NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F101120

Metagenome / Metatranscriptome Family F101120

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F101120
Family Type Metagenome / Metatranscriptome
Number of Sequences 102
Average Sequence Length 131 residues
Representative Sequence VKGPGDAIVWEDGPHDRNYAYHKVATYDAGGGRLKIDVFVAASPSRSCPLRIAVHSSTSPDAQRLALTDPGDADLHLTDIDNRLRKMGLPSVLAAYCAGDVVALIKRDAENIRATQRELQRRAITDAPPGPGVGARG
Number of Associated Samples 89
Number of Associated Scaffolds 102

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 78.43 %
% of genes near scaffold ends (potentially truncated) 36.27 %
% of genes from short scaffolds (< 2000 bps) 83.33 %
Associated GOLD sequencing projects 83
AlphaFold2 3D model prediction Yes
3D model pTM-score0.73

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (76.471 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(20.588 % of family members)
Environment Ontology (ENVO) Unclassified
(37.255 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(64.706 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 30.91%    β-sheet: 21.21%    Coil/Unstructured: 47.88%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.73
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
d.142.1.4: Succinyl-CoA synthetase, beta-chain, N-terminal domaind2nu8b22nu80.57146
d.142.1.0: automated matchesd6melb16mel0.56199
d.142.1.4: Succinyl-CoA synthetase, beta-chain, N-terminal domaind6xrub16xru0.54814
e.29.1.1: RNA-polymerase betad1twfb_1twf0.53398
d.25.1.1: Mitochondrial glycoprotein MAM33-liked1yqfa11yqf0.52669


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 102 Family Scaffolds
PF05872HerA_C 20.59
PF12697Abhydrolase_6 13.73
PF12695Abhydrolase_5 2.94
PF00561Abhydrolase_1 1.96
PF01904DUF72 1.96
PF07687M20_dimer 1.96
PF00117GATase 0.98
PF17147PFOR_II 0.98
PF07676PD40 0.98
PF12146Hydrolase_4 0.98
PF00005ABC_tran 0.98
PF02518HATPase_c 0.98

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 102 Family Scaffolds
COG0433Archaeal DNA helicase HerA or a related bacterial ATPase, contains HAS-barrel and ATPase domainsReplication, recombination and repair [L] 20.59
COG1801Sugar isomerase-related protein YecE, UPF0759/DUF72 familyGeneral function prediction only [R] 1.96


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms76.47 %
UnclassifiedrootN/A23.53 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300004156|Ga0062589_101481028Not Available666Open in IMG/M
3300004479|Ga0062595_101073531Not Available701Open in IMG/M
3300004479|Ga0062595_101876764All Organisms → cellular organisms → Bacteria → Acidobacteria573Open in IMG/M
3300005093|Ga0062594_101409286All Organisms → cellular organisms → Bacteria → Acidobacteria708Open in IMG/M
3300005293|Ga0065715_10218248All Organisms → cellular organisms → Bacteria1283Open in IMG/M
3300005293|Ga0065715_10329834All Organisms → cellular organisms → Bacteria → Acidobacteria986Open in IMG/M
3300005294|Ga0065705_10426681All Organisms → cellular organisms → Bacteria → Acidobacteria851Open in IMG/M
3300005330|Ga0070690_101525725Not Available540Open in IMG/M
3300005332|Ga0066388_100712696All Organisms → cellular organisms → Bacteria1609Open in IMG/M
3300005354|Ga0070675_100898194All Organisms → cellular organisms → Bacteria → Acidobacteria812Open in IMG/M
3300005441|Ga0070700_101456472Not Available581Open in IMG/M
3300005468|Ga0070707_100216582All Organisms → cellular organisms → Bacteria1866Open in IMG/M
3300005617|Ga0068859_100336019All Organisms → cellular organisms → Bacteria1605Open in IMG/M
3300005713|Ga0066905_100188098All Organisms → cellular organisms → Bacteria1531Open in IMG/M
3300005719|Ga0068861_102081404All Organisms → cellular organisms → Bacteria → Acidobacteria567Open in IMG/M
3300005764|Ga0066903_100211132All Organisms → cellular organisms → Bacteria2924Open in IMG/M
3300005841|Ga0068863_100158460All Organisms → cellular organisms → Bacteria2168Open in IMG/M
3300005937|Ga0081455_10206331All Organisms → cellular organisms → Bacteria → Acidobacteria1468Open in IMG/M
3300005985|Ga0081539_10369483All Organisms → cellular organisms → Bacteria600Open in IMG/M
3300006031|Ga0066651_10702271All Organisms → cellular organisms → Bacteria → Acidobacteria543Open in IMG/M
3300006049|Ga0075417_10074057Not Available1511Open in IMG/M
3300006049|Ga0075417_10107776All Organisms → cellular organisms → Bacteria → Acidobacteria1268Open in IMG/M
3300006572|Ga0074051_11595897Not Available566Open in IMG/M
3300006577|Ga0074050_11911264All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Bradymonadales → Bradymonadaceae → Persicimonas → Persicimonas caeni827Open in IMG/M
3300006578|Ga0074059_12098530Not Available562Open in IMG/M
3300006579|Ga0074054_12170356All Organisms → cellular organisms → Bacteria → Acidobacteria742Open in IMG/M
3300006604|Ga0074060_12050445All Organisms → cellular organisms → Bacteria712Open in IMG/M
3300006606|Ga0074062_11625430Not Available554Open in IMG/M
3300006844|Ga0075428_100111491All Organisms → cellular organisms → Bacteria2980Open in IMG/M
3300006844|Ga0075428_101497402Not Available707Open in IMG/M
3300006852|Ga0075433_10061570All Organisms → cellular organisms → Bacteria3287Open in IMG/M
3300006852|Ga0075433_10103590All Organisms → cellular organisms → Bacteria2521Open in IMG/M
3300006852|Ga0075433_10371619All Organisms → cellular organisms → Bacteria → Acidobacteria1263Open in IMG/M
3300006854|Ga0075425_101416197All Organisms → cellular organisms → Bacteria → Acidobacteria786Open in IMG/M
3300006854|Ga0075425_101942561All Organisms → cellular organisms → Bacteria → Acidobacteria659Open in IMG/M
3300006854|Ga0075425_102237981All Organisms → cellular organisms → Bacteria → Acidobacteria608Open in IMG/M
3300006903|Ga0075426_10651417Not Available788Open in IMG/M
3300006904|Ga0075424_101233635Not Available796Open in IMG/M
3300007076|Ga0075435_101183510Not Available669Open in IMG/M
3300009012|Ga0066710_100487523All Organisms → cellular organisms → Bacteria → Acidobacteria1855Open in IMG/M
3300009012|Ga0066710_104359005Not Available529Open in IMG/M
3300009094|Ga0111539_10265283All Organisms → cellular organisms → Bacteria1999Open in IMG/M
3300009100|Ga0075418_13064099All Organisms → cellular organisms → Bacteria → Acidobacteria509Open in IMG/M
3300009101|Ga0105247_11185138Not Available607Open in IMG/M
3300009147|Ga0114129_10000961All Organisms → cellular organisms → Bacteria37631Open in IMG/M
3300009147|Ga0114129_10019669All Organisms → cellular organisms → Bacteria9611Open in IMG/M
3300009148|Ga0105243_10178711All Organisms → cellular organisms → Bacteria1844Open in IMG/M
3300009156|Ga0111538_10331032All Organisms → cellular organisms → Bacteria1928Open in IMG/M
3300009156|Ga0111538_10580814All Organisms → cellular organisms → Bacteria1421Open in IMG/M
3300009162|Ga0075423_12179317Not Available602Open in IMG/M
3300010047|Ga0126382_10405070All Organisms → cellular organisms → Bacteria → Acidobacteria1066Open in IMG/M
3300010359|Ga0126376_12571529Not Available557Open in IMG/M
3300010362|Ga0126377_10529866All Organisms → cellular organisms → Bacteria → Acidobacteria1214Open in IMG/M
3300010391|Ga0136847_12917668All Organisms → cellular organisms → Bacteria → Acidobacteria1310Open in IMG/M
3300010400|Ga0134122_10725831Not Available938Open in IMG/M
3300010403|Ga0134123_12026793All Organisms → cellular organisms → Bacteria → Acidobacteria634Open in IMG/M
3300011270|Ga0137391_10995782All Organisms → cellular organisms → Bacteria682Open in IMG/M
3300011444|Ga0137463_1046970All Organisms → cellular organisms → Bacteria → Acidobacteria1603Open in IMG/M
3300012203|Ga0137399_11058017All Organisms → cellular organisms → Bacteria → Acidobacteria683Open in IMG/M
3300012204|Ga0137374_10424575All Organisms → cellular organisms → Bacteria1050Open in IMG/M
3300012285|Ga0137370_10914755All Organisms → cellular organisms → Bacteria → Acidobacteria542Open in IMG/M
3300012354|Ga0137366_10219891All Organisms → cellular organisms → Bacteria1414Open in IMG/M
3300012355|Ga0137369_10448486All Organisms → cellular organisms → Bacteria → Acidobacteria921Open in IMG/M
3300012511|Ga0157332_1048545All Organisms → cellular organisms → Bacteria → Acidobacteria602Open in IMG/M
3300012922|Ga0137394_10867212All Organisms → cellular organisms → Bacteria → Acidobacteria755Open in IMG/M
3300012944|Ga0137410_11225009Not Available647Open in IMG/M
3300012957|Ga0164303_10479482All Organisms → cellular organisms → Bacteria → Acidobacteria791Open in IMG/M
3300012958|Ga0164299_10119237All Organisms → cellular organisms → Bacteria1407Open in IMG/M
3300012960|Ga0164301_10306175Not Available1072Open in IMG/M
3300013297|Ga0157378_11106182All Organisms → cellular organisms → Bacteria → Acidobacteria829Open in IMG/M
3300014326|Ga0157380_11380647Not Available754Open in IMG/M
3300014745|Ga0157377_10757092All Organisms → cellular organisms → Bacteria → Acidobacteria711Open in IMG/M
3300014968|Ga0157379_10060476All Organisms → cellular organisms → Bacteria → Acidobacteria3386Open in IMG/M
3300014969|Ga0157376_10128384All Organisms → cellular organisms → Bacteria → Acidobacteria2258Open in IMG/M
3300015371|Ga0132258_10362583All Organisms → cellular organisms → Bacteria3588Open in IMG/M
3300015371|Ga0132258_13087611All Organisms → cellular organisms → Bacteria1152Open in IMG/M
3300015373|Ga0132257_101956115All Organisms → cellular organisms → Bacteria → Acidobacteria755Open in IMG/M
3300015374|Ga0132255_100199019All Organisms → cellular organisms → Bacteria2832Open in IMG/M
3300018067|Ga0184611_1009551All Organisms → cellular organisms → Bacteria2716Open in IMG/M
3300018072|Ga0184635_10231087All Organisms → cellular organisms → Bacteria → Acidobacteria734Open in IMG/M
3300018073|Ga0184624_10006028All Organisms → cellular organisms → Bacteria3967Open in IMG/M
3300020005|Ga0193697_1003640All Organisms → cellular organisms → Bacteria3884Open in IMG/M
3300021178|Ga0210408_10180597All Organisms → cellular organisms → Bacteria → Acidobacteria1676Open in IMG/M
3300025315|Ga0207697_10132663All Organisms → cellular organisms → Bacteria → Acidobacteria1077Open in IMG/M
3300025903|Ga0207680_10580288All Organisms → cellular organisms → Bacteria → Acidobacteria801Open in IMG/M
3300025918|Ga0207662_10317469All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1039Open in IMG/M
3300025922|Ga0207646_10461881All Organisms → cellular organisms → Bacteria → Acidobacteria1145Open in IMG/M
3300025923|Ga0207681_10022436All Organisms → cellular organisms → Bacteria4026Open in IMG/M
3300025926|Ga0207659_10453261All Organisms → cellular organisms → Bacteria → Acidobacteria1081Open in IMG/M
3300025930|Ga0207701_10190518All Organisms → cellular organisms → Bacteria1806Open in IMG/M
3300025931|Ga0207644_10370477All Organisms → cellular organisms → Bacteria → Acidobacteria1166Open in IMG/M
3300025937|Ga0207669_10750438Not Available806Open in IMG/M
3300025972|Ga0207668_10613073All Organisms → cellular organisms → Bacteria → Acidobacteria949Open in IMG/M
3300026088|Ga0207641_10012996All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus6830Open in IMG/M
3300026088|Ga0207641_11041309All Organisms → cellular organisms → Bacteria → Acidobacteria816Open in IMG/M
3300026118|Ga0207675_100612574All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1093Open in IMG/M
3300027821|Ga0209811_10005340All Organisms → cellular organisms → Bacteria → Acidobacteria4129Open in IMG/M
3300027873|Ga0209814_10248879Not Available771Open in IMG/M
3300031820|Ga0307473_10316019Not Available990Open in IMG/M
3300031858|Ga0310892_10982457All Organisms → cellular organisms → Bacteria → Acidobacteria594Open in IMG/M
3300031901|Ga0307406_12094243Not Available507Open in IMG/M
3300032205|Ga0307472_100194538All Organisms → cellular organisms → Bacteria1535Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere20.59%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil7.84%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.88%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere5.88%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil3.92%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere3.92%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere3.92%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.94%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil2.94%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil2.94%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.94%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.94%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere2.94%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.96%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.96%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.96%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.96%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere1.96%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere1.96%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.96%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment0.98%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.98%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.98%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.98%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.98%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.98%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.98%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.98%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.98%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.98%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.98%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.98%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005937Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300005985Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2Host-AssociatedOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006572Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006577Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006578Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006579Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006604Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006606Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010391Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300011444Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2EnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012511Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_10EnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300018067Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coexEnvironmentalOpen in IMG/M
3300018072Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2EnvironmentalOpen in IMG/M
3300018073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1EnvironmentalOpen in IMG/M
3300020005Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2EnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300025315Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)Host-AssociatedOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027821Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031858Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2EnvironmentalOpen in IMG/M
3300031901Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2Host-AssociatedOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0062589_10148102813300004156SoilVKGPGDAIVWEDGPHNRDYAYHKVATYGAGGGRLQIDVFVAASPARPCPLRIAVHNSTSPDAQHLALTDPGDADLHLAEIDNRLKKLGLPSVLAAYCAGDIVALIKRDAENIRATQRELQRRAITDPLPGPGLGAGARG*
Ga0062595_10107353123300004479SoilVKGPGDAIVWEDGPHDHDYAYHKVATYDAGGGRLKIDVFVAAAPSRSCPLRIAVHSTTSPDAQRLALTDPGDADLHLTDIDNRLRKMGLPSVLAAYCAGDVVALIKRDAENIRATQRELQRRAITDAPPGPGLGARG*
Ga0062595_10187676413300004479SoilVKGPGDAIVWEDGPHDRNYAYHKVATYDAGGGRLKIDVFVAASPSRSCPLRIAVHSSTSPDAQRLALTDPGDADLHLTDIDNRLRKMGLPSVLAAYCAGDVVALIKRDAENIRATQRE
Ga0062594_10140928623300005093SoilVKGPGDAIVWEDGPHNRDYAYHKVATYGAGAGRLQIDVFVAASPARPCPLRIAVHNSTSPDAQHLALTDPGDADLHLAEIDNRLKKLGLPSVLAAYCAGDIVALIKRDAENIRATQRELQRRAITDPLPGPGLGAGARG*
Ga0065715_1021824823300005293Miscanthus RhizosphereVKGPGDAIVWEDGPHNRDYAYHKVATYGAGGGRLQIDVFVAASPARPCPLRIAVHNSTSPDAQHLALTDPGDADLHLAEIDNRLKKLGLPSVLAAYCAGDIVALIKRDAENIRATQRELQRRAMTDPLPGPGLGAGARG*
Ga0065715_1032983423300005293Miscanthus RhizosphereVKGPGDAIVWEDGPHDHDYAYHKVATYDAGGGRLKIDVFVAAAPSRSCPLRIAVHSTTSPDAQRLALTDPGDADLHLTDIDNRLRKMGLPSVLAAYCAGDVVALIKRDAENIRATQRELQRR
Ga0065705_1042668113300005294Switchgrass RhizosphereVWEEGPHDRDYAYHKVATYDVGSGRLKIDVSVAASPSRSCPLRIAVHSTTSPDAQRLTLTDPGDADLHLADIDNRLKKLGLPSVLAAYCAGDVVALIKRDAENIRATQRELQRRAIIDAPPGPGLG
Ga0070690_10152572513300005330Switchgrass RhizosphereVKGPGDTIVWEDGPHNRDYAYHKVATYDAGGGRLKIDVFVAAAPSRSCPLRIAVHSTTSPDAQRLALTDPGDADLHLTDIDNRLRKMGLPSVLAAYCAGDVVALIKRDAENIRATQRELQRRAITDAPPGPGLGARG*
Ga0066388_10071269623300005332Tropical Forest SoilVKGPGDAIVWEDGPQDRNYAYHKVATYDAGGGRLKIDVFVAASPSRSCPLRIAVHSSTSLDARRLALTDPGDADLHLTDIDNHLRKMGLSSVLAAYCAGDVVALIKRDAENIRATQRELQRRANTDPPPAPGLGARG*
Ga0070675_10089819423300005354Miscanthus RhizosphereVKGPGDAIVWEDGPHDRNYAYHKVATYDAGGGRLKIDVFVAASPSRSCPLRIAVHSSTSPNAQRLALTDPGDADLHLTDIDNRLRKMGLPSVLAAYCAGDVVALIKRDAENIRATQRE
Ga0070700_10145647213300005441Corn, Switchgrass And Miscanthus RhizosphereHNRDYAYHKVATYGAGGGRLQIDVFVAASPARPCPLRIAVHNSTSPDAQHLALTDPGDADLHLAEIDNRLKKLGLPSVLAAYCAGDIVALIKRDAENIRATQRELQRRAMTDPLPGPGLGAGARG*
Ga0070707_10021658233300005468Corn, Switchgrass And Miscanthus RhizosphereLGSSQIFWGLELLRLSDTTVVKRLGDAIVWEDGPQNQGFAYHKVATYDADGGRLKIDVFVTASPSLPCPLRIAVHSSKSPDPQRLALTDPGDADLHLIDIDSRLRKLGLPSILAAYCAGDVVALIKRDAENIRATQRELARRAAGPRTT*
Ga0068859_10033601923300005617Switchgrass RhizosphereVKGPGDTIVWEDGPHNRDYAYHKVATYDAGGGRLKIDVFVAASPPRPCPLRIAVHSSRSPDAQRLALTDPGDADLHLTEIDNRLRKMGLPSVLAAYCAGDVVALIKRDAENIRATQRELQRRAITDAPPGPGVGVTG*
Ga0066905_10018809823300005713Tropical Forest SoilVKGPRDTIVWEDGPQDRNYAYHKVATYDAGGGRLKIDVFVAALPSRSCPLRIAVHSSTSPDARRLALTDPGDADLHLTDIDNHLRKMGLSSVLAAYCAGDVVALIKRDAENIRATQRELQRRANTDAPPPPGVGAGG*
Ga0068861_10208140423300005719Switchgrass RhizosphereVKGPGDAIVWEDGPHNRDYAYHKVATYGAGGGRLQIDVFVAASPARPCPLRIAVHNSTSPDAQHLALTDPGDADLHLAEIDNRLKKLGLPSVLAAYCAGDIVALIKRDAENIRATQRELQRRA
Ga0066903_10021113233300005764Tropical Forest SoilVKGPGDAIVWEDGPQDRNYAYHKVATYDAGSGRLKIDVFVAALPSRSCPLRIAVHSSTSPDARRLTLTDPGDADLHLTDIDNHLRKMGLSSVLAAYCAGDVVALIKRDAENIRATQRELQRRANTDAPPAPSVGAGG*
Ga0068863_10015846023300005841Switchgrass RhizosphereVKGPGDAIVWEDGPHDRNYAYHKVATYDAGGGRLKIDVFVAASPSRSCPLRIAVHSSTSPDAQRLALTDPGDADLHLTDIDNRLRKMGLPSVLAAYCAGDVVALIKRDAENIRATQRELQRRAITGAPPGPGVGVTG*
Ga0081455_1020633133300005937Tabebuia Heterophylla RhizosphereVKGPGDAIVWEDGPQDRNYAYHKVATYDAGGGRLKIDVFVAALPSRSCPLRIAVHSSTSPDARRLALTDPGDADLHLTDIDNHLRKMGLSSVLAAYCAGDVVALIKRDAENIRATQRELQRRANADAPPAPGVGAGG*
Ga0081539_1036948313300005985Tabebuia Heterophylla RhizospherePLRLGDTTRMKPGPPIVWEDCAPDSDCAYHKVATYDATGGCLQIDVFVRASTSSPFPVRIAVKSSKSPDPQQLALIDPGDADLHLADIDNGLKKLGLPSVLAAYCAGDVVALIKREAASIRATQRELELRRRRLRQDEAS*
Ga0066651_1070227123300006031SoilVKGPGDAIVWEDGPHDRDYAYHKVATYDAGNGRLKIDVFVAASPSRSCPLRIAVHSSALPDAQRLALTDPGDADLHLTDIDNRLRKMGLPSVLAAYCAGDVVALIKRD
Ga0075417_1007405713300006049Populus RhizosphereLRDTTVVKRPGDSIVWEDGPHDRDCAYHKVATYDADGGRLKIDVFVTASPPAPCPVRIAVHHSKSPDPQRLALTDPGDADLHLTDIDNRLRKLGLPSILAAYCAGDVVALIKRDAENIRATQRELERRAITGRAAGGGTRGSGLAE*
Ga0075417_1010777623300006049Populus RhizosphereVKKPLDPIVWEDGPLDQGCAYHKVATYDAGGGRLKIDVFVKPSAAATCPVRIAVHSSKSPDPQRFTLADPGDADSHLTDIDQRLKNLGLPAVLAAYCAADVVALIKREAVSIRATQRELEGLV*
Ga0074051_1159589713300006572SoilVKGPGDAIVWEDGPQDHDYAYHKVATYDAGGGRLKIDVFVAAAPSRSCPLRIAVHSTTSPDAQRLALTDPGDADLHLTEIDNRLRKMGLPSVLAAYCAGDVVALIKRDAENIRATQRELQRRAIIGAPPGPGPDLLTS*
Ga0074050_1191126423300006577SoilVKGPGDAIVWEDGPQDHDYAYHKVATYDAGGGRLKIDVFVAAAPSRSCPLRIAVHSTTSPDAQRLALTDPGDADLHLTEIDNRLRKMGLPSVLAAYCAGDVVALIKRDAENIRATQRELQRRAITEAPPGPGVGVTG*
Ga0074059_1209853013300006578SoilVKGPGDAIVWEDGPHDHDYAYHKVATYDAGGGRLKIDVFVAAAPSRSCPLRIAVHSTTSPDAQRLALTDPGDADLHLTEIDNRLRKMGLPSVLAAYCAGDVVALIKRDAENIRATQRELQRRAIIGAPPGPGPDLLTS*
Ga0074054_1217035613300006579SoilVKGPGDAIVWEDGPQDHDYAYHKVATYDAGSGRLKIDVFVAAAPSRSCPLRIAVHSTTSPDAQRLALTDPGDADLHLTEIDNRLRKMGLPSVLAAYCAGDVVALIKRDAENIRATQRELQRRAITRCDRRVRVDWPHSPYFRYT
Ga0074060_1205044513300006604SoilVKGPGDAIVWEDGPHDHDYAYHKVATYDAGSGRLKIDVFVAAAPSRFCPVRIAVHSATSPDAQRLALTDPGDADLHLTDIDNRLRKMGLPSVLAAYCAGDVVALIKRDAENIRATQRELQRRAITDAPPGPGVGVTG*
Ga0074062_1162543013300006606SoilHDYAYHKVATYDAGGGRLKIDVFVAAAPSRFCPVRIAVHSATSPDAQRLALTDPGDADLHLTEIDNRLRKMGLPSVLAAYCAGDVVALIKRDAENIRATQRELQRRAITDAPPGPGPDLLTS*
Ga0075428_10011149123300006844Populus RhizosphereVKGPGEAIVWEEGPHDRDYAYHKVATYDVGSGRLKIDVSVAASPSRSCPLRIAVHSTTTPDAQRLTLTDPGDADLHLADIDNRLKKLGLPSVLAAYCAGDVVALIKRDAENIRATQRELQRRAIIDAPPGPGLGAGG*
Ga0075428_10149740223300006844Populus RhizosphereKVATYDAGGGRLKIDVFVAALPSRSCPLRIAVHSSTSPDARRLALTDPGDADLHLTDIDNHLRKMGLSSVLAAYCAGDVVALIKRDAENIRATQRELQRRANTDAPPAPGVGAGG*
Ga0075433_1006157033300006852Populus RhizosphereVKGPRDAIVWEDGPQDRNYAYHKVAIYDAGGGRLKIDVFVAALPSRSCPLRIAVHSSTSPDARRLALTDPGDADLHLTDIDNHLRKMGLSSVLAAYCAGDVVALIKRDAENIRATQRELQRRANADAPPAPGVGAGG*
Ga0075433_1010359023300006852Populus RhizosphereVKKPLDPIVWEDGPLDQGCAYHKVATYDAGGGRLKIDVFVKPSAAATTCPVRIAVHSSKSPDPQRFTLADPGDADSHLTDIDQRLKNLGLPAVLAAYCAADVVALIKREAVSIRATQRELEGLV*
Ga0075433_1037161923300006852Populus RhizosphereVKGPGDAIVWEDGPHDRNYAYHKVATYDAGGGRLKIDVFVAASPSRSCPLRIAVHSSTSPDAQRLALTDPGDADLHLTDIDNRLRKMGLPSVLAAYCAGDVVALIKRDAENIRATQRELQRRAITDAPPGPGVGVTG*
Ga0075425_10141619723300006854Populus RhizosphereMVWADGSRVPGHGYHKVATYDAGAGRLQIEVFVAPSASAPCPVRITVHSSRSVDAQRFALSDPADADSHLIAIDERLKKIGLPAILAAYCAGDVVALIKR
Ga0075425_10194256123300006854Populus RhizosphereVKGPGDAIVWEDGPHDRNYAYHKVATYDAGGGRLKIDVFVAASPSRSCPVQIAVHSSTSPDAQRLALTDPGDADLHLTDIDNRLRKMGLPSVLAAYCAGDVVALIKRDAENIRATQRELQRRAITEAPPGPGVGVGG*
Ga0075425_10223798113300006854Populus RhizosphereVKKPLDPIVWEDGPLDQGCAYHKVATYDAGGGRLKIDVFVKPSAAATCPVRIAVHSSKSPDPQRFTLADPGDADSHLTDIDQRLKNLGLPAVLAAYCAADVVALIKREAVSIRATQRE
Ga0075426_1065141723300006903Populus RhizosphereVKRPVDAIVWEDGPHDRDCAYHKVATYDADGGRLKIDVFVSASPSLSCPLRIAVHSSKSPDPQRLALSDPGDADLHLTDIDNRLKKLGLPSVLAAYCAGDVVALIKRDAENIRATQRELQGRRR*
Ga0075424_10123363523300006904Populus RhizosphereVKGPGDAIVWEDGPHDRNYAYHKVATYDAGGGRLKIDVFVAASPSRSCPLRIAVHSSTSPDAQRLALTDPGDADLHLTDIDNRLRKMGLPSVLAAYCAGDVVALIKRDAENIRATQRELQRRAITDAPPGPGVGARG*
Ga0075435_10118351013300007076Populus RhizosphereDAIVWEDGPHDRDYAYHKVAIYDVGGGRLKIDVFVAASPSRSCPLRIAVHSSTSPDAQRLALTDPGDADLQLTDIDNRLRKMGLPSVLAAYCAGDVVALIKRDAENIRATQRELQRRAITGAPPGPGVGVTG*
Ga0066710_10048752323300009012Grasslands SoilVWEDGPHNRDCAYHKVATYDADGGRLKIDVFVTATASPTCPVRIAVHSSKSPDPQRLALTDPGDADLHLSDIDDRLKKLGLPSILAAYCAGDVVALIKRDAENIRATQRELAARGRFDGARG
Ga0066710_10435900513300009012Grasslands SoilVKGHGDAIVWEDGPHDRDYAYHKVATYDAGNGRLKIDVFVAASPSRSCPLRIAVHSSTSPDAQRLALTDPGDADLHLTDIDNHLRKMGLPSVLAAYCAGDVVALIKRDAENIRATQRELQRRAITDAPPGLGVRG
Ga0111539_1026528323300009094Populus RhizosphereVKGPRDAIVWEDGPQDRNYAYHKVAIYDAGGGRLKIDVFVAAAPSRSCPLRIAIHSTTSPDARRLALTDPGDADLHLTDIDNHLRKMGLSSVLAAYCAGDVVALIKRDAENIRATQRELQRRANADAPPAPGVGAGG*
Ga0075418_1306409913300009100Populus RhizosphereVKGPGDAIVWEDGPQDRNYAYHKVATYDAGGGRLKIDVFVAASPSRSCPLRIAVHSSTSPDARRLTLSDPGDADLHLTDIDNHLRKMGLSSVLAAYCAGDVVALIKRDAENIRATQRE
Ga0105247_1118513813300009101Switchgrass RhizospherePGDAIVWEDGPHDHDYAYHKVATYDAGGGRLKIDVFVAAAPSRSCPLRIAVHSTTSPDAQRLALTDPGDADLHLTDIDNRLRKMGLPSVLAAYCAGDVVALIKRDAENIRATQRELQRRAITDAPPGPGLGARG*
Ga0114129_1000096143300009147Populus RhizosphereVKKPLDPIVWEDGPLVQGCAYHKVATYDAGGGRLKIDVFVKPSAAATCPVRIAVHSSKSPDPQRFTLADPGDADSHLTDIDRRLKNLGLPAVLAAYCAADVVALIKREAVSIRATQRELEGLV*
Ga0114129_1001966923300009147Populus RhizosphereVKGPGEAIVWEEGPHDRDYAYHKVATYDVGSGRLKIHVSVAASPSRSCPLRIAVHSSTSPDAQRLTLTDPGDADLHLADIDNRLKKLGLPSVLAAYCAGDVVALIKRDAENIRATQRELQRRAIIDAPPGPGLGAGG*
Ga0105243_1017871133300009148Miscanthus RhizosphereVKGPGDAIVWEDGPHDHDYAYHKVATYDAGGGRLKIDVFVAAAPSRSCPLRIAVHSTTSPDGQRLALTDPGDADLHLTEIDNRLRKMGLPSVLAAYCAGDVVALIKRDAENIRATQRELQRRAIIGAP
Ga0111538_1033103213300009156Populus RhizosphereVKGPRDAIVWEDGPQDRNYAYHKVAIYDAGGGRLKIDVFVAALPSRSCPLRIAVHSSTSPDARRLALTDPGDADLHLTDIDNHLRKMGLSSVLAAYCAGDVVALIKRDAENIRATQRELQRRANTDAPPAPGVGAGG*
Ga0111538_1058081413300009156Populus RhizosphereILAVVKGPGDAIVWEDGPHNRDYAYHKVATYGAGGGRLQIDVFVAASPARPCPLRIAVHNSTSPDAQHLALTDPGDADLHLAEIDNRLKKLGLPSVLAAYCAGDIVALIKRDAENIRATQRELQRRAITDPLPGPGLGAGARG*
Ga0075423_1217931713300009162Populus RhizosphereKVATYDAGGGRLKIDVFVAASPSRPCPLRIAVHSSTSPDAQRLALTDPGDADLHLTDIDNRLRKMGLPSVLAAYCAGDVVALIKRDAENIRATQRELQRRAITDTGPGLGARG*
Ga0126382_1040507023300010047Tropical Forest SoilVKGPGDPIVWEDGPHDRDYAYHKVATYDAAGGRLKIEVFVAASPSRPCPLRIAVHSSASPDARRLTLSDPGDADLHLSDIDHHLRKMGLSSVLAAYCAGDVVALIKRDAENIRATQRELQRRANTDAPPAPGVGAGG*
Ga0126376_1257152913300010359Tropical Forest SoilRYYAYHKVATYDAAGGRLKIEVFVAASPSRSCPLRIAVHSSLSPDARRLALADPGDADLHLSDIDHHLRKMGLSSVLAAYCAGDVVALIKRDAENIRATQRELQRRANTDAPPGPGVGVRGWAERQE*
Ga0126377_1052986623300010362Tropical Forest SoilVKGPGDAIVWEDGPQDRNYAYHKVATYDAGGGRLKIDVFVAALPSRSCPLRIAVHSSTSPDARRLALTDPGDADLHLTDIDNHLRKMGLSSVLAAYCAGDVVALIKRDAENIRATQRELQRRANTDAPPAPSVGAGG*
Ga0136847_1291766823300010391Freshwater SedimentMDSIVWEEGPHDRGCPYHKVAMYDADGGRLKIDVFVMPSASTTCPVRITVNSSKSPDPQRLALSDPGDADAHLTAIDDRLKKLGLPAVLAAYCAADVVALIKREADSIRATQRELEARSR
Ga0134122_1072583123300010400Terrestrial SoilVKGPGDVIVWEDGPHDHAYAYHKVATYDAGGGRLKIDVFVAASPSRSCPLRIAVHSSTSPDAQRLTLTDPGDADLHLADIDNRLKKLGLPSVLAAYCAGDIVALIKRDAENIRATQRELQRRAITDAPGGPVIGAGG*
Ga0134123_1202679313300010403Terrestrial SoilVKGPGDAIVWEDGPHNRDYAYHKVATYGAGGGRLQIDVFVAASPARPCPLRIAVHNSTSPDAQHLALTDPGDADLHLAEIDNRLKKLGLPSVLAAYCAGDIVALIKRDAENIRATQRE
Ga0137391_1099578213300011270Vadose Zone SoilSFFFVSFGGDDIGFGDSCDRNLPGLADTTGMKTPGDSIVWEDGPRDQGYAYHKVARYDAAGDRLKIEVFVMPSASAACPVRVTVSSSASPDTQRLALSDPNDADAHLTDIDDRLKKLGLPAVLAAYCAGDVVALIKREADSIRATQREMEERWSR*
Ga0137463_104697023300011444SoilVKGPGDAIVWEDGPQDHDYAYHKVATYDAGGGRLKIDVFVAASPSRSCPLRIAVHSSTSPDAQRLTLTDPGDADLHLADIDNRLKKLGLPSVLAAYCAGDVVALIKRDAENIRATQRELQRRAINDAPGGPVIGAGG*
Ga0137399_1105801713300012203Vadose Zone SoilVKTPSDRIVWEDGPHDPGCGYHKVATYNANDGRLQIDVFVTHSASAHCPVRIAVHSSKSSDPQCFVLSDPGDADAHLTDIDARLKKLGLPAVLAAYCAGDVVALIKRETDSI
Ga0137374_1042457523300012204Vadose Zone SoilVTEIRVIWQILPVVKTPGDSIVWEDGPQDEGCAYHKVATYEAGGGRLKIDVFVTASASATCPVRIAVHSSKSPDPQRLALRDPGDADSHLSAIDDRLKKLGLPSVLAAYCAGDVVALIKRDAENIRATQRDLQARNR*
Ga0137370_1091475523300012285Vadose Zone SoilVIWQILPVVKTPGDSIVWEDGPQDEGCAYHKVATYEAGGGRLKIDVFVTASASATCPVRIAVHSSKSPDPQRLALSDPGDADSHLTAIDDRLKKLGLPSVLAAYCAGDVVALIKRDA
Ga0137366_1021989123300012354Vadose Zone SoilVTEIRVIWQILPVVKTPGDSIVWEDGPQDEGCAYHKVATYEAGGGRLKIDVFVTASASATCPVRIAVHSSKSPDPQRLALSDPGDADSHLTAIDDRLKKLGLPSVLAAYCAGDVVALIKRDAENIRATQRDLQARNR*
Ga0137369_1044848623300012355Vadose Zone SoilVTEIRVIWQILPVVKTPGDSIVWEDGPQDEGCAYHKVATYEAGGGRLKIDVFVTASASATCPVRIAVHSSKSPDPQRLALSDPGDADSHLSAIDDRLKKLGLPSVLAAYCAGDVVALIKRDAE
Ga0157332_104854523300012511SoilVKGPGDAIVWEDGPQDHVYAYHKVATYDAGGGRLKIDVFVAAAPSRSCPLRIAVHSTTSPDGQRLALTDPGDADLHLTEIDNRLRKMGLPSVLAAYCAGDVVALIKRDAENIRATQRELQRRAITDAP
Ga0137394_1086721213300012922Vadose Zone SoilVKTPSDRIVWEDGPHDPGCGYHKVATYNANDGRLQIDVFVTHSASAHCPVRIAVHSSKSSDPQCFVLSDPGDADAHLTDIDARLKKLGLPAVLAAYCAGDVVALIKRETDSIRATQRELQARR
Ga0137410_1122500923300012944Vadose Zone SoilVKTVPDSSVWEDGPHDQGCAYHKVAVYDAVGGRLKIDVFVRRSASAPCPVQIAVHSSASPDPQQFALSDPGDADSHLTDIDERLKKLGLPAVLAAYCAGDIVALIKREADSIRATQRELQARW*
Ga0164303_1047948223300012957SoilVKGPGDAIVWEDGPQDHVYAYHKVATYDAGGGRLKIDVFVAAAPSRSCPLRIAVHSTTSPDGQRLALTDPGDADLHLTEIDNRLRKMGLPSVLAAYCAGDVVALIKRDAENI
Ga0164299_1011923723300012958SoilVKGPGDAIVWEDGPQDHVYAYHKVATYDAGGGRLKIDVFVAAAPSRSCPLRIAVHSTTSPDGQRLALTDPGDADLHLTEIDNRLRKMGLPSVLATYCAGDVVALIKRDAENIRATQRELQRRAIIGAPPGPGVGAGG*
Ga0164301_1030617523300012960SoilVKGPGDAIVWEDGPQDHVYAYHKVATYDAGGGRLKIDVFVAAAPSRSCPLRIAVHSTTSPDGQRLALTDPGDADLHLTEIDNRLRKMGLPSVLAAYCAGDVVALIKRDAENIRATQRELQRRAIIGAPPGPGVGAGG*
Ga0157378_1110618223300013297Miscanthus RhizosphereVKGPGDAIVWEDGPHNRDYAYHKVATYDAAGGRLKIDVFVAASPSRPCPLRIAVHSSTSPDAQRLALTDPGDADLHLTDIDNRLRKMGLPSVLAAYCAGDVVALIKRDAENIRATQRELQRRAITDAPGGPVIGAGG*
Ga0157380_1138064713300014326Switchgrass RhizosphereVKGPGDAIVWEDGPHNRDYAYHKVATYDAGGGRVKIDVFVAASPSRSCPLRIAVHSSTSPDAQRLALTDPGDADLHLTDIDNRLRKMGLPSVLAAYCAGDVVALIKRDAENIRATQRELQRRAITDAPPGPGLGARG*
Ga0157377_1075709223300014745Miscanthus RhizosphereVKGPGDAIVWEDGPHDHDYAYHKVATYDAGGGRLKIDVFVAAAPSRSCPLRIAVHSTTSPDAQRLALTDPGDADLHLTDIDNRLSKMGLPSVLAAYCAGDVVALIKRDAENIRATQRELQRRAITGAPPGPGVGVTG*
Ga0157379_1006047643300014968Switchgrass RhizosphereVKGPGDAIVWEDGPHDHDYAYHKVATYDAGGGRLKIDVFVAAAPSRSCPLRIAVHSTTSPDAQRLALTDPGDADLHLTDIDNRLRKMGLPSVLAAYCAGDVVALIKRDAENIRATQRELQRRA
Ga0157376_1012838413300014969Miscanthus RhizosphereVKGPGDAIVWEDGPHDHDYAYHKVATYDAGGGRLKIDVFVAAAPSRSCPLRIAVHSTTSPDAQRLALTDPGDADLHLTDIDNRLRKMGLPSVLAAYCAGDVVALIKRD
Ga0132258_1036258333300015371Arabidopsis RhizosphereVKGTGDAIVWEDGPHDRDCAYHKVAAYDVGGGRLKIDVFVAATPSRSYPLRIALHSSTSPDTQRLTLTDPGDADLHLTDIDNRLKKLGLSSVLAAYCAGDVVALIKRDAENIRATQRELQRRAVTDRPPGPGVGATG*
Ga0132258_1308761113300015371Arabidopsis RhizosphereYAYHKVATYDAGGGRLKIDVFVAAAPSRSCPLRIAVHSTTSPDAQRLALTDPGDADLHLTDIDNRLRKMGLPSVLAAYCAGDVVALIKRDAENIRATQRELQRRAITDAPPGPGLGARG*
Ga0132257_10195611523300015373Arabidopsis RhizosphereVKGPGDAIVWEDGPQDHVYAYHKVATYDAGGGRLKIDVFVAASPSRSCPLRIAVHSTTSPDGQRLALTDPGDADLHLTEIDNRLRKMGLPSVLAAYCAGDVVALIKRDAENIRATQRELQRRAIIGAPPGPGVGAGG*
Ga0132255_10019901923300015374Arabidopsis RhizosphereVKGTGDAIVWEDGPHDRDCAYHKVAAYDVGGGRLKIDVFVAATPSRSYPLRIALHSSTSPDAQRLTLTDPGDADLHLTDIDNRLKKLGLSSVLAAYCAGDVVALIKRDAENIRATQRELQRRAVTDRPPGPGVGATG*
Ga0184611_100955123300018067Groundwater SedimentVKGPGDAIVWEDGPHDHAYAYHKVATYDAGGGRLKIDVFVAASPSRSCPLRIAVHSSTSPDAQRMTLTDPGDADLHLADIDTRLKKLGLPSVLAAYCAGDVVALIKRDAENIRATQRELQRRAITDAPPGPGIGVTG
Ga0184635_1023108713300018072Groundwater SedimentVKGPGDAIVWEDGPHDRDYAYHKVATYDAGGGRLKIDVFVAASPSRSCPLRIAVHSSTSPDAQRLTLTDPGDADLHLADIDTRLKKLGLPSVLAAYCAGDVVALIKRDAENIRATQRELQRRAITDAPGGPVVGAGG
Ga0184624_1000602833300018073Groundwater SedimentVKGPGDAIVWEDGPHDHAYAYHKVATYDAGGGRLKIDVFVAASPSRSCPLRIAVHSSTSPDAQRMTLTDPGDADLHLADIDNRLKKLGLPSVLAAYCAGDVVALIKRDAENIRATQRELQRRAITDAPGGPVIGAGG
Ga0193697_100364043300020005SoilVKGPGDAIVWEDGPHDRAYAYHKVATYDAGGGRLKIDVFVAASPSRSCPLRIAVHSSTSPEAQRLTLTDPGDADLHLADIDNRLKKLGLPSVLAAYCAGDVVALIKRDAENIRATQRELQRRAITGAPPGPGVGASS
Ga0210408_1018059723300021178SoilMKTPGDSIVWEDGPRDRGYAYHKVAWYDAAGDRLKIEVFVMPSASAACPVRVTVSSSASPDTQRLALNDPNDADAHLTDIDDRLKKLGLPAVLAAYCAGDVVALIKREADSIRATQRELVERWSR
Ga0207697_1013266313300025315Corn, Switchgrass And Miscanthus RhizosphereVKGPGDAIVWEDGPHNRDYAYHKVATYGAGGGRLQIDVFVAASPARPCPLRIAVHNSTSPDAQHLALTDPGDADLHLAEIDNRLKKLGLPSVLAAYCAGDIVALIKRDAENIRATQRELQ
Ga0207680_1058028813300025903Switchgrass RhizosphereVKGPGDAIVWEDGPHNRDYAYHKVATYGAGGGRLQIDVFVAASPARPCPLRIAVHNSTSPDAQHLALTDPGDADLHLAEIDNRLKKLGLPSVLAAYCAGDIVALIKRDAENI
Ga0207662_1031746923300025918Switchgrass RhizosphereVKGPGDAIVWEDGPHNRDYAYHKVATYGAGAGRLQIDVFVAASPARPCPLRIAVHNSTSPDAQHLALTDPGDADLHLADIDNRLKKLGLPSVLAAYCAGDIVALIKRDAENIRATQRELQRRAITDPPPGPGVGVTG
Ga0207646_1046188113300025922Corn, Switchgrass And Miscanthus RhizosphereLLRLSDTTVVKRLGDAIVWEDGPQNQGFAYHKVATYDADGGRLKIDVFVTASPSLPCPLRIAVHSSKSPDPQRLALTDPGDADLHLIDIDSRLRKLGLPSILAAYCAGDVVALIKRDAENIRATQRELARRAAGPRTT
Ga0207681_1002243623300025923Switchgrass RhizosphereVKGPGDAIVWEDGPHNRDYAYHKVATYGAGAGRLQIDVFVAASPARPCPLRIAVHNSTSPDAQHLALTDPGDADLHLAEIDNRLKKLGLPSVLAAYCAGDIVALIKRDAENIRATQRELQRRAITDPLPGPGLGAGARG
Ga0207659_1045326123300025926Miscanthus RhizosphereVKGPGDAIVWEDGPHDRNYAYHKVATYDAGGGRLKIDVFVAASPSRSCPLRIAVHSSTSPNAQRLALTDPGDADLHLTDIDNRLRKMGLPSVLAAYCAGDVVALIKRDAENIRATQRELQRRAITDAPPGPGLGARG
Ga0207701_1019051823300025930Corn, Switchgrass And Miscanthus RhizosphereVKGPGDAIVWEDGPHNRDYAYHKVATYGAGGGRLQIDVFVAASPARPCPLRIAVHNSTSPDAQHLALTDPGDADLHLAEIDNRLKKLGLPSVLAAYCAGDIVALIKRDAENIRATQRELQRRAMTDPLPGPGLGAGARG
Ga0207644_1037047713300025931Switchgrass RhizosphereVKGPGDAIVWEDGPHDHDYAYHKVATYDAGGGRLKIDVFVAAAPSRSCPLRIAVHSTTSPDAQRLALTDPGDADLHLTDIDNRLRKMGLPSVLAAYCAGDVVALIKRDAENIRATQRELQRRAITDAPPGPGLGARG
Ga0207669_1075043813300025937Miscanthus RhizosphereHAYAYHKVATYDAGGGRLKIDVFVAASPSRSCPLRIAVHSSTSPDAQRLTLTDPGDADLYLADIDNRLKKLGLPSVLAAYCAGDVVALIKRDAENIRATQRELQRRAITDAPGGPVIGAG
Ga0207668_1061307323300025972Switchgrass RhizosphereVKGPGDAIVWEDGPHNRDYAYHKVATYGAGGGRLQIDVFVAASPARPCPLRIAVHNSTSPDAQHLALTDPGDADLHLAEIDNRLKKLGLPSVLAAYCAGDIVALIKRDAENIRATQRELQRRAITDPLPGPGLGAGARG
Ga0207641_1001299623300026088Switchgrass RhizosphereVKGPGDAIVWEDGPHDRNYAYHKVATYDAGGGRLKIDVFVAASPSRSCPLRIAVHSSTSPDAQRLALTDPGDADLHLTDIDNRLRKMGLPSVLAAYCAGDVVALIKRDAENIRATQRELQRRAITGAPPGPGVGVTG
Ga0207641_1104130913300026088Switchgrass RhizosphereVKGPGDAIVWEDGPHDHDYAYHKVATYDAGGGRLKIDVFVAAAPSRSCPLRIAVHSTTSPDAQRLALTDPGDADLHLTDIDNRLRKMGLPSVLAAYCAGDVVALIKRDAENIRATQRELQRRAITDAPPGPGV
Ga0207675_10061257433300026118Switchgrass RhizosphereNYAYHKVATYDAGGGRLKIDVFVAASPSRSCPLRIAVHSSMSPEAQRLTLTDPGDADLHLADIDNRLKKLGLPSVLAAYCAGDVVALIKRDAENIRATQRELQATNRRSGV
Ga0209811_1000534043300027821Surface SoilVKGPGDAIVWEDGPQDHVYAYHKVATYDAGGGRLKIDVFVAAAPSRSCPLRIAVHSTTSPDAQRLALTDPGDADLHLTDIDNRLRKMGLPSVLAAYCAGDVVALIKRDAENIRATQRALQRRAIIGAPPGPGPDLLTS
Ga0209814_1024887923300027873Populus RhizosphereVKKPLDPIVWEDGPLDQGCAYHKVATYDAGGGRLKIDVFVKPSAAATCPVRIAVHSSKSPDPQRFTLADPGDADSHLTDIDQRLKNLGLPAVLAAYCAADVVALIKREAVSIRATQRELEGLV
Ga0307473_1031601923300031820Hardwood Forest SoilVKGPGDAIVWEDGPHDRNYAYHKVATYDAGGGRLKIDVFVAASPSRSCPLRIAVHSSTSPDAQRLALTDPGDADLHLIDIDNRLRKMGLPSVLAAYCAGDVVALIKRDAENIRATQRELQRRANTADAPPSPGVGARG
Ga0310892_1098245713300031858SoilVKGPGDAIVWEDGPQDHVYAYHKVATYDAGGGRLKIDVFVAAAPSRSCPLRIAVHSTTSPDGQRLALTDPGDADLHLTEIDNRLRKMGLPSVLAAYCAGDVVALIKRDAENIRA
Ga0307406_1209424313300031901RhizosphereVWEDGPHDRGCAYHKVATYDAAGGHLKIDVFVSASPSPPCPVRIAVHSSKSRDPQRLALTDPGDADLHLTDIDDRLKKLGLPSVLAAYCAGDVVALIKRDAESIRATQRELQRRRRRDEA
Ga0307472_10019453823300032205Hardwood Forest SoilVKGPGDAIVWEDGPQDRNYAYHKVATYDAGGGRLKIDVFVAAAPSRSCPLRIAVHSATSPDAQRLALTDPGDADLHLTDIDNRLRKMGLPSVLAAYCAGDVVALIKRDAENIRATQRELQRRAITDVPPGLGAS


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.