Basic Information | |
---|---|
Family ID | F101294 |
Family Type | Metagenome |
Number of Sequences | 102 |
Average Sequence Length | 52 residues |
Representative Sequence | MSRRKGRTNVRLGILDEINQIDKRIKRFKNDEEKVTTLTSKRKVLTNKLKTKR |
Number of Associated Samples | 57 |
Number of Associated Scaffolds | 102 |
Quality Assessment | |
---|---|
Transcriptomic Evidence | No |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 3.00 % |
% of genes near scaffold ends (potentially truncated) | 21.57 % |
% of genes from short scaffolds (< 2000 bps) | 93.14 % |
Associated GOLD sequencing projects | 45 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.62 |
Hidden Markov Model |
---|
|
Powered by Skylign |
Most Common Taxonomy | |
---|---|
Group | Unclassified (81.373 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
---|---|
GOLD Ecosystem | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (81.373 % of family members) |
Environment Ontology (ENVO) | Unclassified (97.059 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (95.098 % of family members) |
⦗Top⦘ |
Full Alignment |
---|
Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66. |
Powered by MSAViewer |
⦗Top⦘ |
Predicted Topology & Secondary Structure | |||||
---|---|---|---|---|---|
Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 54.32% β-sheet: 0.00% Coil/Unstructured: 45.68% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
|||||
Powered by Feature Viewer |
Structure Viewer | |
---|---|
| |
Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.62 |
Powered by PDBe Molstar |
⦗Top⦘ |
⦗Top⦘ |
Visualization |
---|
All Organisms Unclassified |
Powered by ApexCharts |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
⦗Top⦘ |
Visualization |
---|
Marine Deep Ocean Marine Seawater Marine Sediment Aqueous Estuarine Freshwater And Marine Seawater |
Powered by ApexCharts |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Geographical Distribution | |
---|---|
|
|
Zoom: | Powered by OpenStreetMap |
⦗Top⦘ |
Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
NpDRAFT_103251292 | 3300000929 | Freshwater And Marine | RMRRRKGKTNVRLAALDEINQIDKRLKRFKNDEEKVTALMSKRNNLRSKLKTKR* |
JGI25134J35505_100970054 | 3300002518 | Marine | MSKRKERTNXXLGXLDEINQIDKRIKRFKNDEEKVTTLTSKRKVLTSKLK |
JGI25134J35505_101373682 | 3300002518 | Marine | MSRRKERTNIKLGILDEINQIDKRIKRFKNDEEKVTTLTSKRKVLTSKLKTKR* |
Ga0066854_101447183 | 3300005431 | Marine | MSKKKGKTNLRLATLDEINQIDKRLKRFKNDEEKVTALMSKRNNLRSKLKTKR* |
