NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F101406

Metagenome / Metatranscriptome Family F101406

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F101406
Family Type Metagenome / Metatranscriptome
Number of Sequences 102
Average Sequence Length 86 residues
Representative Sequence MLPISRGFIAALGGIAMTLLAWFGSWAWPGWPASFAIDLLGFADFADFPRLAKSGVVVLLIIINVGTWAAVIRAAMLLVPKSTSPPAP
Number of Associated Samples 87
Number of Associated Scaffolds 102

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 39.22 %
% of genes near scaffold ends (potentially truncated) 20.59 %
% of genes from short scaffolds (< 2000 bps) 53.92 %
Associated GOLD sequencing projects 74
AlphaFold2 3D model prediction Yes
3D model pTM-score0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (93.137 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(15.686 % of family members)
Environment Ontology (ENVO) Unclassified
(47.059 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(50.000 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 52.59%    β-sheet: 0.00%    Coil/Unstructured: 47.41%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.57
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 102 Family Scaffolds
PF01212Beta_elim_lyase 18.63
PF11383DUF3187 14.71
PF02518HATPase_c 6.86
PF00149Metallophos 2.94
PF01797Y1_Tnp 2.94
PF00072Response_reg 1.96
PF13561adh_short_C2 1.96
PF07238PilZ 1.96
PF04203Sortase 1.96
PF00528BPD_transp_1 0.98
PF06971Put_DNA-bind_N 0.98
PF02321OEP 0.98
PF00082Peptidase_S8 0.98
PF01345DUF11 0.98
PF00437T2SSE 0.98
PF00069Pkinase 0.98
PF01266DAO 0.98
PF05973Gp49 0.98
PF13185GAF_2 0.98
PF05090VKG_Carbox 0.98
PF00656Peptidase_C14 0.98
PF00005ABC_tran 0.98
PF00271Helicase_C 0.98
PF03886ABC_trans_aux 0.98
PF12770CHAT 0.98
PF03279Lip_A_acyltrans 0.98
PF14542Acetyltransf_CG 0.98
PF13755Sensor_TM1 0.98
PF01436NHL 0.98
PF00795CN_hydrolase 0.98

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 102 Family Scaffolds
COG1167DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domainTranscription [K] 37.25
COG0076Glutamate or tyrosine decarboxylase or a related PLP-dependent proteinAmino acid transport and metabolism [E] 18.63
COG4992Acetylornithine/succinyldiaminopimelate/putrescine aminotransferaseAmino acid transport and metabolism [E] 18.63
COG3033TryptophanaseAmino acid transport and metabolism [E] 18.63
COG2873O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependentAmino acid transport and metabolism [E] 18.63
COG2008Threonine aldolaseAmino acid transport and metabolism [E] 18.63
COG1982Arginine/lysine/ornithine decarboxylaseAmino acid transport and metabolism [E] 18.63
COG1921Seryl-tRNA(Sec) selenium transferaseTranslation, ribosomal structure and biogenesis [J] 18.63
COG1104Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS familyAmino acid transport and metabolism [E] 18.63
COG0399dTDP-4-amino-4,6-dideoxygalactose transaminaseCell wall/membrane/envelope biogenesis [M] 18.63
COG0075Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucGAmino acid transport and metabolism [E] 18.63
COG0112Glycine/serine hydroxymethyltransferaseAmino acid transport and metabolism [E] 18.63
COG01567-keto-8-aminopelargonate synthetase or related enzymeCoenzyme transport and metabolism [H] 18.63
COG1003Glycine cleavage system protein P (pyridoxal-binding), C-terminal domainAmino acid transport and metabolism [E] 18.63
COG0436Aspartate/methionine/tyrosine aminotransferaseAmino acid transport and metabolism [E] 18.63
COG0520Selenocysteine lyase/Cysteine desulfuraseAmino acid transport and metabolism [E] 18.63
COG0626Cystathionine beta-lyase/cystathionine gamma-synthaseAmino acid transport and metabolism [E] 18.63
COG0515Serine/threonine protein kinaseSignal transduction mechanisms [T] 3.92
COG1943REP element-mobilizing transposase RayTMobilome: prophages, transposons [X] 2.94
COG1538Outer membrane protein TolCCell wall/membrane/envelope biogenesis [M] 1.96
COG3764Sortase (surface protein transpeptidase)Cell wall/membrane/envelope biogenesis [M] 1.96
COG1560Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)Lipid transport and metabolism [I] 0.98
COG3657Putative component of the toxin-antitoxin plasmid stabilization moduleDefense mechanisms [V] 0.98
COG4249Uncharacterized conserved protein, contains caspase domainGeneral function prediction only [R] 0.98
COG4261Predicted acyltransferase, LPLAT superfamilyGeneral function prediction only [R] 0.98
COG4679Phage-related protein gp49, toxin component of the Tad-Ata toxin-antitoxin systemDefense mechanisms [V] 0.98

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms93.14 %
UnclassifiedrootN/A6.86 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2088090008|P3_DRAFT_NODE_86840_len_1486_cov_15_949529All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1536Open in IMG/M
3300001991|JGI24743J22301_10117484All Organisms → cellular organisms → Bacteria581Open in IMG/M
3300002568|C688J35102_118425489Not Available558Open in IMG/M
3300002568|C688J35102_119895186All Organisms → cellular organisms → Bacteria806Open in IMG/M
3300004479|Ga0062595_102364094All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium526Open in IMG/M
3300005167|Ga0066672_10732562All Organisms → cellular organisms → Bacteria630Open in IMG/M
3300005177|Ga0066690_10179944All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1401Open in IMG/M
3300005184|Ga0066671_10926498All Organisms → cellular organisms → Bacteria551Open in IMG/M
3300005327|Ga0070658_10302726All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1363Open in IMG/M
3300005329|Ga0070683_100000017All Organisms → cellular organisms → Bacteria207189Open in IMG/M
3300005331|Ga0070670_100000233All Organisms → cellular organisms → Bacteria50749Open in IMG/M
3300005331|Ga0070670_100036402All Organisms → cellular organisms → Bacteria4235Open in IMG/M
3300005334|Ga0068869_100054700All Organisms → cellular organisms → Bacteria → Proteobacteria2906Open in IMG/M
3300005337|Ga0070682_100701639All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium811Open in IMG/M
3300005338|Ga0068868_100000120All Organisms → cellular organisms → Bacteria49449Open in IMG/M
3300005345|Ga0070692_10034564All Organisms → cellular organisms → Bacteria2554Open in IMG/M
3300005530|Ga0070679_101354193All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium658Open in IMG/M
3300005535|Ga0070684_101581483All Organisms → cellular organisms → Bacteria618Open in IMG/M
3300005543|Ga0070672_100351811All Organisms → cellular organisms → Bacteria → Proteobacteria1256Open in IMG/M
3300005561|Ga0066699_10914180All Organisms → cellular organisms → Bacteria612Open in IMG/M
3300005578|Ga0068854_100026331All Organisms → cellular organisms → Bacteria3997Open in IMG/M
3300006028|Ga0070717_10890670All Organisms → cellular organisms → Bacteria810Open in IMG/M
3300006032|Ga0066696_10061907All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2139Open in IMG/M
3300006034|Ga0066656_10070208All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2068Open in IMG/M
3300006237|Ga0097621_100103251All Organisms → cellular organisms → Bacteria2401Open in IMG/M
3300006237|Ga0097621_102397160All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium505Open in IMG/M
3300006358|Ga0068871_100662356All Organisms → cellular organisms → Bacteria → Proteobacteria954Open in IMG/M
3300006358|Ga0068871_101036736All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium765Open in IMG/M
3300006797|Ga0066659_10455328All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1018Open in IMG/M
3300006800|Ga0066660_10748117All Organisms → cellular organisms → Bacteria798Open in IMG/M
3300009036|Ga0105244_10355176All Organisms → cellular organisms → Bacteria → Proteobacteria675Open in IMG/M
3300009098|Ga0105245_10000039All Organisms → cellular organisms → Bacteria144455Open in IMG/M
3300009137|Ga0066709_103408224All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium577Open in IMG/M
3300009148|Ga0105243_10318109All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1417Open in IMG/M
3300009177|Ga0105248_12451189All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium594Open in IMG/M
3300009551|Ga0105238_10000001All Organisms → cellular organisms → Bacteria2036163Open in IMG/M
3300010335|Ga0134063_10625541All Organisms → cellular organisms → Bacteria550Open in IMG/M
3300010401|Ga0134121_10024938All Organisms → cellular organisms → Bacteria4813Open in IMG/M
3300010401|Ga0134121_12494424All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium559Open in IMG/M
3300011119|Ga0105246_10668639All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium906Open in IMG/M
3300011119|Ga0105246_11697385All Organisms → cellular organisms → Bacteria600Open in IMG/M
3300011269|Ga0137392_10646112All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium877Open in IMG/M
3300011271|Ga0137393_10041475All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium3554Open in IMG/M
3300012924|Ga0137413_11141414All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium618Open in IMG/M
3300012924|Ga0137413_11234930Not Available597Open in IMG/M
3300012925|Ga0137419_11570193All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium559Open in IMG/M
3300012960|Ga0164301_11537994Not Available549Open in IMG/M
3300013105|Ga0157369_10010702All Organisms → cellular organisms → Bacteria10438Open in IMG/M
3300013296|Ga0157374_10000021All Organisms → cellular organisms → Bacteria272840Open in IMG/M
3300013297|Ga0157378_10000054All Organisms → cellular organisms → Bacteria99226Open in IMG/M
3300013297|Ga0157378_10000453All Organisms → cellular organisms → Bacteria39234Open in IMG/M
3300013308|Ga0157375_10000004All Organisms → cellular organisms → Bacteria474935Open in IMG/M
3300013308|Ga0157375_10372102All Organisms → cellular organisms → Bacteria1595Open in IMG/M
3300014745|Ga0157377_10000023All Organisms → cellular organisms → Bacteria146600Open in IMG/M
3300014969|Ga0157376_10000019All Organisms → cellular organisms → Bacteria255553Open in IMG/M
3300015158|Ga0167622_1002431All Organisms → cellular organisms → Bacteria → Proteobacteria6821Open in IMG/M
3300015162|Ga0167653_1000415All Organisms → cellular organisms → Bacteria10813Open in IMG/M
3300015167|Ga0167661_1054164Not Available750Open in IMG/M
3300015190|Ga0167651_1090535All Organisms → cellular organisms → Bacteria588Open in IMG/M
3300015245|Ga0137409_10266044All Organisms → cellular organisms → Bacteria1518Open in IMG/M
3300015264|Ga0137403_10715950All Organisms → cellular organisms → Bacteria860Open in IMG/M
3300021358|Ga0213873_10004328All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2639Open in IMG/M
3300021362|Ga0213882_10235227All Organisms → cellular organisms → Bacteria758Open in IMG/M
3300021363|Ga0193699_10393201Not Available575Open in IMG/M
3300021384|Ga0213876_10025167All Organisms → cellular organisms → Bacteria3141Open in IMG/M
3300021420|Ga0210394_10000377All Organisms → cellular organisms → Bacteria98667Open in IMG/M
3300021478|Ga0210402_10000594All Organisms → cellular organisms → Bacteria39953Open in IMG/M
3300023021|Ga0233354_112393All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium543Open in IMG/M
3300024177|Ga0247686_1000172All Organisms → cellular organisms → Bacteria10354Open in IMG/M
3300024178|Ga0247694_1001190All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium4655Open in IMG/M
3300024245|Ga0247677_1007420All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1510Open in IMG/M
3300024246|Ga0247680_1000049All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium69337Open in IMG/M
3300024251|Ga0247679_1002706All Organisms → cellular organisms → Bacteria3108Open in IMG/M
3300024323|Ga0247666_1000197All Organisms → cellular organisms → Bacteria21963Open in IMG/M
3300024323|Ga0247666_1023271All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1318Open in IMG/M
3300024323|Ga0247666_1085792All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium626Open in IMG/M
3300024331|Ga0247668_1000026All Organisms → cellular organisms → Bacteria56952Open in IMG/M
3300024331|Ga0247668_1005148All Organisms → cellular organisms → Bacteria2806Open in IMG/M
3300025909|Ga0207705_10259010All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1328Open in IMG/M
3300025924|Ga0207694_10000001All Organisms → cellular organisms → Bacteria4078485Open in IMG/M
3300025925|Ga0207650_10000410All Organisms → cellular organisms → Bacteria38169Open in IMG/M
3300025925|Ga0207650_10012730All Organisms → cellular organisms → Bacteria5810Open in IMG/M
3300025927|Ga0207687_10000022All Organisms → cellular organisms → Bacteria223060Open in IMG/M
3300025940|Ga0207691_10808017All Organisms → cellular organisms → Bacteria → Proteobacteria788Open in IMG/M
3300025941|Ga0207711_11309547All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium667Open in IMG/M
3300025942|Ga0207689_10078885All Organisms → cellular organisms → Bacteria2706Open in IMG/M
3300025944|Ga0207661_10000004All Organisms → cellular organisms → Bacteria606391Open in IMG/M
3300025981|Ga0207640_10009411All Organisms → cellular organisms → Bacteria5471Open in IMG/M
3300026023|Ga0207677_10000122All Organisms → cellular organisms → Bacteria63627Open in IMG/M
3300026335|Ga0209804_1267161All Organisms → cellular organisms → Bacteria610Open in IMG/M
3300026550|Ga0209474_10053151All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2887Open in IMG/M
3300027164|Ga0208994_1011406All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1177Open in IMG/M
3300028146|Ga0247682_1009843Not Available1646Open in IMG/M
3300028146|Ga0247682_1016673All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1279Open in IMG/M
3300030521|Ga0307511_10002625All Organisms → cellular organisms → Bacteria18747Open in IMG/M
3300030991|Ga0073994_11568898All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1417Open in IMG/M
3300031057|Ga0170834_108368106Not Available538Open in IMG/M
3300031720|Ga0307469_11043794All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium765Open in IMG/M
3300032174|Ga0307470_10000117All Organisms → cellular organisms → Bacteria54912Open in IMG/M
3300032174|Ga0307470_10002642All Organisms → cellular organisms → Bacteria6842Open in IMG/M
3300032180|Ga0307471_100013684All Organisms → cellular organisms → Bacteria → Proteobacteria5598Open in IMG/M
3300032205|Ga0307472_101082328All Organisms → cellular organisms → Bacteria757Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil15.69%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil9.80%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil6.86%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere6.86%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere5.88%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil4.90%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere4.90%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil3.92%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere3.92%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere3.92%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere3.92%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.96%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.96%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.96%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.96%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.96%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.96%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.96%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.96%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.96%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.98%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.98%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Soil0.98%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.98%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.98%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.98%
Exposed RockEnvironmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock0.98%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.98%
Plant RootsHost-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots0.98%
EctomycorrhizaHost-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza0.98%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.98%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.98%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2088090008Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P3EnvironmentalOpen in IMG/M
3300001991Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2Host-AssociatedOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005184Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120EnvironmentalOpen in IMG/M
3300005327Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaGHost-AssociatedOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005345Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaGEnvironmentalOpen in IMG/M
3300005530Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaGEnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300009036Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaGHost-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300013105Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaGHost-AssociatedOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015158Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G1A, Ice margin)EnvironmentalOpen in IMG/M
3300015162Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-4c, rock/ice/stream interface)EnvironmentalOpen in IMG/M
3300015167Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-11b, vegetated hydrological feature)EnvironmentalOpen in IMG/M
3300015190Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-4a, rock/ice/stream interface)EnvironmentalOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300021358Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3Host-AssociatedOpen in IMG/M
3300021362Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09EnvironmentalOpen in IMG/M
3300021363Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2EnvironmentalOpen in IMG/M
3300021384Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9Host-AssociatedOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300023021Soil microbial communities from Shasta-Trinity National Forest, California, United States - GEON-Q76EnvironmentalOpen in IMG/M
3300024177Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK27EnvironmentalOpen in IMG/M
3300024178Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK35EnvironmentalOpen in IMG/M
3300024245Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK18EnvironmentalOpen in IMG/M
3300024246Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK21EnvironmentalOpen in IMG/M
3300024251Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK20EnvironmentalOpen in IMG/M
3300024323Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK07EnvironmentalOpen in IMG/M
3300024331Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09EnvironmentalOpen in IMG/M
3300025909Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025924Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)EnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300027164Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O3 (SPAdes)EnvironmentalOpen in IMG/M
3300028146Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK23EnvironmentalOpen in IMG/M
3300030521Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EMHost-AssociatedOpen in IMG/M
3300030991Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
P3_DRAFT_007712402088090008SoilMMLRMSRGFVATLGGVAMTLLAWYGSWAWPGWPASVAIDTLGRVISFPDSPHVTKAAFVVLLIVINVGAWAAVIRVAMLLLPRRGHR
JGI24743J22301_1011748423300001991Corn, Switchgrass And Miscanthus RhizosphereVMLPISRGFIAALGGIGMTLLAWFGSWAWPGWPASVAIDLLGKWGDFSELPRLEKSAIVILLIIINVGTWAAVFRAAMLLGRRSSSAARP*
C688J35102_11842548923300002568SoilMTLLAWFGSWAWPGWPASFAIDHLGFADFAELPRVAKSAVVVLLIIINVGTWAAAIRAAMLLVRKSTPASRP*
C688J35102_11989518613300002568SoilRGFVQWFLCVCQTDPMFRPSRGFIAALGGIAMTLLAWFGSWAWPGWPASFAIDLLGVTDFPGFPRLAKSAVVVLLIMINVGTWAAAFRTVMLLVGKSTSASRP*
Ga0062595_10236409413300004479SoilMLKVSRGFVASLFGIGMTLLAWFGSWAWPGWPASLALDVLGKYADFPDLPRPVKGTVVVLLIIINVGTWAALVRAAMLFLPRRAEA*
Ga0066672_1073256223300005167SoilMLPVSRGFLATLGGIAMTLLAWFGSWAWPGWPAAFAIDLLGFADFAELPRLAKSSIVVLLIIINVGTWAVILRAAMLLVRKSSSPTPP*
Ga0066690_1017994423300005177SoilMLPVSRGFLAALGGIAMTLLAWFGSWAWPGWPASFAIDLLGFADFAELPRLAKSSIVVLLIIINVGTWAIILRAAMLLVRKSSSTAPP*
Ga0066671_1092649813300005184SoilMTLLAWFGSWAWPGWPASFAIDLLGFADFAELPRLAKSGVIVLLIMINVGTWAVILRAAMLLVRKSSSTAPP*
Ga0070658_1030272623300005327Corn RhizosphereLSSGFCDTGRVIKISRGFIAALGGIGMTLLAWFGSWAWPGWPASLALDLLGKYAEFPELPRPVKATVVVLLIIINVGAWGGVIRAAMLLVPKQD*
Ga0070683_1000000171563300005329Corn RhizosphereVCQTERMLRVSRGFIAAIGGIAMTLLAWFGSWAWPGWPASFAIDLLGFADFADFPRYAKSAVVVLLIIINVGTWAAVIRAAMMLIRKSSSPTAP*
Ga0070670_10000023363300005331Switchgrass RhizosphereMVRVSRGFIAAIGGIAMTLLAWFGSWAWPGWPASFAIDLLGFADFADFPRYAKSAVVVLLIIINVGTWAAVIRAAMLLIRKSTSPTPP*
Ga0070670_10003640233300005331Switchgrass RhizosphereMLPVSRGFIAALGGVGMTLLAWFGSWAWPGWPASIAIDLLGKWGDFAELPRFQKSAVVILLIIINVGTWAAAFRAAMLLVRKSSSAALS*
Ga0068869_10005470023300005334Miscanthus RhizosphereVIKISRGFIAALGGIGMTLLAWFGSWAWPGWPASVALDVLGKYADFPDLPRPVKATVVVLLIIINVGVWAGLIRVAMLLLPKHD*
Ga0070682_10070163923300005337Corn RhizosphereMGGIGMTLLAWFGSWAWPGWPASLALDVLGKYADFPDLPRPVKATAVVLLIIINVGVWGGVIRAAMLLVPKHD*
Ga0068868_100000120103300005338Miscanthus RhizosphereVCQTERMVRVSRGFIAAIGGIAMTLLAWFGSWAWPGWPASFAIDLLGFADFADFPRYAKSAVVVLLIIINVGTWAAVIRAAMLLIRKSGSPTAP*
Ga0070692_1003456423300005345Corn, Switchgrass And Miscanthus RhizosphereMLPISRGFIAALGGIGMTLLAWFGSWAWPGWPASVAIDLLGKWGDFSELPRLEKSAIVILLIIINVGTWAAVFRAAMLLGRRSSSAARP*
Ga0070679_10135419323300005530Corn RhizosphereVIKISRGFIAALGGIGMTLLAWFGSWGWPGWPASLALDVLGKYADFPDLPRPVKATVVVLLIIINVGVWAGLIRVAMLLLPKHD*
Ga0070684_10158148313300005535Corn RhizosphereTLLAWFGSWAWPGWPASVTIDLLGRWGDFAELPRMQKSAVVVLLIIINVGTWAAVFRAAMLLGRKSSSGAPS*
Ga0070672_10035181113300005543Miscanthus RhizosphereGMTLLAWFGSWAWPGWPASLALDLLGKYAEFPELPRPVKATVVVLLIIINVGAWGGVIRAAMLLVPKQD*
Ga0066699_1091418013300005561SoilMTLLAWFGSWAWPGWPAAFTIDLLGFADFAELPRLAKSSIVVLLIIINVGTWAVILRAGMLLVRKSSSPTPP*
Ga0068854_10002633163300005578Corn RhizosphereMTLLAWFGSWAWPGWPASIAIDLLGFTDFAEFPRLAKSGVVVLLIIINVGTWAAVIHAALLLVRKSSSPAPP*
Ga0070717_1089067023300006028Corn, Switchgrass And Miscanthus RhizosphereMVRISRGFVAALGGIAMTLLAWFGPWAWPGWPASVAIDLLTRFIDYPETHLGRAGMLILLIIINVGLWAAVIRVLMLLSPKSDRALQS*
Ga0066696_1006190713300006032SoilMLPLSRGFLAALGGIAMTLLAWFGSWAWPGWPASFAIDLLGFADFAELPRLAKSSIVVLLIIINVGTWAVILRAGMLLVRKSSSPTPP*
Ga0066656_1007020823300006034SoilMTLLAWFGSWAWPGWPASFAIDLLGFTDFADFPRLAKSGVVVLLIMINVGTWAAVIRASMLLVRTSSSPAPP*
Ga0097621_10010325133300006237Miscanthus RhizosphereMTLLAWFGSWAWPGWPASFAIDLLGFADFADFPRYAKSAVVVLLIIINVGTWAAVIRAAMLLIRKSSSPTAP*
Ga0097621_10239716013300006237Miscanthus RhizosphereTDLSSGFCDTGRVIKISRGFIAALGGIGMTLLAWFGSWAWPGWPASVALDVLGKYADFPDLPRPVKATVVVLLIIINVGVWAGLIRVAMLLLPNHD*
Ga0068871_10066235613300006358Miscanthus RhizosphereRGFIAALGGIGMTLLAWFGSWAWPGWPASLALDLLGKYAEFPDLPRPVKATVVVLLIIINVGAWGGVIRAAMLLVPKQD*
Ga0068871_10103673613300006358Miscanthus RhizosphereVCQTDPMFSVSKGFIATLGGIAMTLLAWFGSWAWPGWPASFTIDLLGFADFADFPRFAKSAVVVLLIIINVGTWAAVFRAAMLLGRKSTSAGRS*
Ga0066659_1045532813300006797SoilMFLPSRGFIAALGGIAMTLLAWFGSWAWPGWPASFAIDLLGFADFAELPRLAKSSIVIVLIIINVGAWAAVIRAAMMLVRKSTPASRS*
Ga0066660_1074811713300006800SoilMLPVSRGFLAALGGIAMTLVAWFGSWAWPGWPASFAIDLLGFADFAELPRLAKSSIVVLLIIINVGTWAVILRAAMLLVRKSSSPTPP*
Ga0105244_1035517623300009036Miscanthus RhizosphereGRVIKISRGFIAALGGIGMTLLAWFGSWAWPGWPASLALDVLGKYAEFPELPRPVKATVVVLLIIINVGAWGGVIRAAMLLVPKQD*
Ga0105245_10000039293300009098Miscanthus RhizosphereMLPVSRGFIAALGGIGMTLLAWFGSWAWPGWPASIAIDLLGKWGDFAELPRLQKSAIVVLLIMINVGTWAAAFRAAMLIVRKSSSAAPS*
Ga0066709_10340822413300009137Grasslands SoilMLRLSRGFIAALGGIAMTLLAWFGSWAWPGWPASFAIDLLGFTDFAEFPRLAKSAVVVALIIINVGTWAAVI
Ga0105243_1031810913300009148Miscanthus RhizosphereLLAWFGSWAWPGWPASLALDLLGKYADFPDLPRPVKATVVVLLININVGVWGGVIRAAMLLVPKHD*
Ga0105248_1245118923300009177Switchgrass RhizosphereMRLVIVGIRRRNDAAEATDLSSGFCDTGRVIKISRGFMAAIGGIGMTLLAWFGSWAWPGWPASLALDVLGKYAEFPDLPRPVKATAVVLLIIINVGVWGGVIRAAMLLVPKHD*
Ga0105238_1000000112343300009551Corn RhizosphereVLPLSRGFIAALGGIAMTLLAWFGSWAWPGWPASIAIDLLGFTDFAEFPRFAKSGVVVLLIIINVGTWAAVIRAAMLLVRKSTSPAPP*
Ga0134063_1062554123300010335Grasslands SoilMLPISRGCVAALGGIAMTLLAWCGSWAWPGWPASFAIDLLGFTDFADFPRLAKSSVVVLLIIINVGTWAAAFRAAMMLVRTSAPAPRS*
Ga0134121_1002493833300010401Terrestrial SoilMVRVSRGFIAAIGGIAMTLLAWFGSWAWPGWPASFAIDLLGFADFADFPRYAKSGVVVLLIIINVGTWAAVIRAAMLLVRKSSSATAP*
Ga0134121_1249442423300010401Terrestrial SoilATDLSSGFCDTGRVIKISRGFMAAMGGVGMTLLAWFGSWAWPGWPASLALDVLGRYAEFPDLPRPVKATAVVLLIIINVGVWGGVIRAAMLLVSKHD*
Ga0105246_1066863913300011119Miscanthus RhizosphereDAAEGTDLSSGFCDTARVIKISRGFIAALGGIGMTLLAWFGSWAWPGWPASLALDVLGRYAEFPDLPRPVKATAVVLLIIINVGVWGGVIRAAMLLVPKHD*
Ga0105246_1169738513300011119Miscanthus RhizosphereTDPMFSVSKGFIATLGGIAMTLLAWFGSWAWPGWPASFTIDLLGFADFADFPRYAKSAVVVLLIIINVGTWAAVIRAAMLLIRKSSSPTAP*
Ga0137392_1064611223300011269Vadose Zone SoilMLKVSRGFIAALGGVGMTLLAWFGSWAWPGWPASVAIDLLERFADFPDLSRPVKSVVVVLLIMINVGTWAGVFRAAMLLLPRRVEA*
Ga0137393_1004147523300011271Vadose Zone SoilMLKVSRGFIAALGGVGMTLLAWFGSWAWPGWPASVAIDLLERFADFPDLSRPVKSVMVVLLIIINVGTWAGVFRAAMLLLPRRVEA*
Ga0137413_1114141423300012924Vadose Zone SoilMRHYRVLKVSRGFVASLFGIGMTLLAWFGSWAWPGWPASLALDVLGKYADFPELPRPVKATVVVALIIINVGVWAILIRTAMLLIPRRKSASIPQP*
Ga0137413_1123493023300012924Vadose Zone SoilMFSVSRGFIAALGGIAMTLLAWYGSWAWPGWPASVAIDLIGRFCDFADLPRITKSIVVVLLIIINVGTWAGVIRAAMLLLPARTSASNVRS*
Ga0137419_1157019323300012925Vadose Zone SoilISRGFIAALGGIGMTLLAWFGSWAWPGWPASLALDVLGKYADFPDLPRPVKATVVVLLIIINVGVWGGVIRAAMLLVPKHD*
Ga0164301_1153799423300012960SoilMFRVSKGFIATLGGIAMTLLAWFGSWAWPGWPASFTIDLLGFANFADFPRFAKSAVVVLLIIINVGTWAAVIRAAMLLIRKSSSPTPP*
Ga0157369_1001070233300013105Corn RhizosphereMLRVSRGFIAAIGGIAMTLLAWFGSWAWPGWPASFAIDLLGFADFADFPRYAKSAVVVLLIIINVGTWAAVIRAAMMLIRKSSSPTPP*
Ga0157374_100000211123300013296Miscanthus RhizosphereVLPLSRGFIAALGGIAMTLLAWFGSWAWPGWPASIAIDLLGFTDFAEFPRLAKSGVVVLLIIINVGTWAAVIRAAMLLVRKSSSPAPP*
Ga0157378_10000054383300013297Miscanthus RhizosphereMRLVIVGIRRRNDAAEATDLSSGFCDTGRVIKISRGFIAAMGGIGMTLLAWFGSWAWPGWPASLALDVLGKYAEFPDLPRPVKATAVVLLIIINVGVWGGVIRAAMLLVPKHD*
Ga0157378_1000045373300013297Miscanthus RhizosphereLSSGFCDTGRVIKISRGFIAALGGIGMTLLAWFGSWAWPGWPASLALDLLGKYADFPDLPRPVKATVVVLLIIINVGVWGGVIRAAMLLVPKHD*
Ga0157375_10000004883300013308Miscanthus RhizosphereLSSGFCDTGRVIKISRGFIAALGGIGMTLLAWFGSWAWPGWPASLALDVLGKYAEFPELPRPVKATVVVLLIIINVGAWGGVIRAAMLLVPKQD*
Ga0157375_1037210233300013308Miscanthus RhizosphereMFRVSKGFIATLGGIAMTLLAWFGSWAWPGWPASFAIDLLGFADFADFPRFAKSAVVVLLIIINVGTWAAVIRAAMLLIRKSSSPTPP*
Ga0157377_100000231113300014745Miscanthus RhizosphereMTLLAWFGSWAWPGWPASIAIDLLGFTDFAEFPRLAKSGVVVLLIIINVGTWAAVIRAAMLLVRKSSSPAPP*
Ga0157376_10000019953300014969Miscanthus RhizosphereMVRVSRGFIAAIGGIAMTLLAWFGSWAWPGWPASFAIDLLGFADFADFPRYAKSAVVVLLIIINVGTWAAVIRAAMMPIRKSSSPTAP*
Ga0167622_100243173300015158Glacier Forefield SoilMRHPSRGFIATLGGIAMTLLAWFGSWAWPGWPASFAIDHLGFADFAELPRLAKSAVVVLLIIINVGTWAAILRAAMLLIRKSASPAPP*
Ga0167653_100041583300015162Glacier Forefield SoilMLPISRGFIAALGGIAMTLLAWFGSWAWPGWPASFAIDLLGFADFADFPRLAKSGVVVLLIIINVGTWAAVIRAAMLLVPKSTSPPAP*
Ga0167661_105416413300015167Glacier Forefield SoilMRHYRVLKVSRGFVASLFGIGMTLLAWFGSWAWPGWPASLALDVLGKYADFPDLPRPVKGTVVVLLIIINVGTWALLIRLAMLLLPRRAEA*
Ga0167651_109053513300015190Glacier Forefield SoilPRSQVCQTDLMRRPSRGFVAALGGIAMTLLAWFGSWAWPGWPASFAIDHLGFADFAELPRVAKSAVVVLLIIINVGTWAAAIRAAMLLVRESASPAQP*
Ga0137409_1026604433300015245Vadose Zone SoilMFLPSRGFLAALGGIAMTLLAWFGSWAWPGWPASFAIDLLGFADFAELPRLAKSSIVVLLIIINVGAWAAVIRAAMMLVRKSTPASRS*
Ga0137403_1071595013300015264Vadose Zone SoilMMHRMSRGFVATLGGVGMTLLAWYGSWAWPGWPASVAIDLLVRVSSYPDLPHTVKAAVVVLLIVINVGVWAAIFRVAMMMLPVRKSE*
Ga0213873_1000432823300021358RhizosphereMLPVSRGFLSALGGIGMTLLAWFGSWAWPGWPASFAIDLLGFTDFAEFPRLAKSGVVVLLIIINVGTWAAVIRGALLLVRKSSSPVPP
Ga0213882_1023522713300021362Exposed RockRGFLSALGGIAMTLLTWFGSWAWPGWPASFAIDLLGFADFAEFPRFAKSGVVVLLIIINVGTWAAVIRAALLLVRKSGSPVPP
Ga0193699_1039320113300021363SoilMRASQGFIATLGGVALTLLAWFGSWVWPGWPASFALDLLGHYSSFPDLPRFAKVATVVMLIVINVGTWALVIRAAMQLLPRRGQR
Ga0213876_1002516733300021384Plant RootsMVPISRGFLSALGGIAMTLLTWFGSWAWPGWPASFAIDLLGFADFAEFPRFAKSGVVVLLIIINVGTWAAVIRAALLLVRKSGSPVPP
Ga0210394_10000377863300021420SoilMLKVSRGFIAALGGVGMTLLAWYGSWAWPGWPASVAIDLLERFADFPDLSHLARSVVVVLLIIINVGTWAMVLRAVMLLVPRRVEA
Ga0210402_10000594343300021478SoilVLKVSRGFAASLFGIGMTLLAWFGSWAWPGWPASLALDVLAKYADFPDLPRTVKGMVVVLLIIINVGTWAALIRAAMLLLPRRAAA
Ga0233354_11239323300023021SoilTDRMLKVSRGFVASLFGIGMTLLAWFGSWAWPGWPASLALDVLGKYADFPDLPRPVKGTVVVLLIIINVGTWAALIRAAMLLIPRRAEA
Ga0247686_100017243300024177SoilMLKLSRGFVASLFGIGMTLLAWFGSWAWPGWPASLALDVLGKYADFPDLPRPVKGTVVVLLIIINVGTWAALVRAAMLFLPRRAEA
Ga0247694_100119033300024178SoilMLKVSRGFVAALGGVGMTLLAWYGSWAWPGWPASVAIDLLGRFTDFSDLPHLAKAIVVVLLIIINVGVWALLFRALMLLVPRRIEA
Ga0247677_100742023300024245SoilMSRGFVATLGGIALTLLAWFGSWVWPGWPASFALDALGHYSAFPDLPRAAKVAVVVGLIVINVGTWAVVIRGLMLLLRRVFLIRR
Ga0247680_1000049223300024246SoilMLKVSRGFVASLFGIGMTLLAWFGSWAWPGWPASLALDVLGKYADFPDLPRPVKGTVVVLLIIINVGTWAALVRAAMLFLPRRAEA
Ga0247679_100270623300024251SoilMSRGFVATLGGIALTLLAWFGSWVWPGWPASFALDALGHYSAFPDLPRAAKVAVVVGLIVINVGTWAVVIRGLMLLLRRSFFIRR
Ga0247666_1000197153300024323SoilMSRGFVATLGGVALTLLAWFGSWVWPGWPASFALDALGHYSAFPELPRAAKVAVVVGLIVINVGTWAVVIRVAMLLLRRGVFIRR
Ga0247666_102327113300024323SoilMRKVSRGFVASLFGIGMTLLAWFGSWAWPGWPASLALDVLGKYADFPDLPRPVKGTVVVLLIIINVGTWAVLVRAAMLFLPRRAEA
Ga0247666_108579223300024323SoilMSRGFVATLGGIALTLLAWFGSWVWPGWPASFALDALGHYSAFPDLPRAAKVAVVVGLIVINVGTWAV
Ga0247668_1000026343300024331SoilMRKVSRGFVASLFGIGMTLLAWFGSWAWPGWPASLALDVLGKYADFPDLPRPVKGTVVVLLIIINVGTWAALVRAAMLFLPRRAEA
Ga0247668_100514843300024331SoilMSRGFVATLGGIALTLLAWFGSWVWPGWPASFALDALGHYSAFPDLPRAAKVAVVVGLIVINVGTWAVVIRVVMLLLRRSFFIRR
Ga0207705_1025901023300025909Corn RhizosphereLSSGFCDTGRVIKISRGFIAALGGIGMTLLAWFGSWAWPGWPASLALDLLGKYAEFPELPRPVKATVVVLLIIINVGAWGGVIRAAMLLVPKQD
Ga0207694_1000000122733300025924Corn RhizosphereVLPLSRGFIAALGGIAMTLLAWFGSWAWPGWPASIAIDLLGFTDFAEFPRFAKSGVVVLLIIINVGTWAAVIRAAMLLVRKSTSPAPP
Ga0207650_10000410283300025925Switchgrass RhizosphereMTLLAWFGSWAWPGWPASFAIDLLGFADFADFPRYAKSAVVVLLIIINVGTWAAVIRAAMLLIRKSTSPTPP
Ga0207650_1001273033300025925Switchgrass RhizosphereMLPVSRGFIAALGGVGMTLLAWFGSWAWPGWPASIAIDLLGKWGDFAELPRFQKSAVVILLIIINVGTWAAAFRAAMLLVRKSSSAALS
Ga0207687_100000221333300025927Miscanthus RhizosphereMLPVSRGFIAALGGIGMTLLAWFGSWAWPGWPASIAIDLLGKWGDFAELPRLQKSAIVVLLIMINVGTWAAAFRAAMLIVRKSSSAAPS
Ga0207691_1080801723300025940Miscanthus RhizosphereGGIGMTLLAWFGSWAWPGWPASLALDLLGKYAEFPDLPRPVKATVVVLLIIINVGAWGGVIRAAMLLVPKQD
Ga0207711_1130954723300025941Switchgrass RhizosphereMTLLAWFGSWAWPGWPASLALDVLGKYAEFPDLPRPVKATAVVLLIIINVGVWGGVIRAAMLLVPKHD
Ga0207689_1007888523300025942Miscanthus RhizosphereVIKISRGFIAALGGIGMTLLAWFGSWAWPGWPASVALDVLGKYADFPDLPRPVKATVVVLLIIINVGVWAGLIRVAMLLLPKHD
Ga0207661_100000041963300025944Corn RhizosphereVCQTERMLRVSRGFIAAIGGIAMTLLAWFGSWAWPGWPASFAIDLLGFADFADFPRYAKSAVVVLLIIINVGTWAAVIRAAMMLIRKSSSPTAP
Ga0207640_1000941163300025981Corn RhizosphereMTLLAWFGSWAWPGWPASIAIDLLGFTDFAEFPRLAKSGVVVLLIIINVGTWAAVIHAALLLVRKSSSPAPP
Ga0207677_10000122433300026023Miscanthus RhizosphereLSRGFFVVCQTERMVRVSRGFIAAIGGIAMTLLAWFGSWAWPGWPASFAIDLLGFADFADFPRYAKSAVVVLLIIINVGTWAAVIRAAMLLIRKSGSPTAP
Ga0209804_126716113300026335SoilMLPISRGFLAALGGIAMTLLAWFGSWAWPGWPAAFAIDLLGFADFAELPRLAKSSVVVLLIIINVGTWALVLRAAMLLVRKSSSTAPP
Ga0209474_1005315143300026550SoilMLPLSRGFLAALGGIAMTLLAWFGSWAWPGWPASFAIDLLGFADFAELPRLAKSSIVVLLIIINVGAWAVILRAAMLLVRKSTS
Ga0208994_101140633300027164Forest SoilMSRGFIAVLGGVAMTLLAWFGSWAWPGWPASVSLDLLARFADFPDLPRMVKAAVVVALIVINVGVWAGLFRLAMLLVPRRVEA
Ga0247682_100984333300028146SoilMRKVSRGFVASLFGIGMTLLAWFGSWAWPGWPASLALDVLGKYADFPDLPSPVKGTVVVLLIIINVGTWAALVRVAMLFLPRRAEA
Ga0247682_101667323300028146SoilMRKVSRGFVASLFGIGMTLLAWFGSWAWPGWPASLALDVLGRYADFPDLPRPVKGTVVVLLIIINVGTWAALVRAVMLFLPRRAES
Ga0307511_1000262533300030521EctomycorrhizaMDAAMKRPFISRGFIAALGGIGMTLLAWYGSWAWPGWPASVTIDLLGRFADFSELPRGTKAVAVVLLIIINVGVWAAMIRALLLLLPRRVET
Ga0073994_1156889823300030991SoilMLPVSRGFIAALGGIAMTLLAWFGSWAWPGWPASSAIDLLGFADFAEFPRLAKSGVVVLLIIINVGTWAAVIRAAMMLVRKSPSPGPP
Ga0170834_10836810613300031057Forest SoilMFALSRGFIAALGGIAITLLAWYGSWAWPGWPAGVAIDLIGRFSDFADLPRLTKSIVVVLLIIINVGTWAGLIRLLMLLLPVRKSASGVRS
Ga0307469_1104379423300031720Hardwood Forest SoilMLKVSRGFIAALGGVGMTLLAWFGSWAWPGLPASVAIDLLGRFGDFPDLPRFEKSVVVILLIIVNVGAWAGVFRLAMLLLPRRVEG
Ga0307470_10000117373300032174Hardwood Forest SoilMSRGFVATLGGIALTLLAWFGSWVWPGWPANFALDALGHYSAFPELPRAAKVAVVVGLIVINVGTWAVVLRVAMLLLRRSFFIRR
Ga0307470_1000264213300032174Hardwood Forest SoilLRSICVIRGWFFMLRVSRGFIAALGGVGMTLLAWFGSWAWPGLPASAAIDLLGRFGDFPDLPRFEKSVVVILLIIINVGTWAVVFRLAMLLVPRRVEG
Ga0307471_10001368493300032180Hardwood Forest SoilMLRVSRGFIAALGGVGMTLLAWFGSWAWPGLPASAAIDLLGRFGDFPDLPRFEKSVVVILLIIINVGTWAVVFRLAMLLVPRRVEG
Ga0307472_10108232823300032205Hardwood Forest SoilVWGVGVEPYTDWVLRVSREFIAALGGVGMTLLAWFGSWAWPGWPASVAIDLLERFADFPDLSRPVKSVVVVLLIIINVGTWAGVFRAAMLLLPRRVKA

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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