Metagenome Family F101295

Basic Information
Family ID	F101295
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	46 residues
Representative Sequence	LKAHIVQPEDIAYIWEQVAPLLERVKEHSEGELETDDFLEPLTH
Number of Associated Samples	73
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	85.00 %
% of genes near scaffold ends (potentially truncated)	19.61 %
% of genes from short scaffolds (< 2000 bps)	14.71 %
Associated GOLD sequencing projects	60
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (90.196 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (46.078 % of family members)
Environment Ontology (ENVO)	Unclassified (98.039 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (94.118 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 47.73% β-sheet: 0.00% Coil/Unstructured: 52.27%
Feature Viewer

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Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF09636	XkdW	4.90

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.20 %
All Organisms	root	All Organisms	9.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.20 %
cellular organisms	root	All Organisms → cellular organisms	6.86 %
Viruses	superkingdom	All Organisms → Viruses	2.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.20 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	6.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.20 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.20 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.94 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.20 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	5.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.94 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.20 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	5.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.94 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.20 %
unclassified Rhodospirillaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae	5.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.94 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.20 %
Rhodospirillaceae bacterium TMED8	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	5.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.94 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002231\|KVRMV2_101695846	Not Available	623	Open in IMG/M
3300002511\|JGI25131J35506_1001351	All Organisms → Viruses → Predicted Viral	3769	Open in IMG/M
3300006339\|Ga0068481_1195823	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	1088	Open in IMG/M
3300006339\|Ga0068481_1302407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	1082	Open in IMG/M
3300006738\|Ga0098035_1003289	Not Available	7352	Open in IMG/M
3300006753\|Ga0098039_1229045	Not Available	627	Open in IMG/M
3300007963\|Ga0110931_1232806	Not Available	548	Open in IMG/M
3300008216\|Ga0114898_1200585	Not Available	554	Open in IMG/M
3300008217\|Ga0114899_1028411	All Organisms → Viruses → Predicted Viral	2106	Open in IMG/M
3300009413\|Ga0114902_1037558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	1461	Open in IMG/M
3300010153\|Ga0098059_1284845	Not Available	633	Open in IMG/M
3300010155\|Ga0098047_10002630	Not Available	7353	Open in IMG/M
3300017775\|Ga0181432_1104252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	847	Open in IMG/M
3300021442\|Ga0206685_10113557	Not Available	898	Open in IMG/M
3300025046\|Ga0207902_1027833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	684	Open in IMG/M
3300025118\|Ga0208790_1014202	All Organisms → Viruses → Predicted Viral	2812	Open in IMG/M
3300025280\|Ga0208449_1056587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	1032	Open in IMG/M
3300025300\|Ga0208181_1080055	Not Available	639	Open in IMG/M
3300028018\|Ga0256381_1038612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	755	Open in IMG/M
3300032360\|Ga0315334_11417802	Not Available	597	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	87.25%
Unclassified	Environmental → Aquatic → Marine → Unclassified	2.94%
Strait	Environmental → Aquatic → Marine → Strait	2.94%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.96%
Pelagic	Environmental → Aquatic → Marine → Pelagic	1.96%
Coastal	Environmental → Aquatic → Marine → Coastal	0.98%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	0.98%
Volcanic	Environmental → Aquatic → Marine → Volcanic	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	84.31%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	2.94%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	2.94%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	1.96%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	1.96%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	1.96%
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	0.98%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.98%
Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment	0.98%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	46.08%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	34.31%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	2.94%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	1.96%
Marine Oceanic	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic	1.96%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	1.96%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	1.96%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	1.96%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	1.96%
Background Seawater	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Background Seawater	0.98%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	0.98%
Filtered Seawater	Environmental → Aquatic → Marine → Unclassified → Unclassified → Filtered Seawater	0.98%
Marine Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment	0.98%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001735	Marine viral communities from the Pacific Ocean - LP-45	Environmental	Open in IMG/M
3300002231	Marine sediment microbial communities from Santorini caldera mats, Greece - red mat	Environmental	Open in IMG/M
3300002484	Marine viral communities from the Pacific Ocean - ETNP_2_130	Environmental	Open in IMG/M
3300002511	Marine viral communities from the Pacific Ocean - ETNP_2_1000	Environmental	Open in IMG/M
3300005520	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV251	Environmental	Open in IMG/M
3300006339	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_3_0500m	Environmental	Open in IMG/M
3300006736	Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG	Environmental	Open in IMG/M
3300006738	Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG	Environmental	Open in IMG/M
3300006752	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG	Environmental	Open in IMG/M
3300006753	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG	Environmental	Open in IMG/M
3300006754	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG	Environmental	Open in IMG/M
3300006789	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG	Environmental	Open in IMG/M
3300006926	Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaG	Environmental	Open in IMG/M
3300007756	Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample CTDBack_2015_DNA CLC_assembly	Environmental	Open in IMG/M
3300007963	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2)	Environmental	Open in IMG/M
3300008050	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG	Environmental	Open in IMG/M
3300008216	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar	Environmental	Open in IMG/M
3300008217	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215	Environmental	Open in IMG/M
3300008219	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05	Environmental	Open in IMG/M
3300008220	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_908	Environmental	Open in IMG/M
3300009413	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12	Environmental	Open in IMG/M
3300009418	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17	Environmental	Open in IMG/M
3300009481	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG	Environmental	Open in IMG/M
3300009602	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_231	Environmental	Open in IMG/M
3300009603	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_904	Environmental	Open in IMG/M
3300009604	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16	Environmental	Open in IMG/M
3300009605	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9	Environmental	Open in IMG/M
3300009620	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_51	Environmental	Open in IMG/M
3300009622	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3321_4155	Environmental	Open in IMG/M
3300010151	Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaG	Environmental	Open in IMG/M
3300010153	Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaG	Environmental	Open in IMG/M
3300010155	Marine viral communities from the Subarctic Pacific Ocean - 12_ETSP_OMZ_AT15267 metaG	Environmental	Open in IMG/M
3300017702	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_10 viral metaG	Environmental	Open in IMG/M
3300017703	Marine viral communities from the Subarctic Pacific Ocean - ?Lowphox_02 viral metaG	Environmental	Open in IMG/M
3300017718	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_11 viral metaG	Environmental	Open in IMG/M
3300017757	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22	Environmental	Open in IMG/M
3300017775	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17	Environmental	Open in IMG/M
3300020327	Marine microbial communities from Tara Oceans - TARA_B100001964 (ERX556115-ERR599070)	Environmental	Open in IMG/M
3300020398	Marine microbial communities from Tara Oceans - TARA_B100000949 (ERX555993-ERR599072)	Environmental	Open in IMG/M
3300021442	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 200m 12015	Environmental	Open in IMG/M
3300022169	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (v3)	Environmental	Open in IMG/M
3300025045	Marine viral communities from the Pacific Ocean - LP-46 (SPAdes)	Environmental	Open in IMG/M
3300025046	Marine viral communities from the Pacific Ocean - LP-45 (SPAdes)	Environmental	Open in IMG/M
3300025050	Marine viral communities from the Pacific Ocean - LP-54 (SPAdes)	Environmental	Open in IMG/M
3300025052	Marine viral communities from the Pacific Ocean - LP-37 (SPAdes)	Environmental	Open in IMG/M
3300025069	Marine viral communities from the Pacific Ocean - LP-38 (SPAdes)	Environmental	Open in IMG/M
3300025097	Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaG (SPAdes)	Environmental	Open in IMG/M
3300025108	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes)	Environmental	Open in IMG/M
3300025109	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG (SPAdes)	Environmental	Open in IMG/M
3300025112	Marine viral communities from the Pacific Ocean - ETNP_2_130 (SPAdes)	Environmental	Open in IMG/M
3300025118	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG (SPAdes)	Environmental	Open in IMG/M
3300025122	Marine viral communities from the Pacific Ocean - ETNP_2_300 (SPAdes)	Environmental	Open in IMG/M
3300025125	Marine viral communities from the Pacific Ocean - ETNP_2_1000 (SPAdes)	Environmental	Open in IMG/M
3300025241	Marine viral communities from the Deep Pacific Ocean - MSP-121 (SPAdes)	Environmental	Open in IMG/M
3300025248	Marine viral communities from the Deep Pacific Ocean - MSP-118 (SPAdes)	Environmental	Open in IMG/M
3300025264	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12 (SPAdes)	Environmental	Open in IMG/M
3300025270	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_904 (SPAdes)	Environmental	Open in IMG/M
3300025274	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_51 (SPAdes)	Environmental	Open in IMG/M
3300025277	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16 (SPAdes)	Environmental	Open in IMG/M
3300025280	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17 (SPAdes)	Environmental	Open in IMG/M
3300025293	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s2 (SPAdes)	Environmental	Open in IMG/M
3300025296	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_231 (SPAdes)	Environmental	Open in IMG/M
3300025300	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s6 (SPAdes)	Environmental	Open in IMG/M
3300025301	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_908 (SPAdes)	Environmental	Open in IMG/M
3300025305	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05 (SPAdes)	Environmental	Open in IMG/M
3300025873	Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)	Environmental	Open in IMG/M
3300026115	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3827_250 (SPAdes)	Environmental	Open in IMG/M
3300028018	Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 1600m	Environmental	Open in IMG/M
3300028022	Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 750m	Environmental	Open in IMG/M
3300032278	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MG	Environmental	Open in IMG/M
3300032360	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 34915	Environmental	Open in IMG/M
3300032820	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MG	Environmental	Open in IMG/M
3300034654	Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 487_2244	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24520J20079_10084171	3300001735	Marine	MGKTRLKAQIVQPEDVARIWGDVAPLLEKVKEHTEGEFETDDYLE
KVRMV2_1016958461	3300002231	Marine Sediment	MDISRLKAQIVQPEDIAYIWEEVAPILERTKEHSEGELETDDFLEPLT
JGI25129J35166_10528473	3300002484	Marine	MGKTGLKAQIVQPEDVAYIWEEVAPLLERVKEHSEGELETDDFLEQ
JGI25131J35506_10013511	3300002511	Marine	MDISRLKAQIVQPEDIAYIWEEVSPLIEMARKHSEGELETDDFLE
JGI25131J35506_10082863	3300002511	Marine	MGKTRLKAQIVQPEDIAYIWDQVAPLLERVKEHSEGEAEPDDFLEPLTHGDMQL
Ga0066864_101736061	3300005520	Marine	LKAHIVQPEDIAYIWEQVAPLLERVKEHSEGELETDD
Ga0068481_11958231	3300006339	Marine	MDISRLKAQIVQPEDIAYIWDQVAPLLEKVKEHSEGEAEPDDFLEALTH
Ga0068481_13024073	3300006339	Marine	MDISRLKAQIVQPEDVAYIWEEVSPLIEMARKHSEGELETDDFL
Ga0098033_10667143	3300006736	Marine	MGKTLKAQIVQPEDVAYIWDEVAPLLERVKEHGEGEVEPDDFLEPLTHGDMQL
Ga0098033_10682481	3300006736	Marine	MGKTGLKAQIVQPEDIAYIWEEVSPLIEMARKHSEGELETDDFLEPLTHGDMQLW
Ga0098035_10032891	3300006738	Marine	VDISRLKAQIVQPEDIAYIWEQVAPLLERVKEHSEGEAEPDDFLEPLTHGD
Ga0098035_12112771	3300006738	Marine	LKAHIVQPEDIAYIWEQVAPLLERTKEHSEGELETDDFLEPLTHGDMQ
Ga0098035_13232461	3300006738	Marine	MGKTGLKAQIVQPEDIAYIWEQVAPLLERVKEHSEGEAEPDDFLEPLTHGD
Ga0098048_11636521	3300006752	Marine	MGKTGLRAQIVQPEDIAYIWDDVAPLLERAKEHSEGELETDDFLEQLTHGDMQ
Ga0098039_10288821	3300006753	Marine	MGKTGLKAQIVQPEDIAYIWEEVAPLLERVKEHSEGEAEPDDFLEPLTHGDMQL
Ga0098039_12290451	3300006753	Marine	MDISRLKAQIVQPEDIAYIWEEVSPLIEMARKHSEDELETDDFLEPLTH
Ga0098039_12351881	3300006753	Marine	LKAHIVQPEDIAYIWDQVAPLLERTKEHSEGELETDDFL
Ga0098044_11212251	3300006754	Marine	VKAHIVQPEDIAYIWEQVAPLLDRVKEHSEGELETDDFLEPLTH
Ga0098044_12213551	3300006754	Marine	VKAQIVAPEDIAYIWEEVAPLLDEVQEHTEGEVESDDFLEPLTHGDMQLW
Ga0098054_12010393	3300006789	Marine	MGKTLKAQIVQPEDIAYIWEEVAPLLERVKEHSEGEAEPDDFLE
Ga0098057_11882392	3300006926	Marine	LKAHIVQPEDIAYIWEEVAPLLERVKEHSEGEAEPDDFLEPLT
Ga0105664_12351543	3300007756	Background Seawater	VKAQIVAPEDVAYVWEEVAPLLDKVQEHTEGEVESDDFLEPLTHGDMQLWI
Ga0110931_12328063	3300007963	Marine	MDISRLKAQIVQPEDIAYIWEEVAPLLERVKEHSEGEAEPDDFLEPLTHGDMQ
Ga0098052_11903783	3300008050	Marine	VKAQIVAPEDIAYIWEEVAPLLDKVQEHTEGEVESDDFLEPLTHGDMQLW
Ga0114898_10566841	3300008216	Deep Ocean	MGKARLKAQIVQPEDVAHIWEEVAPLLERVKEHTEGEFETDDYLEPL
Ga0114898_12005853	3300008216	Deep Ocean	MDISRLKAHIVQPEDIAYIWEEVAPLLDKVKEHSEGELETDDFLEPLT
Ga0114899_10284111	3300008217	Deep Ocean	LKAQIVQPEDIPYIWDQVAPLLDRVREHTEGELETDDYLGELSDGNMQLW
Ga0114899_11473191	3300008217	Deep Ocean	LKAHIVQPEDIAYIWEEVAPLLDRVKEHSEGELETDDFIEP
Ga0114905_11574511	3300008219	Deep Ocean	LKAHIVQPEDVAYIWEEVAPLLDRVKEHSEGELETDDF
Ga0114910_12260001	3300008220	Deep Ocean	MDISRLKAQIVQPEDIPYIWDQVAPLLDRVREHTEGELETDDYLEELADGNMQ
Ga0114902_10375583	3300009413	Deep Ocean	LKAQIVQPEDIPYIWDQVAPLLDRVREHTEGELETDDYLEELA
Ga0114908_11454291	3300009418	Deep Ocean	LKAHIVQPEDIAYIWEEVAPLLDRVKEHSEGELETDDF
Ga0114908_12017301	3300009418	Deep Ocean	LKAHIVQPEDIAYIWDQVAPLLERVKEHSEGELETDD
Ga0114932_104899681	3300009481	Deep Subsurface	LKAHIVQPEDIAYIWEQVAPLLERTKEHSEGELETDDF
Ga0114900_10181813	3300009602	Deep Ocean	LKAHIVQPEDIAYIWEEVAPLLERVKEHSEGELETDDFLEPLTHGNMQLWIA
Ga0114911_10241331	3300009603	Deep Ocean	MDISRLKAQIVQPEDIPYIWDQVAPLLDRVREHTEGE
Ga0114901_11884121	3300009604	Deep Ocean	LKAHIVQPEDIAYIWDQVAPLLERVKEHSEGELETDDFLEPLTHGDMQLW
Ga0114901_12209252	3300009604	Deep Ocean	LKAHIVQPEDIAYIWEEVAPLLERVKEHSEGELETDDFL
Ga0114901_12385373	3300009604	Deep Ocean	LKAQIVQPEDIAYIWEEVAPLLHTVREHTEGELETDDFLE
Ga0114906_11696393	3300009605	Deep Ocean	LKAQIVQPEDIAYIWEEVAPLLDRVKEHSEGELETDDFLEP
Ga0114912_11083072	3300009620	Deep Ocean	LKAHIVQPEDVAYIWEEVAPLLERVKEHTEGEFETDDYLEPLTNGNMHLWIATE
Ga0105173_11016423	3300009622	Marine Oceanic	VKAHIVQPEDIAYIWEQVAPLLERTKEHSEGELETDDFLEPLTHGDMQLW
Ga0098061_12273081	3300010151	Marine	MGKTGLKAQIVQPEDIAYIWEEVAPLLERVKEHSEGEAEP
Ga0098059_11523593	3300010153	Marine	MGKTGLKAQIVQPEDIAYIWDDVAPLLERAKEHSEGELETDDFLEQLTHGDMQLWI
Ga0098059_12848452	3300010153	Marine	MKAQIVQPEDVAYIWEQVAPLLDKVKEHSEGEAEPDDFLEPLTHGDMQLWIFTEEG
Ga0098047_100026301	3300010155	Marine	LKAQIVQPEDIAYIWEQVAPLLERVKEHSEGEAEPDDFLEPLTHG
Ga0098047_100415251	3300010155	Marine	MGKTGLKAHIVQPEDIAYIWEQVAPLLERVKEHSEGEAEPDDFLEPLTHG
Ga0098047_103632221	3300010155	Marine	MGKTRLKAQIVQPEDVAYIWEQVAPLLERVKEHSEGELETDDF
Ga0181374_10110333	3300017702	Marine	MGKTGLKAQIVQPEDIAYIWEQVAPLLERTKEHSEGEFETDDFLEPLTHGD
Ga0181367_10343471	3300017703	Marine	LKAQIVQPEDIAYIWEQVAPLLDRVKEHSEGELETDDFLEPLTHGDMQL
Ga0181375_10132443	3300017718	Marine	LKAHIVQPEDIAYIWEQVAPLLERVKEHSEGELETDDFLEPLTHGDMQL
Ga0181375_10139613	3300017718	Marine	MGKTGLKAQIVQPEDIAYIWEQVAPLLERVKEHSEGEAE
Ga0181420_11591641	3300017757	Seawater	LKAHIVQPEDIAYIWEEVAPLLERTKEHSEGELETDDFLEPLTHGDMQLWIAT
Ga0181432_11042523	3300017775	Seawater	MGKARLKAQIVQPEDVAYIWEQVAPLLERVKEHSEGEFEADDYLESLTHGDMQLWIAT
Ga0181432_12270213	3300017775	Seawater	MGKTRLKAQIVQPEDVAYIWEEVSPLIETARKHSEGELET
Ga0211573_11469502	3300020327	Marine	LKAHIVQPEDIAYIWEQVAPLLERTKEHSEGELETDDFLEP
Ga0211637_102483451	3300020398	Marine	LKAHIVQPEDIAYIWEQVAPLLERVKEHSEGELETDDFLEPLTH
Ga0206685_101135571	3300021442	Seawater	MDISRLKAQIVQPEDVAYIWDEVAPLLERVKEHGEGEVEPDDFLEPLTHGDMQL
Ga0196903_10248921	3300022169	Aqueous	MKATIVEPEDVPYIWDNVAPLLSKVIQHSEGELETDDYLSNLMSGS
Ga0207901_10386703	3300025045	Marine	MGKTRLKAQIVQPEDIAHIWEAVAPLLERVKEHTEGEFDTDDYLEP
Ga0207902_10165901	3300025046	Marine	MGKTGLKAQIVQPEDISYIWDQVAPLLERVKEHSEGEAEPDDFLEALTH
Ga0207902_10278331	3300025046	Marine	MGVSRLKAQIVQPEDVAYIWEEVSPLIEMARKHSEGELETDD
Ga0207892_10392691	3300025050	Marine	MGKTLKAQIVQPEDVAYIWEEVAPLLERTKEHSEGEFE
Ga0207906_10250143	3300025052	Marine	MGKTGLKAQIVQPEDIAYIWDKVAPLLERVKEHSEGEAEPDDFLEALTH
Ga0207887_10349502	3300025069	Marine	LKAHIVQPEDVAYIWEEVAPLLEKVKEHSEGELETD
Ga0208010_100247210	3300025097	Marine	VDISRLKAQIVQPEDIAYIWEQVAPLLERVKEHSEGEAEPDDFLEP
Ga0208793_11837253	3300025108	Marine	MGKTGLKAQIVQPEDVAYIWDDVAPLLERAREHSE
Ga0208553_10900761	3300025109	Marine	MGKTLKAQIVQPEDVAYIWDQVAPLLERTKEHSEGELETDDFLEPLTHGDMQLW
Ga0208553_11380932	3300025109	Marine	LKAHIVQPEDIPYIWEQVAPLLDRVREHTEGELETDD
Ga0208553_11475351	3300025109	Marine	VKAQIVAPEDIAYVWEEVAPLLDKVQEHTEGEVESD
Ga0209349_10432521	3300025112	Marine	MGKTGLKAHIVQPEDVAYIWEEVAPLLERVKEHSEGELETDDFLEPLTH
Ga0208790_10142025	3300025118	Marine	VDISRLKAQIVQPEDIAYIWEQVAPLLDRVKEHSE
Ga0209434_11032141	3300025122	Marine	MGKTGLKAQIVQPEDVAYIWDDVAPLLERAREHSEGELEADDFLEQLTHGDMQ
Ga0209644_10389213	3300025125	Marine	MGKTRLKAQIVQPEDVARIWEDVAPLLEKVKEHTEG
Ga0209644_11804151	3300025125	Marine	VKAQIVAPEDIAYIWEEVAPLLDKVQEHTEGEVESEDFLEPLTQGDMQ
Ga0207893_10369602	3300025241	Deep Ocean	LKAQIVQPEDIAYIWDQVAPLLEKTKEHSEGELETDDFLEPLTHGDMQLWIA
Ga0207904_10768631	3300025248	Deep Ocean	LKAQIVQPEDIAYIWEKVAPLLDKVKEHSEGELETDDFLEPLTHGDMQLW
Ga0208029_10912162	3300025264	Deep Ocean	LKAHIVQPEDIAYIWEEVAPLLDKVKEHTEGELETDDFLEPLTHGDMQL
Ga0208813_10496903	3300025270	Deep Ocean	MGKTLKAQIVQPEDIAYIWEEVAPLLERVKEHSEGELETDDFLEPLT
Ga0208813_10662781	3300025270	Deep Ocean	MDISRLKAQIVQPEDVAYIWDQVAPLLEKVKEHSEGEAEPDDFLEALTHGDMQLW
Ga0208813_10844233	3300025270	Deep Ocean	VKAHIVQPEDIAYIWEEVAPLLDRVKEHSEGELETDDFLE
Ga0208183_10329243	3300025274	Deep Ocean	MKAHIVQPEDVAYIWEEVAPLLDRVKEHSEGELETDDFLEPLTHGDMQLW
Ga0208180_10848831	3300025277	Deep Ocean	LKAQIVQPEDVAYIWDEVAPLLERVKEHGEGEVEPDD
Ga0208449_10565873	3300025280	Deep Ocean	MGKTLKAQIVQPEDIAYIWEEVAPLLDRVKEHSEGELETDDFLEPLTHGDMQLWIA
Ga0208449_11192382	3300025280	Deep Ocean	LKAHIVQPEDIAYIWDQVAPLLERVKEHSEGEAEPD
Ga0208934_10380713	3300025293	Deep Ocean	MKAHIVQPEDVAYIWEEVAPLLDRVKEHSEGELETDDFLE
Ga0208934_10442301	3300025293	Deep Ocean	LKAHIVQPEDIAYIWEEVAPLLERVKEHSEGELETDDFLE
Ga0208316_10958651	3300025296	Deep Ocean	MDISRLKAQIVQPEDIPYIWDQVAPLLDRVREHTEGELETDDYLEELADGNMQLWV
Ga0208316_11040271	3300025296	Deep Ocean	MGKTLKAQIVQPEDIAYIWEEVAPLLDRVKEHSEGELETDDFLEPLT
Ga0208181_10164061	3300025300	Deep Ocean	MDISRLKAQIVQPEDVAYIWDKVAPLLERVKEHSEGEAEPD
Ga0208181_10800551	3300025300	Deep Ocean	MDISRLKAQIVQPEDVAYIWDQVAPLLDRVKEHSEGEAEPDDFLEALT
Ga0208450_10822563	3300025301	Deep Ocean	MGKTLKAQIVQPEDIAYIWEEVAPLLDRVKEHSEGELETDDFLEPLTHGDMQLW
Ga0208450_11048271	3300025301	Deep Ocean	LKAHIVQPEDVAYIWEEVAPLLERVKEHTEGEFETDDYLEPLT
Ga0208684_11121192	3300025305	Deep Ocean	LKAHIVQPEDVAYIWEEVAPLLDRVKEHSEGELETDDFLEPLTHGDMQLWIAT
Ga0209757_100335213	3300025873	Marine	MDISRLKAQIVQPEDIAYIWEEVSPLIEMARKHSEGELAHP
Ga0208560_10256013	3300026115	Marine Oceanic	MGKTLKAQIVQPEDVAYIWEEVAPLLEKVKEHTEGEFETDD
Ga0256381_10386121	3300028018	Seawater	MKAHIVQPEDIAYIWEEVAPLLDRVKEHSEGELETDDFLEPLTHGDMQLWIATEDL
Ga0256382_11820692	3300028022	Seawater	MGKARLKAQIVQPEDIAYIWEKVAPLIERAKEHSEGELETDDFLEPLTHG
Ga0310345_118525273	3300032278	Seawater	VKAQIVAPEDIAYIWEEVAPLLDKVQEHTEGEVESDDFLEPLTHGDMQL
Ga0315334_114178023	3300032360	Seawater	MDISRLKAQIVQPEDVAYIWDEVAPLLERVKEHSEGEAEPDDF
Ga0310342_1033660581	3300032820	Seawater	MGKTLKAQIVQPEDVAYIWEEVAPLLDKVKEHTEGEL
Ga0326741_004656_1233_1349	3300034654	Filtered Seawater	MDISRLKAQIVQPEDVAHIWDQVAPLLEKVKEHTEGEF

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F101295

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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