Ga0078746_10366702 | 3300005821 | Marine Sediment | MSKKKGKTNLRLATLDEINQIDKRLKRFKNDEEKVTALMSKRNNLRNKLKTNK* |
Ga0068503_104513903 | 3300006340 | Marine | MSGRKGKTNIRLAVLDEINQIDRRLKKSKIRNNEEETSKLMSKRNTLRNKLKTNK* |
Ga0098033_11177864 | 3300006736 | Marine | MSRRKGRTNIKLGILDEINQIDKRLKKFNGRGRLNEEADKLISKRKVLTSKLKTKR* |
Ga0098033_11698673 | 3300006736 | Marine | EKTNIKLGILNEINYIDRRLKKFNGKGRLNEEADKLISKRKILTNKLKTKR* |
Ga0098033_12167111 | 3300006736 | Marine | TNVRLGILDEINQIDKRIKRFKNDEEKVTTLTSKRKVLTNKLKTKR* |
Ga0098035_10413595 | 3300006738 | Marine | MSKRKERTNVRLGILDEINQIDKRIKRFKNDEEKVTTLTSKRKTLTNKLKTKR* |
Ga0098058_11002551 | 3300006750 | Marine | MSKKKGKTNLRLAALDEINQIDKRLKRFKNNEEKVTALISKRNNLRSKLKTNK* |
Ga0098058_11601983 | 3300006750 | Marine | MSKRKERTNVRLGILDEINQIDKRIKRFKNDEEKVITLTSKRKVLTNKLKTKR* |
Ga0098058_11778742 | 3300006750 | Marine | MSRRKGRTNIKLGILDEINQIDKRLKKFNGRGRLNEEADNLISKRKVLTNKLKTKR* |
Ga0098040_11112211 | 3300006751 | Marine | GRTNVRLGILDEINQIDKRIKRFKNDEEKVTTLTSKRKVLTNKLKTKR* |
Ga0098040_11384402 | 3300006751 | Marine | MSKRKERTNIKLGILDEINQIDKRLKRFKNNEEKVTTLTSKRKVLTNKLKTKR* |
Ga0098040_11435403 | 3300006751 | Marine | MSRRKGRTNIKLGILDEINQIDKRIKRFKNDEEKVTTLTSKRKILTNKLKTKR* |
Ga0098040_11715311 | 3300006751 | Marine | RRKGRTNVRLGILDEINQIDKRIKRFKNDEEKVTALTSKRKVLTNKLKTKR* |
Ga0098040_11752892 | 3300006751 | Marine | MSKKKGKTNLRLATLDEINQIDKRLKRFKNNEEKVTALISKRNNLRNKLKTNK* |
Ga0098040_12434703 | 3300006751 | Marine | MSKKKGKTNLRLAALDEINQIDKRLKRFKNDEEKVTALMSKRNNLRNKLKTNK* |
Ga0098048_12473843 | 3300006752 | Marine | MSKRKERTNIKLGILDEINQIDKRIKRFKNDEEKVTTLTSKRKILTNKLKTKR* |
Ga0098039_11263913 | 3300006753 | Marine | MSKKKGKTNARLAVLNEINHTDKRLKRFKNNEEETAKLMSRRNLLRSKLKTK* |
Ga0098044_10830265 | 3300006754 | Marine | MSKKKGKTNLRLAALDEINQIDKRLKRFKNDEEKVTTLMSKRNNLRNKLKTNK* |
Ga0098044_11043974 | 3300006754 | Marine | MSRRKGRTNIKLGILDEINQIDKRIKRFKNDEEKVTTLTSKRKVLTSKLKTKR* |
Ga0098044_12758591 | 3300006754 | Marine | MSRRKGRTNVRLGILDEINQIDKRIKRFKNDEEKVTTLTSKRKILTNKLKTKR* |
Ga0098044_12806792 | 3300006754 | Marine | MSKKKGKTNLRLAALDEINQIDKRLKRFKNDEEKVTTLMSKRNNLRSKLKTKR* |
Ga0098044_13878211 | 3300006754 | Marine | MSRRKGRTNVRLGILDEINQIDKRIKRFKNDEEKVTALTSKRKVLTNKLKTKR* |
Ga0098054_10553225 | 3300006789 | Marine | MSKKKGKTNLRLAALDEINQIDKRLKRFKNDEEKVAALMSKRNNLRNKLKTNK* |
Ga0098054_12033702 | 3300006789 | Marine | MSKKKGKTNLRLAALDEINQIDKRLKRFKNNEEKVTALMSKRNNLRNKLKTNK* |
Ga0098054_12991763 | 3300006789 | Marine | MSKRKGNTNRKLEALNEINKIDKKLKKFNGKGILNEEADKLISKRDSLRARLKTKR* |
Ga0098055_11145124 | 3300006793 | Marine | MSRRKGKTNIRLATLDEINQIDKRLKRFKNDEEKVTALISKRNNLRNKLKTNK* |
Ga0098055_11258642 | 3300006793 | Marine | MSKRKGRTNIRLEMLNEINQIDKRLKRFKNNEEKVTTLTSRRNTLRSKLK* |
Ga0098055_11658632 | 3300006793 | Marine | MSRRKGRTNVRLGILDEINQIDKRIKRFKNDEEKVITLTSKRKVLTNKLKTKR* |
Ga0098055_12309702 | 3300006793 | Marine | MSKRKERTNVRLGILDEINQIDKRIKRFKNDEEKVTTLTSKRKVLTSKLKTKR* |
Ga0098055_12825593 | 3300006793 | Marine | MSRRKGKTNVRLAALDEINQIDKRLKRFKNDEEKVTALMSKRNNLRNKLKTNK* |
Ga0098060_10172952 | 3300006921 | Marine | MSRRKGKTNIRLAALDEINQIDKRLKRFKNDEEKVTSLISKRNNLRNKLKTNK* |
Ga0098060_10446335 | 3300006921 | Marine | MSRRKGRTNVRLAALDEINQIDKRLKRFKNDEEKVAALTSKRNNLRNKLKTNK* |
Ga0098057_11824951 | 3300006926 | Marine | KVKTNIRLSLLNEINQTDKRLKRFKNDEEKVTTLISKRNTLRNKLKTKR* |
Ga0098034_10347295 | 3300006927 | Marine | MSRRKERTNIKLGILDEINQIDKRIKRFKNDEEKVTTLTSKRKTLTNKLKTKR* |
Ga0098034_11007965 | 3300006927 | Marine | MSRRKGRTNIKLGILDEINQIDKRIKRFKNDEEKVTTLTSKRKVLTNKLK |
Ga0098034_11386622 | 3300006927 | Marine | MSKRKERTNIKLGILDEINQIDKRIKRFKNDEEKVTTLTSKRKVLTSKLKTKR* |
Ga0098034_11807004 | 3300006927 | Marine | MSKKKGKTNLRLAALDEINQIDKRLKRFKNNEEKVTALISKRNN |
Ga0098036_12607353 | 3300006929 | Marine | MSRRKGKTNIRLAALDEINQIDKRLKRFKNDEEKVTSLISKRNNLRNKLK |
Ga0098046_10653835 | 3300006990 | Marine | MSKKKGKTNLRLAALDEINQIDKRLKRFKNDEEKVTALMSKRNNLRNKLK |
Ga0098046_10841042 | 3300006990 | Marine | MSRRKGKTNIRLATLDEINQIDKRLKRFKNDEEKVAALTSKRNNLRNKLKTNK* |
Ga0070747_11912693 | 3300007276 | Aqueous | MSRRKGKTNVRLAALDEINQIDKRLKRFKNDEEKVTALMSKRNNLRNKLKTN |
Ga0098052_10887721 | 3300008050 | Marine | MSKKKEKTNRKLEMLNEINLIDKRLKRFKNDEEKITSLTSRRNTLRNQLKTNK* |
Ga0098052_11959462 | 3300008050 | Marine | MSRRKGRTNVRLGILDEINQIDKRIKRFKNDEEKVTTLTSKRKVLTSKLKTKR* |
Ga0098052_12404123 | 3300008050 | Marine | MSKRKERTNVKLGILDEINQIDKRIKRFKNDEEKVTTLTSKRKVL |
Ga0098052_13965381 | 3300008050 | Marine | KTNKKLRILNEINYIDIRLKKFNGKGRLNEEADKLISKRKTLTNKLKTKK* |
Ga0114910_11136071 | 3300008220 | Deep Ocean | MSRRKGRTNIKLGILDEINQIDKRLKRFKNDEEKVTTLTSKRKTLTNKLKTKR* |
Ga0102887_11346591 | 3300008961 | Estuarine | MSRRKGKTNVRLAALDEINQIDKRLKRFKNDEEKVTALMSKRNNLRSKLKTKR* |
Ga0102886_11913532 | 3300009052 | Estuarine | MSRRKGKTNIRLAALDEINQIDKRLKRFKNDEEKVTALMSKRNNLRSKLKTKR* |
Ga0098049_11676672 | 3300010149 | Marine | MSRRKGRTNVRLGILDEINQIDKRIKRFKNDEEKVTTLTSKRKVLTNKLKTKR* |
Ga0098049_11971051 | 3300010149 | Marine | MSRRKGRTNIKLGILDEINQIDKRIKRFKNNEEKVITLTSKRKLLTNKLKTKK* |
Ga0098056_10884702 | 3300010150 | Marine | MSKRKERTNVRLGILDEINQIDKRIKRFKNDEEKVTTLTSKRKVLTNKLKSKR* |
Ga0098056_11052443 | 3300010150 | Marine | MSKKKGKTNLRLAALDEINQIDKRLKRFKHDEEKVTTLMSKRNNLRSKLKTKR* |
Ga0098061_11659373 | 3300010151 | Marine | MSRRKERTNIKLGILDEINQIDKRIKRFKNDEEKVTTLTSKRKVLTNKLKTKR* |
Ga0098059_10334872 | 3300010153 | Marine | MSKKKEKTNRKLEILNEINLIDKRLKRFKNDEEKITSLTSRRNTLRNQLKTNK* |
Ga0098059_11033793 | 3300010153 | Marine | MSKRKERTNIKLGILDEINQIDKRLKRFKNNEEKVTTLTSKRNTLRNKLKTKR* |
Ga0098059_13269351 | 3300010153 | Marine | MSRRKGRTNVRLGILDEINQIDKRIKRFKNDEEKVTALTSKRKTLTNKLKTKR* |
Ga0098059_13344431 | 3300010153 | Marine | MSKKKGKTNLRLAALDEINQIDKRLKRFKNDEEKVATLISKRKTLTNKLKTKR* |
Ga0098047_101859692 | 3300010155 | Marine | MSRRKGRTNIKLGILDEINQIDKRIKRFKNDEEKVTTLTSKRKVLTNKLKTKR* |
Ga0098047_102152241 | 3300010155 | Marine | VRLGILDEINQIDKRIKRFKNDEEKVTTLTSKRKVLTNKLKTKR* |
Ga0098047_103922023 | 3300010155 | Marine | RTNIKLGILDEINQIDKRIKRFKNNEEKVTALVSKRNNLKNKLKTKR* |
Ga0181374_10201533 | 3300017702 | Marine | MSRRKGRTNIKLGILDEIHQIDKRLKKFNGRGRLNEEADKLISKRKVLTSKLKTKR |
Ga0181374_10453141 | 3300017702 | Marine | MSKKKGKTNLRLAMLDEINQIDKRLKRFKNDEEKVTALISKRNNLRNKLKTNK |
Ga0181372_10574532 | 3300017705 | Marine | MSKRKERTNVRLGILDEINQIDKRIKRFKNDEEKVTTLTSKRKVLTSKLKTKR |
Ga0181375_10788552 | 3300017718 | Marine | MSKKKGKTNLRLATLDEINQIDKRLKRFKNDEEKVTALISKRNNLRNKLKTNK |
Ga0181416_10618282 | 3300017731 | Seawater | MSRRKGKTNIKLGILDEINQIDKRLKRFKNDEEKVTTLTSKRKVLTNKLKTKR |
Ga0187220_11820843 | 3300017768 | Seawater | MSRRKGTTNIKLGILDEINQIDKRLKRFKNDEEKVTTLTSKRKVLTNKLKTKR |
Ga0181425_12091573 | 3300017771 | Seawater | MSRRKGKTNIRLAALDEINQIDKRLKRFKSDEEKVTALISKRNNLRNKLKTNK |
Ga0181432_10746124 | 3300017775 | Seawater | MSKKKERTNIKLGYLNEINYIDKRLKKFNGKGRLNEEADKLMSKRKVLTNKLKTKR |
Ga0181432_11945701 | 3300017775 | Seawater | TKMSRRKERTNIRLGILDEINQIDKRIKRFKNDEEKVTTLTSKRKVLTNKLKTKR |
Ga0181432_12775823 | 3300017775 | Seawater | MSRRKGRTNIKLGILDEINQIDKRIKRFKNNEEKVTTLTSKRKVLTSKLKTKK |
Ga0181395_10746244 | 3300017779 | Seawater | MSRRKGKTNIRLAALDEINQIDKRLKRFKNDEEKVTALISKRNNLRNKLKTNK |
(restricted) Ga0233429_10350739 | 3300022902 | Seawater | MSKKKGKTNLRLATLDEINQIDKRLKRFKNDEEKVTALISKRNNLRSKLKTKR |
(restricted) Ga0255048_100764172 | 3300024518 | Seawater | MSKKKGKTNIKLELLNELNSINKRLKRFKNDAEKCSSLISKRNNLRAKLKGS |
Ga0208012_10128993 | 3300025066 | Marine | MSKKKGKTNLRLATLDEINQIDKRLKRFKNDEEKVTALMSKRNNLRNKLKTNK |
Ga0208012_10644432 | 3300025066 | Marine | MSKRKERTNVKLGILDEINQIDKRIKRFKNDEEKVTTLTSKRKVLTSKLKTKR |
Ga0208920_10689813 | 3300025072 | Marine | MSKRKERTNVRLGILDEINQIDKRIKRFKNDEEKVTTLTSKRKTLTNKLKTKR |
Ga0208668_10114508 | 3300025078 | Marine | MSRRKGRTNVRLGILDEINQIDKRIKRFKNDEEKVTTLTSKRKVLTNKLKTKR |
Ga0208792_10940872 | 3300025085 | Marine | MSKRKERTNVRLGILDEINQIDKRIKRFKNDEEKVTTLTSKRKVLTNKLKTKR |
Ga0208011_10218811 | 3300025096 | Marine | MSKRKERTNVRLGILDEINQIDKRIKRFKNDEEKVTTLTSKRKVLTSKLKTKRXKNTIN |
Ga0208011_10672332 | 3300025096 | Marine | MSKRKERTNIKLGILDEINQIDKRIKRFKNDEEKVTTLTSKRKVLTSKLKTKR |
Ga0208011_11321582 | 3300025096 | Marine | MSKRKGRTNIKLGILNEINQIDKRLKKFNGRGRLNEEADNLISKRKVLTNKLKTKR |
Ga0208011_11335701 | 3300025096 | Marine | RRKGRTNVRLGILDEINQIDKRIKRFKNDEEKVTALTSKRKVLTNKLKTKR |
Ga0208010_10146204 | 3300025097 | Marine | MSKRKERTNVRLGILDEINQIDKRIKRFKNDEEKVITLTSKRKVLTNKLKTKR |
Ga0208010_10843311 | 3300025097 | Marine | KRKERTNVRLGILDEINQIDKRIKRFKNDEEKVTTLTSKRKTLTNKLKTKR |
Ga0208010_11010991 | 3300025097 | Marine | MSRRKERTNIKLGILDEINQIDKRIKRFKNDEEKVTTLTSKRKTLTNKLKTKRXVKVKNC |
Ga0208434_10463915 | 3300025098 | Marine | MSRRKGKTNIRLATLDEINQIDKRLKRFKNNEEKVAALMSKRNNLRNKLKTKR |
Ga0208669_10054636 | 3300025099 | Marine | MSRRKGKTNIRLAALDEINQIDKRLKRFKNDEEKVTSLISKRNNLRNKLKTNK |
Ga0208669_10070318 | 3300025099 | Marine | MSRRKGKTNIRLATLDEINQIDKRLKRFKNDEEKVTALISKRNNLRNKLKTNK |
Ga0208793_11120104 | 3300025108 | Marine | MSKKKGKTNLRLATLDEINQIDKRLKRFKNDEEKVAALMSKRNNLRNKLKTNK |
Ga0208553_11381252 | 3300025109 | Marine | VRLGILDEINQIDKRIKRFKNDEEKVTTLTSKRKVLTNKLKTKR |
Ga0209349_11416321 | 3300025112 | Marine | MSKRKGRTNIKLGILDKINQIDKRLKKFNGRGRLNEEADNLISKRKVLTSKLKTKK |
Ga0208433_11022932 | 3300025114 | Marine | MSKKKGKTNLRLATLDEINQIDKRLKRFKNDEEKVTTLMSKRNNLRSK |
Ga0208790_11608692 | 3300025118 | Marine | MSKKKGKTNLRLAALDEINQIDKRLKRFKNDEEKVTALMSKRNNLRNKLKTNK |
Ga0209434_11932431 | 3300025122 | Marine | MSKRKGRTNIKLGILDEINQIDKRIKRFKNDEEKVTTLTSKRKVLTSKLKTKR |
Ga0209128_10840333 | 3300025131 | Marine | MSRRKERTNIKLGILDEINQIDKRIKRFKNDEEKVTTLTSKRKVLTSKLKTKR |
Ga0208134_10892082 | 3300025652 | Aqueous | MSRRKGKTNVRLAALDEINQIDKRLKRFKNDEEKVTALMSKRNNLRNKLKTNK |
(restricted) Ga0233415_103155671 | 3300027861 | Seawater | MSRRKGRTNIKLGILDEINQIDKRLKRFKNDEEKVTTLISKRNN |
(restricted) Ga0233413_100757603 | 3300027996 | Seawater | MSKKKGKTNLRLATLDEINQIDKRLKRFKNDEEKVTALMSKRNNLRSKLKTKR |
⦗Top⦘ |