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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F101230 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 102 |
| Average Sequence Length | 59 residues |
| Representative Sequence | MRRFRQWLSCGAAVMLAVHALGSNALASTAPAPEISPTSISAGLALLAGGVLMLRARRGSK |
| Number of Associated Samples | 73 |
| Number of Associated Scaffolds | 84 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 66.67 % |
| % of genes near scaffold ends (potentially truncated) | 43.14 % |
| % of genes from short scaffolds (< 2000 bps) | 88.24 % |
| Associated GOLD sequencing projects | 64 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.38 |
| Hidden Markov Model |
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| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (80.392 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere (10.784 % of family members) |
| Environment Ontology (ENVO) | Unclassified (62.745 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (82.353 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
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| Classification: | Transmembrane (alpha-helical) | Signal Peptide: | Yes | Secondary Structure distribution: | α-helix: 53.93% β-sheet: 0.00% Coil/Unstructured: 46.07% | Feature Viewer |
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| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.38 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 84 Family Scaffolds |
|---|---|---|
| PF02517 | Rce1-like | 26.19 |
| PF04116 | FA_hydroxylase | 25.00 |
| PF09721 | Exosortase_EpsH | 3.57 |
| PF06480 | FtsH_ext | 1.19 |
| PF01171 | ATP_bind_3 | 1.19 |
| PF11734 | TilS_C | 1.19 |
| PF00326 | Peptidase_S9 | 1.19 |
| PF01916 | DS | 1.19 |
| COG ID | Name | Functional Category | % Frequency in 84 Family Scaffolds |
|---|---|---|---|
| COG1266 | Membrane protease YdiL, CAAX protease family | Posttranslational modification, protein turnover, chaperones [O] | 26.19 |
| COG4449 | Predicted protease, Abi (CAAX) family | General function prediction only [R] | 26.19 |
| COG3000 | Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily | Lipid transport and metabolism [I] | 25.00 |
| COG0037 | tRNA(Ile)-lysidine synthase TilS/MesJ | Translation, ribosomal structure and biogenesis [J] | 1.19 |
| COG0301 | Adenylyl- and sulfurtransferase ThiI (thiamine and tRNA 4-thiouridine biosynthesis) | Translation, ribosomal structure and biogenesis [J] | 1.19 |
| COG0465 | ATP-dependent Zn proteases | Posttranslational modification, protein turnover, chaperones [O] | 1.19 |
| COG0482 | tRNA U34 2-thiouridine synthase MnmA/TrmU, contains the PP-loop ATPase domain | Translation, ribosomal structure and biogenesis [J] | 1.19 |
| COG0519 | GMP synthase, PP-ATPase domain/subunit | Nucleotide transport and metabolism [F] | 1.19 |
| COG0603 | 7-cyano-7-deazaguanine synthase (queuosine biosynthesis) | Translation, ribosomal structure and biogenesis [J] | 1.19 |
| COG1606 | ATP-utilizing enzyme, PP-loop superfamily | General function prediction only [R] | 1.19 |
| COG1899 | Deoxyhypusine synthase | Translation, ribosomal structure and biogenesis [J] | 1.19 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 80.39 % |
| All Organisms | root | All Organisms | 19.61 % |
| Visualization |
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| Habitat | Taxonomy | Distribution |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 10.78% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 7.84% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 7.84% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 6.86% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 5.88% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 5.88% |
| Host-Associated | Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated | 4.90% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 4.90% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 3.92% |
| Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 3.92% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 3.92% |
| Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 2.94% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere | 2.94% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 2.94% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 2.94% |
| Soil | Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil | 1.96% |
| Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 1.96% |
| Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere | 1.96% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 1.96% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere | 1.96% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 1.96% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 1.96% |
| Surface Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil | 0.98% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 0.98% |
| Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil | 0.98% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 0.98% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 0.98% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 0.98% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere | 0.98% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere | 0.98% |
| Visualization |
|---|
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| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300004157 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2 | Environmental | Open in IMG/M |
| 3300004479 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs | Environmental | Open in IMG/M |
| 3300004798 | Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome) | Host-Associated | Open in IMG/M |
| 3300004801 | Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome) | Host-Associated | Open in IMG/M |
| 3300005093 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks | Environmental | Open in IMG/M |
| 3300005288 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 | Host-Associated | Open in IMG/M |
| 3300005290 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 | Host-Associated | Open in IMG/M |
| 3300005294 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil | Environmental | Open in IMG/M |
| 3300005295 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 | Environmental | Open in IMG/M |
| 3300005328 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG | Host-Associated | Open in IMG/M |
| 3300005330 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG | Environmental | Open in IMG/M |
| 3300005332 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Host-Associated | Open in IMG/M |
| 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Environmental | Open in IMG/M |
| 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Host-Associated | Open in IMG/M |
| 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Host-Associated | Open in IMG/M |
| 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Host-Associated | Open in IMG/M |
| 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Host-Associated | Open in IMG/M |
| 3300005365 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG | Environmental | Open in IMG/M |
| 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Host-Associated | Open in IMG/M |
| 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Host-Associated | Open in IMG/M |
| 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Host-Associated | Open in IMG/M |
| 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Host-Associated | Open in IMG/M |
| 3300005466 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG | Environmental | Open in IMG/M |
| 3300005526 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 | Environmental | Open in IMG/M |
| 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Environmental | Open in IMG/M |
| 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Host-Associated | Open in IMG/M |
| 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Host-Associated | Open in IMG/M |
| 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Host-Associated | Open in IMG/M |
| 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Host-Associated | Open in IMG/M |
| 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Host-Associated | Open in IMG/M |
| 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Host-Associated | Open in IMG/M |
| 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Host-Associated | Open in IMG/M |
| 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Host-Associated | Open in IMG/M |
| 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Host-Associated | Open in IMG/M |
| 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Host-Associated | Open in IMG/M |
| 3300010147 | Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300010397 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4 | Environmental | Open in IMG/M |
| 3300010403 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3 | Environmental | Open in IMG/M |
| 3300011333 | Cornfield soil microbial communities from Stanford, California, USA - CI-CA-CRN metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300012904 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1 | Environmental | Open in IMG/M |
| 3300012984 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG | Environmental | Open in IMG/M |
| 3300012985 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG | Environmental | Open in IMG/M |
| 3300012987 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG | Environmental | Open in IMG/M |
| 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Host-Associated | Open in IMG/M |
| 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Host-Associated | Open in IMG/M |
| 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Host-Associated | Open in IMG/M |
| 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Host-Associated | Open in IMG/M |
| 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Host-Associated | Open in IMG/M |
| 3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
| 3300015372 | Soil combined assembly | Host-Associated | Open in IMG/M |
| 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Host-Associated | Open in IMG/M |
| 3300024055 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6 | Environmental | Open in IMG/M |
| 3300025321 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025899 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025901 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300031474 | Fir Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
| Geographical Distribution | |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| Ga0062590_1023378961 | 3300004157 | Soil | MRAPSRLIAAAAAVMLAVHALGTIVLASEPTAVAPEIGPGSISAGLALLAGGVMLFRARRGSK* |
| Ga0062595_1012685202 | 3300004479 | Soil | MRKFSRWLSSGAAVMLAVHALGSNALASTTVPEISPSSISAGLALLAGGVLMLRARR |
| Ga0058859_107488881 | 3300004798 | Host-Associated | MRRFGQVLSACAALMLAVHALGSNALASDPLPALAPEISPMSISAGVALLAGGVLMLRAR |
| Ga0058859_107488882 | 3300004798 | Host-Associated | MRRVGQWLSGGAAVMLAVHALGSNALASAVTPEISPGSISSGLALLAGGVLMLRARRGSK |
| Ga0058860_109984281 | 3300004801 | Host-Associated | MRRFGQGLGVCAALMMTVHALGSNALASEPVGVAVPEISPMSISAGLALLAGGVLMLRAR |
| Ga0058860_109984282 | 3300004801 | Host-Associated | MRRFGQWFSVGAAVMLGVHALSSNALASLSPVGAPEISPDSISAGLALLAGGVLMLRARRGSK* |
| Ga0058860_109984283 | 3300004801 | Host-Associated | VAVHALASNALASANVVPEIGPGSISAGLALVAGGVLMLRARRGSK* |
| Ga0062594_1004286393 | 3300005093 | Soil | MRRFGQVLSACAALMLAVHALGSNALASDPLPALAPEISPMSISAGVALLAG |
| Ga0062594_1016218851 | 3300005093 | Soil | MRRFARGLSVAAAAMLAVHALSSNVLAAVSPAPEISPNSISAGVALLAGGVLMLRARRGSK* |
| Ga0065714_104955911 | 3300005288 | Miscanthus Rhizosphere | MRKFSRWLSGGAAVMVAVHALASNALASANVVPEIGPGSISAGLALVAGGVLMLRARRGSK* |
| Ga0065712_101921471 | 3300005290 | Miscanthus Rhizosphere | MRRFGQGLGVCAALMMTVHALGSNALASEPVGVAVPEISPMSISAGLALLAG |
| Ga0065712_103829112 | 3300005290 | Miscanthus Rhizosphere | MRRFGQWLNCGAAMMMAVHALGSNALASTATPEISPASLSSGLALLAGGVLMLRARRGSK |
| Ga0065705_110556522 | 3300005294 | Switchgrass Rhizosphere | MRRFRQWLSCGAAVMLAVHALGSNALASAVTPEISPGSISSGLALLVGGVLMLRARRGSK |
| Ga0065707_105873332 | 3300005295 | Switchgrass Rhizosphere | MRRFRQWLSCGVAVMLAVHALGSNALASAVTPEISPGSISSGLALLVGGVLMLRARRGSK |
| Ga0070676_100802883 | 3300005328 | Miscanthus Rhizosphere | MRRFGQVLSACAALMLAVHALGSNALASDPLPALAPEISPMSISAGVALLAGGVLMLRARRGSK* |
| Ga0070690_1000750741 | 3300005330 | Switchgrass Rhizosphere | FSVGAAVMLGVHALSSNALASLSPVGAPEISPDSISAGLALLAGGVLMLRARRGSK* |
| Ga0070690_1000750742 | 3300005330 | Switchgrass Rhizosphere | MRRFGQVLGVCAALMVTVHALGSNALASEPVGVAVPEISPMSISAGLALLAGGVLMLRARRRSK* |
| Ga0066388_1046396631 | 3300005332 | Tropical Forest Soil | MRNHGRWVIAAAAVLSTLHALGGIALAQVEVPEIDPGSISAGVALLTGGILMLRARRGSK |
| Ga0070666_107056611 | 3300005335 | Switchgrass Rhizosphere | GSSVLASGGAAAPEISPTSISAGVALLAGGVLMLRARRGSK* |
| Ga0070682_1004909233 | 3300005337 | Corn Rhizosphere | MRRFGQGLGVCAALMVTVHALGSNALASEPVGVAVPEISPMSISAGLALLAGGVLMLRARRRSK* |
| Ga0070682_1009649492 | 3300005337 | Corn Rhizosphere | MRRFGQWLNCGAAVMMAVHALGSNALASTATPEISPASLSSGLALLAGGVLMLRARRGSK |
| Ga0068868_1019864861 | 3300005338 | Miscanthus Rhizosphere | MRRFGQGLGVCAALMVTVHALGSNALASEPVGVAVPEISPMSISAGLALLAGGV |
| Ga0068868_1019864863 | 3300005338 | Miscanthus Rhizosphere | GGAAVMVAVHALASNALASANVVPEIGPGSISAGLALVAGGVLMLRARRGSK* |
| Ga0070675_1004894022 | 3300005354 | Miscanthus Rhizosphere | AAAMLAVHALSSNVLAAVSPAPEISPNSISAGVALLAGGVLMLRARRGSK* |
| Ga0070671_1014072312 | 3300005355 | Switchgrass Rhizosphere | FGQGLGVCAALMVTVHALGSNALASEPVGVAVPEISPMSISAGLALLAGGVLMLRARRRSK* |
| Ga0070673_1002338091 | 3300005364 | Switchgrass Rhizosphere | MRRFGQGLGVCAALMMTVHALGSNALASEPVGVAVPEISPMSISAGLALLAGGVLM |
| Ga0070688_1003104983 | 3300005365 | Switchgrass Rhizosphere | MRRFGQGLGVCAALMMTVHALGSNALASEPVGVAVPEISPMSISAGLALLAGGVLMLRARRRSK* |
| Ga0070659_1011261511 | 3300005366 | Corn Rhizosphere | MRRFGQVLSACAALMLAVHALGSNALASDPLPALAPEISPMSISAGVALLAGGVL |
| Ga0070667_1000604481 | 3300005367 | Switchgrass Rhizosphere | MRRFSRWFSSGAAVMLAVHALGSSVLASGGAAAPEISPTSISAGVALLAGGVLMLRARRGSK* |
| Ga0070663_1014003821 | 3300005455 | Corn Rhizosphere | EDVMRRFGQGLGVCAALMMTVHALGSNALASEPVGVAVPEISPMSISAGLALLAGGVLMLRARRRSK* |
| Ga0068867_1008428341 | 3300005459 | Miscanthus Rhizosphere | MRGFGRVLNACAALMLAVHALDSSVLASGGQAAPEISPTSISAGLALLAGGVLMLMARRGSK* |
| Ga0068867_1008428342 | 3300005459 | Miscanthus Rhizosphere | MRRFGQWFSVGAAVMLAVHALSSNVLASPPAVGAPEISPDSISAGLALLTGGVLMLRARRGSK* |
| Ga0068867_1008428343 | 3300005459 | Miscanthus Rhizosphere | MRRFAQGLGVCAAAMLALHALSSDALAAVSPAPEISPHSISAGFALLAGGVLMLRARRGSK* |
| Ga0070685_100928013 | 3300005466 | Switchgrass Rhizosphere | MRRFGQWFSVGAAVMLGVHALSANALASLSPVGAPEISPDSISAGLALLAGGVLMLRARRGSK* |
| Ga0073909_101643991 | 3300005526 | Surface Soil | WLSCGAAVMLAVHALGSNALASTAPAPEISPTSISAGLALLAGGVLMLRARRGSK* |
| Ga0070684_1000725291 | 3300005535 | Corn Rhizosphere | GMRRVGQWLSGGAAVMLAVHALGSNALASAVTPEISPGSISSGLALLAGGVLMLRARRGSK* |
| Ga0068853_1010981761 | 3300005539 | Corn Rhizosphere | AMLAVHALSSNVLAAVSPAPEISPNSISAGVALLAGGVLMLRARRGSK* |
| Ga0068853_1012610982 | 3300005539 | Corn Rhizosphere | MRRVGQWLSGGAAVMLAVHSLGSNALASAVTPEISPGSISSGLALLAGGVLMLRARRGSK |
| Ga0070672_1002987684 | 3300005543 | Miscanthus Rhizosphere | AVHALASNALASANVVPEIGPGSISAGLALVAGGVLMLRARRGSK* |
| Ga0070664_1004411941 | 3300005564 | Corn Rhizosphere | MRRFGQVLSACAALMLAVHALGSNALASDPLPALAPEISPMSISAGVALLAGGV |
| Ga0068852_1023258471 | 3300005616 | Corn Rhizosphere | MRRFARGLSVAAAAMLAVHALSSNVLAAVSPAPEISPNSISAGVALLAGGVLMLRAR |
| Ga0068852_1023258473 | 3300005616 | Corn Rhizosphere | AAVMLAVHALGSNALASAVTPEISPGSISSGLALLAGGVLMLRARRGSK* |
| Ga0068864_1021458502 | 3300005618 | Switchgrass Rhizosphere | ERAGVRSRTQLEDFMRRFGQWFSVGAAVMLGVHALSSNALASLSPVGAPEISPDSISAGLALLAGGVLMLRARRGSK* |
| Ga0068871_1022221402 | 3300006358 | Miscanthus Rhizosphere | MRGFGRVLNACAALMLAVHALGSNVLASGGQAAPEISPTSISAGLALLAGGVLMLRARRGSK* |
| Ga0068871_1022221403 | 3300006358 | Miscanthus Rhizosphere | WLNCGAAVMMAVHALGSNALASTATPEISPASLSSGLALLAGGVLMLRARRGSK* |
| Ga0068865_1006791872 | 3300006881 | Miscanthus Rhizosphere | MVTVHALGSNALASEPVGVAVPEISPMSISAGLALLAGGVLMLRARRRSK* |
| Ga0105243_130926301 | 3300009148 | Miscanthus Rhizosphere | MRRFGQVLSGCAALMLAVHALGSNVLASDPPPLATPEISPMSISAGLALLAGGVLMLRARRGSK* |
| Ga0105243_130926302 | 3300009148 | Miscanthus Rhizosphere | MRRFSRWFSSGAAVMLAVHALTSPALAQSTAPVPEIGPGMISTGLAVLASGALMLRARRGSK* |
| Ga0105241_103698682 | 3300009174 | Corn Rhizosphere | MRRFRQWLSGGAAVMVAVHALGSNAVASTAPAPEISPASISAGLAILAGGVLMLRARRGSK* |
| Ga0105241_103698683 | 3300009174 | Corn Rhizosphere | MRKFGQWLSWGVAVMLAVHALGSNALASAVTPEISPGSISAGLALLAGGVLILRARRGSK |
| Ga0105241_106818042 | 3300009174 | Corn Rhizosphere | MRTFGRGFSACWALMLAVHALGSNVLASGPVGVPVPEISPMSISAGLALLAGGVLMLRARRGSK* |
| Ga0105241_106818043 | 3300009174 | Corn Rhizosphere | MRRFGQWFSVGAAVMLAVHALSSNVLASPPPVRAPEISPDSISAGLALLTGGVLMLRARRGSK* |
| Ga0105242_100352014 | 3300009176 | Miscanthus Rhizosphere | MMTVHALGSNALASEPVGVAVPEISPMSISAGLALLAGGVLMLRARRRSK* |
| Ga0105242_109022372 | 3300009176 | Miscanthus Rhizosphere | MRRFRQWLSCGAAVMLAVHALGSNALASTAPAPEISPTSISAGLALLAGGVLMLRARRGSK* |
| Ga0126319_15360901 | 3300010147 | Soil | MRRLGQCVCGATAVMLTLHALGSDALASINVVPEISPGSISAGLALVAGGVLMLRARRGSK* |
| Ga0134124_116729291 | 3300010397 | Terrestrial Soil | NALASGAVGVPVPEISPMSISAGLALLAGGVLMLRARRGSK* |
| Ga0134123_121807341 | 3300010403 | Terrestrial Soil | MLAVHALGSNALASDPLPALAPEISPMSISAGVALLAGGVLMLRARRGSK |
| Ga0127502_100582292 | 3300011333 | Soil | MLALHALSTGALASNAVAVPEINPGSISAGLALLAGGVLMLRARRRK* |
| Ga0157282_103842061 | 3300012904 | Soil | MRESSRLIAAAAAVMLTVHALGTIVLASEPPTVAAPEIGPGSISAGLALLAGGVMMFRARRGSK* |
| Ga0164309_101159863 | 3300012984 | Soil | MRRFGQWFSVGAAVMLGVQALSSNALASLSPVGAPEISPDSISAGLALLAGGVLMLRARRGSK* |
| Ga0164309_101159864 | 3300012984 | Soil | MRRFGQVLGVCAALMVTVHALSSNALASEPVGVAVPEISPMSISAGLALLAGGVLMLRARRRSK* |
| Ga0164308_101577553 | 3300012985 | Soil | MRRFGQWFSVGAAVMLGVHALSSNALASLSPVGAPEISPDSISAGLALLAGGVLMLRARRGS |
| Ga0164307_104546122 | 3300012987 | Soil | LEDFMRRFGQWFSVGAAVMLGVHALSSNALASLSPVGAPEISPDSISAGLALLAGGVLMLRARRGSK* |
| Ga0164307_108287332 | 3300012987 | Soil | MVDVGMNVFQRGSGMRRFRQWLSCGAAVMLAVHALGSNALASTAPAPEISPTSISAGLALLAGGVLMLRARRGSK* |
| Ga0157374_101494644 | 3300013296 | Miscanthus Rhizosphere | MFGQGLGVCAALMVTVHALGSNALASEPVGVAVPEISPMSISAGLALLAGGVLMLRARRRSK* |
| Ga0157375_113763693 | 3300013308 | Miscanthus Rhizosphere | MKVFQRRNGMRRFGQWLSCGAAVMLAVHALGSNALASTAPAPEISPTSISAGLALLAGGVLMLRARRGSK* |
| Ga0163163_102714885 | 3300014325 | Switchgrass Rhizosphere | LGSDALASTVTPEISPGSIASGLALLAGGVLMLRARRGSK* |
| Ga0157379_120534161 | 3300014968 | Switchgrass Rhizosphere | SVGAAVMLAVHALSSNVLASPPAVGAPEISPDSISAGLALLAGGVLMLRARRGSK* |
| Ga0157379_120534162 | 3300014968 | Switchgrass Rhizosphere | MFGQGLGVCAALMMTVHALGSNALASEPVGVAVPEISPMSISAGLALLAGGVLMLRARRRSK* |
| Ga0157376_107128822 | 3300014969 | Miscanthus Rhizosphere | FGQWFSVGAAVMLAVHALSSNVLASPPAVGAPEISPDSISAGLALLTGGVLMLRARRGSK |
| Ga0132258_118933673 | 3300015371 | Arabidopsis Rhizosphere | LEELMRRFGQVLSACAALMLAVHALGSNVLASSDPVPAVAPEISPTSISAGLALLAGGFLMLRARRGSK* |
| Ga0132256_1019740262 | 3300015372 | Arabidopsis Rhizosphere | MRRFGQVLSACAALMLAVHALGSNALASGPVGVPVPEISPMSISAGLALLAGGVLMLRARRGSK* |
| Ga0163161_100191175 | 3300017792 | Switchgrass Rhizosphere | MRRFGQWFSVGAAVMLGVHALSSNALASLSPVGAPEISPDSISAGLALLAGGVLMLRARRGSK |
| Ga0247794_103467151 | 3300024055 | Soil | AVHALGSNVLASEPPAVATPEISPMSISAGLALLAGGVLMLRARRGSK |
| Ga0207656_102188512 | 3300025321 | Corn Rhizosphere | MRKFSRWLSGGAAVMVAVHALASNALASANVVPEIGPGSISAGLALVAGGVLMLRARRGS |
| Ga0207656_103975002 | 3300025321 | Corn Rhizosphere | ASDPLPALAPEISPMSISAGVALLAGGVLMLRARRGSK |
| Ga0207642_101172183 | 3300025899 | Miscanthus Rhizosphere | MRRFGQGLGVCAALMMTVHALGSNALASEPVGVAVPEISPMSISAGLALLAGGVLMLRARRRSK |
| Ga0207688_106849212 | 3300025901 | Corn, Switchgrass And Miscanthus Rhizosphere | MRRFGQVLSACAALMLAVHALGSNALASDPLPALAPEISPMSISAGVALLAGGVLMLRARRGSK |
| Ga0207688_106849213 | 3300025901 | Corn, Switchgrass And Miscanthus Rhizosphere | MRRFARGLSVAAAAMLAVHALSSNVLAAVSPAPEISPNSISAGVALLAGGVLMLRARRGS |
| Ga0207647_100544513 | 3300025904 | Corn Rhizosphere | MRRFGQVLSACAALMLAVHALGSNALASDPLPALAPEISPMSISAGIALLAGGVLMLRARRGSK |
| Ga0207654_104318683 | 3300025911 | Corn Rhizosphere | MRRFGQWFSVGAAVMLAVHALSSNVLASPPAVGAPEISPDSISAGLALLTGGVLMLRARRGSK |
| Ga0207654_104318684 | 3300025911 | Corn Rhizosphere | LAVHALGSNVLASGPVGVPVPEISPMSISAGLALLAGGVLMLRARRGSK |
| Ga0207654_104737132 | 3300025911 | Corn Rhizosphere | MRRFRQWLSGGAAVMVAVHALGSNAVASTAPAPEISPASISAGLAILAGGVLMLRARRGS |
| Ga0207694_116921642 | 3300025924 | Corn Rhizosphere | SNALASLSPVGAPEISPDSISAGLALLAGGVLMLRARRGSK |
| Ga0207659_114544651 | 3300025926 | Miscanthus Rhizosphere | FARGLSVAAAAMLAVHALSSNVLAAVSPAPEISPNSISAGVALLAGGVLMLRARRGSK |
| Ga0207690_116192922 | 3300025932 | Corn Rhizosphere | LEETMRRFGQVLSACAALMLAVHALGSNALASDPLPALAPEISPMSISAGVALLAGGVLMLRARRGSK |
| Ga0207706_101228544 | 3300025933 | Corn Rhizosphere | LAVHALSSNVLAAVSPAPEISPNSISAGVALLAGGVLMLRARRGSK |
| Ga0207686_100754402 | 3300025934 | Miscanthus Rhizosphere | MRRFSRWFSSGAAVMLAVHALGSSVLASGGAAAPEISPTSISAGVALLAGGVLMLRARRGSK |
| Ga0207686_100754403 | 3300025934 | Miscanthus Rhizosphere | MRRFRQWLSCGAAVMLAVHALGSNALASTAPAPEISPTSISAGLALLAGGVLMLRARRGS |
| Ga0207709_100853503 | 3300025935 | Miscanthus Rhizosphere | MRRFGQWFSVGAAVMLGVHALSANALASLSPVGAPEISPDSISAGLALLAGGVLMLRARRGSK |
| Ga0207691_105435761 | 3300025940 | Miscanthus Rhizosphere | AVHALASNALASANVVPEIGPGSISAGLALVAGGVLMLRARRGSK |
| Ga0207711_104283841 | 3300025941 | Switchgrass Rhizosphere | GVRSRTQLEDAMRRFSRWFSSGAAVMLAVHALGSSVLASGGAAAPEISPTSISAGVALLAGGVLMLRARRGSK |
| Ga0207711_108391372 | 3300025941 | Switchgrass Rhizosphere | MRRFRQWLSCGAAVMLAVHALGSDALASTVTPEISPGSIASGLALLAGGVLMLRARRGSK |
| Ga0207689_108315822 | 3300025942 | Miscanthus Rhizosphere | MRRFARGLSVTAAAILAVHALSSNVLAAVSPAPEISPHSISAGFALLAGGVLMLRARRGS |
| Ga0207689_115888341 | 3300025942 | Miscanthus Rhizosphere | MRRVGQWLSGGAAVMLAVHALGSNALASAVTPEISPGSISSGLALLAGGVLMLRARRG |
| Ga0207639_109519802 | 3300026041 | Corn Rhizosphere | ALGSNALASDPLPALAPEISPMSISAGVALLAGGVLMLRARRGSK |
| Ga0207678_117530492 | 3300026067 | Corn Rhizosphere | LAVHALSSNVLASPPAVGAPEISPDSISAGLALLTGGVLMLRARRGSK |
| Ga0207641_104375682 | 3300026088 | Switchgrass Rhizosphere | MRRFGQGLGVCAALMLTVHALGSNALASEPVGVAVPEISPMSISAGLALLAGGVLMLRARRRSK |
| Ga0207648_112333741 | 3300026089 | Miscanthus Rhizosphere | RAEVRNRTIGGAMRRFGQWFSVGAAVMLAVHALSSNVLASPPAVGAPEISPDSISAGLALLTGGVLMLRARRGSK |
| Ga0207648_112333742 | 3300026089 | Miscanthus Rhizosphere | MRRFAQGLGVCAAAMLALHALSSDALAAVSPAPEISPHSISAGLALLAGGVLMLRARRGS |
| Ga0268265_126334251 | 3300028380 | Switchgrass Rhizosphere | RFGQVLSACAALMLAVHALGSNALASDPLPALAPEISPMSISAGVALLAGGVLMLRARRGSK |
| Ga0170818_1032636871 | 3300031474 | Forest Soil | MRRFGQVLSACAALMLAVHALSSNVLASDPPTVAIAPEISPTSISAGLALLAGGFLMLRARRGSK |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |