Metagenome / Metatranscriptome Family F101283

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F101283
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	71 residues
Representative Sequence	MTALHKTVERIAARVLGILRVITVPRVWAKEVAMAKVIEFYIPKNFRKSFKWVPELQRGKILEFCPQTKKSA
Number of Associated Samples	74
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	34.31 %
% of genes near scaffold ends (potentially truncated)	14.71 %
% of genes from short scaffolds (< 2000 bps)	82.35 %
Associated GOLD sequencing projects	66
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (87.255 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds (18.628 % of family members)
Environment Ontology (ENVO)	Unclassified (32.353 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (41.176 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.00% β-sheet: 0.00% Coil/Unstructured: 44.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.30
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.30
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF00158	Sigma54_activat	50.98
PF02954	HTH_8	7.84
PF00486	Trans_reg_C	2.94
PF00106	adh_short	0.98
PF06897	DUF1269	0.98
PF07992	Pyr_redox_2	0.98
PF08447	PAS_3	0.98
PF08768	THAP4_heme-bd	0.98
PF02922	CBM_48	0.98
PF04203	Sortase	0.98
PF02518	HATPase_c	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG3764	Sortase (surface protein transpeptidase)	Cell wall/membrane/envelope biogenesis [M]	0.98
COG4803	Uncharacterized membrane protein	Function unknown [S]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	87.25 %
Unclassified	root	N/A	12.75 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	87.25 %
Unclassified	root	N/A	12.75 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	87.25 %
Unclassified	root	N/A	12.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	62.75 %
Unclassified	root	N/A	12.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	29.41 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	14.71 %
Unclassified	root	N/A	12.75 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	3.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	29.41 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.71 %
Unclassified	root	N/A	12.75 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	3.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	29.41 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.71 %
Unclassified	root	N/A	12.75 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	3.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.71 %
Unclassified	root	N/A	12.75 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	8.82 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	3.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.71 %
Unclassified	root	N/A	12.75 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	4.90 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	3.92 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	3.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10752155	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300004080\|Ga0062385_10030586	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2150	Open in IMG/M
3300004091\|Ga0062387_100142982	Not Available	1365	Open in IMG/M
3300005434\|Ga0070709_10530517	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	898	Open in IMG/M
3300005439\|Ga0070711_101149163	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	670	Open in IMG/M
3300005537\|Ga0070730_10433584	All Organisms → cellular organisms → Bacteria → Acidobacteria	848	Open in IMG/M
3300005542\|Ga0070732_10135814	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1461	Open in IMG/M
3300005542\|Ga0070732_10527943	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300005542\|Ga0070732_10647042	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	643	Open in IMG/M
3300006041\|Ga0075023_100206708	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	761	Open in IMG/M
3300006050\|Ga0075028_100373764	All Organisms → cellular organisms → Bacteria → Acidobacteria	810	Open in IMG/M
3300006050\|Ga0075028_100586016	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	660	Open in IMG/M
3300006052\|Ga0075029_100165360	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1367	Open in IMG/M
3300006052\|Ga0075029_101216208	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300006059\|Ga0075017_101186537	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	597	Open in IMG/M
3300006162\|Ga0075030_100027610	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4853	Open in IMG/M
3300006162\|Ga0075030_100319296	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	1241	Open in IMG/M
3300006162\|Ga0075030_100697367	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	803	Open in IMG/M
3300006162\|Ga0075030_101485421	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300006354\|Ga0075021_10570556	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	721	Open in IMG/M
3300009088\|Ga0099830_10174706	All Organisms → cellular organisms → Bacteria → Acidobacteria	1667	Open in IMG/M
3300009089\|Ga0099828_10280159	All Organisms → cellular organisms → Bacteria	1498	Open in IMG/M
3300009698\|Ga0116216_10533338	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300010048\|Ga0126373_10334245	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1522	Open in IMG/M
3300010366\|Ga0126379_10441269	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1361	Open in IMG/M
3300010366\|Ga0126379_11021609	All Organisms → cellular organisms → Bacteria	932	Open in IMG/M
3300010379\|Ga0136449_100018671	All Organisms → cellular organisms → Bacteria	17939	Open in IMG/M
3300011269\|Ga0137392_10682166	Not Available	851	Open in IMG/M
3300011270\|Ga0137391_10684044	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	854	Open in IMG/M
3300012210\|Ga0137378_10289566	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1523	Open in IMG/M
3300012349\|Ga0137387_11241674	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300012363\|Ga0137390_10129746	All Organisms → cellular organisms → Bacteria → Acidobacteria	2499	Open in IMG/M
3300012685\|Ga0137397_10538133	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300015373\|Ga0132257_100891362	All Organisms → cellular organisms → Bacteria → Acidobacteria	1114	Open in IMG/M
3300015374\|Ga0132255_100788303	All Organisms → cellular organisms → Bacteria	1416	Open in IMG/M
3300015374\|Ga0132255_100882390	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1336	Open in IMG/M
3300017823\|Ga0187818_10065268	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1568	Open in IMG/M
3300017927\|Ga0187824_10087258	All Organisms → cellular organisms → Bacteria → Acidobacteria	994	Open in IMG/M
3300017930\|Ga0187825_10072398	Not Available	1178	Open in IMG/M
3300017930\|Ga0187825_10222874	All Organisms → cellular organisms → Bacteria → Acidobacteria	684	Open in IMG/M
3300017936\|Ga0187821_10043009	Not Available	1609	Open in IMG/M
3300017943\|Ga0187819_10685702	Not Available	578	Open in IMG/M
3300017975\|Ga0187782_10385485	All Organisms → cellular organisms → Bacteria	1064	Open in IMG/M
3300017993\|Ga0187823_10201166	All Organisms → cellular organisms → Bacteria → Acidobacteria	654	Open in IMG/M
3300017995\|Ga0187816_10557199	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300018006\|Ga0187804_10177373	All Organisms → cellular organisms → Bacteria	905	Open in IMG/M
3300018062\|Ga0187784_10754747	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300020579\|Ga0210407_10002024	All Organisms → cellular organisms → Bacteria → Acidobacteria	17946	Open in IMG/M
3300020579\|Ga0210407_11216053	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300020579\|Ga0210407_11401208	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300020580\|Ga0210403_10056403	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3144	Open in IMG/M
3300020580\|Ga0210403_11261792	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300020581\|Ga0210399_10132061	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2056	Open in IMG/M
3300020581\|Ga0210399_10310000	Not Available	1317	Open in IMG/M
3300020581\|Ga0210399_10876591	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	729	Open in IMG/M
3300021046\|Ga0215015_10313800	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	700	Open in IMG/M
3300021171\|Ga0210405_10005572	All Organisms → cellular organisms → Bacteria	11424	Open in IMG/M
3300021180\|Ga0210396_10522799	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1037	Open in IMG/M
3300021405\|Ga0210387_10738275	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	872	Open in IMG/M
3300021432\|Ga0210384_10787164	All Organisms → cellular organisms → Bacteria	848	Open in IMG/M
3300021478\|Ga0210402_10260808	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1601	Open in IMG/M
3300021478\|Ga0210402_10454299	All Organisms → cellular organisms → Bacteria	1190	Open in IMG/M
3300021559\|Ga0210409_10167251	All Organisms → cellular organisms → Bacteria → Acidobacteria	2011	Open in IMG/M
3300021560\|Ga0126371_11102762	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	933	Open in IMG/M
3300021560\|Ga0126371_13297178	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300022507\|Ga0222729_1002100	All Organisms → cellular organisms → Bacteria	1611	Open in IMG/M
3300022717\|Ga0242661_1098722	Not Available	608	Open in IMG/M
3300027109\|Ga0208603_1006799	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1896	Open in IMG/M
3300027645\|Ga0209117_1012979	All Organisms → cellular organisms → Bacteria → Acidobacteria	2780	Open in IMG/M
3300027645\|Ga0209117_1028128	Not Available	1771	Open in IMG/M
3300027698\|Ga0209446_1036943	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1228	Open in IMG/M
3300027783\|Ga0209448_10112009	All Organisms → cellular organisms → Bacteria	914	Open in IMG/M
3300027842\|Ga0209580_10092348	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1457	Open in IMG/M
3300027862\|Ga0209701_10142167	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1470	Open in IMG/M
3300027889\|Ga0209380_10532638	Not Available	684	Open in IMG/M
3300027894\|Ga0209068_10392787	All Organisms → cellular organisms → Bacteria → Acidobacteria	790	Open in IMG/M
3300027910\|Ga0209583_10189805	All Organisms → cellular organisms → Bacteria → Acidobacteria	869	Open in IMG/M
3300027911\|Ga0209698_10033318	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4688	Open in IMG/M
3300027911\|Ga0209698_10135362	All Organisms → cellular organisms → Bacteria	2031	Open in IMG/M
3300027911\|Ga0209698_10142177	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1974	Open in IMG/M
3300027911\|Ga0209698_10292026	All Organisms → cellular organisms → Bacteria	1293	Open in IMG/M
3300027911\|Ga0209698_10635095	All Organisms → cellular organisms → Bacteria	818	Open in IMG/M
3300027915\|Ga0209069_10102037	Not Available	1387	Open in IMG/M
3300030848\|Ga0075388_11110421	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300031057\|Ga0170834_107254787	Not Available	1758	Open in IMG/M
3300031057\|Ga0170834_109291082	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300031057\|Ga0170834_110965044	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300031128\|Ga0170823_11999822	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	728	Open in IMG/M
3300031231\|Ga0170824_114853828	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	603	Open in IMG/M
3300031474\|Ga0170818_105813212	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	633	Open in IMG/M
3300031708\|Ga0310686_101054224	All Organisms → cellular organisms → Bacteria	6583	Open in IMG/M
3300031753\|Ga0307477_10287937	All Organisms → cellular organisms → Bacteria	1135	Open in IMG/M
3300031754\|Ga0307475_10101700	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2244	Open in IMG/M
3300031754\|Ga0307475_10127580	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	2008	Open in IMG/M
3300031820\|Ga0307473_11171252	All Organisms → cellular organisms → Bacteria → Acidobacteria	570	Open in IMG/M
3300031823\|Ga0307478_10642220	Not Available	888	Open in IMG/M
3300031962\|Ga0307479_10008362	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9566	Open in IMG/M
3300031962\|Ga0307479_10056145	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3792	Open in IMG/M
3300031962\|Ga0307479_10222325	All Organisms → cellular organisms → Bacteria → Acidobacteria	1862	Open in IMG/M
3300032180\|Ga0307471_100080671	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2861	Open in IMG/M
3300032205\|Ga0307472_100182573	Not Available	1574	Open in IMG/M
3300032205\|Ga0307472_100218901	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1465	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.06%
Host-Associated	Host-Associated	2.94%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	65.69%
Aquatic	Environmental → Aquatic	31.37%
Plants	Host-Associated → Plants	2.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.69%
Sediment	Environmental → Aquatic → Sediment	18.63%
Freshwater	Environmental → Aquatic → Freshwater	12.75%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	18.63%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	12.75%
Loam	Environmental → Terrestrial → Soil → Loam	6.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.94%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.96%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	34.31%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	18.63%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	8.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.90%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.94%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.96%

Habitat	Taxonomy	Distribution
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	18.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.65%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	10.78%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	8.82%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.82%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	5.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.90%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.90%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.92%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.96%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.96%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.96%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022507	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300027109	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF008 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300030848	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA8 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_107521552	3300001593	Forest Soil	TVERIAARVLGILRVITVPRVWAKEVAMAKVIEFYIPKNFRKSFKWVPGLQRGKILEFCPQTKKSA*
Ga0062385_100305864	3300004080	Bog Forest Soil	MTTLHKTVERSAARVLGILRVITFSRVWAKEVAMAKVIEFYIPKNFRKSFKWAPELQRGKILEFCPQTKKSA*
Ga0062387_1001429822	3300004091	Bog Forest Soil	MTSIDKVIAGIAGGLGILKGITAPRAWTKKVAMAKVIEFHIPKNFRKSRKWVPELQRGKILEFYAQTMKSA*
Ga0070709_105305171	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MAAIHKTIVRIAARVLRILKTIMVLRAWTKEVAVAKVIEFYVPNNFRKALKWVPEVQRGKILEFCPQTKKSA*
Ga0070711_1011491632	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MAAKYKAIVRIAARILRILKIIVLPRAWIKEVAVAKVIEFYVPKNLRKPLKWVPELQRGKILEFCPQTKKSA*
Ga0070730_104335842	3300005537	Surface Soil	LDQRYWRLLEMAAIHKTIVRIAARVLRILKTIMVLRAWTKEVAVAKVIEFYVPNNFRKALKWVPEVQRGKILEFCPQTKKSA*
Ga0070732_101358142	3300005542	Surface Soil	LDSMLSGLLKMAAKYKAIVRIAARILRILKIIVLPRAWIKEVAVAKVIEFYVPKNLRKPLKWVPELQRGKILEFCPQTKKSA*
Ga0070732_105279431	3300005542	Surface Soil	VHKTVERIATRVLGILRVITISRVWAKEVAMAKVIAFYIPRNFRKSFKWVPELQRGKILEFCPQ
Ga0070732_106470422	3300005542	Surface Soil	MTALRKTVERIAARVLGILRVITVPRVGAKEVAMAKVIEFYIPKNFRKSFKWVPELQRGKILEFCPQTKKSA*
Ga0075023_1002067082	3300006041	Watersheds	MTALHKTVERIAARVLRMLRVITVPGVWVKEVAMAKIIEFYIPKNFWKSFRWVPELQRGKILEFCPQTKKSA*
Ga0075028_1003737642	3300006050	Watersheds	MTALYKTVERIAARVLGILRMITVSRVWAKEVAMAKVIEFYIPQNFRKSFKWVPELQRGKILEFCPQTKKSA*
Ga0075028_1005860162	3300006050	Watersheds	MTALHKTVERIAARVLRILRMITVPRVWAKEVAMAKVIEFYIPKNFRKSFKWVPELQRGKILEFCPQTKKS
Ga0075029_1001653602	3300006052	Watersheds	MTALHKTVGRIAARVLGILRVITVSRVWAKEVAMAKVIEFYIPKNFRKSFKWVPELQRGKIIEFCPQTKKSA*
Ga0075029_1012162081	3300006052	Watersheds	HKTVERIAARVLGILRAITISRVWAKEVAMAKVIEFYIPRNFRKSFKWVPELQRGKILEFCPQTKKSA*
Ga0075017_1011865372	3300006059	Watersheds	MTAPHKTVERIAARVLGIPRVITVPRVWAKEVAMAKVIEFYIPKNFRKSFTWVPELQRGKILEFCPQTKKSA*
Ga0075030_1000276104	3300006162	Watersheds	VHKTVERIAARVLGILRAITISRVWAKEVAMAKVIEFYIPRNFRKSFKWVPELQRGKILEFCPQTKKSA*
Ga0075030_1003192962	3300006162	Watersheds	MAAIYKAIVRIAARVLRLLKTIMVLRAWTKEVAMAKVIEFYVPSNFRKALKWVPEVQRGKILEFCPQTKKSA*
Ga0075030_1006973672	3300006162	Watersheds	MTALDITVERIAASVLGLLRMIAVPRVWAKEVAMAKVIEFYIPQNFRKSFKWVPELQRGRILEFCPQTKKSA*
Ga0075030_1014854212	3300006162	Watersheds	MTALHKTVERIAARVLGILRVITVPRVWAKEVAMAKVIEFYIPKNFRRSFKWVPELQRGKILEFCPQTKKSA*
Ga0075021_105705562	3300006354	Watersheds	MTALHKTVERIAARVLRILRMITVPRVWAKEVAMAKVIEFYIPKNFRKSFKWVPELQRGKILEFCPQTKKSA*
Ga0099830_101747063	3300009088	Vadose Zone Soil	MTALHKTVERIAARVLGILRVITVPRVWAKEVAMAKVIEFYIPKNFRKSFKWVPELQRGKILEFCPQTKKSA*
Ga0099828_102801592	3300009089	Vadose Zone Soil	MTGWRQYTEQASSRIAARALGILRVITVPRVWAKEVAMAKVIEFYIPKNFRKSFKWVPELQRGKILEFCPQTKKSA*
Ga0116216_105333382	3300009698	Peatlands Soil	MTALHKTVERIAARVLGILRVITVPRVWAKEVAMAKAIEFYIPKNFRKSFKWVPELQWEKILEFCPQTKKSA*
Ga0126373_103342452	3300010048	Tropical Forest Soil	MIAAKAHEILQIIAVPRAWAKEVAMAKVIEFYVPKSFRKSFDWVPELRRGKILEFCPQTKKSA*
Ga0126379_104412692	3300010366	Tropical Forest Soil	MTALHKTVCMIAAKAHEILQIIAVPRAWAKEVAMAKVIEFYVPKSFRKSFDWVPELRRGKILEFCPQTKKSA*
Ga0126379_110216091	3300010366	Tropical Forest Soil	MTGGIKRLRGTAARILGVFKAIAVLGGWIKEVAMAKVIEFYIPKNFRRPMKWVRELQCGRILEFRTQTKKSA*
Ga0136449_1000186711	3300010379	Peatlands Soil	MTALHKTVERIAARVLGILRMTTVPRVWAKEVAMAKVIEFYIPKNFRKSFKWVPELQRGKILEFCPQTKKSA*
Ga0137392_106821662	3300011269	Vadose Zone Soil	MTAMHKTVERIAARVLGIIRMIKVPRVWAKEVAMAKVIEFYIPKNFRKSFKWVPELQQGKILEFCPQTKKSA*
Ga0137391_106840442	3300011270	Vadose Zone Soil	MTAMHKTVERIAARVLGIIRMIKVPRVWAKEVAMARIIQFYIPKNFRRSFKWVPELQRGKILDFCPPTRKSA*
Ga0137378_102895662	3300012210	Vadose Zone Soil	MSAGWRQYTERASSGFTARVLGILRVIKVPRVWAKEVAMAKVIEFYIPKNFRKSFKWVSELQRGKILEFCPQTKKSA*
Ga0137387_112416741	3300012349	Vadose Zone Soil	ARASSGFTARVLGILRVIKVPRVWAKEVAMAKVIEFYIPKNFRKSFKWVSELQRGKILEFCPQTKKSA*
Ga0137390_101297462	3300012363	Vadose Zone Soil	MTAMHKTVERIAARVLGIIRMIKVPRVWAKEVAMARIIEFYIPKNFRRSFKWVPELQRGKILDFCPPTRKSA*
Ga0137397_105381331	3300012685	Vadose Zone Soil	LKGSAPEVLGILRVITVPRVCAKEVAMAKVIEFYIPKNFRKSFKWVAELQRGKILEFCPQTKKSA*
Ga0132257_1008913622	3300015373	Arabidopsis Rhizosphere	MTALYKRVERIAARVLGILRVITVPRVWAKEVSMAKVIEFYIPKSFQKSFKWVPELQRGKILGFYPQTKKSA*
Ga0132255_1007883031	3300015374	Arabidopsis Rhizosphere	MAAIYKAIVRIAARVLGILKTIMVLRAWTKEVAMAKVIEFYVPNNFRKALKWVPEVQRGKILEFCPQTKKSA*
Ga0132255_1008823903	3300015374	Arabidopsis Rhizosphere	MTALYKRVERIAARVLGILRVITVPRVWAKEVSMAKVIEFYIPKSFQKSFKWVPELQRGKILEFCP
Ga0187818_100652682	3300017823	Freshwater Sediment	MKRLKGIAARVLGILRLITVSRVWAKEVAMAKVIEFYIPKNFRKSFKWVPELQRGKILEFCPQAKKSA
Ga0187824_100872582	3300017927	Freshwater Sediment	MTALYKTVERIAARVLGILMMITVARVWAKEVAMAKVIEFYIPRNFRKSFKWVPELQRGKILEFCLQTKKAA
Ga0187825_100723982	3300017930	Freshwater Sediment	MTALHKTAERIAARVVGILRMVRVPRVWANEVVMAKVIEFYIPRNFRKSFKWVPELQRGKILEFCLQTKKAA
Ga0187825_102228742	3300017930	Freshwater Sediment	MTALYKTVERIAARVLGILMMITVARVWAKEVAMAKVIEFYIPKNFWKSFKWVPDLQRGKILEFCRQTKKSA
Ga0187821_100430092	3300017936	Freshwater Sediment	MTALYKTVERIAARVLGILMMITVARVWAKEVAMAKVIEFYIPRNFRKSFKWVPELQRGKILEFCPQTKKSA
Ga0187819_106857021	3300017943	Freshwater Sediment	MTALHKTVERIAARVLEILRTITVSKVWAKEVAMAKVIEFYIPRNFRTSLKWVPELQRGKILEFCPQTKKSA
Ga0187782_103854852	3300017975	Tropical Peatland	METIHKEIVRIAASVLGILKAIMVPRTWNKEVAMAKVIEFYIPKNFRRSMKWLPEFQRGRILEFCPQTKKSA
Ga0187823_102011662	3300017993	Freshwater Sediment	MTALHKTAERIAARVVGILRMVRVPRVWANEVVMAKVIEFYIPKNFRKSFKWVPELQRGKILEFCPQAKKSA
Ga0187816_105571992	3300017995	Freshwater Sediment	VVQISVVSDLIGMTALHKTVERIAARVLEILRTITASKVWAKEVAMAKVIEFYIPRNFRTSLKWVPELQRGKILEFCPQTKKSA
Ga0187804_101773732	3300018006	Freshwater Sediment	MTALHKTVERIAARVLEILRTIMVSRVWAKEVAMAKVIEFYIPKNFRQSFKWVPELQRGKILEFCPQAKKSA
Ga0187784_107547472	3300018062	Tropical Peatland	MKDIAKRIVRIAESVLGILKAIMIPRTWNKEVAMAKVIEFYIPRNFRRPMKWVPEFQRGRILEFCPQTKKSA
Ga0210407_100020248	3300020579	Soil	MYTTVKRIAARVLRILRVITVPRLWGKKVGMAKVIEFYIPKSFRKSFKWVPEPQRGKILEFCPQTKKSA
Ga0210407_112160532	3300020579	Soil	MTALHKTVERIAARVLRILRMITVPGVWTREVAVAKVIEFYIPKNFRKSFKWTPELERGQILEFCPQTKKSA
Ga0210407_114012081	3300020579	Soil	MTALRKTVERIAARVLGILRVITVPRVWAKEVAMAKVIEFYLPKNFRRPMKWVPEIQRGKILEFCPQTKKSA
Ga0210403_100564031	3300020580	Soil	QGTGMAAIYGTILRISARAIGILKPIAAPTAGIKEVAMAKVIEFYIPKNFRKSFKWVPELRRGKILEFCPQIKKSA
Ga0210403_112617922	3300020580	Soil	LEIAAIYKTIVRIVARVLTILKRIIVPRAWNKEVAVAKVIEFYIPNSFRKTLKWVPELQRGKIIEFCPQTKKSA
Ga0210399_101320612	3300020581	Soil	MTALRKTVERIAARVLGILRVITVPRVGAKEVAMAKVIEFYIPKNFRKSFKWVPELQRGKILEFWPQTKKSA
Ga0210399_103100002	3300020581	Soil	MAAIEKTIVRIAARVLRILKTIMVPEAWTKEVAVAKVIEFYVPNNFRKALKWVPEVQRGKILEFCPQTKKSA
Ga0210399_108765911	3300020581	Soil	LGLLEIAAIYKTIVRIVARVLTILKRIIVPRAWNKEVAVAKVIEFYIPNSFRKTLKWVPELQRGKIIEFCPQTKKSA
Ga0215015_103138002	3300021046	Soil	MTALHKTVERITARVLGILRMITVPRVWAKEVAMARVIEFYIPKNFQKSFKWVPELQRGKILEFCPQTKKSA
Ga0210405_100055721	3300021171	Soil	DRARVLGILSVITVPRVWAKEVSMAKVIEFYIPKNFQKSFKWVPELQRGKILEFYPQTKKSA
Ga0210396_105227992	3300021180	Soil	LLKMTALPKTIVRIATRVLGILKSITVPSDWTKKVAMAKVVEFYIPKNFRRPMKWVPELDRGKVLAFCPQTKKSA
Ga0210387_107382752	3300021405	Soil	MTALYKTVKRIAARVLGILRMITVPRVWAKEVAMAKVIEFYIPKNFRKSFKWVPELQRGKILEFCPQTKKSA
Ga0210384_107871641	3300021432	Soil	MTAVDKTVARIAAKVLGILRVITVSRVWAKEVAMAKVIEFYIPKNFRRRMKWVPEIPRGKILEFCPQTKKSA
Ga0210402_102608082	3300021478	Soil	VDKTVERIAARVLGILRVITVPRVWAKEVAMAKVIEFYIPKNFRRRMKWVPEIQRGKILEFCPQTKKSA
Ga0210402_104542991	3300021478	Soil	AMHKSVERIAARVLGLLRMIRAPRAWAKEVAMAKVIEFHIPKSFRKSFRWVPELQRGKILEFYPQRKKSA
Ga0210409_101672512	3300021559	Soil	MTALYKTAERIAARVLGILSVITVPRVWAKEVSMAKVIEFYIPKNFQKSFKWVPELQRGKILEFYPQTKKSA
Ga0126371_111027621	3300021560	Tropical Forest Soil	MTALHKTVCMIAAKAHEILQIIAVPRAWAKEVAMAKVIEFYVPKSFRKSFDWVPELRR
Ga0126371_132971781	3300021560	Tropical Forest Soil	MTGGVKRLRGIARILGVFKAIAVPRGWIKEVAMAKVIEFYIPKNFRRPMKWVRELQCGRILEFRAQTKKSA
Ga0222729_10021003	3300022507	Soil	VLRILRMITVPGVWTREVAVAKVIEFYIPKNFRKSFKRTPELERGQILEFCPQTKKSA
Ga0242661_10987222	3300022717	Soil	MTALHKTVERIAARVLRILRMITVPGVWTREVAVAKVIEFYIPKNFRKSFKRTPELERGQILEFCPQTKKSA
Ga0208603_10067992	3300027109	Forest Soil	VHKTVERIAAGVLGILRVITVPRVWAKEVAMAKVIEFCIPKNFRKSFKWVPELQRGRILEFYPQTKKSA
Ga0209117_10129793	3300027645	Forest Soil	MTALYKTVERIAARVLGILRVITVPRVWAKEVSMAKVIEFYIPKNFRKSFKWVPELQRGKILEFYPQTKKSA
Ga0209117_10281283	3300027645	Forest Soil	LHKTVERIAARVLGIPRMIAIRGVWAREVAMAKVIDFYIPKNFRRSFNWVPEPQRGKIIEFCARTKKSA
Ga0209446_10369432	3300027698	Bog Forest Soil	MTTLHKTVERSAARVLGILRVITFSRVWAKEVAMAKVIEFYIPKNFRKSFKWAPELQRGKILEFCPQTKKSA
Ga0209448_101120092	3300027783	Bog Forest Soil	MTSIDKVIAGIAGGLGILKGITAPRAWTKKVAMAKVIEFHIPKNFRKSRKWVPELQRGKILEFYAQTMKSA
Ga0209580_100923483	3300027842	Surface Soil	LGLLEIAAIYKPIVRIVARVLTILKRIIVPRAWNKEVAVAKVIEFYIPNSFRKTLKWVPELQRGKIIEFCPQTKKSA
Ga0209701_101421672	3300027862	Vadose Zone Soil	MTALHKTVERIAARVLGILRVITVPRVWAKEVAMAKVIEFYIPKNFRKSFKWVPELQRGKILEFCPQTKKSA
Ga0209380_105326381	3300027889	Soil	MTALYKTVERIAARVLGILRMITVSRVWAKEVAMARVIEFYIPKNFRKSFKWVPELQRGKILEFCPQTKKSA
Ga0209068_103927872	3300027894	Watersheds	MTALHKTVERIAARVLRILRMITVPRVWAKEVAMAKVIEFYIPRNFRKSFKWVPELQRGKILEFCPQTKKSA
Ga0209583_101898052	3300027910	Watersheds	MTALHKTVERIAARVLRMLRVITVPGVWVKEVAMAKIIEFYIPKNFWKSFRWVPELQRGKILEFCPQTKKSA
Ga0209698_100333184	3300027911	Watersheds	VHKTVERIAARVLGILRAITISRVWAKEVAMAKVIEFYIPRNFRKSFKWVPELQRGKILEFCPQTKKSA
Ga0209698_101353623	3300027911	Watersheds	MTALHKTVERIAARVLRMLRVITVPRVWAKEVAMAKVIEFYIPRNFRKSLKWVPELQRGKILEFCPQTKKSA
Ga0209698_101421772	3300027911	Watersheds	MTALHKTVERIAARVLGILRMTRVSRVSAKEVAMAKVIEFYIPKNFRKSFKWVPKLQRGKMLEFCPQTKKSA
Ga0209698_102920262	3300027911	Watersheds	MAAIYKAIVRIAARVLRLLKTIMVLRAWTKEVAMAKVIEFYVPSNFRKALKWVPEVQRGKILEFCPQTKKSA
Ga0209698_106350951	3300027911	Watersheds	MTALDITVERIAASVLGLLRMIAVPRVWAKEVAMAKVIEFYIPQNFRKSFKWVPELQRGRILEFCPQTKKSA
Ga0209069_101020371	3300027915	Watersheds	LRGMTALHKTVERIAARVLGILRVITISRVWAEEVAMAKVIEFYIPKNFRKSFKWVPELQRGKILEFCPQTKKSA
Ga0075388_111104211	3300030848	Soil	MTVLHKTVERIAARVLGILRVITVPRVRAKEVAMAKVIEFYIPKNFRKSFKWVPELQRGKILEFCPQTKKSA
Ga0170834_1072547872	3300031057	Forest Soil	MAAIYGTILRILTRALGILRPIAAPTTEIKEVAMAKVIEFYIPKNFRRSFKWVPELQRGKILEFCPQTKKSA
Ga0170834_1092910822	3300031057	Forest Soil	MHKTVERIAARVLGILRMITVPKVWAKKVAMAKVIEFYIPKNFRKSFKWVPELQRGRILEFFPQTKKSA
Ga0170834_1109650442	3300031057	Forest Soil	VAAIHKTLVRIAARVLRMLKTTMVPRAWTKEVAVAKVIEFYVPNTFRKALKWVPEVQRGKIIEFCPQTKKSA
Ga0170823_119998222	3300031128	Forest Soil	MTVLHKTVERIAARVLGILRVITVPRVWAKEVAMAKVIEFYIPKNFRKSFKWVPELQRGKILEFCLQTKKSA
Ga0170824_1148538282	3300031231	Forest Soil	MTTLHKTVERIAARVLGILRVITVPRVWAKEAAMAKVIEFYIPKNFRKSLKWVPELQRGKVLEFWPQTKKSA
Ga0170818_1058132122	3300031474	Forest Soil	MTALPKTVERIAATVLGILRVITVPRVWAKEAAMAKVIEFYIPKNFRKSFKWVPELQRGKILEFCLQTKKSA
Ga0310686_1010542242	3300031708	Soil	LLKITAIRETIVRFAARVLRILKMTIVARAWTKEVAMAKVIEFYIPQNFRRLTKWVRELRRGKILELRPQIKKSA
Ga0307477_102879372	3300031753	Hardwood Forest Soil	MTALYKTVERIAARVLGILRVITVPRVWAKEASMAKVIEFYIPKNFRKSFKWAPELQRGKILEFYPPTKKSA
Ga0307475_101017003	3300031754	Hardwood Forest Soil	MTALYKTVERIAARVLGILRVITVPRVWAKEASMAKVIEFYIPKNFRKSFKWAPEFQRGKILEFYPPTKKSA
Ga0307475_101275802	3300031754	Hardwood Forest Soil	MTALHKTVERIAAKVLGILRVITVPRVWAKEVAMAKVIEFYIPKNFRKSFKWVPELQRGRILEFCPQTKKSA
Ga0307473_111712521	3300031820	Hardwood Forest Soil	MTALHKTVERIAAGVLGILGVITVSRVWAREVAMAKVIEFYIPKNFRKSFKWVPELQRGKILEFCLQTKKSA
Ga0307478_106422201	3300031823	Hardwood Forest Soil	MTALHKTVERIAARVLGILTMITVPRVWAKEVAMAKVIEFYIPRNFRKSFKWVPELQRGKILEFCPQTKKSA
Ga0307479_100083625	3300031962	Hardwood Forest Soil	VHKTVERIAARVLGILRVITVPRVWAKEVAMAKVIEFYIPKNFRKSFKWVPELQRGRILEFCPQTKKSA
Ga0307479_100561453	3300031962	Hardwood Forest Soil	MTVLHKTVERIATRVLGILKVITISRVWAKEVAMAKVIAFYIPRNFRKSFKWVPELQRGKILEFCPQTKKSA
Ga0307479_102223253	3300031962	Hardwood Forest Soil	MIALHKTVERIATRLLGILSMITVSRVWAKEVAMAKIIEFYIPKNFRKSFKWVPELQRGKILEFCPQTKKSA
Ga0307471_1000806712	3300032180	Hardwood Forest Soil	MTALHKTVERIAARVLGILRVITVPRVWAEEVAMAKVIEFYIPKNFRKSFKWVPELQRGKILEFCLQTKKSA
Ga0307472_1001825732	3300032205	Hardwood Forest Soil	MAAIHKTIVRIVARVLRILKTIMVLRAWTKEVAVAKVIEFYVPNNFRKALKWVPEVQRGKILEFCPQTKKSA
Ga0307472_1002189012	3300032205	Hardwood Forest Soil	MTALHKTVERIAAGVLGILGVITVSRVWAREVAMAKVIEFYIPKNFRKSLKWVPELQRGKILEFCPQTKKSA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F101283

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences