Metagenome / Metatranscriptome Family F101435

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F101435
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	122 residues
Representative Sequence	MINQMQDFVAEQTSALTGQIQKFGKDSVETVREAVVGSADTLKSLKSPVRVFARSGVKLTTVSQTAVASLIELQSDMLTSALSDAALRLERASRADNVVDLVRDQIELIPATRDRIVED
Number of Associated Samples	57
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	88.66 %
% of genes near scaffold ends (potentially truncated)	94.12 %
% of genes from short scaffolds (< 2000 bps)	88.24 %
Associated GOLD sequencing projects	49
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (50.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (46.078 % of family members)
Environment Ontology (ENVO)	Unclassified (50.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (47.059 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 73.47% β-sheet: 0.00% Coil/Unstructured: 26.53%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF01345	DUF11	32.35
PF00270	DEAD	6.86
PF09361	Phasin_2	6.86
PF13307	Helicase_C_2	1.96
PF11026	DUF2721	0.98
PF00814	TsaD	0.98
PF11808	PhoR	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0533	tRNA A37 threonylcarbamoyltransferase TsaD	Translation, ribosomal structure and biogenesis [J]	0.98
COG1214	tRNA A37 threonylcarbamoyladenosine modification protein TsaB	Translation, ribosomal structure and biogenesis [J]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.00 %
Unclassified	root	N/A	50.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	50.00 %
Unclassified	root	N/A	50.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	50.00 %
Unclassified	root	N/A	50.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	49.02 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	39.22 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	32.35 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	3.92 %
Ignavibacteriae	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
unclassified Xanthomonadales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales	31.37 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	3.92 %
Ignavibacteria	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	31.37 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	3.92 %
Ignavibacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → Ignavibacteriales	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	31.37 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	3.92 %
Ignavibacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → Ignavibacteriales → Ignavibacteriaceae	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	31.37 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	3.92 %
Ignavibacterium	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → Ignavibacteriales → Ignavibacteriaceae → Ignavibacterium	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	31.37 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	3.92 %
Ignavibacterium album	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → Ignavibacteriales → Ignavibacteriaceae → Ignavibacterium → Ignavibacterium album	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004146\|Ga0055495_10093860	Not Available	699	Open in IMG/M
3300004241\|Ga0066604_10105575	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1117	Open in IMG/M
3300004282\|Ga0066599_100215993	All Organisms → cellular organisms → Bacteria → Proteobacteria	1058	Open in IMG/M
3300004808\|Ga0062381_10423434	Not Available	515	Open in IMG/M
3300006224\|Ga0079037_100087328	All Organisms → cellular organisms → Bacteria → Proteobacteria	2580	Open in IMG/M
3300006224\|Ga0079037_100732230	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	968	Open in IMG/M
3300009009\|Ga0105105_10244333	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	949	Open in IMG/M
3300009081\|Ga0105098_10762072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	519	Open in IMG/M
3300009087\|Ga0105107_10147593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1654	Open in IMG/M
3300009091\|Ga0102851_10209963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1834	Open in IMG/M
3300009091\|Ga0102851_11979934	Not Available	660	Open in IMG/M
3300009091\|Ga0102851_12073625	Not Available	645	Open in IMG/M
3300009131\|Ga0115027_10615472	Not Available	802	Open in IMG/M
3300009153\|Ga0105094_10097695	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1655	Open in IMG/M
3300009165\|Ga0105102_10300789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	830	Open in IMG/M
3300009165\|Ga0105102_10883559	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	514	Open in IMG/M
3300009166\|Ga0105100_10532148	Not Available	717	Open in IMG/M
3300009167\|Ga0113563_10539727	All Organisms → cellular organisms → Bacteria → Proteobacteria	1280	Open in IMG/M
3300009167\|Ga0113563_11776836	Not Available	733	Open in IMG/M
3300009169\|Ga0105097_10079670	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1782	Open in IMG/M
3300009170\|Ga0105096_10027414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	2784	Open in IMG/M
3300009170\|Ga0105096_10533215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	613	Open in IMG/M
3300009179\|Ga0115028_11062441	Not Available	655	Open in IMG/M
3300009179\|Ga0115028_11174763	Not Available	630	Open in IMG/M
3300009179\|Ga0115028_11672373	Not Available	548	Open in IMG/M
3300014266\|Ga0075359_1031117	Not Available	851	Open in IMG/M
3300014305\|Ga0075349_1052606	Not Available	833	Open in IMG/M
3300014319\|Ga0075348_1230443	Not Available	523	Open in IMG/M
3300022384\|Ga0210321_1041336	Not Available	627	Open in IMG/M
3300024056\|Ga0124853_1098846	Not Available	550	Open in IMG/M
3300025106\|Ga0209398_1034603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1390	Open in IMG/M
3300026069\|Ga0208539_1016360	Not Available	714	Open in IMG/M
3300027683\|Ga0209392_1189908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	628	Open in IMG/M
3300027719\|Ga0209467_1251609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	600	Open in IMG/M
3300027762\|Ga0209288_10109719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	869	Open in IMG/M
3300027762\|Ga0209288_10241063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	596	Open in IMG/M
3300027796\|Ga0209373_10047542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	2174	Open in IMG/M
3300027800\|Ga0209800_10210984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	841	Open in IMG/M
3300027818\|Ga0209706_10061271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1891	Open in IMG/M
3300027841\|Ga0209262_10633159	Not Available	518	Open in IMG/M
3300027871\|Ga0209397_10065719	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → Ignavibacteriales → Ignavibacteriaceae → Ignavibacterium → Ignavibacterium album	1413	Open in IMG/M
3300027871\|Ga0209397_10079410	All Organisms → cellular organisms → Bacteria → Proteobacteria	1321	Open in IMG/M
3300027871\|Ga0209397_10098418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1221	Open in IMG/M
3300027877\|Ga0209293_10232542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	916	Open in IMG/M
3300027877\|Ga0209293_10302589	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	812	Open in IMG/M
3300027885\|Ga0209450_10221940	All Organisms → cellular organisms → Bacteria → Proteobacteria	1343	Open in IMG/M
3300027890\|Ga0209496_10137813	All Organisms → cellular organisms → Bacteria → Proteobacteria	1099	Open in IMG/M
3300027890\|Ga0209496_10844547	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	508	Open in IMG/M
3300027897\|Ga0209254_11043961	Not Available	527	Open in IMG/M
3300027900\|Ga0209253_10805233	Not Available	667	Open in IMG/M
3300027972\|Ga0209079_10250645	Not Available	603	Open in IMG/M
3300027975\|Ga0209391_10271960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	680	Open in IMG/M
3300033406\|Ga0316604_10191762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1101	Open in IMG/M
3300033406\|Ga0316604_10426224	Not Available	728	Open in IMG/M
3300033406\|Ga0316604_10510325	Not Available	661	Open in IMG/M
3300033408\|Ga0316605_11077802	Not Available	773	Open in IMG/M
3300033413\|Ga0316603_10001792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	11582	Open in IMG/M
3300033413\|Ga0316603_11173956	Not Available	727	Open in IMG/M
3300033413\|Ga0316603_11321647	Not Available	683	Open in IMG/M
3300033413\|Ga0316603_12352095	Not Available	502	Open in IMG/M
3300033414\|Ga0316619_10763503	Not Available	822	Open in IMG/M
3300033416\|Ga0316622_100057381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3697	Open in IMG/M
3300033416\|Ga0316622_100308100	All Organisms → cellular organisms → Bacteria → Proteobacteria	1744	Open in IMG/M
3300033416\|Ga0316622_100430702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1489	Open in IMG/M
3300033416\|Ga0316622_100540639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1333	Open in IMG/M
3300033416\|Ga0316622_101807438	Not Available	711	Open in IMG/M
3300033418\|Ga0316625_100263940	All Organisms → cellular organisms → Bacteria → Proteobacteria	1194	Open in IMG/M
3300033418\|Ga0316625_100357235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1077	Open in IMG/M
3300033418\|Ga0316625_101039350	Not Available	733	Open in IMG/M
3300033419\|Ga0316601_101026899	Not Available	823	Open in IMG/M
3300033419\|Ga0316601_101304224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	729	Open in IMG/M
3300033419\|Ga0316601_102047028	Not Available	577	Open in IMG/M
3300033434\|Ga0316613_10020695	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3643	Open in IMG/M
3300033434\|Ga0316613_10297638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1066	Open in IMG/M
3300033434\|Ga0316613_10674553	Not Available	707	Open in IMG/M
3300033481\|Ga0316600_10107769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1704	Open in IMG/M
3300033481\|Ga0316600_10235210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1210	Open in IMG/M
3300033481\|Ga0316600_10303953	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1074	Open in IMG/M
3300033481\|Ga0316600_10318893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1050	Open in IMG/M
3300033482\|Ga0316627_101059773	Not Available	791	Open in IMG/M
3300033483\|Ga0316629_10690949	Not Available	771	Open in IMG/M
3300033483\|Ga0316629_10763281	Not Available	738	Open in IMG/M
3300033483\|Ga0316629_11080414	Not Available	635	Open in IMG/M
3300033485\|Ga0316626_11116747	Not Available	702	Open in IMG/M
3300033485\|Ga0316626_11197653	Not Available	679	Open in IMG/M
3300033485\|Ga0316626_11355459	Not Available	638	Open in IMG/M
3300033485\|Ga0316626_11373513	Not Available	634	Open in IMG/M
3300033487\|Ga0316630_10257036	All Organisms → cellular organisms → Bacteria → Proteobacteria	1320	Open in IMG/M
3300033487\|Ga0316630_11572754	Not Available	595	Open in IMG/M
3300033487\|Ga0316630_12058319	Not Available	525	Open in IMG/M
3300033488\|Ga0316621_10075458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1803	Open in IMG/M
3300033488\|Ga0316621_10286121	All Organisms → cellular organisms → Bacteria → Proteobacteria	1076	Open in IMG/M
3300033488\|Ga0316621_11020245	Not Available	617	Open in IMG/M
3300033521\|Ga0316616_100164188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	2134	Open in IMG/M
3300033521\|Ga0316616_104084151	Not Available	549	Open in IMG/M
3300033557\|Ga0316617_101652737	Not Available	650	Open in IMG/M
3300034052\|Ga0373889_093916	Not Available	500	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.02%
Engineered	Engineered	0.98%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	50.00%
Aquatic	Environmental → Aquatic	49.02%
Bioremediation	Engineered → Bioremediation	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	50.00%
Freshwater	Environmental → Aquatic → Freshwater	47.06%
Marine	Environmental → Aquatic → Marine	1.96%
Metal	Engineered → Bioremediation → Metal	0.98%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	50.00%
Sediment	Environmental → Aquatic → Freshwater → Sediment	26.47%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.82%
Pond	Environmental → Aquatic → Freshwater → Pond	5.88%
Lentic	Environmental → Aquatic → Freshwater → Lentic	4.90%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.98%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.98%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.98%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	50.00%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	26.47%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	8.82%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	5.88%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	4.90%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.98%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.98%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.98%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	46.08%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	15.69%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	10.78%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	7.84%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	5.88%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	4.90%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	3.92%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.98%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	0.98%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.98%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.98%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004146	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleB_D2	Environmental	Open in IMG/M
3300004241	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 11	Environmental	Open in IMG/M
3300004282	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Initial sediment	Environmental	Open in IMG/M
3300004808	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare1Fresh	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300009009	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009087	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1	Environmental	Open in IMG/M
3300009153	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009165	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009166	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009169	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009170	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm May2015	Environmental	Open in IMG/M
3300009179	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1	Environmental	Open in IMG/M
3300014266	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_TuleB_D1	Environmental	Open in IMG/M
3300014305	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleB_D1	Environmental	Open in IMG/M
3300014319	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleA_D1	Environmental	Open in IMG/M
3300022384	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024056	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300025106	Groundwater microbial communities from Big Spring, Nevada to study Microbial Dark Matter (Phase II) - Ash Meadows Big Spring (SPAdes)	Environmental	Open in IMG/M
3300026069	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLC_D1 (SPAdes)	Environmental	Open in IMG/M
3300027683	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027719	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 11 (SPAdes)	Environmental	Open in IMG/M
3300027762	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027796	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 5 (SPAdes)	Environmental	Open in IMG/M
3300027800	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 8 (SPAdes)	Environmental	Open in IMG/M
3300027818	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027841	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Low cellulose week 11 (SPAdes)	Environmental	Open in IMG/M
3300027871	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027877	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027885	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW (SPAdes)	Environmental	Open in IMG/M
3300027890	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027897	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes)	Environmental	Open in IMG/M
3300027899	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300027972	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027975	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300033406	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_CT	Environmental	Open in IMG/M
3300033408	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033414	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_B	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300033418	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_A	Environmental	Open in IMG/M
3300033419	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT	Environmental	Open in IMG/M
3300033434	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_CT_b	Environmental	Open in IMG/M
3300033481	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_CT	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033483	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_A	Environmental	Open in IMG/M
3300033485	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_A	Environmental	Open in IMG/M
3300033487	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_A	Environmental	Open in IMG/M
3300033488	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D1_C	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M
3300034052	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A1A4.2	Engineered	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0055495_100938601	3300004146	Natural And Restored Wetlands	MIEQIQDFVSEQTAAITSKVKQIRDESTTTVRDAVVESAGNIKSLKSPVRVIARSGVKLTSVSQTAVASLIELQSDVLTSALSDVALRLERAARADGIVDLVRDQYELAHATRGRVVEDAQRA
Ga0066604_101055752	3300004241	Freshwater	MINQMQDFVAEQTSALTGQIQKFGKDSVETVREAVVGSADTLKSLKSPVRVFARSGVKLTTVSQTAVASLIELQSDMLTSALSDAALRLERASRADNVVDLVRDQIELIPATRDRIVED
Ga0066599_1002159931	3300004282	Freshwater	MIVQMQEFVAEQTAALTSQVEKMRKESVETVRGAATDSAENLKALKSPVRTLARSGIKVTAVSQTAVASLIDLQSDMLTAAISEAALRLERAARAENVLELVRDQIEMIPATRTRIVEDAQRAALIFKHAGRDLR
Ga0062381_104234341	3300004808	Wetland Sediment	MIDQIQDFMSEQTAAISSQVKKFRKDSVETVRDAVSVSADNLKSLKSPVRVIARSGVKVTNVSQTAVASLIELQSDILTSTLTGMALRLERAARADGIVELMRDQFEL
Ga0079037_1000873283	3300006224	Freshwater Wetlands	MIAQMQDFVAEQTAVLQDQMDKIRKDSVETVREAVVGSAENLKALKSPVRTIARSTVKVTSVSQTAVASLIELQSDMLTSAISDAALRLERASRADNIVELVREQVEMLPATRARIVEDAQRAVTIFKHAGRD
Ga0079037_1007322301	3300006224	Freshwater Wetlands	MIAQMQDFVAEQTAVLQDQMDKIRKESVETVREAVVGSAENLKALKSPVRTIARSTVKVTTVSQTAVASLIELQSDMLTSAISDAALRLERASRADNIIELVREQVEMLPATRA
Ga0105105_102443331	3300009009	Freshwater Sediment	MQHRPERQMINQMQDFVAEQTSALNGQIQKLGKDSVETVREAVVGSADTLKALKAPVRVFARSGVKLTTVSQTAVASLIELQSDMLTSALSDAALRLERASRADNVVDLVRDQIELIPATRDRIVED
Ga0105098_107620721	3300009081	Freshwater Sediment	MIAQMQEFVAEQTAVLQGQVEKIAKESVETVRETAAGSAETLKALKSPVRTLARSTIKVTTVSQTAVASLIDLQSDMLTSAISDAALRLERASRADNIVDLVRDQIEMIP
Ga0105107_101475931	3300009087	Freshwater Sediment	MINQMQDFVAEQTSALTGQIQKLGKDSVETVREAVVGSADTLKALKAPVRVFARSGVKLTTVSQTAVASLIELQSDMLTSALSDAALRLERASRADNVVDLVRDQI
Ga0102851_102099633	3300009091	Freshwater Wetlands	MQQPQPQEPTMIEQIQEFVSEQTAAISGQVSKFRKESAETVRETMVGSADSIKSFKTPIRVFARSGVKLTAVSQTAVSSFIELQSDMLTSAISDVALRLERASRAENVIDLVR
Ga0102851_119799342	3300009091	Freshwater Wetlands	MQQHALTQEPAMIEQIQEFMSEQTSALSGQVQKFRKESTETVREAFVGSAENIKALKSPVRVFARSGVKLTTVSQTAVSNLIELQSDMLTSALSDVALRLERAARAENIVDLVRDQFEMVPATRARVVEDAQRA
Ga0102851_120736252	3300009091	Freshwater Wetlands	MQQHGQAENQEPQMIEQIQDFVSEQTAAISSQVQKFRKDSVETVRDAVSVSADNIKSLKSPVRVFARSGVKVTNVSQTAVASLIELNSDMVTSALSDVALRLERAARAD
Ga0115027_106154721	3300009131	Wetland	MISQMQEFVADQTAAISSQVSKIRKESVETVREAAVGSAEGLKSLKSPVRTLARSGIKITNVSQTAVANLIELQSDMVTAAISEAALRLERASRAENLVELVREQFEMIPATR
Ga0105094_100976953	3300009153	Freshwater Sediment	MQHRQERQMINQMQDFVAEQTSALTGQIQKLGKDSVETVREAVVGSADTLKALKSPVRVIARSGVKLTTVSQTAVASLIELQSDMLTSALSDAALRLERASRADNVVDLVR
Ga0105102_103007892	3300009165	Freshwater Sediment	MQHRQERHMINQMQDFVAEQTSALTGQIQRFGKDSVETVREAVVGSADTLKALKSPVRVFARSGVKLTTVSQTAVASLIELQSDMLTSALSDAALRLERASRADNVVDLVRD
Ga0105102_108835591	3300009165	Freshwater Sediment	MQHRPERQMINQMQDFVAEQTSALTGQIQKLGKDSVETVREAVVGSADTLKALKAPVRVFARSGVKLTTVSQTAVASLIELQSDMLTSALSDAALRLERASRADNVVVLVRDQIELIPATRDRI
Ga0105100_105321482	3300009166	Freshwater Sediment	MFNQIQEFVAEQTSAWQDEMQKIRTQSVESVRETAVGSAETLKSLKSPVRTIARSGVKITAVSQNAVASLIELQSDMLTSAITAAALRLERASRADGLVDLVRDQIEMIPATRDRLVEAAQHAVMIFKHARHDLRDGAKTH*
Ga0113563_105397273	3300009167	Freshwater Wetlands	MQQMLRCSTHPNKEPTMIAQMQDFVAEQTAVLQDQMDKIRKDSVETVREAVVGSAENLKALKSPVRTIARSTVKVTSVSQTAVASLIELQSDMLTSAISDAALRLERASRADNIIELVREQVEMLPATRARIVEDAQ
Ga0113563_117768362	3300009167	Freshwater Wetlands	LCNATNAATQHQPSAKEFTMIDRMQEYVADKTAVLQGQVEKLAKDSVETVRETVVGSAEALKALKSPVRTLARSGVKITTVSQTAVVSLIELQSDVLTSAISDAALRLERASRAENILDLVRDQFEMLPATRARIVEDAQRAALIFKHAG
Ga0105097_100796701	3300009169	Freshwater Sediment	MQHRQEHHMINEMQDFVAAQTSALTGQIQRFGKDSVETVREAVVGSADTLKALKSPVRVVARSGVKLTAVSQTAVASLIELQSDMLTSALSDAALRLERASRADNVVDLVRDQIELIPAT
Ga0105096_100274141	3300009170	Freshwater Sediment	MIAQMQEFVAEQTAVLQGQVEKIAKESVETVRETAAGSAETLKALKSPVRTIARSTIKVTTVSQTAVANLIDLQSDMLTSAISDAALRLERASRADNIVELVRDQIEMIPATRARIVEDAQRAA
Ga0105096_105332152	3300009170	Freshwater Sediment	MQHRQERHMINQMQDFVAEQTSALTGQIQRFGKDSVETVREAVVGSADTLKALKSPVRVFARSGVKLTTVSQTAVASLIELQSDMLTSALSDAALRLERASRADNVVDLVRDQIELIPATRDRIVEDA
Ga0115028_110624412	3300009179	Wetland	MINQMQEFVAEQAAALTSQVEKMRKESVETVREAVVGSASSLKSLKSPVRTLARSGIKITTVSQTAVASLIELQSDMLTSAISDAALRLERASRADNLVELVREQVEMIPATRDRIVEDAQRA
Ga0115028_111747632	3300009179	Wetland	MQQMLRCSTHPNKEPTMIGQMQDFVAEQTAVLQDQVDKIRKDSVETVREAVVGSAENLKALKSPVRTIARSTVKVTSVSQTAVASLIELQSDMLTSAISDAALRLERASRADNIIELVREQVEMLPATRA
Ga0115028_116723731	3300009179	Wetland	MIGQMQEFIVEQASAWQDEVQKIRKESIETVREAVVGSAENLKSLKSPVRTIARSGVKLTSVSQTAVASLIELQSDMLTSAISDAALRLERASRAENLIDLVRDQFEMIPATRARIVEDAQRAVTIFKHAGRDLRGVATNLYE
Ga0075359_10311171	3300014266	Natural And Restored Wetlands	MQQLLQCSSRTNQEPQMIEQIQDFMSEQTAAISSQVKKFRKDSVETVRDAVSVSADNLKSLKSPVRVIARSGVKVTNVSQTAVASLIELQSDILTATLTGMALRLERAARADGIVDLMRDQIELTQATRGRV
Ga0075349_10526061	3300014305	Natural And Restored Wetlands	MQQLLQCSSSRTTRSTAMIEQIQDFVSEQTAAITSKVKQIREESTSTVRDAVVESAGNIKSLKSPVRVIARSGVKLTSVSQTAVASLIELQSDVLTSALSDVALRLERAARAD
Ga0075348_12304431	3300014319	Natural And Restored Wetlands	MLRCSTRPNEEPKMIAQMQDFVAEQTAVLQDQVDKIRKESVETVREAVVGSAENLKALKSPVRTIARSTVKVTTVSQTAVASLIELQSDMLTSAISDAALRLERASRADNIIELVREQVEMLPATRARIVEDAQR
Ga0210321_10413361	3300022384	Estuarine	MISQMQEFVVEQTSNLTDQVQKIRKGSVETVREAAVGSAEGLKALKSPIRQLARSSVKLTSVSQAAVAGLIDLQSDMVTSAITDAALRLERASRASSIIDLVRDQYE
Ga0124853_10988461	3300024056	Freshwater Wetlands	MISQMQDFVSETTSALTGQVQKIRKDSVETVREAVVGSADNLKSLKAPVRVFARSGVKLTTVSQTAVSSLIELQSDVLTSALSEAALRLEKAARAENVIELVRDQFEMLPATRARIVEEAQRAQRAVEIFKV
Ga0209398_10346033	3300025106	Groundwater	MIAQMQEFVSEQTAALTGQVEKFRKESVETVREAMAGSADNIKSLKAPVRVFARSGVKLASVSQTAVSSLIELQSDMLTSALSDVALRLERAARADSIFDLVRDQFEMLPATRTRVVEDAQRAVHIF
Ga0208539_10163602	3300026069	Natural And Restored Wetlands	MIEQIQDFVSEQTAAITSKVKQIRDESTTTVRDAVVESAGNIKSLKSPVRVIARSGVKLTSVSQTAVASLIELQSDVLTSALSDVALRLERAARADGIVDLVRDQYELAHATRGRVVEDAQRAMQIFKV
Ga0209392_11899081	3300027683	Freshwater Sediment	MINQMQDFVAEQTSALTGQIQRFGKDSVETVREAVVGSADTLKALKSPVRVFARSGVKLTTVSQTAVASLIELQSDMLTSALSDAALRLERASRADNVVDLVRDQIELIPATRDRIVEDA
Ga0209467_12516091	3300027719	Freshwater	MINQMQDFVAEQTSALTGQIQKFGKDSVETVREAVVGSADTLKSLKSPVRVFARSGVKLTTVSQTAVASLIELQSDMLTSALSDAALRLERASRADNVVDLVRDQIELIPATRD
Ga0209288_101097191	3300027762	Freshwater Sediment	MINQMQDFVAEQTSALTGQIQKLGKDSVETVREAVVGSADTLKALKAPVRVFARSGVKLTTVSQTAVASLIELQSDMLTSALSDAALRLERASRADNVVDLVRDQIE
Ga0209288_102410631	3300027762	Freshwater Sediment	MINQMQDFVAEQTSALTGQIQKLGKDSVETVREAVVGSADTLKALKSPVRVFARSGVKLTTVSQTAVASLIELQSDMLTSALSDAALRLERASRADNVVDLVRDQIELIPATRDRIVEDAQRAVQIF
Ga0209373_100475421	3300027796	Freshwater	MINQMQDFVAEQTSALTGQIQKFGKDSVETVREAVVGSADTLKSLKSPVRVFARSGVKLTTVSQTAVASLIELQSDMLTSALSDAALRLERASRADNVVDLVRDQIELIPATRDRIVEDAQRAVQIFKH
Ga0209800_102109841	3300027800	Freshwater	MINQMQDFVAEQTSALTGQIQKFGKDSVETVREAVVGSADTLKSLKSPVRVFARSGVKLTTVSQTAVASLIELQSDMLTSALSDAALRLERASRADNIVELVRDQ
Ga0209706_100612713	3300027818	Freshwater Sediment	MINQMQDFVAEQTSALTGQIQKLGKDSVETVREAVVGSADTLKALKAPVRVFARSGVKLTTVSQTAVASLIELQSDMLTSALSDAALRLERASRADNVVDLVRDQIELIPATRD
Ga0209262_106331591	3300027841	Freshwater	MIVQMQEFVAEQTAALTSQVEKMRKESVETVRGAATDSAENLKALKSPVRTLARSGIKVTAVSQTAVASLIDLQSDMLTAAISEAALRLERAARAENVLELVRDQIEMIPATRTRIVEDAQRAALIF
Ga0209397_100657191	3300027871	Wetland	MINQVQEFVAEQAAALSSQVEKMRKESVETVREAVVGSASGLKALKSPVRTLARSGIKITNVSQTAVASLIELQSDMLTSAISDAALRLERASRADNIVELVREQVEMIPATRDRIVE
Ga0209397_100794101	3300027871	Wetland	MIEQIQEFMSEQTSALSGQVQKFRKESAETVREAFVGSAENIKALKSPVRVFARSGVKLTTVSQTAVSNLIELQSDMLTSALSDVALRLERAARAENIVDLVRDQFEMVPATRARVVEDAQRAVTIFKVA
Ga0209397_100984181	3300027871	Wetland	MIDRMQEFVAEQTAVLQGQVEKIAKDSVETVRETVVGSAETLKALKSPVRTIARSTIKVTTVSQTAVASLIDLQSDMLTSAISDAALRLERASRAENIVDLFRDQIEMIPATRSRIVEDA
Ga0209293_102325422	3300027877	Wetland	MIAQMQEFVAEQTAVLQGQVEKIAKDSVETVRETVVGGAETLKSLKSPVRTIARSTIKVTNVSQTAVASLIDLQSDMLTSAISDAALRLERASRADNLLELVREQIEMIPATRDRIVEDAQRAAQIIKHAGRD
Ga0209293_103025891	3300027877	Wetland	MINQMQDFVAEQTSALTGQIQKFGKDSVETVREAVVGSADTLKALKSPVRVFARSGVKLTTVSQTAVASLIELQSDMLTSALSDAALRLERASRADNVVDLVRDQIELIPATRDR
Ga0209450_102219403	3300027885	Freshwater Lake Sediment	MINQMQDFVAEQTSALTGQIQKFGKDSVETVREAVVGSADTLKSLKSPVRVFARSGVKLTTVSQTAVASLIELQSDMLTSALSDAALRLERASRADNVVDLVRDQIELIPATRDR
Ga0209496_101378132	3300027890	Wetland	MIEQIQEFMSEQTSALSGQVQKFRKESAETVREAFVGSAENIKALKSPVRVFARSGVKLTTVSQTAVSNLIELQSDMLTSALSDVALRLERAARAENIVDLVRDQFEMVPATRARVVEDAQRAVTIFKVAGR
Ga0209496_108445471	3300027890	Wetland	MINQMQDFVAEQTSALTGQIQKFGKDSVETVREAVVGSADTLKALKSPVRVFARSGVKLTTVSQTAVASLIELQSDMLTSALSDAALRLERASRADNVVD
Ga0209254_110439611	3300027897	Freshwater Lake Sediment	MIEQIQEFVSEQTASISGQVRKFRKESAETVREAMVGSADNIKSFKTPIRVFARSGVKLTAVSQTAVSSFIELQSDMLTSAISDVALRLERASRAENVIDLVRDQFELIPATRTRVVEDA
Ga0209668_100894651	3300027899	Freshwater Lake Sediment	MIAQMQDFVAEQTAILQDQVEKIRKDSVETVREAVVGSAENLKALKSPVRTLARSGVKISAVSQNAVASLIELQSDVLTSALSDAALRLERASRADNIIELVR
Ga0209668_103596541	3300027899	Freshwater Lake Sediment	MIEQIQDFVSEQKAAITSQVEKFRKDSVETVRDAVSGSADNIKSLKSPVRVIARSGVKVTSVSQTAVASLIELNSDIVTSALSDVALRLERAARADGI
Ga0209253_108052332	3300027900	Freshwater Lake Sediment	MIEQIQEFMSEQTSALSGQVQKFRKESTETVREAFVGSAENIKALKSPVRVFARSGVKLTTVSQTAVSNLIELQSEMLTSALSDVALRLERAARADNIIDLVRDQFEMVPATRARVVEDAQRAVAIFKVAG
Ga0209079_102506451	3300027972	Freshwater Sediment	MIAQMQEFVAEQTAVLQGQVEKIAKESVETVRETVAGSAETLKSLKSPVRTIARSTIKVTTVSQTAVASLIDLQSDMLTSAISDAALRLERASRADNILELVREQIEMIPATRARIVEDAQRAATIFK
Ga0209391_102719602	3300027975	Freshwater Sediment	MINQMQDFVAEQTSALTGQIQRFGKDSVETVREAVVGSADTLKALKSPVRVFARSGVKLTTVSQTAVASLIELQSDMLTSALSDAALRLERASRADNVVDLVRDQIELIPATRDRIVEDAQRAVQIFK
Ga0316604_101917622	3300033406	Soil	MINQMQEFVAEQAAALTSQVEKMRKESVETVREAVVGSASSLKSLKSPVRTLARSGIKITTVSQTAVASLIELQSDMLTSAISDAALRLERASRADNLVELVREQVEMIPATRDRIVED
Ga0316604_104262242	3300033406	Soil	MIEQIQEFVSEQTAAISGQVRKFRKESAETVRETMVGSADNIKSLKTPIRVFARSGVKLTAVSQTAVSSFIELQSDMLTSAISDVALRLERASRAENVIDLV
Ga0316604_105103251	3300033406	Soil	MIGQMQDFVAEQTAVLQDQVDKIRKDSVETVREAVVGSAENLKALKSPVRTIARSTVKVTSVSQTAVASLIELQSDMLTSAISDAALRLERASRADNIIELVREQVEMLPATRARIVEDAQRAVTIFKH
Ga0316605_110778022	3300033408	Soil	MISQMQEFVADQTAAISSQVSKIRKESVETVREAAVGSAEGLKSLKSPVRTLARSGIKITNVSQTAVANLIELQSDMVTAAISEAALRLERASRAENLVELVREQFEMIPATRARIVEDAQRAKLIFKHAGRDLRGVATNL
Ga0316603_1000179212	3300033413	Soil	MINQMQEFVAEQAAALGSQLEKMRKESMETVREAAVDSASGLKSLKSPVRTLARSGIKITSVSQTAVASLIELQSDMLTSAISAAALRLERASRADNIVELVREQFEMIPATRDRLVEDAHRA
Ga0316603_111739561	3300033413	Soil	MIEQIQGFMSEQTSALTDQVQKFRKESAETVREAFVGSAENIKSLKTPVRVFARSGVKLTTVSQTAMSNLIELQSDVLTSALTDVALRLERAARADGLVDLVRD
Ga0316603_113216471	3300033413	Soil	MIGQMQEFIVEQASAWQDEVQKIRKESVETVREAVVGSAENLKSLKSPVRTIARSGVKLTSVSQTAVASLIELQSDMLTSAISDAALRLERASRADNIIELVREQFEMVPATRARIVEDAQRAALIFKHAGRDLRG
Ga0316603_117625811	3300033413	Soil	MISQMQEFVADQTAALSSQVSKIRKESVETVREAAVGSAEGLKALKSPVRTLARSGIKITNVSQTAVANLIELQSDMVTAAISEAALRLERASRAENLVELVREQFEMIP
Ga0316603_123520951	3300033413	Soil	MITQMQEFVAEQSAAIQGQFEKIAKESVENVRETVVGSAETLKSLKSPVRTIARSGVKLTTVSQTAVASLIELQSDVLTSAISDAALRLERASRAENLIDLVRDQFEMIPATRARIVEDAHRAAMIFRHA
Ga0316619_102775143	3300033414	Soil	MIAQMQDFVAEQTAVLQDQMDKIRKDSVETVREAVVGSAENLKALKSPVRTIARSTVKVTSVSQTAVASLIELQSDMLTSAISDAALRLERASRADNIIELV
Ga0316619_107635032	3300033414	Soil	MIAQMQDFVAEQTAILQDQVEKIRKDSVETVRDAVVGSAENLKALKSPVRTLARSGVKITSVSQNAVASLIELQSDVLTSALSDAALRLERASRADNIIELVREQVEMIPATRARMVEDAQRAALIFKHAGRDLRGVA
Ga0316622_1000573811	3300033416	Soil	MIAQMQDFVAEQTAILQDQVEKIRKDSVETVREAVVGSAENLKALKSPVRTLARSGVKISAVSQNAVASLIELQSDVLTSALSDAALRLERASRADNIIELVREQVEMIPATRARMVE
Ga0316622_1003081003	3300033416	Soil	MIAQMQDFVAEQTAILQDQVEKIRKDSVETVREAVVGSAENLKALKSPVRTLARSGVKISAVSQNAVASLIELQSDVLTSALSDAALRLERASRADNIIELVREQVEMIPATRARMVEDAQRAALIFKHAGRDLRGV
Ga0316622_1004307021	3300033416	Soil	MIAQMQDFVAEQTAVLQDQMDKIRKESVETVREAVVGSAENLKALKSPVRTIARSTVKVTTVSQTAVASLIELQSDMLTSAISDAALRLERAARADNIIELVRE
Ga0316622_1005406391	3300033416	Soil	MMTQMQDFVSETTSALTGQVQKIRRDSVETVREAVVGSADNLKSLKAPVRVFARSGVKLTTVSQTAVSSLIELQSDVLTSALSEAALRLEKAARAENVIELVRDQFEMLPATRARIVEE
Ga0316622_1018074381	3300033416	Soil	MIAQMQDFVAEQTAVLQDQMDKIRKDSVETVREAVVGSAENLKALKSPVRTIARSTVKVTSVSQTAVASLIELQSDMLTSAISDAALRLERASRADNIIELVREQVEMLPATR
Ga0316625_1002639401	3300033418	Soil	MIEQIQEFMSEQTSALSGQVQKFRKESAETVREAFVGSAENIKALKSPVRVFARSGVKLTTVSQTAVSNLIELQSDMLTSALSDVALRLERAARAENIVDLVRDQFEMVPATRARVVEDAQRAV
Ga0316625_1003572351	3300033418	Soil	MIEQIQEFVTDKASALTNQVEKIRKDSIGTVREAVVGGADNLKALKSPVRVVARSGVKVTTVSQTAVASLIELQSDVLTSALTDVAVRLERAAKADSLVDLVRDQIELGQATRGRIVEDA
Ga0316625_1010393501	3300033418	Soil	MIEQIQEFVSEQTAAISGQVRKFRKESAETVRETMVGSADNIKSLKTPIRVFARSGVKLTAVSQTAVSSFIELQSDMLTSAISDVALRLERASRAENVIDLVRDQFELIPATRTRVVEDAQRAAEILKIARRDLRAVAT
Ga0316601_1010268991	3300033419	Soil	MIAQMQDFVAEQTAILQDQVEKIRKDSVETVREAVVGSAENLKALKSPVRTLARSGVKISAVSQNAVASLIELQSDVLTSALSDAALRLERASRADNIIELVREQVEMIPATRARMVEDAQRAALIFKHAGRDLRGVA
Ga0316601_1013042241	3300033419	Soil	MINQMQDFVAEQTSALTGQIQKFGKDSVETVREAVVGSADTLKALKSPVRVFARSGVKLTTVSQTAVASLIELQSDVLTAALSDAALRLERASRADNVVDLVRDQIELIPATRARI
Ga0316601_1020470281	3300033419	Soil	MIAQMQDFVAEQTAVLQDQMDKIRKESVETVREAVVGSAENLKALKSPVRTIARSTVKVTTVSQTAVASLIELQSDMLTSAISDAALRLERASRADNIIELVREQVEMLPAT
Ga0316613_100206951	3300033434	Soil	MIAQMQEFVAEQTAVLQGQVEKIAKDSVETVRETVVGGAETLKSLKSPVRTIARSTIKVTNVSQTAVASLIDLQSDMLTSAISDAALRLERASRADNLLELVREQIEMIPATRDRIVEDAQRAAQIIKHAGRDLRG
Ga0316613_102976381	3300033434	Soil	MIAQMQDFVAEQTAVLQDQMDKIRKESVETVREAVVGSAENLKALKSPVRTIARSTVKVTTVSQTAVASLIELQSDMLTSAISDAALRLERASRADNIIELVREQVEMLPATRARIVEDAQRAVTIFKHAGRDLRGVATNLY
Ga0316613_106745532	3300033434	Soil	MIEQIQEFVSEQTAAISGQVRKFRKESAETVRETMVGSADNIKSLKTPIRVFARSGVKLTAVSQTAVSSFIELQSDMLTSAISDVALRLERASRAENVIDLVRDQF
Ga0316600_101077693	3300033481	Soil	MITQMQDFVAEQTAILQDQVEKIRKDSVETVRDAVVGSAENLKALKSPVRTLARSGVKITSVSQNAVASLIELQSDVLTSALSDAALRLERASRADNIIELVREQVEMIPATRARMVED
Ga0316600_102352101	3300033481	Soil	MIDQIQEFVSEQTAAISGQVRKFRKESAETVRETMVGSADNIKSLKTPIRVFARSGVKLTAVSQTAVSSFIELQSDMLTSAISDVALRLERASRAENVIDLVRDQFELIPATRTR
Ga0316600_103039531	3300033481	Soil	MMTQMQDFVSETTSALTGQVQKIRRDSVETVREAVVGSADNLKSLKAPVRVFARSGVKLTTVSQTAVSSLIELQSDVLTSALSEAALRLEKAARAENVIELVRDQFEMLPATRARIVEEAQRAVEIFKVAGRDMKN
Ga0316600_103188932	3300033481	Soil	MIDRMQEFVAEQTAVLQGQVEKIAKDSVETVRETVVGSAETLKALKSPVRTIARSTIKVTTVSQTAVASLIDLQSDMLTSAISDAALRLERASRADNIVDLFRDQIEMIPATRARIVEDAQRAALIFKHAGRDL
Ga0316627_1010597732	3300033482	Soil	MIAQMQEFVAEQTAALQGQVERFAKDSVETVRETVVGSAETLKSLKSPVRTLARSGVKITTVSQNAVVGLIELQSDMLTSAISDAALRLERASRAENIIDLVRDQFEMIPATRARIIEDAQRAALIFKHA
Ga0316629_106909491	3300033483	Soil	MINQMQEFVAEQAAALTSQVEKMRKESVETVREAVVGSASGLKALKSPVRTLARSGIKITNVSQTAVASLIELQSDMLTSAISDAALRLERASRADNIVELVREQVEMIPATRD
Ga0316629_107632812	3300033483	Soil	MIEQIQEFVSEQTAAISGQVRKFRKESAETVRETMVGSADNIKSLKTPIRVFARSGVKLTAVSQTAVSSFIELQSDMLTSAISDVALRLERASRAENVIDLVRDQFELIPATRTRVVEDAQRAA
Ga0316629_110804141	3300033483	Soil	MIAQMQDFVAEQTAVLQDQMDKIRKDSVETVREAVVGSAENLKALKSPVRTIARSTVKVTSVSQTAVASLIELQSDMLTSAISDAALRLERASRADNIVELVREQVEMLPATRAR
Ga0316626_111167471	3300033485	Soil	MMTQMQDFVSETTSALTGQVQKIRRDSVETVREAVVGSADNLKSLKAPVRVFARSGVKLTTVSQTAVSSLIELQSDVLTSALSEAALRLEKAARAENVIELVRDQFEMLPATRARIV
Ga0316626_111976531	3300033485	Soil	MIDQIQEFVSEQTAAISGQVRKFRKESAETVRETMVGSADNIKSLKTPIRVFARSGVKLTAVSQTAVSSFIELQSDMLTSAISDVALRLERASRAENVIDLVRDQFELIPATRTRVVEDAQRAAEIIKI
Ga0316626_113554591	3300033485	Soil	MIAQMQDFVAEQTAILQDQVEKIRKDSVETVREAVVGSAENLKALKSPVRTLARSGVKISAVSQNAVASLIELQSDVLTSALSDAALRLERASRADNIIELVREQVEMIPATRARMVEDAQRAALIFKHAGRDLRGVATSL
Ga0316626_113735131	3300033485	Soil	MINQIQEFVAEQTSAWQDEMQKIRDQSVETVRETAVGSAETLKSLKSPVRTLARSGVKVTAVSQTAVASLIELQSDMLTSAITAAALRLERASRADGLLDLVRDQIEMIPASRDRIVEDGKRAVHIFKVAGRDLRGV
Ga0316630_102570361	3300033487	Soil	MIAQMQDFVAEQTAVLQDQMDKIRKESVETVREAVVGSAENLKALKSPVRTIARSTVKVTTVSQTAVASLIELQSDMLTSAISDAALRLERASRADNIIELVREQVEMLPATRARIVEDAQRAVTIFKHAGRD
Ga0316630_115727541	3300033487	Soil	MINQMQEFVAEQAAALTSQVEKMRKESVETVREAVVGSASSLKSLKSPVRTLARSGIKITTVSQTAVASLIELQSDMLTSAISDAALRLERASRADNLVELVREQVEMIPATRDRIVEDAQRAALIFKHAGRDLRGVATNLY
Ga0316630_120583191	3300033487	Soil	MIAQMQDFVAEQTAVLQDQMDKIRKESVETVREAVVGSAENLKALKSPVRTIARSTVKVTTVSQTAVASLIELQSDMLTSAISDAALRLERASRADNIIELVREQVEMLPA
Ga0316621_100754583	3300033488	Soil	MISQMQEFVADQTAALSSQVSKIRKESVETVREAAVGSAEGLKALKSPVRTLARSGIKITNVSQTAVANLIELQSDMVTAAISEAALRLERASRAENLVELVREQFEMIPATRARIIEDAQRAKLIFKHAGRD
Ga0316621_101881431	3300033488	Soil	MISQMQEFVADQTAALSSQVSKIRKESVETVREAAVGSAEGLKALKSPVRTLARSGIKITNVSQTAVANLIELQSDMVTAAISEAALRLERASRAENLVELVREQFEMIPATR
Ga0316621_102861212	3300033488	Soil	MIEQIQEFMSEQTSALSGQVQKFRKESAETVREAFVGSAENIKALKSPVRVFARSGVKLTTVSQTAVSNLIELQSDMLTSALSDVALRLERAARAENIVDLVRDQFEMVPATRARVVED
Ga0316621_110202451	3300033488	Soil	MISQMQEFVADQTAAISSQVSKIRKESVETVREAAVGSAEGLKSLKSPVRTLARSGIKITNVSQTAVANLIELQSDMVTAAISEAALRLERASRAENLVELVREQFEMIPATRARIVEDAQRAKLIFKHA
Ga0316616_1001641883	3300033521	Soil	MISQMQEFVADQTAALSSQVSKIRKESVETVREAAVGSAEGLKALKSPVRTLARSGIKITNVSQTAVANLIELQSDMVTAAISEAALRLERASRAENLVELVREQFEMIPATRARIVEDAQRAKLIFKH
Ga0316616_1040841511	3300033521	Soil	MIGQMQDFVAEQTAVLQDQVDKIRKDSVETVREAVVGSAENLKALKSPVRTIARSTVKVTSVSQTAVASLIELQSDMLTSAISDAALRLERASRADNIIELVREQVEMLPAT
Ga0316617_1016527371	3300033557	Soil	MISQMQDFVSETTSALTGQVQKIRKDSVETVREAVVGSADNLKSLKAPVRVFARSGVKLTTVSQTAVSSLIELQSDVLTSALSEAALRLEKAARAENVIELVRDQFEMLPATRARIVEEAQRAVEIFKVAGR
Ga0373889_093916_1_420	3300034052	Sediment Slurry	MLNQIQEFVAEQTSAWQDEMQKIRTQSVETVRETAVGSAETLKSFKSPVRTIARSGVKITAVSQNAVASLIELQSDMLTSAITAAALRLERASRADGLVDLVRDQIEMIPASRDRIVEDGKRAVQIFKVAGLDLRGVAAN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F101435

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences