Metagenome / Metatranscriptome Family F101208

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F101208
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	76 residues
Representative Sequence	MGKLQIAFSCKTVTVCVLLTLLLSGCYSNTAQYFGNATDTSMKMEHNTTILNAETQQLLESMVKSLSEVNFEYEVITTQ
Number of Associated Samples	71
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	80.39 %
% of genes near scaffold ends (potentially truncated)	30.39 %
% of genes from short scaffolds (< 2000 bps)	94.12 %
Associated GOLD sequencing projects	62
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (96.078 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh (73.529 % of family members)
Environment Ontology (ENVO)	Unclassified (75.490 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (98.039 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102 1BBAY94_100084916 2BBAY93_101028501 3Ga0078893_100796112 4Ga0075511_10023733 5Ga0075476_103358851 6Ga0075475_100892902 7Ga0075475_104513451 8Ga0075480_101717032 9Ga0075480_103336571 10Ga0129348_11174432 11Ga0129345_10739811 12Ga0129342_12405831 13Ga0129349_12875601 14Ga0129353_14499802 15Ga0129352_108336791 16Ga0160423_100511811 17Ga0160423_108720711 18Ga0163109_100702754 19Ga0163109_103073492 20Ga0116813_10710032 21Ga0182057_10381451 22Ga0182092_10251963 23Ga0182052_11159071 24Ga0182062_13057682 25Ga0182080_17853972 26Ga0181565_103929851 27Ga0181565_105128111 28Ga0181565_107021072 29Ga0181565_107385881 30Ga0181552_100487324 31Ga0181552_100619424 32Ga0181607_100361306 33Ga0181607_103056822 34Ga0181577_102983192 35Ga0181577_103156131 36Ga0181577_103434901 37Ga0181583_106221471 38Ga0181583_107496421 39Ga0181583_109190421 40Ga0181571_101097442 41Ga0181571_103370491 42Ga0181571_104364211 43Ga0181571_109507852 44Ga0181581_106511021 45Ga0181589_106434831 46Ga0181576_102607281 47Ga0181576_103835132 48Ga0181576_104637292 49Ga0181576_105802491 50Ga0181569_101429834 51Ga0181569_103198572 52Ga0181569_104699171 53Ga0181569_105399532 54Ga0181569_110256971 55Ga0181569_111235691 56Ga0181600_101328543 57Ga0181606_102735902 58Ga0181561_102400232 59Ga0181558_104429991 60Ga0181567_104630952 61Ga0181567_107027121 62Ga0181591_103544572 63Ga0181566_101886832 64Ga0181568_107351232 65Ga0181564_101121253 66Ga0181564_102789822 67Ga0182064_12168331 68Ga0182066_10687021 69Ga0182061_11722581 70Ga0182069_13394751 71Ga0182065_10113051 72Ga0182059_14269571 73Ga0182073_12878402 74Ga0182075_16052861 75Ga0181562_100771191 76Ga0181562_103407131 77Ga0181574_106833652 78Ga0181578_104349601 79Ga0181604_104662412 80Ga0211488_100813132 81Ga0213867_10794491 82Ga0213860_102073852 83Ga0213866_102778252 84Ga0255783_101054191 85Ga0255781_103738282 86Ga0255780_101071631 87Ga0255754_105216411 88Ga0255782_101290403 89Ga0255782_102490911 90Ga0255743_102514111 91Ga0255743_103306232 92Ga0255743_103964941 93Ga0255743_104163301 94Ga0255751_102378282 95Ga0255762_101650631 96Ga0255777_105447821 97Ga0255759_106978031 98Ga0255763_11890902 99Ga0232122_10163244 100Ga0208547_11701151 101Ga0247607_10721461 102Ga0247571_11672321
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102 1BBAY94_100084916 2Ga0078893_100796112 3Ga0075476_103358851 4Ga0160423_100511811 5Ga0182080_17853972 6Ga0181583_106221471 7Ga0181576_104637292 8Ga0181569_104699171 9Ga0181567_107027121
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78. 1Ga0255780_101071631 2BBAY94_100084916 3Ga0078893_100796112 4Ga0160423_108720711 5Ga0163109_100702754 6Ga0116813_10710032 7Ga0181571_103370491 8Ga0181571_109507852 9Ga0181576_103835132 10Ga0181576_104637292 11Ga0181576_105802491 12Ga0181569_103198572 13Ga0181569_104699171 14Ga0181569_111235691 15Ga0181567_104630952 16Ga0181567_107027121 17Ga0182065_10113051 18Ga0181574_106833652 19Ga0211488_100813132 20Ga0247571_11672321
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 34.58% β-sheet: 17.76% Coil/Unstructured: 47.66%
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Predicted 3D Structure

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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF00392	GntR	9.80
PF11353	DUF3153	7.84
PF00691	OmpA	6.86
PF13412	HTH_24	1.96
PF13463	HTH_27	0.98

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	3.92 %
Unclassified	root	N/A	96.08 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	1.96 %
Unclassified	root	N/A	96.08 %
Viruses	superkingdom	All Organisms → Viruses	1.96 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.96 %
Unclassified	root	N/A	96.08 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.98 %
Unclassified	root	N/A	96.08 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000949\|BBAY94_10008491	Not Available	2837	Open in IMG/M
3300000973\|BBAY93_10102850	Not Available	726	Open in IMG/M
3300005837\|Ga0078893_10079611	Not Available	1003	Open in IMG/M
3300006402\|Ga0075511_1002373	Not Available	1232	Open in IMG/M
3300006867\|Ga0075476_10335885	Not Available	525	Open in IMG/M
3300006874\|Ga0075475_10089290	Not Available	1402	Open in IMG/M
3300006874\|Ga0075475_10451345	Not Available	512	Open in IMG/M
3300008012\|Ga0075480_10171703	Not Available	1163	Open in IMG/M
3300008012\|Ga0075480_10333657	Not Available	761	Open in IMG/M
3300010296\|Ga0129348_1117443	Not Available	931	Open in IMG/M

Showing 1 to 10 of 102 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.04%
Host-Associated	Host-Associated	1.96%

Habitat	Taxonomy	Distribution
Algae	Host-Associated → Algae	1.96%
Aquatic	Environmental → Aquatic	98.04%

Habitat	Taxonomy	Distribution
Green Algae	Host-Associated → Algae → Green Algae	1.96%
Marine	Environmental → Aquatic → Marine	98.04%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	18.63%
Ectosymbionts	Host-Associated → Algae → Green Algae → Ectosymbionts	1.96%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	73.53%
Oceanic	Environmental → Aquatic → Marine → Oceanic	4.90%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	3.92%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	73.53%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	18.63%
Unclassified	Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified	1.96%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	0.98%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	9.80%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	2.94%
Macroalgal Surface	Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface	1.96%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	0.98%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	0.98%
Marine Surface Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water	0.98%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	73.53%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	4.90%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	3.92%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000949	Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY94	Host-Associated	Open in IMG/M
3300000973	Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY93	Host-Associated	Open in IMG/M
3300005837	Exploring phylogenetic diversity in Port Hacking ocean in Sydney, Australia - Port Hacking PH4 TJ4-TJ18	Environmental	Open in IMG/M
3300006402	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006867	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNA	Environmental	Open in IMG/M
3300006874	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNA	Environmental	Open in IMG/M
3300008012	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNA	Environmental	Open in IMG/M
3300010296	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNA	Environmental	Open in IMG/M
3300010297	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_DNA	Environmental	Open in IMG/M
3300010299	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_DNA	Environmental	Open in IMG/M

Showing 1 to 10 of 71 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
BBAY94_100084916	3300000949	Macroalgal Surface	MKHDFNLLLSNLKIALSCKTVSICVLMTLLLSGCYSNTAQYFGNATDTSMKMEHSTTILNAETQQLSESMVKNLSEVNFEYEVVTTQ*
BBAY93_101028501	3300000973	Macroalgal Surface	MKHDFNLLLNNLKIALSCKTVSICVLMTLLLSGCYSNTAKYFGNATDTSMKMEHNTTILSAETQQLSGSTVKSLSEVNFEYEVV
Ga0078893_100796112	3300005837	Marine Surface Water	MGKLQTALSCKTMAACVLLTLLFSGCYSNTAQYSNNAPDKSMKMEHYTTILNAETQQLVDSMVESLPEVNFEYELITPQ*
Ga0075511_10023733	3300006402	Aqueous	GKLQIALSCKTVTVCVFLTLLLSGCYSNTAQYFGNATDTSMKMEHNTTILNAETQQLLESMVKSLSEVNFEYEVITTQ*
Ga0075476_103358851	3300006867	Aqueous	MKKLQNAWGCTSVSICVLLTPLLSGCYSATAQYSGNATDKSMKMEHSTTILNPETEQLLQSMVKSLAEVNFEYEVIT
Ga0075475_100892902	3300006874	Aqueous	MKKLQNAWGCTSVSICVLLTPLLSGCYSATAQYSGNATDKSMKMEHSTTILNPETEQLLQSMVKSLAEVNFEYEVITAQ*
Ga0075475_104513451	3300006874	Aqueous	MGKLQIALSCKTVTICALLTLLLSGCYSNTAQYFGNATDTSMKMEHNTTILNAETQQLLESMVKSLSEVNFEYEVITTQ*
Ga0075480_101717032	3300008012	Aqueous	MGKLQIALSCKTVTVCVFLTLLLSGCYSNTAQYFGNATDTSMKMEHNTTILNAETQQILESMAKSLSEVNFEYEVITTQ*
Ga0075480_103336571	3300008012	Aqueous	MKKLQNAWGCTSVSICVLLTPLLSGCYSATAQYSGNATDKSMKMEHSTTILNPETEQLLQSMVK
Ga0129348_11174432	3300010296	Freshwater To Marine Saline Gradient	MGKLQIALSCKTVTVCVFLTLLLSGCYSNTAQYFGNATDTSMKMEHNTTILNAETQQLLESMVKSLSEVNFAYEVITTQ*
Ga0129345_10739811	3300010297	Freshwater To Marine Saline Gradient	MGKLQIALSCKTVTVCVFLTLLLSGCYSNTAQYFGNATDTSMKMEHNTTILNAETQQLLESMVKSLSEVNFEYEVITTQ*
Ga0129342_12405831	3300010299	Freshwater To Marine Saline Gradient	MGKLKIALSYKTVTVCVFLTLLLSGCYSNTAQYFGNATDTSMKMEHNTTILNAETQQLLESMVKSLSEVNFAYEVITTQ*
Ga0129349_12875601	3300012518	Aqueous	MGKLQTALSCKTMAACVLLTLLFSGCYSNTAQYSNNAPDKSMKMEHYTTILNGETQQLVDSMVESLPEVNFEYELITPQ*
Ga0129353_14499802	3300012525	Aqueous	MGKLQTALGCKTMAACVLLTLLFSGCYSNTAQYSNNAPDKSMKMEHYTTILNAETQQLVDSMVESLPEVNFEYELITPQ*
Ga0129352_108336791	3300012528	Aqueous	MGKLQTALSCKTMAACVLLTLLFSGCYSNTAQYSNNAPDKSMKMEHYTTILNAETQQLADSMVESLPEVNFEYELITPQ*
Ga0160423_100511811	3300012920	Surface Seawater	MGKVQIALSCKTVSTCVLLTLLLSGCYLNTAPDESMKMKHYTTILNAETQQILESMVKSLSEVNFEYEHITTQ*
Ga0160423_108720711	3300012920	Surface Seawater	MGRLQIALSCKTGTMCVLLTLLLSGCYSNTSPDKSMKMTHHTTILNAETQQLLDSMVVSLPEVNFKYELITTQ*
Ga0163109_100702754	3300012936	Surface Seawater	MGKLQIALRCKTVSTYVLLSSLLSGCYSNTAPDKSMKMKHHTTILNAETQQHLDSMVKSLPEVNFEYELITTQ*
Ga0163109_103073492	3300012936	Surface Seawater	MGKVQIALSCKTVSTCVLLTLLLSGCYLNTAPDKSMKMKHYTTILNAETQQILESMVKSLSEVNFEYEHITTQ*
Ga0116813_10710032	3300013253	Marine	MGKLQIALSCKTFSTYILLSLLLSGCYSNTAPDKSMKMTHHTTILNAETQQLSDSMVVSLPEVNFEYELITTQ*
Ga0182057_10381451	3300016732	Salt Marsh	MKNLQIALGCKTVSICVLLTLLLSGCYSATAQYSGNATDKSIKMEHNTTILNAETQQLSESMVKNLAEVNFEYEVITTQ
Ga0182092_10251963	3300016734	Salt Marsh	MGKLQTALGCKTMAACVLLTLLFSGCYSNTAQYSNNAPDKSMKMEHYTTILNAETQQLADSMVESLPEVNFEYELITPQ
Ga0182052_11159071	3300016742	Salt Marsh	MAACVLLTLLFSGCYSNTAQYSNNAPDKSMKMEHYTTILNAETQQLVDSMVESLPEVNFEYELITPQ
Ga0182062_13057682	3300016751	Salt Marsh	MKKLQNAWGCTSVSICVLLTPLLSGCYSATAQYSGNATDKSIKMEHNTTILNPETQQLLESMVKSLAEVNFEYEVITTQ
Ga0182080_17853972	3300016787	Salt Marsh	LLTLLLSGCYSNTAQYFGNATDTSMKMEHNTTILNAETQQLLESMVKSLSEVNFEYEVITTQ
Ga0181565_103929851	3300017818	Salt Marsh	MKKLQNAWGCTSVSICVLLTPLLSGCYSATAQYSGNATDKSMKMEHSTTILNPETEQLLESMVKSLAEVNFEYEVITAQ
Ga0181565_105128111	3300017818	Salt Marsh	MGKLQIALSCKTASTCVLLTFLLSGCSSNTALDKSMKMKHHTTILNAETQQLVDSMVENLPEVNFEYELITTQ
Ga0181565_107021072	3300017818	Salt Marsh	MKNLQIALGCKTVSICVLLTLLLSGCYSATAQYSGNATDKSIKMEHNTTILNPETQQLLESMVKTLAEVNFEYEVITTQ
Ga0181565_107385881	3300017818	Salt Marsh	MKNLQIALGCKTVSICVLLTLLLSGCYSATAQYFGNATDTSMKMEHNTTILNPETQQLVESMVKSLAEVNFEYEVITTQ
Ga0181552_100487324	3300017824	Salt Marsh	MGKLQTALGCKTMAACVLLTLLFSGCYSNTAQYSNNAPDKSMKMEHYTTILNAETQQLVDSMVESLPEVNFEYELITPQ
Ga0181552_100619424	3300017824	Salt Marsh	MGKLQIAFSCKTVTVCVLLILLLSGCYSNTAQYFGNATDTSMKMEHNTTILNAETQQLLESMVKSLSEVNFEYEVITTQ
Ga0181607_100361306	3300017950	Salt Marsh	MGKLQTALSCKTMAACVLLTLLFSGCYSNTAQYSNNAFDKSMKMEHYTTILNAETQQLVDSMVESLPEVNFEYELITPQ
Ga0181607_103056822	3300017950	Salt Marsh	MGKLQIALSCKTVTVCVFLTLLLSGCYSNTAQYFGNATDTSMKMEHNTTILNAETQQLLESMVKSLSEVNFEYEVITTQ
Ga0181577_102983192	3300017951	Salt Marsh	MKNLQIALGCKTVSICVLLTLLLSGCYSATAQYSGNATDKSIKMEHNTTILNPETQQLVESMVKSLAEVNFEYEVITTQ
Ga0181577_103156131	3300017951	Salt Marsh	MRKLQIALSCKTVSICVLLTLLLSGCYSNTAQYFGNATDTSMKMEHNTTILNAETQQLLESMVKSLSEVNFMYEVITTQ
Ga0181577_103434901	3300017951	Salt Marsh	MKKLQNAWGCTSVSICVLLTLLLSGCYSTTAQYSGNATDKSIKMEHNTTILNPETQQLLESMVKSLAEVNFEYEVITAQ
Ga0181583_106221471	3300017952	Salt Marsh	MGKLQIAFSCKTVTVCVLLILLLSGCYSNTAQYFGNATDTSMKMEHNTTILNAETQQLLESMVKSLSEVNFE
Ga0181583_107496421	3300017952	Salt Marsh	MGKLQIALSCKTVTICALLTLLLSGCYSNTAQYFSNATDTSMKMEHNTTILNAETQQLLESMVKSLSEVN
Ga0181583_109190421	3300017952	Salt Marsh	MGKLQIALSCKTVTVCVFLTLLLSGCYSNTAQYFGNATDTSMKMEHNTTILNAETQQLLESTVKSLSEVSFEYEVITTQ
Ga0181571_101097442	3300017957	Salt Marsh	MKKLQNAWGCTSVSICVLLTPLLSGCYSATAQYSGNATDKSMIMEHITTILNPETEHLLESMVKSLAEVNFEYEVITAQ
Ga0181571_103370491	3300017957	Salt Marsh	MNGKMQIALTCKTVSTCVLLTLLLSGCYSNTAPDESMKMTHHTTILSAETQRLLDSMVVSLPEVSFEYELITTQ
Ga0181571_104364211	3300017957	Salt Marsh	MGKLQIELSCKTVSKCVLLTLLLSGCYSNTAPDESMKMTHHTTILSAETQQLLDSMVVSLPEVNFKYELITTQ
Ga0181571_109507852	3300017957	Salt Marsh	MRKLHIALSCKTVSICVLLTLLLSGCYSNTAQYFGNATDTSMKMEHNTTILNGETQHLLESMVKSLSEVNFAYEVITTQ
Ga0181581_106511021	3300017962	Salt Marsh	MGKLQIAFSCKTVTVCVLLILLLSGCYSNTAQYFGNATDTSMKMEHNTTILNAETQQLLESMVKSLSEVNFEYEVIT
Ga0181589_106434831	3300017964	Salt Marsh	MKKLQNAWGCTSVSICVLLTPLLSGCYSATAQYSGNATDKSMIMEHSTTILNPETEQLLESMVKSLAEVNFEYEVITAQ
Ga0181576_102607281	3300017985	Salt Marsh	MGKLQIAFSCKTVTVCVLLILLLSGCYSNTAQYFGNATDISMKMEHNTTILNAETQQLLESMVKSLSEVNFEYEVITTQ
Ga0181576_103835132	3300017985	Salt Marsh	MGKLQIALSCKTVSTCMLLTLLLSGCYSNTAPDESMKMTHHTTILSAETQQLVDSMVVSLPEVNFKYELITTQ
Ga0181576_104637292	3300017985	Salt Marsh	MITIENVRRLPHSFSVRLRQMGKLQIELSCKTVSKCVLLTLLLSGCYSNTVPDKSMKMKHHTIILNAETQQLLDSMVESLPEVNFEYELITTQ
Ga0181576_105802491	3300017985	Salt Marsh	MKNLQIALGCKTVSICVLLTLLLSGCYSATAQYSGNATDKSIKMEHNTTILNPETQQLLDSMVKRLAEVNFEYEVITTQ
Ga0181569_101429834	3300017986	Salt Marsh	MGKLQIALTCKTVSTCVLLTLLLSGCYSNTAPDESMKMTHHTTILSAETQQLLDSMVVSLPEVNFKYELITTK
Ga0181569_103198572	3300017986	Salt Marsh	MKKLQNAWGCTSVSICVLLTPPLSGCYSATAQYSGNATDKSMKMEHSTTILNPETEQLLESMVKSLAEVNFEYEVITAQ
Ga0181569_104699171	3300017986	Salt Marsh	MGNLQIALSCKTGSMCVLLTLLLSGCYSNTAQYSGNAPDTSMKMKHHTTVLNAETQQLLESMVRTLSQVNFEYEVINTQ
Ga0181569_105399532	3300017986	Salt Marsh	MGKLQIALSCKTVTVCVFLTLLLSGCYSNTAQYFGNANDTSIKMEHNTTILNAETQQLLESMVKSLSEVNFEYEVITTQMRY
Ga0181569_110256971	3300017986	Salt Marsh	MGKLQIELSCKTVSKCVLLTLLLSGCYSNTVPDKSMKMKHHTIILNAETQQLLDSMVESLPEVNFEYELITTQ
Ga0181569_111235691	3300017986	Salt Marsh	MKKLQIALGCKTVSICVLLTLLLSGCYSTTAQYFGNPTDTSMKMEHNTTILNAETQQLLESMVKSLAEVNFEYEVITTQ
Ga0181600_101328543	3300018036	Salt Marsh	MGKLQTALSCKTMAACVLLTLLFSGCYSNTAQYSNNAPDKSMKMEHYTIILNAETQQLVDSMVESLPEVNFEYELITPQ
Ga0181606_102735902	3300018048	Salt Marsh	MKHDFNLLLSNSKIALSCKTVSICVLMTLLLSGCYSNTAQYFGNATDTSMKMEHSTTILNAETQQLSESMVKNLSEVNFEYEVVTTQ
Ga0181561_102400232	3300018410	Salt Marsh	CKTMAACVLLTLLFSGCYSNTAQYSNNAPDKSMKMEHYTTILNAETQQLVDSMVESLPEVNFEYELITPQ
Ga0181558_104429991	3300018417	Salt Marsh	MGKLQIALSCKTVTVCVFLTLLLSGCYSNTAQYFSNATDTSMKMEHNTTILNAETQQLLESMVKSLSEVNFEYEVITTQ
Ga0181567_104630952	3300018418	Salt Marsh	MGKLQIALSCKTVSMCVLMTLLLSGCYSNTASNKSMKMKHHTTILNAETEQLVDSMVESLPEVNFEYELITTQ
Ga0181567_107027121	3300018418	Salt Marsh	HSFKVRVRQMRKLQIALSCKTVTMCVLLALLLSGCYSNTAPDEYMKMTHHTTILSAETQQLLDSMVVSLPEVNFEYELITTQ
Ga0181591_103544572	3300018424	Salt Marsh	MGKLQIALSCKTVTICALLTLLLSGCYSNTAQYFSNATDTSMKMEHNTTILNAETQQLLESMVKSLSEVNFEYEVITTQ
Ga0181566_101886832	3300018426	Salt Marsh	MGKLQIALTCKTVSACVLLTLLLSGCYSNTAPDESMKMTHHTTILSAETQQLLDSMVVSLPEVNFKYELITTK
Ga0181568_107351232	3300018428	Salt Marsh	MGKLQIALSCKTVSTCVILTILLSGCYLNTAPDKSMKMRHHTTILNAETRQILESMAKSLSEVNFK
Ga0181564_101121253	3300018876	Salt Marsh	MGKLQTALSCKTMAACVLLTLLFSGCYSNTAQYSNSAPDKSMKMEHYTTILNAETQQLVDSMVESFPEVNFEYELITPQ
Ga0181564_102789822	3300018876	Salt Marsh	MGKLQIAFSCKTVTVCVLLILLLSGCYSNTAQYFGNATDTSMKMEHNTTILNAETQQLLEPMVKSLSEVNFEYEVITTQ
Ga0182064_12168331	3300019253	Salt Marsh	QMKNLQIALGCKTVSICVLLTLPLSGCYSATAQYSGNATDKSIKMEHNTTILNPETQKLVDSMVKSLAEVNFEYEVITAQ
Ga0182066_10687021	3300019262	Salt Marsh	MGKLQIALSCKTVSTCVILTMLLSGCYLNTAPDKSMKMRHHTTILNAETRQILESMAKSLSEVNFEYE
Ga0182061_11722581	3300019266	Salt Marsh	MKNLQIALGCKTFSICVLLTLLLSGCYSATAQYSGNATDKSIKMEHNTTILNPETQQLLESMVKTLAEVNFEYEVITTQ
Ga0182069_13394751	3300019267	Salt Marsh	KLQIALSCKTVLICVLLTLLLSGCYSNTAQYFGNATDTSMKMEHNTTILNAETQQLLESMVKSLSEVNFEYEVITTQ
Ga0182065_10113051	3300019271	Salt Marsh	MGKLRIALSYKTVTVCVFLTLLLSGCYSNTAQYFGNATDTSKKMEHNTTILNAETQQILESIAKSLSEVNFEY
Ga0182059_14269571	3300019272	Salt Marsh	MKKLQNAWGCTSVSICVLLTPPLSGCYSATAQYSGNATDKSIKMEHNTTILNPETQQLLESMVKTLAEVNFEYEVITTQ
Ga0182073_12878402	3300019274	Salt Marsh	WGCTSVSICVLLTPLLSGCYSATAQYSGNATDKSMKMEHSTTILNPETEQLLESMVKSLAEVNFEYEVITAQ
Ga0182075_16052861	3300019282	Salt Marsh	MGKSQIALSCKTVTVCVLLTLLLSGCYSNTAQYFGNATDTSMKMEHNTTILNAETQQLLESMVKSLSEVNFEYEVITTQ
Ga0181562_100771191	3300019459	Salt Marsh	MGKLQTALGCKTMAACVLLTLLFSGCYSNTAQYSNNAPDKSMKMEHYTTILNAETQQLVDSMVESFPEVNFEYELITPQ
Ga0181562_103407131	3300019459	Salt Marsh	MGKLQIALSCKTVTVCVFLTLLLSGCYSNTAQYFGNATDTSMKMEHNTTILNAETQQLLEPMVKSLSEVNFEYEVITTQ
Ga0181574_106833652	3300020056	Salt Marsh	MGKLQIALSCKTVSTCVLLTSLLSGCSSNTALDKSMKMKHHTTILNAETQQLVDSMVENLPEVNFEYELITTQ
Ga0181578_104349601	3300020189	Salt Marsh	MGKLQIALSCKTVTVCVFLTLLLSGCYSNTAQYFGNATDTSMKMEHNTTILNAETQQLLESMVK
Ga0181604_104662412	3300020191	Salt Marsh	FSCKTVTVCVLLILLLSGCYSNTAQYFGNATDTSMKMEHNTTILNAETQQLLESMVKSLSEVNFEYEVITTQ
Ga0211488_100813132	3300020362	Marine	MGKLQISLSCKTVSTCVLLTLLLSGCYLNTAPDKSMKMRHHTTILNAETRQILESMAKSLSEVNFEYEHITTQ
Ga0213867_10794491	3300021335	Seawater	GCKTMAACVLLTLLFSGCYSNTAQYSNNAPDKSMKMEHYTTILNAETQQLVDSMVESLPEVNFEYELITPQ
Ga0213860_102073852	3300021368	Seawater	MEKLQTALSCKTMAACVLLTLLFSGCYSNTAQYSNNAPDKSMKMEHYTTILNAETQQLVDSMVESLPEVNFEYELITPQ
Ga0213866_102778252	3300021425	Seawater	LLTLLFSGCYSNTAQYSNNAPDKSMKMEHYTTILNAETQQLVDSMVESLPEVNFEYELITPQ
Ga0255783_101054191	3300022923	Salt Marsh	CKTVTVCVLLILLLSGCYSNTAQYFGNATDTSMKMEHNTTILNAETQQLLESMVKSLSEVNFEYEVITTQ
Ga0255781_103738282	3300022934	Salt Marsh	TVCVLLTLLLSGCYSNTAQYFGNATDTSMKMEHNTTILNAETQQLVESMVKSLSEVNFAYEVITTQ
Ga0255780_101071631	3300022935	Salt Marsh	MGKLQIAFSCKTVTVCVLLTLLLSGCYSNTAQYFGNATDTSMKMEHNTTILNAETQQLLESMVKSLSEVNFEYEVITTQ
Ga0255754_105216411	3300022939	Salt Marsh	MGKLQIAFSCKTVTVCVLLILLLSGCYSNTAQYFGNATDISMKMEHNTTILNAETQQLLESM
Ga0255782_101290403	3300023105	Salt Marsh	ALSCKTVTVCVFLTLLLSGCYSNTAQYFGNATDTSMKMEHNTTILNAETQQLLESMVKSLSEVNFEYEVITTQ
Ga0255782_102490911	3300023105	Salt Marsh	MKKLQNAWGCTSVSICVLLTPPLSGCYSATAQYSGNATDKSMIMEHSTTILNPETEQLLESMVKSLAEVNFEYEVITAQ
Ga0255743_102514111	3300023110	Salt Marsh	MGKLQIALSCKTVTVCVFLTLLLSGCYSNTAQYFGNANDTSIKMEHNTTILNAETQQLLESMVKSLSEVNFEYEVITTQ
Ga0255743_103306232	3300023110	Salt Marsh	KLQNAWGCTSVSICVLLTPLLSGCYSATAQYSGNATDKSMIMEHSTTILNPETEQLLESMVKSLAEVNFEYEVITAQ
Ga0255743_103964941	3300023110	Salt Marsh	MKNLQIALGCKTVSICVLLTLLLSGCYSATAQYSGNATDKSIKMEHNTTILNPETQQLVETMVKSLAEVNFEYEVITTQ
Ga0255743_104163301	3300023110	Salt Marsh	MKKLQIALGCKTVSICVLLTLLLSGCYSTTAQYFGNPTDTSMKMEHNTTILNAETQQLLESMVKSLSEVNFEYEVITTQ
Ga0255751_102378282	3300023116	Salt Marsh	MGKLQIALSCKTVTICGLLTLLLSGCYSNTAQYFSNATDTSMKMEHNTTILNAETQQLLESMVKSLSEVNFEYEVITTQ
Ga0255762_101650631	3300023119	Salt Marsh	MKNLQIALGCKTVSICVLLTLLLSGCYSATAQYSGNATDKSIKMEHNTTILNPETQQLLESMVKSLAEVNFEYEVITTQ
Ga0255777_105447821	3300023175	Salt Marsh	MKKLQNAWGCTSVSICVLLTPLLSGCYSATAQYSGNATDKSMIMEHSTTILNPETEQLL
Ga0255759_106978031	3300023178	Salt Marsh	MGKLQIAFSCKTVTVCVLLILLLSGCYSNTAQYFGNATDTSMKMEHNTTILNAETQQLLESMVK
Ga0255763_11890902	3300023273	Salt Marsh	ALGCKTMAACVLLTLLFSGCYSNTAQYSNNAPDKSMKMEHYTTILNAETQQLVDSMVESLPEVNFEYELITPQ
Ga0232122_10163244	3300023709	Salt Marsh	MGKLQTALSCKTMAACVLLTLLFSGCYSNTAQYSNNAPDKSMKMEHYTTILNAETQQLVDSMVESLPEVNFEYELITP
Ga0208547_11701151	3300025828	Aqueous	MKKLQNAWGCTSVSICVLLTPLLSGCYSATAQYSGNATDKSMKMEHSTTILNPETEQLLQSMVKSLAEVNFEYEVITAQ
Ga0247607_10721461	3300026447	Seawater	MRELQIALSCKTVLTCVLLTLLLTGCYSNTAQYSSNASDKSMKMRHHTTILNAETQQLVESMVENLSEVNFEYELITTQ
Ga0247571_11672321	3300026495	Seawater	MRSLHIALSCKTFSTCVLLTLLLTGCYSNTAQYSSNASDKSMKMRHHTTILNAETQQLVGSMVESLSEVNFEYELITTQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters