLLYWTRFQVIDVHAMNGVGFYKINRLTGETVLVSGLDQIRIMPVKDLEQPQLQFPAPGKGQQ
Ga0316629_111155251	3300033483	Soil	MIALVVLFVFTLLYWTRFQVIDVHAMNGVGFYKINRLTGETVLVSGLDQIRIMPVKDLEQPQLQFPAPGKGQ
Ga0316630_104679653	3300033487	Soil	VDKKIIIVIGLVVLFVFTLLYWTRFQVIDVHAMNGVGFYKINRLTGETVLVSGLDQIRIIPVKDL
Ga0316630_109132041	3300033487	Soil	MDKKLVCLLGLIVLFLFTLLYWTRFQVVDVHAMNGVGFYKINRLTGETVLVSGLDQIRILPVKDLDQPMLQLPASPGKGQQ
Ga0316628_1004985372	3300033513	Soil	MDKKLVGLLGLIVLFAFTLLYWTRFQVVDVHSMNGVGFYKINRLTGETVLVSGLDQIRILPVKDFEQPMLQLPAAPGKGQQ
Ga0316616_1002565493	3300033521	Soil	MDKKLVCLLGLIVLFLFTLLYWTRFQVVDVHAMNGVGFYKINRLTGETVLVSGLDQIRIMPVKDIEQPMLQLPAAPGKGQQ
Ga0316617_1000206156	3300033557	Soil	MDKKIIVIVGLIVLFVFTLLYWTRFQVVDVHAMNGVGFYKINRLTGETVLVSGLDQIRIMPVKDIEQPMLQLPAAPGKGQQ
Ga0316617_1003687241	3300033557	Soil	DMEGEIFMDKKLVGLLGLIVLFVFTLLYWTRFQVVDVHAMNGVGFYKINRLTGETVLVSGLDQIRILPVKDLEQPMLQLPAAPGKGQQ
Ga0370479_0020337_1327_1545	3300034123	Untreated Peat Soil	VALIVLFVVTLLYWTRFQVIDVHAMNGVGFYKINRLTGETVLVSGLDQIRILPVKDLEQPQLQFPAPGKGQQ
Ga0370486_025888_708_950	3300034126	Untreated Peat Soil	MDKKLVGLLGLIVLFVFTLLYWTRFQVIDVHAMNGVGFYKINRLTGETVLVSGLDQIRIMPVKDLEQSQLQFPAPVKGQQ
Ga0370490_0011397_1501_1740	3300034128	Untreated Peat Soil	MDKKLVGLLGLIVLFVFTLLYWTRFQVIDVHAMNGVGFYKINRLTGETVLVSGLDQIRIMPVKDLEQPQLQFPAPGKGQ
Ga0370502_0057439_859_1119	3300034156	Untreated Peat Soil	MEGEIFMDKKLVGLLGLIVLFVVTLLYWTRFQVIDVHAMNGVGFYKINRLTGETVLVSGLDQIRILPVKDLEQPQLQFPAPGKGQQ
Ga0370507_0123055_491_733	3300034158	Untreated Peat Soil	MDKKIILCIGLIVIFVFTLLYWTRFQVIDVHAMNGVGFYKINRLTGETVLVSGLDQIRIMPVKDLEQPQLQFPAPGKGQQ
Ga0370481_0072950_797_1057	3300034281	Untreated Peat Soil	MEGEIFMDKKLVGLLGLIVLFVVTLLYWTRFQVIDVHAMNGVGFYKINRLTGETVLVSGLDQIRIMPVKDLEQPQLQFPAPGKAQQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F101441

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences