Metagenome / Metatranscriptome Family F101437

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F101437
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	86 residues
Representative Sequence	MNMRALALVMAIIFLLTHSGCATLNKSQLQTNTAYSENPVADFDTQWKKEEREWLLMVLIVLGFAIVLGATISASSGGNGFFLGINN
Number of Associated Samples	63
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	51.96 %
% of genes near scaffold ends (potentially truncated)	14.71 %
% of genes from short scaffolds (< 2000 bps)	83.33 %
Associated GOLD sequencing projects	56
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (83.333 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (14.706 % of family members)
Environment Ontology (ENVO)	Unclassified (32.353 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (34.314 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 54.78% β-sheet: 0.00% Coil/Unstructured: 45.22%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF01966	HD	6.86
PF07238	PilZ	3.92
PF13174	TPR_6	3.92
PF13464	DUF4115	3.92
PF00072	Response_reg	2.94
PF04055	Radical_SAM	1.96
PF14522	Cytochrome_C7	1.96
PF00717	Peptidase_S24	1.96
PF03884	YacG	0.98
PF02609	Exonuc_VII_S	0.98
PF01467	CTP_transf_like	0.98
PF01894	UPF0047	0.98
PF00990	GGDEF	0.98
PF09723	Zn-ribbon_8	0.98
PF00999	Na_H_Exchanger	0.98
PF05099	TerB	0.98
PF13487	HD_5	0.98
PF04366	Ysc84	0.98
PF05973	Gp49	0.98
PF00216	Bac_DNA_binding	0.98
PF13365	Trypsin_2	0.98
PF01850	PIN	0.98
PF01694	Rhomboid	0.98
PF00211	Guanylate_cyc	0.98
PF13534	Fer4_17	0.98
PF05173	DapB_C	0.98
PF00571	CBS	0.98
PF04430	DUF498	0.98
PF02525	Flavodoxin_2	0.98
PF00850	Hist_deacetyl	0.98
PF02384	N6_Mtase	0.98
PF06941	NT5C	0.98
PF00164	Ribosom_S12_S23	0.98
PF01434	Peptidase_M41	0.98
PF01925	TauE	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0123	Acetoin utilization deacetylase AcuC or a related deacetylase	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.96
COG4679	Phage-related protein gp49, toxin component of the Tad-Ata toxin-antitoxin system	Defense mechanisms [V]	0.98
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	0.98
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	0.98
COG4502	5'(3')-deoxyribonucleotidase	Nucleotide transport and metabolism [F]	0.98
COG3793	Tellurite resistance protein TerB	Inorganic ion transport and metabolism [P]	0.98
COG3737	Uncharacterized protein, contains Mth938-like domain	Function unknown [S]	0.98
COG3657	Putative component of the toxin-antitoxin plasmid stabilization module	Defense mechanisms [V]	0.98
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	0.98
COG3024	Endogenous inhibitor of DNA gyrase, YacG/DUF329 family	Replication, recombination and repair [L]	0.98
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	0.98
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	0.98
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.98
COG1722	Exonuclease VII small subunit	Replication, recombination and repair [L]	0.98
COG1504	Uncharacterized conserved protein, DUF498 domain	Function unknown [S]	0.98
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	0.98
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.98
COG0705	Membrane-associated serine protease, rhomboid family	Posttranslational modification, protein turnover, chaperones [O]	0.98
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	0.98
COG0465	ATP-dependent Zn proteases	Posttranslational modification, protein turnover, chaperones [O]	0.98
COG0432	Thiamin phosphate synthase YjbQ, UPF0047 family	Coenzyme transport and metabolism [H]	0.98
COG0289	4-hydroxy-tetrahydrodipicolinate reductase	Amino acid transport and metabolism [E]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	83.33 %
Unclassified	root	N/A	16.67 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	83.33 %
Unclassified	root	N/A	16.67 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	83.33 %
Unclassified	root	N/A	16.67 %

Name	Rank	Taxonomy	Distribution
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	60.78 %
Unclassified	root	N/A	16.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.92 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.96 %

Name	Rank	Taxonomy	Distribution
unclassified Nitrospirae	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae	50.98 %
Unclassified	root	N/A	16.67 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	5.88 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	2.94 %
Candidatus Abyssubacteria	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Abyssubacteria	1.96 %

Name	Rank	Taxonomy	Distribution
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	50.98 %
Unclassified	root	N/A	16.67 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	3.92 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.94 %
unclassified Nitrospira	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → unclassified Nitrospira	1.96 %
Candidatus Abyssubacteria bacterium SURF_17	species	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Abyssubacteria → Candidatus Abyssubacteria bacterium SURF_17	1.96 %

Name	Rank	Taxonomy	Distribution
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	50.98 %
Unclassified	root	N/A	16.67 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	2.94 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.94 %
Nitrospira bacterium SM23_35	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → unclassified Nitrospira → Nitrospira bacterium SM23_35	1.96 %
Candidatus Abyssubacteria bacterium SURF_17	species	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Abyssubacteria → Candidatus Abyssubacteria bacterium SURF_17	1.96 %
unclassified Nitrospirales	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → unclassified Nitrospirales	0.98 %

Name	Rank	Taxonomy	Distribution
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	50.98 %
Unclassified	root	N/A	16.67 %
unclassified Nitrospiraceae	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae	2.94 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.94 %
Nitrospira bacterium SM23_35	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → unclassified Nitrospira → Nitrospira bacterium SM23_35	1.96 %
Candidatus Abyssubacteria bacterium SURF_17	species	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Abyssubacteria → Candidatus Abyssubacteria bacterium SURF_17	1.96 %
Nitrospirales bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → unclassified Nitrospirales → Nitrospirales bacterium	0.98 %

Name	Rank	Taxonomy	Distribution
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	50.98 %
Unclassified	root	N/A	16.67 %
Nitrospiraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	2.94 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.94 %
Nitrospira bacterium SM23_35	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → unclassified Nitrospira → Nitrospira bacterium SM23_35	1.96 %
Candidatus Abyssubacteria bacterium SURF_17	species	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Abyssubacteria → Candidatus Abyssubacteria bacterium SURF_17	1.96 %
Nitrospirales bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → unclassified Nitrospirales → Nitrospirales bacterium	0.98 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000309\|WSSedA1BaDRAFT_1018299	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1139	Open in IMG/M
3300001213\|JGIcombinedJ13530_107022437	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	969	Open in IMG/M
3300001213\|JGIcombinedJ13530_107404529	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → unclassified Nitrospirales → Nitrospirales bacterium	819	Open in IMG/M
3300001213\|JGIcombinedJ13530_107569711	Not Available	699	Open in IMG/M
3300001213\|JGIcombinedJ13530_108313970	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	508	Open in IMG/M
3300001213\|JGIcombinedJ13530_108350799	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	586	Open in IMG/M
3300003858\|Ga0031656_10002575	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	7308	Open in IMG/M
3300003858\|Ga0031656_10243808	Not Available	611	Open in IMG/M
3300003859\|Ga0031653_10037926	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1329	Open in IMG/M
3300004048\|Ga0055494_10131942	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	565	Open in IMG/M
3300004481\|Ga0069718_16060121	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	788	Open in IMG/M
3300006224\|Ga0079037_100064282	All Organisms → cellular organisms → Bacteria → Proteobacteria	2939	Open in IMG/M
3300006224\|Ga0079037_100118902	All Organisms → cellular organisms → Bacteria	2258	Open in IMG/M
3300006224\|Ga0079037_100128533	All Organisms → cellular organisms → Bacteria	2183	Open in IMG/M
3300006224\|Ga0079037_100857830	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Abyssubacteria → Candidatus Abyssubacteria bacterium SURF_17	894	Open in IMG/M
3300006930\|Ga0079303_10311048	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Abyssubacteria → Candidatus Abyssubacteria bacterium SURF_17	653	Open in IMG/M
3300007072\|Ga0073932_1017870	All Organisms → cellular organisms → Bacteria	5094	Open in IMG/M
3300009037\|Ga0105093_10093862	All Organisms → cellular organisms → Bacteria	1437	Open in IMG/M
3300009075\|Ga0105090_10133054	All Organisms → cellular organisms → Bacteria	1554	Open in IMG/M
3300009078\|Ga0105106_10418492	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → unclassified Nitrospira → Nitrospira bacterium SM23_35	966	Open in IMG/M
3300009078\|Ga0105106_10450335	Not Available	927	Open in IMG/M
3300009078\|Ga0105106_10878859	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	638	Open in IMG/M
3300009081\|Ga0105098_10161129	Not Available	1014	Open in IMG/M
3300009091\|Ga0102851_10049361	All Organisms → cellular organisms → Bacteria	3371	Open in IMG/M
3300009091\|Ga0102851_10358929	Not Available	1451	Open in IMG/M
3300009091\|Ga0102851_10473459	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1281	Open in IMG/M
3300009091\|Ga0102851_12263643	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	619	Open in IMG/M
3300009111\|Ga0115026_10012936	All Organisms → cellular organisms → Bacteria	3784	Open in IMG/M
3300009111\|Ga0115026_10270718	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1174	Open in IMG/M
3300009111\|Ga0115026_10293947	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1134	Open in IMG/M
3300009111\|Ga0115026_10915253	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	695	Open in IMG/M
3300009111\|Ga0115026_11524353	Not Available	557	Open in IMG/M
3300009131\|Ga0115027_10116963	All Organisms → cellular organisms → Bacteria	1568	Open in IMG/M
3300009131\|Ga0115027_10586240	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	818	Open in IMG/M
3300009167\|Ga0113563_11204226	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	882	Open in IMG/M
3300009179\|Ga0115028_11173053	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	630	Open in IMG/M
3300010412\|Ga0136852_10600929	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	1060	Open in IMG/M
3300010413\|Ga0136851_10901511	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300010430\|Ga0118733_104444465	Not Available	748	Open in IMG/M
3300012931\|Ga0153915_10352213	All Organisms → cellular organisms → Bacteria	1656	Open in IMG/M
3300017939\|Ga0187775_10021721	Not Available	1762	Open in IMG/M
3300018029\|Ga0187787_10018331	Not Available	1849	Open in IMG/M
3300019252\|Ga0172286_1048534	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	509	Open in IMG/M
3300022554\|Ga0212093_1077570	All Organisms → cellular organisms → Bacteria	1662	Open in IMG/M
3300026350\|Ga0256823_1013727	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	711	Open in IMG/M
3300026353\|Ga0256818_1000934	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1612	Open in IMG/M
3300026373\|Ga0256817_1004216	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1023	Open in IMG/M
3300026375\|Ga0256803_1011164	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	849	Open in IMG/M
3300027713\|Ga0209286_1015239	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	2777	Open in IMG/M
(restricted) 3300027856\|Ga0255054_10130817	Not Available	1241	Open in IMG/M
3300027871\|Ga0209397_10159701	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1009	Open in IMG/M
3300027877\|Ga0209293_10029005	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2084	Open in IMG/M
3300027877\|Ga0209293_10029644	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	2068	Open in IMG/M
3300027877\|Ga0209293_10045395	All Organisms → cellular organisms → Bacteria	1772	Open in IMG/M
3300027877\|Ga0209293_10172385	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1044	Open in IMG/M
3300027885\|Ga0209450_10203179	All Organisms → cellular organisms → Bacteria	1400	Open in IMG/M
3300027885\|Ga0209450_10571242	Not Available	827	Open in IMG/M
3300027887\|Ga0208980_10122906	Not Available	1523	Open in IMG/M
3300027887\|Ga0208980_10395297	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	798	Open in IMG/M
3300027887\|Ga0208980_10486771	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	708	Open in IMG/M
3300027887\|Ga0208980_10854780	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	506	Open in IMG/M
3300027897\|Ga0209254_10032188	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	4692	Open in IMG/M
3300027897\|Ga0209254_10232859	Not Available	1450	Open in IMG/M
3300027897\|Ga0209254_10365377	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1081	Open in IMG/M
3300027897\|Ga0209254_10522766	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	853	Open in IMG/M
3300027899\|Ga0209668_10640177	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	712	Open in IMG/M
3300027900\|Ga0209253_10202243	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1585	Open in IMG/M
3300027979\|Ga0209705_10435475	Not Available	648	Open in IMG/M
3300031539\|Ga0307380_10599801	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	948	Open in IMG/M
3300031565\|Ga0307379_10150600	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	2444	Open in IMG/M
3300031566\|Ga0307378_10315359	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1471	Open in IMG/M
3300031578\|Ga0307376_10265940	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1153	Open in IMG/M
3300031707\|Ga0315291_10484309	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1152	Open in IMG/M
3300031772\|Ga0315288_10767303	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → unclassified Nitrospira → Nitrospira bacterium SM23_35	896	Open in IMG/M
3300031834\|Ga0315290_10156646	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1962	Open in IMG/M
3300031834\|Ga0315290_10175081	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1856	Open in IMG/M
3300031834\|Ga0315290_10861109	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	771	Open in IMG/M
3300031873\|Ga0315297_10126510	All Organisms → cellular organisms → Bacteria	2054	Open in IMG/M
3300031873\|Ga0315297_10283858	All Organisms → cellular organisms → Bacteria → Nitrospirae	1377	Open in IMG/M
3300031873\|Ga0315297_10654509	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	881	Open in IMG/M
3300031873\|Ga0315297_10690899	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	854	Open in IMG/M
3300032053\|Ga0315284_11832485	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	624	Open in IMG/M
3300032156\|Ga0315295_10197561	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	2018	Open in IMG/M
3300032342\|Ga0315286_10334537	All Organisms → cellular organisms → Bacteria	1599	Open in IMG/M
3300032401\|Ga0315275_10488523	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1379	Open in IMG/M
3300032401\|Ga0315275_11153120	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	845	Open in IMG/M
3300033406\|Ga0316604_10084179	All Organisms → cellular organisms → Bacteria	1658	Open in IMG/M
3300033414\|Ga0316619_10024438	All Organisms → cellular organisms → Bacteria → Nitrospirae	2959	Open in IMG/M
3300033414\|Ga0316619_10196238	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1447	Open in IMG/M
3300033433\|Ga0326726_10053804	All Organisms → cellular organisms → Bacteria	3524	Open in IMG/M
3300033434\|Ga0316613_11026505	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	568	Open in IMG/M
3300033481\|Ga0316600_11266807	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	524	Open in IMG/M
3300033482\|Ga0316627_102695435	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	527	Open in IMG/M
3300033483\|Ga0316629_10409297	All Organisms → cellular organisms → Bacteria → Nitrospirae	958	Open in IMG/M
3300033485\|Ga0316626_10835609	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	810	Open in IMG/M
3300033487\|Ga0316630_11752617	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	566	Open in IMG/M
3300033513\|Ga0316628_100001125	All Organisms → cellular organisms → Bacteria → Nitrospirae	18528	Open in IMG/M
3300033513\|Ga0316628_101006887	Not Available	1106	Open in IMG/M
3300033513\|Ga0316628_101451491	Not Available	914	Open in IMG/M
3300033513\|Ga0316628_101903929	Not Available	790	Open in IMG/M
3300033557\|Ga0316617_100660284	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	981	Open in IMG/M
3300033557\|Ga0316617_102454382	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	541	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	77.45%
Terrestrial	Environmental → Terrestrial	22.55%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	60.78%
Soil	Environmental → Terrestrial → Soil	20.59%
Marine	Environmental → Aquatic → Marine	12.75%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.96%
Sediment	Environmental → Aquatic → Sediment	1.96%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.98%
Peat	Environmental → Terrestrial → Peat	0.98%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Sediment	22.55%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	16.67%
Lake	Environmental → Aquatic → Freshwater → Lake	13.73%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	13.73%
Lentic	Environmental → Aquatic → Freshwater → Lentic	10.78%
Wetlands	Environmental → Aquatic → Marine → Wetlands	10.78%
Clay	Environmental → Terrestrial → Soil → Clay	3.92%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	1.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.96%
Inlet	Environmental → Aquatic → Marine → Inlet	0.98%
Coastal	Environmental → Aquatic → Marine → Coastal	0.98%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.98%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	22.55%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	16.67%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	13.73%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	10.78%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	9.80%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	9.80%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.92%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	3.92%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	1.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.96%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	0.98%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	0.98%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.98%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.98%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	14.71%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	13.73%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	13.73%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	10.78%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	9.80%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	8.82%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	7.84%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	3.92%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	3.92%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	1.96%
Mangrove Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment	1.96%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.96%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	0.98%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.98%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	0.98%
Marine Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment	0.98%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.98%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	0.98%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.98%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000309	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site A1 Bulk	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300003858	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI	Environmental	Open in IMG/M
3300003859	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR	Environmental	Open in IMG/M
3300004048	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleA_D2	Environmental	Open in IMG/M
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300006930	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC	Environmental	Open in IMG/M
3300007072	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Dewar Creek DC9 2012 metaG	Environmental	Open in IMG/M
3300009037	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009075	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009179	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1	Environmental	Open in IMG/M
3300010412	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_10	Environmental	Open in IMG/M
3300010413	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_9	Environmental	Open in IMG/M
3300010430	Marine sediment microbial communities from Gulf of Thailand under amendment with organic carbon and nitrate - JGI co-assembly of 8 samples	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300018029	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MG	Environmental	Open in IMG/M
3300019252	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_deep_8_15_core_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022554	Dewar_combined assembly	Environmental	Open in IMG/M
3300026350	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 7-17 PU6	Environmental	Open in IMG/M
3300026353	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 7-17 PR4	Environmental	Open in IMG/M
3300026373	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 7-17 F6	Environmental	Open in IMG/M
3300026375	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 10-16 CS6	Environmental	Open in IMG/M
3300027713	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027856 (restricted)	Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_23	Environmental	Open in IMG/M
3300027871	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027877	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027885	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW (SPAdes)	Environmental	Open in IMG/M
3300027887	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site A1 Bulk	Environmental	Open in IMG/M
3300027897	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes)	Environmental	Open in IMG/M
3300027899	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300027979	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300031539	Soil microbial communities from Risofladan, Vaasa, Finland - UN-3	Environmental	Open in IMG/M
3300031565	Soil microbial communities from Risofladan, Vaasa, Finland - UN-2	Environmental	Open in IMG/M
3300031566	Soil microbial communities from Risofladan, Vaasa, Finland - UN-1	Environmental	Open in IMG/M
3300031578	Soil microbial communities from Risofladan, Vaasa, Finland - TR-2	Environmental	Open in IMG/M
3300031707	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20	Environmental	Open in IMG/M
3300031772	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031873	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0	Environmental	Open in IMG/M
3300032053	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16	Environmental	Open in IMG/M
3300032156	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0	Environmental	Open in IMG/M
3300032342	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300033406	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_CT	Environmental	Open in IMG/M
3300033414	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_B	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033434	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_CT_b	Environmental	Open in IMG/M
3300033481	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_CT	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033483	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_A	Environmental	Open in IMG/M
3300033485	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_A	Environmental	Open in IMG/M
3300033487	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_A	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
WSSedA1BaDRAFT_10182992	3300000309	Wetland	MILKTLALVVAIIFLLTHSGCASVNKNQMQTTTAYSENPVADFDTQMKKNEREWLLMALIVLGIAIVLGATISAASGGNGFFLGVNN*
JGIcombinedJ13530_1070224371	3300001213	Wetland	KQMNSKTLALLMAIIFLLTHSGCATLNKGQMQTDTAYTENTMSDWDTQWKKEEKEWLLMVLIVLGVAIVLGATISAAAGGNGLFIGVNK*
JGIcombinedJ13530_1074045291	3300001213	Wetland	MVAVIFLLTHSGCAGVNTNQAQTKIAYPENSVADTISQKEKDEREWLITVLIVLGIAIALGATISASSGGNGFFLGTNN*
JGIcombinedJ13530_1075697112	3300001213	Wetland	MINTMKLRTLALVVAIIFLITHSGCASLSKNQMQTTNAYSEFPVDDFNTQMKKDTREWLFVALIVLGIAIALGATISASSSGGGFSMGIHH*
JGIcombinedJ13530_1083139701	3300001213	Wetland	VKKKMNSRILILIVAVLFLLTHSGCAGLNKNQIQTNTAYTENFVADTKSQTEKDTREWLITVLIILGIAIALGATISASSGGDGFFLGVNN*
JGIcombinedJ13530_1083507991	3300001213	Wetland	MKLRTLALVVAIIFLITHSGCASLNKNQIQTTTAFSEIPADDFDTQKKKDAKEWLLMALIVLGIAIALGATISASS
Ga0031656_100025755	3300003858	Freshwater Lake Sediment	MNMRALALVMAIIFLLTHSGCATLNKSQMQTNTAYSENPLADFDTQWKKEEREWLLMVLIVLGFAIVLGATISASSGGNGFFLGINN*
Ga0031656_102438081	3300003858	Freshwater Lake Sediment	MKLKTLALVVTIIFLLTHSGCASVNKNQMQTTTSYSENPVADFDTQMKKNEREWLLMALIVLGISIALGATISAGWVFVGNK*
Ga0031653_100379261	3300003859	Freshwater Lake Sediment	MKLKTLALVVAIIFLLTHSGCASVNKNQMQTTTAYSENPVADVDTQMKKNEREWLLMALIVLGIAIALGATISASSGGNGFFLGINN*
Ga0055494_101319421	3300004048	Natural And Restored Wetlands	MTYKTLALAVAIIFLLTHSGCASVNKNQLQTNTAYSENPLADFDTQKKKDEKEWLLMVLIVLGIGIVFGAAIAASSGGNGFFIGINN*
Ga0069718_160601211	3300004481	Sediment	MAIIFLLTHSGCATLNKGQMQTNTSYSENPLADFDTQWKKEEREWLLMVLIVLGFAVVLGATISASSGGNGFFLGINN*
Ga0079037_1000642822	3300006224	Freshwater Wetlands	MNMRALALVMAIIFLLTHSGCATLNKSQLQTNTAYSENPVADFDTQWKKEEREWLLMVLIVLGFAVVLGATISASSGGNGFFLGINN*
Ga0079037_1001189021	3300006224	Freshwater Wetlands	MNTRALALFMAIIFLLTHSGCATLNKNQMQTNTAYSENPVADFDTKWKKDEREWLLMVLIVLGFAIVLGASISASSGGDGFFLGINK*
Ga0079037_1001285332	3300006224	Freshwater Wetlands	MNSKTLALVVAIIFLLTQSGCATLNKSQIQTNYPYPENPVIDFDTKWKKDEREWMLMVLIVLGFAIVLGGTIAASSGGNGFFLGINN*
Ga0079037_1008578302	3300006224	Freshwater Wetlands	MGPMKVKILALVVAVMFLLTQSGCASLNKNQMQTSTAYAENPLADFDTQMKREEKEWMLMVLIVLGIAIAVGASISASSGGDGFVMGVNK*
Ga0079303_103110481	3300006930	Deep Subsurface	MGPMKVKILALVVAVMFLLTQSGCASLNKNQMQTSTAYSENSVADFDTQMKKEEKEWMLMVLIVLGIAIAVGASIFASSGGDGFVLGVNK*
Ga0073932_10178702	3300007072	Hot Spring Sediment	MRALVFVIAIIFLLTQSGCATVHNGQVQTVPGLSENPVSDSDTQWEKEEREWLLMLAIVLGLAIVLGATIAASSGGNGFFLGVNN*
Ga0105093_100938624	3300009037	Freshwater Sediment	MKSKTLAIVVAIIFLLTQIGCATLKNNQVQQNADYSANAVADFDAKWRKDEKEWLLMVLIVLGVAVVLGAAISASSGGNGFSLGVNR*
Ga0105090_101330543	3300009075	Freshwater Sediment	MKYKTLALAVAIIFLLTHSGCASVNKNQIQTTAAYSENPFADFDAQKKKDEKEWLLMVLIVLGIGIVFGAAIAASSGGDGFFVGINN*
Ga0105106_104184922	3300009078	Freshwater Sediment	MNTKTLALVMAIIFLLTHSGCATLNKSQLQTNTEYSENPAADFDTQWKKEEREWLFMVLIVLGFAVVLGATISASSGGNGFFLGINN*
Ga0105106_104503351	3300009078	Freshwater Sediment	MGPMKVKILALVVAVMFLLTQSGCASLNKNQMQTSTAYAENPVADFDTQMKKEEKEWMLMVLIVLGIAIAVGASIFASSGGDGFVMGVNK*
Ga0105106_108788591	3300009078	Freshwater Sediment	MNTKTLALVIAIIFLITHSGCATLNKGQMQTNTAYSENPLADFDTQWKKEEREWLLMVLIVLGFAIVLGATISASSGGNGFFLGINN*
Ga0105098_101611292	3300009081	Freshwater Sediment	MFKGIWLFTLTFPKINLMKYKTVALVVAVIFLLTHSGCASVNKNQTQMSTAYSESPLAEFDTQKKKDEKEWLLMVLIVLGIGIVFGAAIAASSGGDGFFVGINN*
Ga0102851_100493612	3300009091	Freshwater Wetlands	MNSKTLALVVAIIFLLTQSGCATLNKSQIQTNSPYPENPVIDFDTKWKKDEREWLLMVLIVLGFAIVLGGTIAASSGGNGFFLGINN*
Ga0102851_103589295	3300009091	Freshwater Wetlands	MGPMKVKILALVVAVMFLLTQSGCASLNKNQMQTSTAYAENPLADFDTQMKKEEKEWMLMVLIVLGIAIAVGASIFASSGGDGFVMGVNK*
Ga0102851_104734592	3300009091	Freshwater Wetlands	MNMRALALVMAIIFLLTHSGCATLNKSQLQTNTAYSENPVADFDTQWKKEEREWLLMVLIVLGFAIVLGATISASSGGNGFFLGINN*
Ga0102851_122636431	3300009091	Freshwater Wetlands	MNRKALALVMAIIFLLTHSGCATLNKNQIQTDTAYSENAVTDFDTQWKKEEREWLLMVLIVLGFAIVLGASISASSGGNGFFLGINN*
Ga0115026_100129366	3300009111	Wetland	MNSKILALVVAIIFLLTQSGCATLNKSQIQTNYPYPENPVIDFDTKWKKDEREWLLMVLIVLGFAIVLGGTIAASSGGNGFFLGINN*
Ga0115026_102707182	3300009111	Wetland	MNMRALALVMAIIFLLTHSGCATLNKSQLQTNTAYSENPAADFDTQWKKEEREWLLMVLIVLGFAVVLGATISASSGGNGFFLGINN*
Ga0115026_102939471	3300009111	Wetland	MNSKTLALVVAIIFLLTQMGCATLNTSQMQTNSPYPGNPVTDFDAKWKQDEREWLLMVLIVLGFAIVLGATISASSGGNGFFLGINK*
Ga0115026_109152531	3300009111	Wetland	LALVVAIIFLLTQMGCATLNTSQMQTNTPYPENPVTDFDAKWKKDEREWLLMGAIVLGLAIVLGATISASSGGNGFFLGVNN*
Ga0115026_115243531	3300009111	Wetland	MKLKTLALVVAVIFLITHSGCASVNKNQIQTTTAYSENPVADFDTQMKKNEREWLLMALIVLGISIALGATISAGWVFIGNK*
Ga0115027_101169631	3300009131	Wetland	MGPMKVKILALVVAVMFLLTQSGCASLNKNQMQTSTAYAENPLADFDTQMKKEEKEWMLMVLIVLGIALAVGATISASSGGNGFFMGVNN*
Ga0115027_105862401	3300009131	Wetland	MNSKTLALVVAIIFLLTQSGCATFNKSQIQTNSPYPENPVIDFDTKWKKDEREWLLMVLIVLGFAIVLGGTIAASSGGHGFFLGVNN*
Ga0113563_112042262	3300009167	Freshwater Wetlands	MSDHNPFDPFQYILVRENLMNRKALALVMAIIFLLTHSGCATLNKNQIQTDTAYSENAVTDFDTQWKKEEREWLLMVLIVLGFAIVLGASISASSGGNGFFLGINN*
Ga0115028_111730532	3300009179	Wetland	MGPMKVKILALVVAVMFLLTQSGCASLNKNQMQTSTAYSENSVADFDTQMKKEEKEWMLMVLIVLGIALAVGATISASSGGNGFFMGVNN*
Ga0136852_106009292	3300010412	Mangrove Sediment	MNTRILALVIAVIFFLTHSGCATVNHGQIQTNNPYPENPVTDFDTKWKKDEREWLIMMAIVLGLALVLGATISASSGGNGLFLGINN*
Ga0136851_109015112	3300010413	Mangrove Sediment	MNSKILSLFLVVILLLTHSGCATLNKSQMQTDTAYSTNTLSDRQAEWKKEEREWLIAVLIVLGVAIALGATISASSGGDGFFLGANN*
Ga0118733_1044444652	3300010430	Marine Sediment	MKLKTLALLVAIIFLVTHSGCASVNKNQMQTTTAYSENPVADFDTQMKKDQREWLLMVLIVLGIAIAVGATISAASGGHGFIIGINN*
Ga0153915_103522134	3300012931	Freshwater Wetlands	MNARILILIVAVIFLLTHSGCAGLNKNQIQTNTAYSENYVADTKSQMEKDTREWLITVLIILGIAIALGATISASSGGDGFFLGINN*
Ga0187775_100217213	3300017939	Tropical Peatland	MNSRIFVLIMAIIFLLTHSGCATLNKSQMQTNPAYSENTVADWETQRKKEEREWLLTVLIVLGIAMVAGSTIAVSSGGGGFFLGINK
Ga0187787_100183313	3300018029	Tropical Peatland	MAIIFLLTHSGCATLNKSQMQTNPAYSENTVADWETQRKKEEREWLLTVLIVLGIAMVAGSTIAVSSGGGGFFLGINK
Ga0172286_10485341	3300019252	Wetland	RALALFMAIIFLLTHSGCATLNKNQMQTNTAYSENPVADFDTKWKKDEREWLLMVLIVLGFAIVLGASISASSGGDGFFLGINK
Ga0212093_10775702	3300022554	Hot Spring Sediment	MRALVFVIAIIFLLTQSGCATVHNGQVQTVPGLSENPVSDSDTQWEKEEREWLLMLAIVLGLAIVLGATIAASSGGNGFFLGVNN
Ga0256823_10137272	3300026350	Sediment	FTHSACATSHKNQLPTDTAYSESAVTDFDTQWKKEEREWLLMVFIVLGLAVVLGASISAASGGNGFFLGINR
Ga0256818_10009341	3300026353	Sediment	MNRKALALFVAIIFLFTHSACATSHKNQLPTDTAYSESAVTDFDTQWKKEEREWLLMVFIVLGLAVVLGASISAASGGNGFFLGINR
Ga0256817_10042162	3300026373	Sediment	MNRKALALFVAIIFLFTHSGCATSHKNQIPTDTAYSENAVTDFDTQWKKDEREWLLMVFIVLGLAVVLGASISAASGGNGFFLGINR
Ga0256803_10111642	3300026375	Sediment	MNRKALALFVAIIFLFTHSGCATSHKNQIPTDTAYSENAVTDFDTQWKKDEREWLLMVFIVLGLAVVLGASISAASGGNG
Ga0209286_10152392	3300027713	Freshwater Sediment	MNTKTLALVIAIIFLITHSGCATLNKGQMQTNTAYSENPLADFDTQWKKEEREWLLMVLIVLGFAIVLGATISASSGGNGFFLGINN
(restricted) Ga0255054_101308173	3300027856	Seawater	MKLKPLALLVAIIFLVTHSGCASVNKNQMQTTTAYSENPIADFDTQMKKDQREWLLMVLIVLGIAIAVGATISAASGGHGFIIGLNN
Ga0209397_101597011	3300027871	Wetland	MGPMKVKILALVVAVMFLLTQSGCASLNKNQMQTSTAYAENPLADFDTQMKKEEKEWMLMVLIVLGIALAVGATISASSGGNGFFMGVNN
Ga0209293_100290052	3300027877	Wetland	MAIIFLLTHSGCATLNKNQIQTDTAYSENAVTDFDTQWKKEEREWLLMVLIVLGFAIVLGASISASSGGNGFFLGINN
Ga0209293_100296442	3300027877	Wetland	MNSKTLALVVAIIFLLTQSGCATLNKSQIQTNYPYPENPVIDFDTKWKKDEREWMLMVLIVLGFAIVLGGTIAASSGGNGFFLGINN
Ga0209293_100453953	3300027877	Wetland	MNTRALALFMAIIFLLTHSGCATLNKNQMQTNTAYSENPVADFDTKWKKDEREWLLMVLIVLGFAIVLGASISASSGGDGFFLGINK
Ga0209293_101723852	3300027877	Wetland	MNMRALALVMAIIFLLTHSGCATLNKSQLQTNTAYSENPVADFDTQWKKEEREWLLMVLIVLGFAVVLGATISASSGGNGFFLGINN
Ga0209450_102031794	3300027885	Freshwater Lake Sediment	MKSKILTLVVAVIFLLTQIGCATLNKNQMQPNSESAVGDFDSKWKKDEQEWLLMVLIVLGVAVVFGAAISASSGGNGFSLGINQ
Ga0209450_105712422	3300027885	Freshwater Lake Sediment	MKYKTLALVVAIIFLVTHSGCASVNKNHIQTTTAYSENPVADFDTQKKKDEKEWLLMVLMVLGIGIVLGAAISASSGGNGFFLGVNN
Ga0208980_101229062	3300027887	Wetland	MKLKTLASVVAIIFLLTHSGCASVNKNQMQTTTAYSENPVADFDTQMKKNEREWLLMALIVLGISIALGATISAGWVFVGNK
Ga0208980_103952971	3300027887	Wetland	MNSKTLALLMAIIFLLTHSGCATLNKGQMQTDTAYTENTMSDWDTQWKKEEKEWLLMVLIVLGVAIVLGATISAAAGGNGLFIGVNK
Ga0208980_104867711	3300027887	Wetland	MNTKTLALVVAIIFLLTHSGCATLNKSQMQTNPAYSENPVADFDAKWKKDEREWLLMVLIVLGFAIVLGATISASSGGNGFFLGVNN
Ga0208980_108547802	3300027887	Wetland	MRALALVMAIIFLLTHSGCATLNKSQLQTNTAYSENPVADFDTQWKKEEREWLLMVLIVLGFAIVLGATISASSGGNGVFLGINN
Ga0209254_100321884	3300027897	Freshwater Lake Sediment	MNMRALALVMAIIFLLTHSGCATLNKSQMQTNTAYSENPLADFDTQWKKEEREWLLMVLIVLGFAIVLGATISASSGGNGFFLGINN
Ga0209254_102328591	3300027897	Freshwater Lake Sediment	MELKTLALVVAVIFLLTHSGCASVNKNQMQTTTAYSENPVADFDTQMKKNEREWLLMALVVLGISIALGATISAGWVFLGNK
Ga0209254_103653771	3300027897	Freshwater Lake Sediment	MKLKTLALVVAIIFLLTHSGCASVNKNQMQTNTAYSENPVADFDTKMKKDQREWLLMALIVLGIAIALGATISASSGGNGFFLGINN
Ga0209254_105227662	3300027897	Freshwater Lake Sediment	MNTKTLALVIAIIFLLTHSGCATLNKSQLQTNTAYSENPAADFDTQWKKEEREWLLMVLIVLGFAVVLGATISASSGGNGFFLGINN
Ga0209668_106401772	3300027899	Freshwater Lake Sediment	MRALALVMAIIFLLTHSGCATLNKSPLQTNSAYSENPAADFDTQWKKEEREWLLMVLIVLGFAIVLGATISASSGGNGFFLGINN
Ga0209253_102022431	3300027900	Freshwater Lake Sediment	MKLKTLALVVAIIFLLTHSGCASVNKNQMQTTTAYSENPVADVDTQMKKNEREWLLMALIVLGIAIALGATISASSGGNGFFLGINN
Ga0209705_104354752	3300027979	Freshwater Sediment	MGPMRVKILALVVAVMFLLTQSGCASLNKNQMQTSTAYAENPVADFDTQMKKEEKEWMLMVLIVLGIAIAVGASIFASSGGDGFVMGVNK
Ga0307380_105998012	3300031539	Soil	MNSKTSALVMAIIFLLTHGGCATLNTSQMQTNSPYPENSVADFDTKWKKDEREWLLMVLIVLGFAIVLGATISASSGGDGFFLGINN
Ga0307379_101506004	3300031565	Soil	MNMRALALLMAIIFLLTHSGCATLNKSQLQTNTAYSENPLADFDTQWKKEEREWLLMVLIVLGFAIVLGATISASSGGNGFFLGINN
Ga0307378_103153593	3300031566	Soil	MRALALLMAIIFLLTHSGCATLNKSQLQTNTAYSENPLADFDTQWKKEEREWLLMVLIVLGFAIVLGATISASSGGNGFFLGINN
Ga0307376_102659402	3300031578	Soil	MNMRALALVMAIIFLLTHSGCATLNKSQMQTNTTYSENPAADFDTQWKKEEREWLLMVLIVLGFAIVLGATISASSGGNGFFLGINN
Ga0315291_104843092	3300031707	Sediment	MRALALVMAIIFLLTHSGCATLNKSQMQTNTTYSENPAADFDTQWKKEEREWLLMVLIVLGFAVVLGATISASSGGNGFFLGINN
Ga0315288_107673032	3300031772	Sediment	MAIIFLLTHSGCATLNKSQMQTNTTYSENPAADFDTQWKKEEREWLLMVLIVLGFAVVLGATISASSGGNGFFLGINN
Ga0315290_101566461	3300031834	Sediment	MNKKTLALVMAIIFLLTHSGCATLNKSQMQTNTAYSENPVADFDTQWKKEEREWLFMVLIVLGFAVVLGATISASSGGNGFFLGINN
Ga0315290_101750812	3300031834	Sediment	MNKKTLALVMAIIFLLTHSGCATLNKSQMQTNTTYSENPAADFDTQWKKEEREWLLMVLIVLGFAVVLGATISASSGGNGFFLGINN
Ga0315290_108611091	3300031834	Sediment	RCGISEAVHEIRTVVNKDKGALTLVMAIIFLLTHSGCATLNKSQMQTNTAYSGNPLADFDTQWKKDEREWLLMVLIVLGFATVLGATISASSGGSGFFLGINN
Ga0315297_101265102	3300031873	Sediment	MKLKTLALVVAIIFLLTQSGCASLNKNQMQTTTAYSENPVADFDTQMKKNQREWLLMALIVLGIAIALGATISAASGGNGFFLGVNN
Ga0315297_102838583	3300031873	Sediment	KKTLALVMAIIFLLTHSGCATLNKSQMQTNTTYSENPAADFDTQWKKEEREWLLMVLIVLGFAVVLGATISASSGGNGFFLGINN
Ga0315297_106545091	3300031873	Sediment	MRALALVMAIIFLLTHSGCATLNKSQMQTNTTYSENPVVDFDTQWKKEEREWLIMVLIVLGVAIVLGATISASSGGNGFFLGINN
Ga0315297_106908992	3300031873	Sediment	MNKKTLALVMAIIFLLTHSGCATLNKNQMQTNTAYSEHTVTDWETQWKKEEREWLIAVLIVLGFAIVLGATISASSGGNGFFLGINN
Ga0315284_118324851	3300032053	Sediment	MNKKTLALVMAIIFLLTHSGCATLNKSQMQTNTTYSENPAAVFDTQWKKEEREWLLMVLIVLGFAVVLGATISASSGGNGF
Ga0315295_101975612	3300032156	Sediment	MNMRALALVMAIIFLLTHSGCATLNKSQMQTNTTYSENPAADFDTQWKKEEREWLLMVLIVLGFAVVLGATISASSGGNGFFLGINN
Ga0315286_103345372	3300032342	Sediment	MNMRALALVMAIIFLLTHSGCATLNKSQMQTNTTYSENPVVDFDTQWKKEEREWLIMVLIVLGVAIVLGATISASSGGNGFFLGINN
Ga0315275_104885231	3300032401	Sediment	MNIKTLALVMAIIFLLTHSGCATLNKNQMQTNTAYSEHTVTDWETQWKKEEREWLIAVLIVLGFAIVLGATISASSGGNGFFLGINN
Ga0315275_111531202	3300032401	Sediment	MNMRALALVMAIIFLLTHSGCVTLNKSQMQTNTTYSENPVVDFDTQWKKEEREWLIMVLIVLGVAIVLGATISASSGGNGFFLGINN
Ga0316604_100841796	3300033406	Soil	MGPMKVKILALVVAVMFLLTQSGCASLNKNQMQTSTAYAENPLADFDTQMKREEKEWMLMVLIVLGIAIAVGASISASSGGDGFVMGVNK
Ga0316619_100244382	3300033414	Soil	MNSKTLALVVAIIFLLTQSGCATLNKSQIQTNSPYPENPVIDFDTKWKKDEREWLLMVLIVLGFAIVLGGTIAASSGGNGFFLGINN
Ga0316619_101962382	3300033414	Soil	VIWSMSDHNPFDPFQYILVRENLMNRKALALVMAIIFLLTHSGCATLNKNQIQTDTAYSENAVTDFDTQWKKEEREWLLMVLIVLGFAIVLGASISASSGGNGFFLGINN
Ga0326726_100538042	3300033433	Peat Soil	MKYKTLVLVVAIIFLLTHSGCASVNKNQVQTTTAYSENPLADFDTQKKKDEKEWLLMVLIVLGIGIVFGAAISASSGGDGFFLGINN
Ga0316613_110265051	3300033434	Soil	IFLLTQSGCATLNKSQIQTNSPYPENPVIDFDTKWKKDEREWLLMVLIVLGFAIVLGGTIAASSGGNGFFLGINN
Ga0316600_112668071	3300033481	Soil	MNSKTLALVVAIIFLLTQSGCATLNKSQIQTNSPYPENPVIDFDTKWKKDEREWMLMVLIVLGFAIVLGGTIAASSGGNGFFLGINN
Ga0316627_1026954352	3300033482	Soil	MRALALVMAIIFLLTHSGCATLNKSQMQTNTAYSENPVADFDTQWKKEEREWLLMVLIVLGFAIVLGATISASSGGNGFFLGINN
Ga0316629_104092972	3300033483	Soil	LALVVAVMFLLTQSGCASLNKNQMQTSTAYAENPLADFDTQMKREEKEWMLMVLIVLGIAIAVGASISASSGGDGFVMGVNK
Ga0316626_108356091	3300033485	Soil	MNMRALALVMAIIFLLTHSGCATLNKSQMQTNTPYPENPATDFDAKWKKDEREWLLMVAIVLGLAIVLGGTIAASSGGKGFFLGINN
Ga0316630_117526171	3300033487	Soil	MGPMKVKILALAVTVMFLLTQSGCASLNKNQMQTSTAYSENSVADFDTQMKKEEKEWMLMVLIVLGIALAVGATISASSGGNGFFMGVNK
Ga0316628_1000011251	3300033513	Soil	LVMAIIFLLTQSGCATLNTSQMQTDTAYSEKRVPDFDTEWKKEEREWLLMVLIILGVAIAVGATIAISSGGGGFSMGVNN
Ga0316628_1010068872	3300033513	Soil	MNSKTLALVVAIIFLLTQMGCATLNTSQMQTNSPYPGNPVTDFDAKWKKDEREWLLMGAIVLGLAIVLGATISASSGGNGFF
Ga0316628_1014514912	3300033513	Soil	MNTRALALIMAIIFLLTQSGCATLNTSQMQTNTPYPDGTMADQGAQWKKEEKEWWLMVLIVLGIAIAVGATIAVSSGGGGFSMGVNN
Ga0316628_1019039291	3300033513	Soil	MNAKTLALVMAIIFLLTQSGCATINKSQMQTNTAYSEITVADFDTQRKKEEREWLLMVLIVLGVAIAVGATIAVSSGGGGFSMGVNN
Ga0316617_1006602841	3300033557	Soil	MNSKTLALVVAIIFLLTQSGCATLNKSQIQTNYPYPENPVIDFDTKWKKDEREWLLMVLIVLGFAIVLGGTIAASSGGNGFFLGINN
Ga0316617_1024543822	3300033557	Soil	MGPMKVKILALVVAVMFLLTQSGCASLNKNQMQTSTAYSENSVADFDTQMKKEEKEWMLMVLIVLGIALAVGATISASSGGNGFFMGVNN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters