Metagenome / Metatranscriptome Family F101136

Basic Information
Family ID	F101136
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	66 residues
Representative Sequence	MFAVDTFIDTVQGAKKYFVNTFVTDKEIQKPLNAFVDTQTAFVKQVFQTNQALAEQALTTFEKFAKTAKA
Number of Associated Samples	78
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	66.67 %
% of genes near scaffold ends (potentially truncated)	6.86 %
% of genes from short scaffolds (< 2000 bps)	14.71 %
Associated GOLD sequencing projects	69
AlphaFold2 3D model prediction	No

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (80.392 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake (31.372 % of family members)
Environment Ontology (ENVO)	Unclassified (81.373 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (89.216 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72 1JGI24768J34885_100144901 2JGI25908J49247_1000271111 3JGI25908J49247_100948572 4JGI25911J50253_100936651 5Ga0007746_13830171 6Ga0007745_13999681 7Ga0049083_100402202 8Ga0049081_100976744 9Ga0049081_101203881 10Ga0049080_100045894 11Ga0049080_101016831 12Ga0049080_101676192 13Ga0049080_102589182 14Ga0049080_102730121 15Ga0049085_101072252 16Ga0049082_103063383 17Ga0079957_10417016 18Ga0070744_101532242 19Ga0102828_10975722 20Ga0105746_11549291 21Ga0114343_10206633 22Ga0114364_102337111 23Ga0114364_10454661 24Ga0114364_10761592 25Ga0114364_10881542 26Ga0114876_10309967 27Ga0114973_100432304 28Ga0114973_101075123 29Ga0114962_101872213 30Ga0114962_103061642 31Ga0114963_103949243 32Ga0114963_104935151 33Ga0114963_105726041 34Ga0114968_100321466 35Ga0114978_103501793 36Ga0114981_101783611 37Ga0114966_100976656 38Ga0114970_101127991 39Ga0114975_100086552 40Ga0114979_102690403 41Ga0114969_105772801 42Ga0114959_101718593 43Ga0114974_101217092 44Ga0114965_144791 45Ga0114967_103333471 46Ga0136644_100238021 47Ga0136644_102286951 48Ga0157203_10305461 49Ga0157498_10186002 50Ga0138284_12526451 51Ga0164292_107688603 52Ga0164294_104788383 53Ga0136642_10563801 54Ga0177922_106378651 55Ga0181364_10055082 56Ga0181347_11030942 57Ga0181362_11089932 58Ga0181365_10232362 59Ga0181356_11785111 60Ga0181358_11580703 61Ga0181346_10979051 62Ga0181348_13127911 63Ga0181359_10448774 64Ga0181359_10701911 65Ga0211736_101342522 66Ga0211734_106869931 67Ga0211733_109293512 68Ga0211726_107247061 69Ga0211726_110571951 70Ga0211729_101716751 71Ga0211729_102692021 72Ga0208235_10212101 73Ga0208600_10694701 74Ga0181354_10143583 75Ga0181354_10604422 76Ga0181351_11375243 77Ga0214921_100261152 78Ga0244775_102889302 79Ga0244775_106411361 80Ga0208974_100463911 81Ga0208974_11130922 82Ga0208975_10071839 83Ga0209553_12536022 84Ga0209087_12512042 85Ga0209190_100637512 86Ga0209190_10993552 87Ga0209085_12634211 88Ga0209597_10845072 89Ga0209084_11858871 90Ga0209084_12056163 91Ga0209084_12277992 92Ga0209444_101046763 93Ga0209086_104231022 94Ga0209353_100361346 95Ga0209230_100138657 96Ga0209401_12234591 97Ga0315909_104467151 98Ga0315901_104379702 99Ga0315905_103733872 100Ga0315905_113101412 101Ga0315902_109164392 102Ga0335010_0380653_552_764
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72 1JGI24768J34885_100144901 2Ga0007746_13830171 3Ga0007745_13999681 4Ga0049081_100976744 5Ga0102828_10975722 6Ga0114975_100086552 7Ga0136642_10563801
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72 1JGI24768J34885_100144901 2Ga0007746_13830171 3Ga0007745_13999681 4Ga0049081_100976744 5Ga0102828_10975722 6Ga0114975_100086552 7Ga0136642_10563801
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 88.57% β-sheet: 0.00% Coil/Unstructured: 11.43%
Feature Viewer
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Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF02562	PhoH	47.06
PF00565	SNase	2.94
PF12086	DUF3563	2.94
PF01521	Fe-S_biosyn	0.98
PF13609	Porin_4	0.98
PF01027	Bax1-I	0.98
PF14236	DUF4338	0.98
PF09499	RE_ApaLI	0.98
PF13759	2OG-FeII_Oxy_5	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG1702	Phosphate starvation-inducible protein PhoH, predicted ATPase	Signal transduction mechanisms [T]	47.06
COG1875	Predicted ribonuclease YlaK, contains NYN-type RNase and PhoH-family ATPase domains	General function prediction only [R]	47.06
COG0316	Fe-S cluster assembly iron-binding protein IscA	Posttranslational modification, protein turnover, chaperones [O]	0.98
COG4841	Uncharacterized conserved protein YneR, related to HesB/YadR/YfhF family	Function unknown [S]	0.98

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	19.61 %
Unclassified	root	N/A	80.39 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.39 %
Viruses	superkingdom	All Organisms → Viruses	19.61 %

Name	Rank	Taxonomy	Distribution
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	14.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.90 %
Unclassified	root	N/A	80.39 %

Name	Rank	Taxonomy	Distribution
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	14.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.90 %
Unclassified	root	N/A	80.39 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.90 %
Unclassified	root	N/A	80.39 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	14.71 %

Name	Rank	Taxonomy	Distribution
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	14.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.90 %
Unclassified	root	N/A	80.39 %

Name	Rank	Taxonomy	Distribution
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	9.80 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.90 %
Unclassified	root	N/A	80.39 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.90 %
Unclassified	root	N/A	80.39 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	9.80 %

Scaffold	Taxonomy	Length	IMG/M Link
3300005580\|Ga0049083_10040220	All Organisms → Viruses → Predicted Viral	1660	Open in IMG/M
3300005581\|Ga0049081_10097674	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1096	Open in IMG/M
3300005582\|Ga0049080_10004589	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4802	Open in IMG/M
3300009068\|Ga0114973_10107512	All Organisms → Viruses → Predicted Viral	1581	Open in IMG/M
3300009151\|Ga0114962_10187221	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1218	Open in IMG/M
3300009151\|Ga0114962_10306164	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	885	Open in IMG/M
3300009159\|Ga0114978_10350179	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	894	Open in IMG/M
3300009163\|Ga0114970_10112799	All Organisms → Viruses → Predicted Viral	1670	Open in IMG/M
3300009186\|Ga0114965_14479	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	542	Open in IMG/M
3300010334\|Ga0136644_10023802	All Organisms → Viruses → Predicted Viral	4119	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	95.10%
Marine	Environmental → Aquatic → Marine	4.90%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	0.98%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.98%
Lake	Environmental → Aquatic → Freshwater → Lake	51.96%
Lentic	Environmental → Aquatic → Freshwater → Lentic	37.25%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.98%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	4.90%
Unclassified	Environmental → Aquatic → Marine → Unclassified	2.94%

Habitat	Taxonomy	Distribution
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	1.96%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.98%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	51.96%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	35.29%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	4.90%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	2.94%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.98%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	2.94%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.98%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.98%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	8.82%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	4.90%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	3.92%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	1.96%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.98%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	1.96%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	31.37%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	20.59%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.98%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	12.75%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	4.90%
Freshwater, Surface Ice	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Surface Ice	0.98%
Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake	0.98%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002447	Freshwater and sediment microbial communities from Lake Ontario - Sta 18 epilimnion Metagenome	Environmental	Open in IMG/M
3300003277	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD	Environmental	Open in IMG/M
3300003411	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SD	Environmental	Open in IMG/M
3300004763	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004765	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SD (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005580	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRF	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M
3300005583	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG SU08MSRF	Environmental	Open in IMG/M
3300005584	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF	Environmental	Open in IMG/M

Showing 1 to 10 of 78 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24768J34885_100144901	3300002447	Freshwater And Sediment	MFAVDTFIDTVQGAKKYFVNTFITDKEIQKPLNAFVDTQTAFVKQVFQTNKALTDQATATFE
JGI25908J49247_1000271111	3300003277	Freshwater Lake	MFAVDTFIDTVQGAKKYFVNTFITDKEMQKPLNAFVDTQTAFVKQVFQTNLALSEQVTATFEKFAKPSKS*
JGI25908J49247_100948572	3300003277	Freshwater Lake	MFAVNTFIDTVQGSKKYFVNTFITDKEIQKPLNAFVDTQTAFVKQIVETNKALTDQVLATFEKFASSAKV*
JGI25911J50253_100936651	3300003411	Freshwater Lake	MFAVDSFIDTVQGAKKYFVNTFVTDKEIQKPLNAFVDTQTAFVKQVFQTNQALAEQALTTLEKF
Ga0007746_13830171	3300004763	Freshwater Lake	VQGAKKYFVNTFITDKEMQKPLNAFVDTQTAFVKQVFQTNLALSEQVTATFEKFAKPSKS
Ga0007745_13999681	3300004765	Freshwater Lake	KKYFVNTFVTDKEIQKPLNAFVDTQTEFVKQIVKTNQALAEQALATFEKFAKTAKA*
Ga0049083_100402202	3300005580	Freshwater Lentic	MFAVDTFIDTVQGAKKYFVNTFVTDKEIQKPLNAFVDTQTAFVKQVFQTNQALAEQALTTFEKFAKTAKA*
Ga0049081_100976744	3300005581	Freshwater Lentic	TFIDTVQGAKKQFVTTFVTDKELQKPLFAFVDTQTAFVKQVVETNKALTEQATAAFQKFAKTAKV*
Ga0049081_101203881	3300005581	Freshwater Lentic	KYFVNTFITDKEIQKPLNAFVDTQTAFVKQIVQTNKALTDQATSTFEKFAKSAKA*
Ga0049080_100045894	3300005582	Freshwater Lentic	MFAVDTFIDTVQGAKKYFVNTFITDKEIQKPLNAFVDTQTAFVKQIVQTNKALTDQATSTFEKFAKSAKA*
Ga0049080_101016831	3300005582	Freshwater Lentic	KYFVNTFITDKEIQKPLNAFVDTQTAFVKQIVQTNKALSDQALATFEKFASSAKV*
Ga0049080_101676192	3300005582	Freshwater Lentic	MFAVDTFIDTVQGAKKYFVNTFVTDKEIQKPLNAFVDTQTAFVKQVFQTNQALAEQAL
Ga0049080_102589182	3300005582	Freshwater Lentic	MFAVDTFIDTVQGAKKYFVNTFITDKEIQKPLNAFVDTQTAFVKQIVQTNQALVDQATTTFEKFAKTSKA*
Ga0049080_102730121	3300005582	Freshwater Lentic	MFAVDTFIDTVQGAKKQFVTTFVTDKELQKPLFAFVDTQTAFVKQVVETNKALTEQATAAFQKFAKTAKV*
Ga0049085_101072252	3300005583	Freshwater Lentic	MFAVDTFIDTVQGAKKYFVNTFVTDKEIQKPLNAFVDTQTAFVKQVFQTNKALSDQALATFEKFAKSAKA*
Ga0049082_103063383	3300005584	Freshwater Lentic	DTVQGAKKYFVNTFVTDKEIQKPLNAFVDTQTAFVKQVFQTNQALAEQALNTLEKFAKTAKA*
Ga0079957_10417016	3300005805	Lake	MFAVDTFIDTVQGAKKQFVTTFVTDKELQKPLFAFVDTQTAFVKQVVETNKALTEQATAAFQKFAKTAKI*
Ga0070744_101532242	3300006484	Estuarine	MFAVDTFIDTVQGAKKYFVNTFITDKEIQKPLNAFVDTQTAFVKQVFQTNKVLSDQALATFEKFAKSAKA*
Ga0102828_10975722	3300007559	Estuarine	MFAVDTFIDTIQGAKKYFINTIVTDKDVQKQLNALVDSETSFTKQVVETNSKLADLVQSTLEKFAKPSKA*
Ga0105746_11549291	3300007973	Estuary Water	MFAVDTFIDTVQGAKKYFVNTFVTDKEIQKPLNAFVDTQTAFVKQIVQTNKALTDQATSTFEKFAKSAKA*
Ga0114343_10206633	3300008110	Freshwater, Plankton	MFAVDTFIDTVQGAKKQFVTTFVTDKELQKPLFAFVDTQTAFVKQVVETNKALAEQATAAFQKFAKTAKA*
Ga0114364_102337111	3300008267	Freshwater, Plankton	MFAVNTFIDTVQGSKKYFVNTFITDKEIQKPLNAFVDTQTAFVKQVFQTNKALTDQVLATFEKFASSAKV*
Ga0114364_10454661	3300008267	Freshwater, Plankton	MFAVDTFIDTVQGAKKYFVNTFVTDKEIQKPLNAFVDTQTAFVKQVFQTNQALAEQALNTLE
Ga0114364_10761592	3300008267	Freshwater, Plankton	MFAVDSFIDTVQGAKKYFVNTFVTDKEIQKPLNAFVDTQTAFVKQVFQTNQALAEQALTTFEKFAKTAKA*
Ga0114364_10881542	3300008267	Freshwater, Plankton	MFAVDTFIDTVQGAKKQFVTTFVTDKELQKPLFAFVDTQTAFVKQVVETNKTLAEQATAAFQKFAKTAKA*
Ga0114876_10309967	3300008448	Freshwater Lake	MFAVDTFIDTVQGAKKQFVTTFVTDKELQKPLFAFVDTQTAFVKQVVETNKVLAEQATAAFQKFAKTAKV*
Ga0114973_100432304	3300009068	Freshwater Lake	MFAVDTFIDTVQGAKKYFVNTFVTDKEIQKPLNAFVDTQTAFVKQAFQTNKALSDQALATFEKFAKSAKA*
Ga0114973_101075123	3300009068	Freshwater Lake	MFAVDTFIDTVQGAKKQFVSTFVTDKEIQKPLFAFVDTQTAFVKQVVETNKALTEQATAAFQKFAKTAKV*
Ga0114962_101872213	3300009151	Freshwater Lake	MFAVDTFIDTVQGAKKQFVSTFVTDKELQKPLFAFVDTQTAFVKQVVETNKALAEQATAAFQKFAKTAKV*
Ga0114962_103061642	3300009151	Freshwater Lake	MFAVDTFIDTVQGAKKYFVNTFVTDKEIQKPLNAFVDTQTAFVKQVFQTNQALTEQALNTLEKLAKTAKA*
Ga0114963_103949243	3300009154	Freshwater Lake	GAKKYFVNTFVTDKEIQKPLNAFVDTQTAFVKQVFQTNQALAEQALNTLEKLAKTAKA*
Ga0114963_104935151	3300009154	Freshwater Lake	MFAVDTFIDTIQGAKKYFVNTFITDKEIQKPLNAFVDTQTAFVKQAFQTNKALSDQALATFEKFAK
Ga0114963_105726041	3300009154	Freshwater Lake	MFAVDTFIDTVQGAKKYFVNTFVTDKEIQKPLNAFVDTQTAFVKQVFQTNQALAEQA
Ga0114968_100321466	3300009155	Freshwater Lake	MFAVNTFIDTVQGAKKYFVNTFVTDKEIQKPLNAFVDTQTAFVKQAFQTNKALSDQALATFEKFAKSAKA*
Ga0114978_103501793	3300009159	Freshwater Lake	MFAVDTFIDTVQGAKKQFVSTFVTDKEMQKPLNAFVDTQTAFVKQIVETNKVLTEQATAAFQKFAKTAKV*
Ga0114981_101783611	3300009160	Freshwater Lake	FIDTVQGAKKYFVNTFVTDKEIQKPLNAFVDTQTAFVKQVLQTNQALAEQALTTFEKFAKTAKA*
Ga0114966_100976656	3300009161	Freshwater Lake	MFAVDTFIDTVQGAKKYFVNTFVTDKEIQKPLNAFVDTQTAFVKQIVETNKALTEQATAAFQKFAKTAKV*
Ga0114970_101127991	3300009163	Freshwater Lake	KKYFVNTFVTDKEIQKPLNAFVDTQTAFVKQVFQTNQALAEQALTTFEKFTKSAKA*
Ga0114975_100086552	3300009164	Freshwater Lake	MFALDTFIDTIQNAKKQIVTTFVTDKELQKPLFAFVESQTDFVKQIVKTSEELTNQTKDAFTKKLKV*
Ga0114979_102690403	3300009180	Freshwater Lake	MFAVDTFIDTVQGAKKYFVNTFITDKEIQKPLNAFVDTQTAFVKQVFQTNQALAEQALTTLEKFAKTAKA*
Ga0114969_105772801	3300009181	Freshwater Lake	MFAVDTFIDTVQGAKKQFVTTFVTDKEIQKPLFAFVDTQTAFVKQVVETNKALTEQATAAFQKFAKTAKA*
Ga0114959_101718593	3300009182	Freshwater Lake	MFAVDTFIDTVQGAKKYFVNTFVTDKEIQKPLNAFVDTQTAFVKQVFQTNQALAEQALTTIEKFAKTAKA*
Ga0114974_101217092	3300009183	Freshwater Lake	MFAVDTFIDTVQGAKKQFVTTFVTDKEIQKPLFAFVDTQTAFVKQVVETNKALTEQATAAFQKFAKTAKV*
Ga0114965_144791	3300009186	Freshwater Lake	TFIDTVQGAKKYFVNTFVTDKEIQKPLNDFVDTQTAFVKQVFQTNQALAEQALTTIEKFAKTAKA*
Ga0114967_103333471	3300010160	Freshwater Lake	IDTVQGAKKYFVNTFVTDKEIQKPLNAFVDTQTAFVKQIVETNKALTEQATAAFQKFAKTAKV*
Ga0136644_100238021	3300010334	Freshwater Lake	QGAKKYFVNTFVTDKEIQKPLNAFVDTQTAFVKQVFQTNQALAEQSLTTFEKFAKTAKA*
Ga0136644_102286951	3300010334	Freshwater Lake	MFAVDTFIDTIQGAKKYFVNTFITDKEIQKPLNAFVDTQTAFVKQIVETNKALADQTVTAFEKFAKTSKI*
Ga0157203_10305461	3300012663	Freshwater	INMFAVDTFIDTVQGAKKYFVNTFITDKEIQKPLNAFVDTQTAFVKQIVQTNKALTDQATATFEKFAKSAKA*
Ga0157498_10186002	3300012666	Freshwater, Surface Ice	MFAVDTFIETVQGAKKYFVSTFVTDKEIQKPLNAFVDTQTAFVKQVFQTNQALAEQALNTLEKFAKTAKA*
Ga0138284_12526451	3300012779	Freshwater Lake	TFIDTVQGAKKYFVNTFVTDKEIQKPLNAFVDTQTAFVKQVFQTNQALAEQALNTFEKFAKTAKA*
Ga0164292_107688603	3300013005	Freshwater	TVQGAKKQFVSTFVTDKEIQKPLFAFVDTQTAFVKQVVETNKVLAEQATAAFQKFAKTAKV*
Ga0164294_104788383	3300013006	Freshwater	MFAVDTFIDTVQGAKKQFVSTFVTDKEIQKPLFAFVDTQTAFVKQIVETNKALTEQATAAFQKFAKTAKV*
Ga0136642_10563801	3300013285	Freshwater	IDTVQGAKKYFVNTFVTDKELQKPLHAFVDTQTAFVKQIVETNRALVDQALSTLDKFAEKA*
Ga0177922_106378651	3300013372	Freshwater	MFAVDTFIDTVQGAKKQFVTTFVTDKELQKPLFAFVDTQTAFVKQVVETNKVLAEQATAAFQKFAKTAKA*
Ga0181364_10055082	3300017701	Freshwater Lake	MFAVNTFIDTVQGSKKYFVNTFITDKEIQKPLNAFVDTQTAFVKQIVETNKALTNQALATFEKFASSAKV
Ga0181347_11030942	3300017722	Freshwater Lake	MFAVDSFIDTVQGAKKYFVNTFVTDKEIQKPLNAFVDTQTAFVKQVFQTNQALAEQAL
Ga0181362_11089932	3300017723	Freshwater Lake	MFAVDSFIDTVQGAKKYFVNTFVTDKEIQKPLNAFVDTQTAFVKQIVETNKALTDQAL
Ga0181365_10232362	3300017736	Freshwater Lake	MFAVDTFIDTVQGAKKYFVNTFVTDKEIQKPLNAFVDTQTAFVKQVFQTNQALAEQALTTFEKFAKTVKA
Ga0181356_11785111	3300017761	Freshwater Lake	TFIDTVQGAKKYFVNTFITDKEIQKPLNAFVDTQTAFVKQIVETNKALTNQALATFEKFASSAKV
Ga0181358_11580703	3300017774	Freshwater Lake	GAKKYFVNTFITDKEMQKPLNAFVDTQTAFVKQVFQTNLALSEQVTATFEKFAKPSKS
Ga0181346_10979051	3300017780	Freshwater Lake	IDTVQGAKKYFVNTFVTDKEIQKPLNAFVDTQTAFVKQVFQTNQALAEQALNTLEKFAKTAKA
Ga0181348_13127911	3300017784	Freshwater Lake	FIDTVQGAKKYFVNTFITDKEIQKPLNAFVDTQTAFVKQIVETNKALTNQALATFEKFASSAKV
Ga0181359_10448774	3300019784	Freshwater Lake	MFAVNTFIDTVQGSKKYFVNTFITDKEIQKPLNAFVDTQTAFVKQVFQTNKALTDQVLATFEKFASSAKV
Ga0181359_10701911	3300019784	Freshwater Lake	MFAVDTFIDTVQGAKKYFVNTFITDKEMQKPLNAFVDTQTAFVKQVFQTNLALSEQVTATFEKFAKPSKS
Ga0211736_101342522	3300020151	Freshwater	MFAVDTFIDTVQGAKKYFVNTFVTDKEIQKPLNAFVDTQTAFVKQVVETNKALTEQATAAFQKFAKTAKV
Ga0211734_106869931	3300020159	Freshwater	MFAVDTFIDTIQGAKKQFVSTFVTDKEIQKPLFAFVDTQTAFVKQVVETNKALTEQATAAFQKFAKTAKV
Ga0211733_109293512	3300020160	Freshwater	MFAVDTFIDTVQGAKKQFVSTFVTDKEIQKPLFAFVDTQTAFVKQVVETNKALTEQATAAFQKFAKTAKV
Ga0211726_107247061	3300020161	Freshwater	KKYFVNTFVTDKEIQKPLNAFVDTQTEFVKQIVKTNQALADQALSTFEKFAKPAKA
Ga0211726_110571951	3300020161	Freshwater	KKYFVNTFVTDKEIQKPLNAFVDTQTEFVKQIVKTNQALAEQALNTFEKFAKPAKA
Ga0211729_101716751	3300020172	Freshwater	AKKYFVNTFVTDKEIQKPLNAFVDTQTEFVKQMVKTNQALAEQAMNTFEKFAKSAKA
Ga0211729_102692021	3300020172	Freshwater	AKKYFVNTFVTDKEIQKPLNAFVDTQTEFVKQIVKTNQALADQALSTFEKFAKPAKA
Ga0208235_10212101	3300020530	Freshwater	MFAVDTFIDTVQGAKKYFVNTFITDKEIQKPLNAFVDTQTAFVKQIVQTNKALTDQATATFEKFAKSAKA
Ga0208600_10694701	3300020550	Freshwater	MFAVDTFIDTVQGAKKYFVNTFITDKEIQKPLNAFVDTQTAFVKQIVQTNQALVDQATTTFEKFAKTSKA
Ga0181354_10143583	3300022190	Freshwater Lake	MFAVNTFIDTVQGSKKYFVNTFITDKEIQKPLNAFVDTQTAFVKQIVETNKALTDQVLATFEKFASSAKV
Ga0181354_10604422	3300022190	Freshwater Lake	MFAVDTFIDTVQGAKKYFVNTFVTDKEIQKPLNAFVDTQTAFVKQVFQTNQALAEQALNTLD
Ga0181351_11375243	3300022407	Freshwater Lake	KKYFVNTYITDKEIQKPLNAFVDTQTAFIKQIVKTNQELTDQIQATLEKFAKPAKV
Ga0214921_100261152	3300023174	Freshwater	MFAVDTFIDTVQGAKKYFVNTFITDKEIQKPLNAFVDTQTAFVKQVFQTNKSLADQTLATFEKFAKPSKA
Ga0244775_102889302	3300024346	Estuarine	MFAVDTFIDTVQGAKKYFVNTFITDKEIQKPLNAFVDTQTAFVKQVFQTNKVLSDQALATFEKFAKSAKA
Ga0244775_106411361	3300024346	Estuarine	VDTFIDTVQGAKKYFVNTFVTDKEIQKPLNAFVDTQTAFVKQVFQTNQALAEQALTTFEKFAKTAKA
Ga0208974_100463911	3300027608	Freshwater Lentic	MFAVDTFIDTVQGAKKYFVNTFITDKEIQKPLNAFVDTQTAFVKQIVQTNKALTDQATSTFEKFAKSAKA
Ga0208974_11130922	3300027608	Freshwater Lentic	KYFVNTFITDKEIQKPLNAFVDTQTAFVKQIVQTNKALSDQALATFEKFASSAKV
Ga0208975_10071839	3300027659	Freshwater Lentic	MFAVDTFIDTVQGAKKQFVTTFVTDKELQKPLFAFVDTQTAFVKQVVETNKALAEQATAAFQKFAKTAKA
Ga0209553_12536022	3300027688	Freshwater Lake	MFAVNTFIDTVQGAKKYFVNTFITDKEIQKPLNAFVDTQTAFVKQVFQTNKALTDQVLATFEKFASSAKV
Ga0209087_12512042	3300027734	Freshwater Lake	MFAVDTFIDTVQGAKKQFVSTFVTDKEMQKPLNAFVDTQTAFVKQIVETNKVLTEQATAAFQKFAKTAKV
Ga0209190_100637512	3300027736	Freshwater Lake	MFAVDTFIDTVQGAKKYFVNTFVTDKEIQKPLNAFVDTQTAFVKQVFQTNQALAEQALTTFEKFAKTAKA
Ga0209190_10993552	3300027736	Freshwater Lake	MFAVNTFIDTVQGAKKYFVNTFVTDKEIQKPLNAFVDTQTAFVKQAFQTNKALSDQALATFEKFAKSAKA
Ga0209085_12634211	3300027741	Freshwater Lake	MFAVDTFIDTVQGAKKYFVNTFVTDKEIQKPLNAFVDTQTAFVKQVFQTNQALAEQALTTIEKFAKTAKA
Ga0209597_10845072	3300027746	Freshwater Lake	MFAVDTFIDTVQGAKKYFVNTFVTDKEIQKPLNAFVDTQTAFVKQAFQTNKALSDQALATFEKFAKSAKA
Ga0209084_11858871	3300027749	Freshwater Lake	MFAVDTFIDTVQGAKKYFVNTFVTDKEIQKPLNAFVDTQTAFVKQVFQTNQALAEQALTT
Ga0209084_12056163	3300027749	Freshwater Lake	QGAKKYFVNTFVTDKEIQKPLNAFVDTQTAFVKQVFQTNQALTEQALNTLEKLAKTAKA
Ga0209084_12277992	3300027749	Freshwater Lake	MFAVDTFIDTVQGAKKQFVSTFVTDKELQKPLFAFVDTQTAFVKQVVETNKALAEQAT
Ga0209444_101046763	3300027756	Freshwater Lake	MFAVDTFIDTVQGAKKYFVNTFITDKEIQKPLNAFVDTQTAFVKQIVETNKALTDQVLATFEKFASSAKV
Ga0209086_104231022	3300027770	Freshwater Lake	MFAVDTFIDTVQGAKKYFVNTFVTDKEIQKPLNAFVDTQTAFVKQIVETNKALTEQATAAFQKFAKTAKV
Ga0209353_100361346	3300027798	Freshwater Lake	MFAVDTFIDTVQGAKKYFVNTFITDKEMQKPLNAFVDTQTAFVKQVFQTNLALSEQVTA
Ga0209230_100138657	3300027836	Freshwater And Sediment	MFAVDTFIDTVQGAKKYFVNTFITDKEIQKPLNAFVDTQTAFVKQVFQTNKALTDQATATFEKFAKTSKA
Ga0209401_12234591	3300027971	Freshwater Lake	TVQGAKKQFVSTFVTDKEIQKPLFAFVDTQTAFVKQVVETNKALTEQATAAFQKFAKTAK
Ga0315909_104467151	3300031857	Freshwater	MFAVDTFIDTVQGAKKQFVTTFVTDKELQKPLFAFVDTQTAFVKQVVETNKALAEQA
Ga0315901_104379702	3300031963	Freshwater	MFAVDTFIDTVQGAKKQFVTTFVTDKELQKPLFAFVDTQTAFVKQVVETNKVLAEQATAAFQKFAKTAKA
Ga0315905_103733872	3300032092	Freshwater	MFAVDTFIDTVQGAKKYFVNTFVTDKEIQKPLNAFVDTQTAFVKQVFQTNKALSDQALATFEKFAKSAKA
Ga0315905_113101412	3300032092	Freshwater	MFAVDTFIDTVQGAKKYFVNTFITDKEIQKPLNAFVDTQTAFVKQIVQTNKALTDQATSTFEKFAKSSKA
Ga0315902_109164392	3300032093	Freshwater	MFAVDTFIDTVQGAKKQFVTTFVTDKELQKPLFAFVDTQTAFVKQVVETNKALAEQATAAFQKFAKTAKV
Ga0335010_0380653_552_764	3300034092	Freshwater	MFAVDTFIDTVQGAKKQFVSTFVTDKELQKPLNAFVDTQTAFVKQIVETNKVLTEQATAAFQKFAKTAKV

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F101136

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences