Metagenome / Metatranscriptome Family F101198

Basic Information
Family ID	F101198
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	82 residues
Representative Sequence	VAQEQGDGDQPWELAGGHTGDGADESIEFVSDVEFVEESGDEAARPPETVGTIGEFLQNVAAVVLSPVLDLDALRRPGARL
Number of Associated Samples	98
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	78.43 %
% of genes near scaffold ends (potentially truncated)	45.10 %
% of genes from short scaffolds (< 2000 bps)	89.22 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil (28.431 % of family members)
Environment Ontology (ENVO)	Unclassified (49.020 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Subsurface (non-saline) (36.275 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 17.28% β-sheet: 11.11% Coil/Unstructured: 71.60%
Feature Viewer

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Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF04002	RadC	37.25
PF06067	DUF932	6.86
PF16793	RepB_primase	1.96
PF12728	HTH_17	0.98
PF00589	Phage_integrase	0.98
PF00355	Rieske	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG2003	DNA repair protein RadC, contains a helix-hairpin-helix DNA-binding motif	Replication, recombination and repair [L]	37.25

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	84.31 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.98 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	81.37 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.98 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium SCN 69-37	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	76.47 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.98 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003994\|Ga0055435_10272326	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	502	Open in IMG/M
3300004019\|Ga0055439_10094480	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	879	Open in IMG/M
3300004479\|Ga0062595_101325379	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	650	Open in IMG/M
3300004480\|Ga0062592_100437537	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	1056	Open in IMG/M
3300005364\|Ga0070673_101323134	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	677	Open in IMG/M
3300005544\|Ga0070686_101035887	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	675	Open in IMG/M
3300005544\|Ga0070686_101227119	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	624	Open in IMG/M
3300005833\|Ga0074472_10240412	All Organisms → cellular organisms → Bacteria	1423	Open in IMG/M
3300005836\|Ga0074470_11739968	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	810	Open in IMG/M
3300005890\|Ga0075285_1052118	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	551	Open in IMG/M
3300006417\|Ga0069787_11660280	All Organisms → cellular organisms → Bacteria → Proteobacteria	1187	Open in IMG/M
3300009078\|Ga0105106_10980410	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300009098\|Ga0105245_11227043	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	798	Open in IMG/M
3300009100\|Ga0075418_12893470	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	524	Open in IMG/M
3300009147\|Ga0114129_12179873	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	667	Open in IMG/M
3300009553\|Ga0105249_13349752	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	516	Open in IMG/M
3300009597\|Ga0105259_1007826	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	2044	Open in IMG/M
3300009678\|Ga0105252_10078865	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	1292	Open in IMG/M
3300009801\|Ga0105056_1041412	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	625	Open in IMG/M
3300009804\|Ga0105063_1010330	All Organisms → cellular organisms → Bacteria → Acidobacteria	982	Open in IMG/M
3300009811\|Ga0105084_1052970	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	721	Open in IMG/M
3300009816\|Ga0105076_1008802	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	1685	Open in IMG/M
3300009873\|Ga0131077_10297951	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	1606	Open in IMG/M
3300010166\|Ga0126306_10184888	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	1567	Open in IMG/M
3300010371\|Ga0134125_12137042	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	609	Open in IMG/M
3300010391\|Ga0136847_12239453	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	628	Open in IMG/M
3300011106\|Ga0151489_1273663	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300011405\|Ga0137340_1037067	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	917	Open in IMG/M
3300011409\|Ga0137323_1032600	All Organisms → cellular organisms → Bacteria	1150	Open in IMG/M
3300011416\|Ga0137422_1012590	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	1956	Open in IMG/M
3300011429\|Ga0137455_1029814	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	1506	Open in IMG/M
3300011432\|Ga0137428_1091540	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	854	Open in IMG/M
3300011437\|Ga0137429_1010143	All Organisms → cellular organisms → Bacteria	2695	Open in IMG/M
3300011438\|Ga0137451_1041111	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	1349	Open in IMG/M
3300011439\|Ga0137432_1002858	All Organisms → cellular organisms → Bacteria	4879	Open in IMG/M
3300011440\|Ga0137433_1004794	All Organisms → cellular organisms → Bacteria	4479	Open in IMG/M
3300012021\|Ga0120192_10017771	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	1096	Open in IMG/M
3300012022\|Ga0120191_10174009	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	509	Open in IMG/M
3300012038\|Ga0137431_1007181	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	3115	Open in IMG/M
3300012159\|Ga0137344_1058235	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	695	Open in IMG/M
3300012166\|Ga0137350_1023558	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	1150	Open in IMG/M
3300012167\|Ga0137319_1013489	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	1683	Open in IMG/M
3300012174\|Ga0137338_1008782	All Organisms → cellular organisms → Bacteria	1840	Open in IMG/M
3300012175\|Ga0137321_1011035	All Organisms → cellular organisms → Bacteria	1771	Open in IMG/M
3300012179\|Ga0137334_1009894	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	1766	Open in IMG/M
3300012231\|Ga0137465_1002601	All Organisms → cellular organisms → Bacteria	5209	Open in IMG/M
3300012353\|Ga0137367_10462214	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300012355\|Ga0137369_10182426	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	1639	Open in IMG/M
3300012519\|Ga0157352_1027232	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	735	Open in IMG/M
3300012893\|Ga0157284_10095306	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	768	Open in IMG/M
3300012909\|Ga0157290_10092979	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	876	Open in IMG/M
3300012922\|Ga0137394_10870445	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	753	Open in IMG/M
3300012957\|Ga0164303_11170874	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	560	Open in IMG/M
3300012960\|Ga0164301_10978521	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	663	Open in IMG/M
3300012987\|Ga0164307_10608781	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	843	Open in IMG/M
3300013306\|Ga0163162_12857743	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	556	Open in IMG/M
3300013308\|Ga0157375_10488239	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	1396	Open in IMG/M
3300014255\|Ga0075320_1041338	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	809	Open in IMG/M
3300014270\|Ga0075325_1173062	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	561	Open in IMG/M
3300014299\|Ga0075303_1090333	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	582	Open in IMG/M
3300014302\|Ga0075310_1039608	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	899	Open in IMG/M
3300014325\|Ga0163163_11579212	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	717	Open in IMG/M
3300014865\|Ga0180078_1000960	All Organisms → cellular organisms → Bacteria	3245	Open in IMG/M
3300014866\|Ga0180090_1073349	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	607	Open in IMG/M
3300014875\|Ga0180083_1005627	All Organisms → cellular organisms → Bacteria → Acidobacteria	1979	Open in IMG/M
3300014876\|Ga0180064_1005567	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	2566	Open in IMG/M
3300014880\|Ga0180082_1006717	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	2274	Open in IMG/M
3300014885\|Ga0180063_1279418	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	531	Open in IMG/M
3300015249\|Ga0180071_1008146	All Organisms → cellular organisms → Bacteria	1125	Open in IMG/M
3300015253\|Ga0180081_1046535	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	735	Open in IMG/M
3300015255\|Ga0180077_1007004	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	1783	Open in IMG/M
3300015256\|Ga0180073_1034215	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	996	Open in IMG/M
3300015372\|Ga0132256_100914555	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	993	Open in IMG/M
3300017966\|Ga0187776_11223858	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	564	Open in IMG/M
3300018053\|Ga0184626_10153528	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	979	Open in IMG/M
3300018075\|Ga0184632_10417886	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	561	Open in IMG/M
3300018429\|Ga0190272_11247936	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	734	Open in IMG/M
3300018469\|Ga0190270_11640919	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	695	Open in IMG/M
3300019377\|Ga0190264_10249648	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	1028	Open in IMG/M
3300019377\|Ga0190264_10637684	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	770	Open in IMG/M
3300020060\|Ga0193717_1086571	All Organisms → cellular organisms → Bacteria	1014	Open in IMG/M
3300025901\|Ga0207688_10812840	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	592	Open in IMG/M
3300025908\|Ga0207643_10285198	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	1025	Open in IMG/M
3300027209\|Ga0209875_1006443	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	1397	Open in IMG/M
3300027866\|Ga0209813_10346851	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	587	Open in IMG/M
3300028803\|Ga0307281_10078166	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	1084	Open in IMG/M
3300030620\|Ga0302046_10435028	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	1077	Open in IMG/M
3300031184\|Ga0307499_10180548	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	638	Open in IMG/M
3300031226\|Ga0307497_10261889	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	777	Open in IMG/M
(restricted) 3300031248\|Ga0255312_1054231	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	961	Open in IMG/M
3300031562\|Ga0310886_10350524	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	858	Open in IMG/M
3300031562\|Ga0310886_10455201	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	764	Open in IMG/M
3300031943\|Ga0310885_10041151	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	1869	Open in IMG/M
3300032074\|Ga0308173_11602858	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	613	Open in IMG/M
3300032157\|Ga0315912_10013398	All Organisms → cellular organisms → Bacteria	6889	Open in IMG/M
3300032770\|Ga0335085_10375660	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	1658	Open in IMG/M
3300034075\|Ga0373895_054046	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300034075\|Ga0373895_058222	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	587	Open in IMG/M
3300034080\|Ga0373897_029480	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	991	Open in IMG/M
3300034128\|Ga0370490_0002079	All Organisms → cellular organisms → Bacteria → Acidobacteria	8334	Open in IMG/M
3300034257\|Ga0370495_0038970	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	1429	Open in IMG/M
3300034420\|Ga0373918_0208792	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	514	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	82.35%
Host-Associated	Host-Associated	11.76%
Engineered	Engineered	5.88%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	46.08%
Aquatic	Environmental → Aquatic	36.27%
Plants	Host-Associated → Plants	11.76%
Bioremediation	Engineered → Bioremediation	3.92%
Wastewater	Engineered → Wastewater	1.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	46.08%
Sediment	Environmental → Aquatic → Sediment	32.35%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.86%
Metal	Engineered → Bioremediation → Metal	3.92%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.94%
Freshwater	Environmental → Aquatic → Freshwater	1.96%
Marine	Environmental → Aquatic → Marine	1.96%
Roots	Host-Associated → Plants → Roots	1.96%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.98%
Nutrient Removal	Engineered → Wastewater → Nutrient Removal	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Sediment → Unclassified	32.35%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	29.41%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.82%
Sand	Environmental → Terrestrial → Soil → Sand	5.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.90%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	3.92%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.94%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.96%
Loam	Environmental → Terrestrial → Soil → Loam	1.96%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.96%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.98%
Lake	Environmental → Aquatic → Freshwater → Lake	0.98%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.98%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.98%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.98%
Biological Phosphorus Removal	Engineered → Wastewater → Nutrient Removal → Biological Phosphorus Removal	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	32.35%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.53%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.82%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	5.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.90%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.92%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	3.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.94%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.96%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.96%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.98%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.98%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.98%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.98%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.98%
Activated Sludge	Engineered → Wastewater → Nutrient Removal → Biological Phosphorus Removal → Activated Sludge	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	28.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.71%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	4.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.92%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	3.92%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	3.92%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.94%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.96%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	1.96%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.96%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.96%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.96%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.96%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.96%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.98%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.98%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.98%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.98%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.98%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.98%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.98%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.98%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.98%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.98%
Wastewater	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater	0.98%
Enhanced Biological Phosphorus Removal Bioreactor	Engineered → Wastewater → Nutrient Removal → Biological Phosphorus Removal → Activated Sludge → Enhanced Biological Phosphorus Removal Bioreactor	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003994	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2	Environmental	Open in IMG/M
3300004019	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005833	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBK	Environmental	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300005890	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_104	Environmental	Open in IMG/M
3300006417	Combined Assembly of Gp0110018, Gp0110022, Gp0110020	Engineered	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009597	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT299	Environmental	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300009801	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30	Environmental	Open in IMG/M
3300009804	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_30_40	Environmental	Open in IMG/M
3300009811	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30	Environmental	Open in IMG/M
3300009816	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10	Environmental	Open in IMG/M
3300009873	Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Wenshan plant	Engineered	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011405	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT400_2	Environmental	Open in IMG/M
3300011409	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT423_2	Environmental	Open in IMG/M
3300011416	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT551_2	Environmental	Open in IMG/M
3300011429	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT600_2	Environmental	Open in IMG/M
3300011432	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT718_2	Environmental	Open in IMG/M
3300011437	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT736_2	Environmental	Open in IMG/M
3300011438	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT500_2	Environmental	Open in IMG/M
3300011439	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2	Environmental	Open in IMG/M
3300011440	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT840_2	Environmental	Open in IMG/M
3300012021	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T1	Environmental	Open in IMG/M
3300012022	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C6	Environmental	Open in IMG/M
3300012038	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT800_2	Environmental	Open in IMG/M
3300012159	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT500_2	Environmental	Open in IMG/M
3300012166	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT660_2	Environmental	Open in IMG/M
3300012167	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT333_2	Environmental	Open in IMG/M
3300012174	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT366_2	Environmental	Open in IMG/M
3300012175	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT399_2	Environmental	Open in IMG/M
3300012179	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT262_2	Environmental	Open in IMG/M
3300012231	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT828_2	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012519	Unplanted soil (control) microbial communities from North Carolina - M.Soil.7.yng.070610	Environmental	Open in IMG/M
3300012893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1	Environmental	Open in IMG/M
3300012909	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014255	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleC_D2	Environmental	Open in IMG/M
3300014270	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D1	Environmental	Open in IMG/M
3300014299	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D1	Environmental	Open in IMG/M
3300014302	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D2	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014865	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT499_16_10D	Environmental	Open in IMG/M
3300014866	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT890_16_10D	Environmental	Open in IMG/M
3300014875	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_1_16_10D	Environmental	Open in IMG/M
3300014876	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200_16_10D	Environmental	Open in IMG/M
3300014880	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_16_10D	Environmental	Open in IMG/M
3300014885	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_10D	Environmental	Open in IMG/M
3300015249	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT293A_16_10D	Environmental	Open in IMG/M
3300015253	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT590_16_10D	Environmental	Open in IMG/M
3300015255	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT466_16_10D	Environmental	Open in IMG/M
3300015256	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT333_16_10D	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300020060	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c2	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027209	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027866	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes)	Host-Associated	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300030620	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031248 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_T0_E5	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300034075	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A4A4.2	Engineered	Open in IMG/M
3300034080	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A5A4.1	Engineered	Open in IMG/M
3300034128	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_06D_16	Environmental	Open in IMG/M
3300034257	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_02D_17	Environmental	Open in IMG/M
3300034420	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A1A4.1	Engineered	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0055435_102723261	3300003994	Natural And Restored Wetlands	MPCARQVVERPAVAQQQRDGDQPWVLADGHAGDRTDESIEFVSDVEFVEEGGDEPTRPREIVCVLRHLLKDSEAVTLSPVSSLDALRRPGAWLWFRD
Ga0055439_100944801	3300004019	Natural And Restored Wetlands	VAQEQGDGDQPWELAGGQTGDGADESIEFVSDVEFVEEGVDEPTRPREIACAIRHFLKDSEAVTLSPVSSLDALRRPGAWLWFRDS
Ga0062595_1013253791	3300004479	Soil	VAQEQGDGDQPWELTGGHTGDGADESIEFVSDVEFVEESGDEAARPPETVGTIGEFLQNVAAVVLSPVLDLDALRRPGARL*
Ga0062592_1004375371	3300004480	Soil	VAQEQSDGDQPWELAGGHTGDGADESIEFVSDVEFVEESVDEAARPPETVGTIGEFAQNVDAVVLSPVLDLDALWRPGAWL*
Ga0070673_1013231342	3300005364	Switchgrass Rhizosphere	VAQQQRDGDQPWVLADGHAGDRTDESIEFVSDVEFVEEGVDEPTRPREIACAIRHFLKDSEAVTLSPVSSLDALGRPGAWLWFRDS*
Ga0070686_1010358872	3300005544	Switchgrass Rhizosphere	MPCARQVVERPAVAQEQCDGDQPWVLADGHAGDRTDESIEFVSDVEFVEEGVDEPTRPREIVCVFRHLVKDSEAVTLSPVSSLDALRRPGAWL
Ga0070686_1012271191	3300005544	Switchgrass Rhizosphere	VRPAVAQEQSDGDQPWELAGGHTGDGADESIEFVSDVEFVEESGDEAARPPETVGTIGEFLQNVAAVVLSPVLDLDALRRPGARL*
Ga0074472_102404121	3300005833	Sediment (Intertidal)	LAGGHTGDGADKSIEFVSDMEFVEESGDEAARPLETVGTIGEFLQNVAAVVLSPVLDLDALRRPGARL*
Ga0074470_117399682	3300005836	Sediment (Intertidal)	VAQEQGDGDQPWELAGGQTGDGADESIEFVSDVEFVEESGDEAARPPETVGTIGEFLQNVAAVVLSPVLDLDALRRPGARL*
Ga0075285_10521182	3300005890	Rice Paddy Soil	MPCARQVVERPAVAQQQRDGDQPWVLADGHAGDRTDESIEFVSDVEFVEEGVDEPTRPRKIVSALRHLLKDSEAVTLSPVSS
Ga0069787_116602802	3300006417	Enhanced Biological Phosphorus Removal Bioreactor	VTEQQRDGDQPWELAGGHTGEGADESIEFVGDVEFVEEGGDEAARPPETVGTDREFLQNVAAVVESPVLDLDALRRPGVRL*
Ga0105106_109804102	3300009078	Freshwater Sediment	AQQQRDGDQPWELADGHAGDGTDESIEFVSDVEFVEESGDEAARPPETVGTIGEFLQNVAAVVLSPVLDLDALRRPGARL*
Ga0105245_112270432	3300009098	Miscanthus Rhizosphere	VAQEQGDGDQPWELAGGHTRDGADESIEFVSDVEFVEESGYEAARPTETVGTIGEFLQNVAAVVLSPVLDLDALRRPGARL*
Ga0075418_128934701	3300009100	Populus Rhizosphere	QPWELAGGYTGDGADESIEFVSDVEFVEESGDEAARPPETVGTIGEFLQNVAAVVLSPVLDLDALRRPGARL*
Ga0114129_121798732	3300009147	Populus Rhizosphere	ARQVVERPAVAQEQCDGDQPWELAGGHMGGGADESIEFVSDVEFVEESVDEAARPPETVGTIGEFAQNVDAVVLSPVLDLDALRRPGAWL*
Ga0105249_133497521	3300009553	Switchgrass Rhizosphere	VAQQQRDGDQPWVLADGHAGDRTDESIEFVSDVEFVEEGVDEPTRPREIVCVLRHLLKDSEAVTLSPVSGLDARRRPGAWLWFRDSLAGG
Ga0105259_10078262	3300009597	Soil	VAQEQGDGDQPWELAGGHTGDGADESIEFVSDVEFVEESGDEAARPPETVGTIGEFLQNVAAVVLSPVLDLDALRRPGARL*
Ga0105252_100788652	3300009678	Soil	VAQEQSDGDQPWELAGGHTGDGADESIEFVSDVEFVEESGDEAARPLETVGTIGEFLQNVAAVVLSPVLDLDALRRPGARL*
Ga0105056_10414122	3300009801	Groundwater Sand	VAQEQGDGDQPWELAGGHTGDGADESIEFVSDVEFVEESGDEAARPPETVGTLGEFLQNVAAVVLSPVLDLDALRRPGARL*
Ga0105063_10103302	3300009804	Groundwater Sand	VAAEGVEFCFQGTDPEPDALARARQVVERPAVAQEQGDGDQPWELADGHTGDGADESIEFVSDVEFVEESNDEAARPPETVGTIGEFLQNVAAVVLSPVLDLDALRRPGARL*
Ga0105084_10529701	3300009811	Groundwater Sand	VAQEQGDGDQPWELAGGHTGDGADESIEFVSDVEFVEESGDEAARPPETVGTIGEFVQNVAAVVLSPVLDLDALRRPGARL*
Ga0105076_10088022	3300009816	Groundwater Sand	VAQEQGDGDQPWELAGGHTGDGADESIEFVSDVEFVEESGDEATRPPETVGTIGEFLQNVAAVVLSPVLDLDALRRPGARL*
Ga0131077_102979512	3300009873	Wastewater	VAQEQSDGDQPWELAGGHTGDGADESIEFVSDVEFVEESGDEAARPPETVGTIGEFLQNVAAVVLSPVLDLDALRRPGARL*
Ga0126306_101848882	3300010166	Serpentine Soil	VAQEQGDGDQPWELAGGHTGDGADESIEFVSDVEFVEESGDEAARPLETVGTIGEFLQNVAAVVLSPVLDLDALRRPGARL*
Ga0134125_121370421	3300010371	Terrestrial Soil	ALARARQVVERPAVAQEHSDGDQPWELAGGHTGDGADESIEFVSDVEFVEESGDEAARPPETVGTIGEFLQNVAAVVLSPVLDLDALRRPGARL*
Ga0136847_122394531	3300010391	Freshwater Sediment	AQEQGDGDQPWELAGGHTGDGADESIEFVSDVEFVEESGDEAARPPETVGTIGEFLQNVAAVVLSPVLDLDALRRPGARL*
Ga0151489_12736631	3300011106	Soil	PWELAGGHTGDGADESIEFVIDVEFVEESGDEAARPPETVGTIGEFLQNVAAVVLSPVLDLDALRRPGARL*
Ga0137340_10370672	3300011405	Soil	VAQEQSNGDQPWELAGGHTGDGADESIEFVSDVEFVEESGDEAARPPETVGTIGEFLQNVAAVVLSPVLDLDALRRPGARL*
Ga0137323_10326001	3300011409	Soil	QVVVRPAVAQEQGDGDQPWELAGGHTGDGADESIEFVSDVEFVEEGVDEPTRPREIVSALRHLLKNGEAVTLSPVSSLDALRRPGARL*
Ga0137422_10125902	3300011416	Soil	VAQQQRDGDQPWVLADGHAGDRTDESIEFVSDVEFVEESGDEAARPPETVGTIGEFLQNVAAVVLSPVLDLDALRRPGARL*
Ga0137455_10298143	3300011429	Soil	VAQEQGDGDQPWELAGGHTGDGADESIEFVSDVEFVEESGDEAARPPETVGTIGEFLQNVAAVVLSPVLD
Ga0137428_10915402	3300011432	Soil	VAQEQGDGDQPWELAGGHTGDGADESIEFVSDVEFVEESGDEAARPPETVGTIGEFLQNVATVVLSPVLDLDALRRPGVRL*
Ga0137429_10101435	3300011437	Soil	VAQEQGDGDQPWELAGGHTGDGADESIEFVSDVEFVEESGDEAARPPETVGPIGEFLQNVAAVVLSPVLDLDALRRPGARL*
Ga0137451_10411111	3300011438	Soil	VAQAQGDGDQPWELAGGHTGDGADESIEFVSDVEFVEESGDEAARPPETVGTIGEFLQNVAAVVLSPVLDLDALRRPGARL*
Ga0137432_10028586	3300011439	Soil	EQGDGDQPWELAGGHTGDGADESIEFVSDVEFVEESGDEAARPPETVGTIGEFLQNVAAVVLSPVLDLDALRRPGARL*
Ga0137433_10047942	3300011440	Soil	VAQQQRDGDQPWELADGHAGDGTDESIEFVSDVEFVEESGDEAARPPETVGTIGEFLQNVAAVVLSPVLDLDALRRPGARL*
Ga0120192_100177712	3300012021	Terrestrial	VAQQQRDCDQPWVLADGHTSGGTEESIEFVSDVEFVEEGVDEPTRPREIVSALRHLLKDSEAVTLSPVSSLDALGRPGAWL*
Ga0120191_101740091	3300012022	Terrestrial	VAQQQRDGDQPRELADGHAGDGTDESIEFVSDVELVEEGVDEPTRPREIVSALRHLLKDSEAVTLSPVSSPDALRGP
Ga0137431_10071813	3300012038	Soil	VAQEQGDGDQPWELAGGHTGDGADESIEFVSDVEFVEESGDEAARPLETVGPIGEFLQNVAAVVLSPVLDLDALRRPGARL*
Ga0137344_10582352	3300012159	Soil	VAQQQRDGDQPWELADGHAGDGTDESIEFVSDVEFVEESGDEASRPPETVGTIGEFLQNVAAVVLSPVLDLDALRRPGARL*
Ga0137350_10235581	3300012166	Soil	VAQEQGDGDQPWELAGGHTGDGADESIEFVSDVEFVEESGDEAARPPETVGTIGEFLQNVAPMVLSPVLDLDALRRPGARL
Ga0137319_10134892	3300012167	Soil	VTQEQGDGDQPWELAGGHTGDGADESIEFVSDVEFVEESGDEAARPPETVGTIGEFLQNVAAVVLSPVLDLDALRRPGARL*
Ga0137338_10087821	3300012174	Soil	EPDALARARQVVERPAVAQEQGDGAQPWELAGGHTGDGADESIEFVSDVEFVEESGDEAARPPETVGTIGEFLQNVAAVVLSPVLDLDALRRPGARL*
Ga0137321_10110352	3300012175	Soil	PEPDALARARQVVERPAVAQEQGDGDQPWELAGGHTGDGADESIEFVSDVEFVEESGDEAARPLETVGTIGEFLQNVAAVVLSPVLDLDALRRPGARL*
Ga0137334_10098942	3300012179	Soil	VAQEQGDGDQPWELAGGHTGDGADESIEFVSDVEFVEESGDEAARPRETVGTIGEFLQNVAAVVLSPVLDLDALRRPGARL*
Ga0137465_10026016	3300012231	Soil	VAQEQGDGDQPWELAGGHTGDGADESIEFVSDVEFVEESGDEAARPPETVGTIGEFLQNVATVVLSPVLDLDALRRPGARL*
Ga0137367_104622142	3300012353	Vadose Zone Soil	DGHAGDGANESIEFVSDVEFVEESGDEAARPPETVGTIGEFLQNVAAVVLSPVLDLDALRRPCARL*
Ga0137369_101824262	3300012355	Vadose Zone Soil	VAQEQRDGDQPWELADGHAGDGANESIEFVSDVEFVEESGDEAARPPETVGTIGEFLQNVAAVVLSPVLDLDALRRPGARL*
Ga0157352_10272321	3300012519	Unplanted Soil	VAQQQRDGDQPWVLADGHAGDRTDESIEFVSDVEFVEEGVDEPTRPREIVCVLRHLLKDSEAVTLSPVSSLDALRRPGA
Ga0157284_100953061	3300012893	Soil	MPCARQVVERPAVTQQQCDGDQPWVLADGHAGDGTDESIEFVSDVEFVEEGVDEPTRPREIVCVFRHLLKDSEAVTLSPVSSLDALRRPGAWLWSRDS*
Ga0157290_100929791	3300012909	Soil	QGDGDQPWELAGGHTGDGADESIEFVSDVKFVEESGDEAARPLEIVGTIGEFLQNVAAVVLSPVLDLDALRRPGARL*
Ga0137394_108704451	3300012922	Vadose Zone Soil	VAQEQRDGDQPWELADGHAGDGANESIEFVSDVEFVEEGSDEAARPPETVGTIGEFLQNVAAVVLSPVLDLDALGRPGARL*
Ga0164303_111708741	3300012957	Soil	VAQEQGDGDQPWELAGGHPGDGADESIEFVSDVEFVEESGDEAARPPETVGTIGEFLQNVAAVVLSPVLDLDALRRPGARL*
Ga0164301_109785211	3300012960	Soil	VAQEQGDGDQPWELAGGHTGDGADESIEFVSDVEFVEESDDEAARPPETVGTIGEFLQNVAAVVLSPVLDLDALRRPGARL*
Ga0164307_106087812	3300012987	Soil	VAQEQGDGDQPWELAGGHTRDGADESIEFVSDVEFVEESGDEAARPPETVGTIGEFLQNVAAVVLSPVLDLDALRRPGARL*
Ga0163162_128577431	3300013306	Switchgrass Rhizosphere	VAQEQSDGDQPWELAGGYTGDGADESIEFVSDVEFVEESGDEAARPPETVGTIGEFLQNVAAVVLSPVLDLDALRRPGARL*
Ga0157375_104882392	3300013308	Miscanthus Rhizosphere	VAQQQRDGDQPWELADGHAGGGTDESIEFVSDVEFVEESGDEAARPPETVGTIGEFLQNVAAVVLSPVLDLDALRRPGARL*
Ga0075320_10413382	3300014255	Natural And Restored Wetlands	VAQQQRDGDQPWELADGHAGDGTDESIEFVSDVEFVEEGVDEAARPPETVGPIGEFLQNVAAVGLSPGLDLDALRRPGARL*
Ga0075325_11730621	3300014270	Natural And Restored Wetlands	VAQEQGDGNQPWELAGGHTGDGADESIEFVSDVEFVEESGDEAARPPETVGTIGEFLQNVAAVVLSPVLDLDALRRPGARL*
Ga0075303_10903331	3300014299	Natural And Restored Wetlands	VAQEQSDGDQPWELAGGHTGDGADESIEFVSDVEFVEESGDEAARPPETVGTVGEFLQNVATVVLSPVLDLDALRRPGAWLWFRDSLA
Ga0075310_10396081	3300014302	Natural And Restored Wetlands	VAQQQRDGDQPWELADGHAGDGTDESIEFVSDVEFVEEGVDEPTRPREIVSALRHLLKDSEAVTLSPVSSLDALRRPGAWLWFRDSLAGGSVAH
Ga0163163_115792122	3300014325	Switchgrass Rhizosphere	VAQEQGDGDQPWVLAGGYAGDGTDESIEFVSDVEFVEESGDEAARPPETVGTIGEFLQNVAAVVLSPVLDLDALRRPGARL*
Ga0180078_10009604	3300014865	Soil	MAQEQSDGDQPWELAGGHTGDGADESIEFVSDVEFVEESGDEAARPPETVGTIGEFLQNVAAVVLSPVLDLDALRRPGARL*
Ga0180090_10733491	3300014866	Soil	MAQEQGDGDQPWELAGGHTGDGADESIEFVSDVEFVEESGDEAARPPETVGTIGEFLQNVAAVVLSPVLDLDALRRPGARL*
Ga0180083_10056271	3300014875	Soil	VAQEQGDGDQPWELAGGHTGDGADESIEFVSDVEFVEESGDEAARPPETVGTIGEFLQNVAAVVLSPVLDLDALRRPGAR
Ga0180064_10055671	3300014876	Soil	VAQQQRDSDQPWELADGHAGDGADESIEFVSDVEFVEESGDEAARPPETVGTIGEFLQNVAAVVLSPVLDLDALRRPGARL*
Ga0180082_10067172	3300014880	Soil	VAQEQGDGNQPWELAGGHTGDGADESIEFVSDVEFVEESGDEAARPLETVGTIGEFLQNVAAVVLSPVLDLDALRRPGARL*
Ga0180063_12794181	3300014885	Soil	VAQEQGDGDQPWELAGGHTGDGADESIEFVSDVEFVEESGDEAARPPETVGTIGEFLQNVAAVVLSPVLDLDALRRPGARLSCRDSSADRAVAHGRHL
Ga0180071_10081461	3300015249	Soil	RARQVVERPAVAQEQGDGDQPWELAGGHTGDGADESIEFVSDVEFVEESGDEAARPPETVGTIGEFLQNVAAVVLSPVLDLDALRRPGARL*
Ga0180081_10465351	3300015253	Soil	VAQEQGDGDQPWELAGGHTGDGADESIEFVSDVEFVEESGDEAARPLETVGTIGEFVQNVAAVVLSPVLDLDALRRPGARL*
Ga0180077_10070042	3300015255	Soil	VAQEQSDGDQPWELAGGHTGDGADESIEFVSDVEFVEESGDEAARPPETVGTIGEFQQNVAAVVLSPVLDLDALRRPGARL*
Ga0180073_10342153	3300015256	Soil	VAQEQGDGDQPWELAGGHTGDGADESIEFVSDVEFVGEGIDEPTRPREIVSTFRHLLKDSEAVTLSPVSGLD
Ga0132256_1009145552	3300015372	Arabidopsis Rhizosphere	VAQEQSDGDQPWELAGGHTGDGADESIEFVSDVEFVEESRDEAARPLETVGTIGEFLQNVAAVVLSPVLDLDALRRPGARL*
Ga0187776_112238581	3300017966	Tropical Peatland	MPCARQVVERPAVAQQQCESDQPWELADGHAGDGTYESIEFVSDVEFVEEGVDEPTRPQEIVCALRHLLKNSEAVTLSPVSSLDA
Ga0184626_101535282	3300018053	Groundwater Sediment	VAQEQGDGDQPWELAGGHTGDGADESIEFVSDVEFVEESGDEAARPPETVGTIGGFQKNVAAVVLSPVLDLDALRRPGARL
Ga0184632_104178861	3300018075	Groundwater Sediment	VRPAVAQEQSDGDQPWELAGGHTGDGADESIEFVSDVEFVEESGDEAARPPETVGTIGEFLQNVAAVVLS
Ga0190272_112479361	3300018429	Soil	VRPAVAQEQSDGDQPWELAGGHTGDGADESIEFVSDVEFVEESGDEAARPPETVGTIGEFLQNVAAVVLSPVLDLDALRRPGARL
Ga0190270_116409191	3300018469	Soil	VAQEQGDGDQPWELAGGHTGDGADESIEFVSDVEFVEESGDEAARPPETVGTIGEFLQNVAAVVLSPVLDLDALRRPGARL
Ga0190264_102496482	3300019377	Soil	VAQQQRDGDQPWVLADGHAGDRTDESIEFVSDVEFVEEGVDEPTRPREIVSALRHLLKDSEAVTLSPVS
Ga0190264_106376841	3300019377	Soil	VAQEQGDGDQPWELAGGHTGDGADESIEFVSDVEFVEESGDEAARPHETVGTIGEFLQNVAAVVLSPVL
Ga0193717_10865712	3300020060	Soil	GDGDQPWELAGGHTGDGADESIEFVSDVEFVEESGDEAARPPETVGTIGEFLQNVAAVVLSPVLDLDALRRPGARL
Ga0207688_108128401	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	VAQEQGDGDQPWELAGGHTGDGADESIEFVSDVEFVEESDDEAARPPETVGTIGEFLQNAAAVVLSPVLDPN
Ga0207643_102851982	3300025908	Miscanthus Rhizosphere	VAQQQRDGDQPWELADGHAGDGTDESIEFVSDVEFVEEGVDEPTRPREIVSALRHLLKDSEAVTLSPVSSLDALRRPGAWLWFRDSLAG
Ga0209875_10064433	3300027209	Groundwater Sand	VAQEQGDGDQPWELAGGHTGDGADESIEFVSDVEFVEESGDEAARPPETVGTIGEFLQNVAAVVLSPVLDL
Ga0209813_103468511	3300027866	Populus Endosphere	VTKHQREGDQPWELAGGYTRERADESIEFVSDVEFVEEGVDEPTRPREIACAIRHFLKDSEAVTLSPVSSLDALGRPGAWLWFRDS
Ga0307281_100781662	3300028803	Soil	VAQEQGDGDQPWELAGGHTGEGADESIEFVSDVEFVEESGDEAARPPETVGTIGEFLQNVAAVVLSPVLDLDALRRPGARL
Ga0302046_104350281	3300030620	Soil	VAQEQSDGYQPWELAGGHTGDGADESIEFVSDVEFVEESGDEAARPPETVGTIGEFLQNVAAVVLSPVLDLDALRRPGARL
Ga0307499_101805481	3300031184	Soil	QPWELAGGHTGDGADESIEFVSDVEFVEESGDEAARPPETVGTIGEFLQNVAAVVLSPVLDLDALRRPGARL
Ga0307497_102618892	3300031226	Soil	DGDQPWELAGGHTGDGADESIEFVSDVEFVEESGDEAARPPETVGTIGEFLQNVAAVVLSPVLDLDALRRPGARL
(restricted) Ga0255312_10542311	3300031248	Sandy Soil	VAQEQSDGDQPWELAGGHTGDGADESIEFVSDVEFVEESGDEAARPPETVGTIGEFLQNVAAVVLSPVLDLDALRRPGARL
Ga0310886_103505241	3300031562	Soil	MPCARQVVKRPAVAQQQRDSDQPWELADGHAGDGADESIEFVSHVEFVEEGVDEPTRPREIVSALRHLLKNGEAVTLSPVSSLDALRRPGAWLW
Ga0310886_104552012	3300031562	Soil	MPCARQVVERPAVAQQQRDGDQPWVLADGHAGDRTDESIEFVSDVEFVEEGVDEPTRPREIACAIRHFLKDSEAVTLSPVSSLDALRRPGAWLWFRD
Ga0310885_100411511	3300031943	Soil	MPCARQVVKRPAVAQQQRDSDQPWELADGHAGDGADESIEFVSDVEFVEESGDEAARPPETVGTIGEFLQNVAAVVLSPVLDLDALRRPGARL
Ga0308173_116028581	3300032074	Soil	VTQDHRERDQPWELAGGHTGERADESIEFVSDVELVEEGGDEPTRPLQTVSAVRDFLQNVVAVVLSEVLRLDAIARPGAWLKLRDSSVRGSVAHGRHL
Ga0315912_100133981	3300032157	Soil	VAQEQSDGDQPWELAGGHTGDGADESIEFVSDVEFVKESGDEAARPPETVGTIGEFLKNVAAVVLSPVLDLNALRRPGAR
Ga0335085_103756604	3300032770	Soil	VAQQQRDGDQPWELADGHAGDGTDESIEFVSDVEFVEEGVDEPTRPREIVCVFRHLVKDSEAVTLSPVSSLDALRRPGAWLWFRDSLAGG
Ga0373895_054046_1_201	3300034075	Sediment Slurry	GGHTGDGADESIEFVSDVEFVEESGDEAARPPETVGTIGEFLQNVAAVVLSPVLDLDALRRPGARL
Ga0373895_058222_3_281	3300034075	Sediment Slurry	VAQQQRDGDQPWVLADGHAGDRTDESIEFVSDVEFVEEGVDEPTRPREIVCVLRHLLKDSEAVTLSPVSSLDALGRPGAWLWFRDSLAGGSVA
Ga0373897_029480_614_859	3300034080	Sediment Slurry	VAQQQRDGDQPWELADGHAGDGTDESIEFVSDVEFVEEGVDEAARPPETVGTIGEFLQNVAAVVLSPVLDLDALRRPGARL
Ga0370490_0002079_2378_2623	3300034128	Untreated Peat Soil	VAQEQGDGDQPWELAGGHTGDGADESIEFVSDVEFVEESGDEAARPLETVGPIGEFLQNVAAVVLSPVLDLDALRRPGARL
Ga0370495_0038970_119_364	3300034257	Untreated Peat Soil	VAQEQGDGDQPWELAGGHTGDGADESIEFVSDVEFVEESGDEAARPLETVGTIGEFLQNVAAVVLSPVLDLDALRRPGARL
Ga0373918_0208792_53_298	3300034420	Sediment Slurry	VAQEQGDGDQPWELAGGHTGDGADESIEFVSDVEFVEESGDEAARPPETVGTIGEFLKNVAAVVLSPVLDLDALRRPGARL

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters