Metagenome / Metatranscriptome Family F101118

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F101118
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	87 residues
Representative Sequence	MQERDDAFAIRIGLLAVVAFMSWPVWLAIVAGQHQFTTAVGLSALVPLALTLMVPAFAFHAGGHFHRGLVRLEHRLHIDSFIDHHLHRHA
Number of Associated Samples	95
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	89.22 %
% of genes near scaffold ends (potentially truncated)	45.10 %
% of genes from short scaffolds (< 2000 bps)	92.16 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (62.745 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (20.588 % of family members)
Environment Ontology (ENVO)	Unclassified (40.196 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (45.098 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 86.67% β-sheet: 0.00% Coil/Unstructured: 13.33%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF00571	CBS	45.10
PF11706	zf-CGNR	30.39
PF01520	Amidase_3	6.86
PF13416	SBP_bac_8	3.92

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0860	N-acetylmuramoyl-L-alanine amidase	Cell wall/membrane/envelope biogenesis [M]	6.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	62.75 %
Unclassified	root	N/A	37.25 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	62.75 %
Unclassified	root	N/A	37.25 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	62.75 %
Unclassified	root	N/A	37.25 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.25 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	30.39 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.25 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	24.51 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1.96 %
Candidatus Eremiobacterota	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Eremiobacterota	0.98 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.25 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	6.86 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3.92 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1.96 %
Candidatus Eremiobacteriia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Eremiobacterota → Candidatus Eremiobacteriia	0.98 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.25 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → environmental samples	3.92 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2.94 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.96 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	1.96 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1.96 %
Candidatus Eremiobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Eremiobacterota → Candidatus Eremiobacteriia → Candidatus Eremiobacterales	0.98 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.25 %
uncultured Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → environmental samples → uncultured Thermoleophilia bacterium	3.92 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	2.94 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.96 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.96 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1.96 %
Candidatus Eremiobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Eremiobacterota → Candidatus Eremiobacteriia → Candidatus Eremiobacterales → Candidatus Eremiobacteraceae	0.98 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.25 %
uncultured Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → environmental samples → uncultured Thermoleophilia bacterium	3.92 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	2.94 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.96 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.96 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1.96 %
Candidatus Eremiobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Eremiobacterota → Candidatus Eremiobacteriia → Candidatus Eremiobacterales → Candidatus Eremiobacteraceae → Candidatus Eremiobacter	0.98 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.25 %
uncultured Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → environmental samples → uncultured Thermoleophilia bacterium	3.92 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	2.94 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.96 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.96 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1.96 %
unclassified Candidatus Eremiobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Eremiobacterota → Candidatus Eremiobacteriia → Candidatus Eremiobacterales → Candidatus Eremiobacteraceae → Candidatus Eremiobacter → unclassified Candidatus Eremiobacter	0.98 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.25 %
uncultured Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → environmental samples → uncultured Thermoleophilia bacterium	3.92 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	2.94 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.96 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.96 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1.96 %
Candidatus Eremiobacter sp. RRmetagenome_bin22	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Eremiobacterota → Candidatus Eremiobacteriia → Candidatus Eremiobacterales → Candidatus Eremiobacteraceae → Candidatus Eremiobacter → unclassified Candidatus Eremiobacter → Candidatus Eremiobacter sp. RRmetagenome_bin22	0.98 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459015\|G1E9HNB16J3FN4	Not Available	521	Open in IMG/M
3300000956\|JGI10216J12902_124478305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	500	Open in IMG/M
3300002568\|C688J35102_117793121	Not Available	506	Open in IMG/M
3300003990\|Ga0055455_10250574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	562	Open in IMG/M
3300004801\|Ga0058860_11743272	Not Available	538	Open in IMG/M
3300005162\|Ga0066814_10086479	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300005165\|Ga0066869_10102869	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	574	Open in IMG/M
3300005169\|Ga0066810_10091441	Not Available	661	Open in IMG/M
3300005334\|Ga0068869_100528706	All Organisms → cellular organisms → Bacteria	988	Open in IMG/M
3300005335\|Ga0070666_11484826	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300005344\|Ga0070661_100598820	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300005364\|Ga0070673_100211216	All Organisms → cellular organisms → Bacteria	1676	Open in IMG/M
3300005365\|Ga0070688_100141942	All Organisms → cellular organisms → Bacteria	1633	Open in IMG/M
3300005439\|Ga0070711_101000228	Not Available	717	Open in IMG/M
3300005457\|Ga0070662_101354286	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300005459\|Ga0068867_100508894	All Organisms → cellular organisms → Bacteria	1036	Open in IMG/M
3300005459\|Ga0068867_101691013	Not Available	593	Open in IMG/M
3300005549\|Ga0070704_100580808	All Organisms → cellular organisms → Bacteria	983	Open in IMG/M
3300005553\|Ga0066695_10461855	Not Available	782	Open in IMG/M
3300005618\|Ga0068864_100666360	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1014	Open in IMG/M
3300005718\|Ga0068866_10275740	All Organisms → cellular organisms → Bacteria	1040	Open in IMG/M
3300005718\|Ga0068866_11313009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	526	Open in IMG/M
3300005843\|Ga0068860_100404334	All Organisms → cellular organisms → Bacteria	1351	Open in IMG/M
3300005874\|Ga0075288_1016959	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300005885\|Ga0075284_1006641	All Organisms → cellular organisms → Bacteria	1237	Open in IMG/M
3300005887\|Ga0075292_1067362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	536	Open in IMG/M
3300005890\|Ga0075285_1006763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Eremiobacterota → Candidatus Eremiobacteriia → Candidatus Eremiobacterales → Candidatus Eremiobacteraceae → Candidatus Eremiobacter → unclassified Candidatus Eremiobacter → Candidatus Eremiobacter sp. RRmetagenome_bin22	1224	Open in IMG/M
3300006046\|Ga0066652_100176830	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1816	Open in IMG/M
3300006058\|Ga0075432_10166862	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300006572\|Ga0074051_11697636	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300006576\|Ga0074047_12006382	Not Available	623	Open in IMG/M
3300006580\|Ga0074049_12898689	Not Available	688	Open in IMG/M
3300006604\|Ga0074060_12039316	All Organisms → cellular organisms → Bacteria	1054	Open in IMG/M
3300006806\|Ga0079220_11035902	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	656	Open in IMG/M
3300006954\|Ga0079219_10393870	Not Available	914	Open in IMG/M
3300007076\|Ga0075435_100508186	Not Available	1042	Open in IMG/M
3300009094\|Ga0111539_12269800	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	630	Open in IMG/M
3300009098\|Ga0105245_11274375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	784	Open in IMG/M
3300009148\|Ga0105243_11391350	Not Available	722	Open in IMG/M
3300009156\|Ga0111538_14011617	Not Available	509	Open in IMG/M
3300010329\|Ga0134111_10490812	Not Available	538	Open in IMG/M
3300010373\|Ga0134128_10190517	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2313	Open in IMG/M
3300012355\|Ga0137369_11152028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	503	Open in IMG/M
3300012507\|Ga0157342_1047066	Not Available	595	Open in IMG/M
3300012951\|Ga0164300_10296953	Not Available	843	Open in IMG/M
3300012958\|Ga0164299_11231935	Not Available	568	Open in IMG/M
3300012960\|Ga0164301_10036981	All Organisms → cellular organisms → Bacteria	2391	Open in IMG/M
3300012961\|Ga0164302_10097091	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1617	Open in IMG/M
3300012984\|Ga0164309_10500565	All Organisms → cellular organisms → Bacteria	930	Open in IMG/M
3300012986\|Ga0164304_11246176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	603	Open in IMG/M
3300012988\|Ga0164306_11854406	Not Available	524	Open in IMG/M
3300013306\|Ga0163162_10492977	All Organisms → cellular organisms → Bacteria	1356	Open in IMG/M
3300013307\|Ga0157372_13293659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → environmental samples → uncultured Thermoleophilia bacterium	514	Open in IMG/M
3300014497\|Ga0182008_10967347	Not Available	505	Open in IMG/M
3300014969\|Ga0157376_10290390	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1544	Open in IMG/M
3300015371\|Ga0132258_12613369	All Organisms → cellular organisms → Bacteria	1261	Open in IMG/M
3300015371\|Ga0132258_13239400	All Organisms → cellular organisms → Bacteria	1122	Open in IMG/M
3300015372\|Ga0132256_100078708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3147	Open in IMG/M
3300015372\|Ga0132256_100813938	All Organisms → cellular organisms → Bacteria	1050	Open in IMG/M
3300019269\|Ga0184644_1356833	Not Available	593	Open in IMG/M
3300020069\|Ga0197907_10670288	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	711	Open in IMG/M
3300020069\|Ga0197907_11398512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → environmental samples → uncultured Thermoleophilia bacterium	683	Open in IMG/M
3300020070\|Ga0206356_10050704	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1240	Open in IMG/M
3300020080\|Ga0206350_10681442	Not Available	531	Open in IMG/M
3300021078\|Ga0210381_10238814	Not Available	643	Open in IMG/M
3300021951\|Ga0222624_1134391	Not Available	512	Open in IMG/M
3300022467\|Ga0224712_10310575	Not Available	739	Open in IMG/M
3300025321\|Ga0207656_10304105	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	790	Open in IMG/M
3300025552\|Ga0210142_1124471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	510	Open in IMG/M
3300025899\|Ga0207642_10478343	Not Available	759	Open in IMG/M
3300025899\|Ga0207642_11135053	Not Available	506	Open in IMG/M
3300025903\|Ga0207680_10806318	Not Available	673	Open in IMG/M
3300025911\|Ga0207654_10679355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	739	Open in IMG/M
3300025933\|Ga0207706_10380764	All Organisms → cellular organisms → Bacteria	1224	Open in IMG/M
3300025934\|Ga0207686_10054157	All Organisms → cellular organisms → Bacteria	2512	Open in IMG/M
3300025934\|Ga0207686_11583005	Not Available	541	Open in IMG/M
3300025939\|Ga0207665_10906672	Not Available	699	Open in IMG/M
3300026009\|Ga0208530_1009664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → environmental samples → uncultured Thermoleophilia bacterium	715	Open in IMG/M
3300027909\|Ga0209382_10812883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	994	Open in IMG/M
3300028592\|Ga0247822_11938858	Not Available	505	Open in IMG/M
3300028708\|Ga0307295_10109623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	749	Open in IMG/M
3300028744\|Ga0307318_10224728	Not Available	651	Open in IMG/M
3300028791\|Ga0307290_10026690	All Organisms → cellular organisms → Bacteria	2035	Open in IMG/M
3300028802\|Ga0307503_10422666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	701	Open in IMG/M
3300028811\|Ga0307292_10023686	All Organisms → cellular organisms → Bacteria	2180	Open in IMG/M
3300028819\|Ga0307296_10338752	Not Available	821	Open in IMG/M
3300028872\|Ga0307314_10214021	Not Available	585	Open in IMG/M
3300028875\|Ga0307289_10005366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4974	Open in IMG/M
3300028884\|Ga0307308_10065394	All Organisms → cellular organisms → Bacteria	1716	Open in IMG/M
3300028889\|Ga0247827_10286015	All Organisms → cellular organisms → Bacteria	955	Open in IMG/M
3300030829\|Ga0308203_1034493	Not Available	719	Open in IMG/M
3300031081\|Ga0308185_1027470	Not Available	677	Open in IMG/M
3300031093\|Ga0308197_10363301	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	555	Open in IMG/M
3300031170\|Ga0307498_10041379	All Organisms → cellular organisms → Bacteria	1199	Open in IMG/M
3300031199\|Ga0307495_10164123	All Organisms → cellular organisms → Bacteria → Terrabacteria group	585	Open in IMG/M
3300031939\|Ga0308174_10311044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → environmental samples → uncultured Thermoleophilia bacterium	1245	Open in IMG/M
3300032074\|Ga0308173_10218027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1597	Open in IMG/M
3300032174\|Ga0307470_10689669	Not Available	777	Open in IMG/M
3300033433\|Ga0326726_10024192	All Organisms → cellular organisms → Bacteria	5280	Open in IMG/M
3300033502\|Ga0326731_1033574	All Organisms → cellular organisms → Bacteria	1225	Open in IMG/M
3300034664\|Ga0314786_194397	Not Available	500	Open in IMG/M
3300034668\|Ga0314793_135244	Not Available	545	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	63.73%
Host-Associated	Host-Associated	35.29%
Engineered	Engineered	0.98%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	58.82%
Plants	Host-Associated → Plants	34.31%
Aquatic	Environmental → Aquatic	4.90%
Human	Host-Associated → Human	0.98%
Solid Waste	Engineered → Solid Waste	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	56.86%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.59%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.73%
Freshwater	Environmental → Aquatic → Freshwater	2.94%
Marine	Environmental → Aquatic → Marine	1.96%
Peat	Environmental → Terrestrial → Peat	1.96%
Digestive System	Host-Associated → Human → Digestive System	0.98%
Grass	Engineered → Solid Waste → Grass	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.06%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.75%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.76%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.84%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.90%
Loam	Environmental → Terrestrial → Soil → Loam	4.90%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.94%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.96%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.96%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.98%
Composting	Engineered → Solid Waste → Grass → Composting	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.84%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.88%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.92%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.94%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.94%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.96%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.96%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.98%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.98%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.98%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	20.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	6.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	4.90%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	4.90%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.92%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.94%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.96%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.96%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.98%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.98%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.98%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.98%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.98%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.98%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459015	Litter degradation PV4	Engineered	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003990	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2	Environmental	Open in IMG/M
3300004801	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005874	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404	Environmental	Open in IMG/M
3300005885	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_80N_401	Environmental	Open in IMG/M
3300005887	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_403	Environmental	Open in IMG/M
3300005890	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_104	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006572	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006576	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012507	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.7.yng.070610	Host-Associated	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300019269	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020080	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021951	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025552	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026009	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_80N_401 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300030829	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_357 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031081	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_159 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033502	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF9FY SIP fraction	Environmental	Open in IMG/M
3300034664	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034668	Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4PV_03510630	2170459015	Switchgrass, Maize And Mischanthus Litter	MEGRDDAYAIRIGLLAVVAFMSWPVWLAIVAGQHTFTTAVALSALVPLALTLMVPAFAFHAGGHLHRGLARLEHRLHIDSFIDHHLHRH
JGI10216J12902_1244783051	3300000956	Soil	LGVIAFMSWPVWLAIVSGQREFTTGVALSALVPLTLTLMVPAFAFHAGGHFHRGLVRLEHRLHIDTFIDHHLHRHA*
C688J35102_1177931211	3300002568	Soil	MQERDDGYAIRVGLLAVIAFMSWPVWLAIVSGQHSFTTAVALSALVPLALTILLPAVAFHWGRWLHGGLLSLEHRLHIDSFIDHHLHRHA*
Ga0055455_102505742	3300003990	Natural And Restored Wetlands	MQGRDDAYAIRIGLLAVVAFMSWPVWLAIVSGQRTFTTAVGLSALVPLALTLMVPAFAFHAGGHMHRALARLEHRLHIDSFIDHHLHRHA*
Ga0058860_117432722	3300004801	Host-Associated	MQERDDAFAIRIGLLAVVAFMSWPVWLAIVAGQHQFTTAVGLSALVPLALTLMVPAFAFHAGGHFHRGLVRLEHRLHIDTFIDHHLHRHA*
Ga0066814_100864792	3300005162	Soil	MQERDDGYAIRVGLLAVIAFMSWPVWLAIVSGQRSFTMGVALSALVPLALTIMLPLVAFHAGARFHRRLVSLEHRLHIDGFIDRHLHPHG*
Ga0066869_101028691	3300005165	Soil	MQERDDGYAIRVGLLAVIAFMSWPVWLAIVSGQRSFTTGVALSALVPLALTIMLPLVAFHAGARLHRRVVSLEHRLHIDGFIDRHLHPHG*
Ga0066810_100914411	3300005169	Soil	MQERDDGYAIRVGLLAVVAFMSWPVWLAIVSGQHTFTTGVALSALVPLALTLMLPAVAFHAGRRMHNRLLSLEHRLHIDSFIDHHLH
Ga0068869_1005287062	3300005334	Miscanthus Rhizosphere	MQERDDAFAIRIGLLAVVAFMSWPVWLAIVAGQHQFTTAVGLSALVPLALTLMVPAFAFHAGGHFHRVVVRLEHRLHIDSFIDHHLHRHA*
Ga0070666_114848261	3300005335	Switchgrass Rhizosphere	MQERDDAFAIRIGLLAVVGFMSWPVWLAIVAGQHQFTTAVGLSALVPLALTLMVPAFAFHAGGHFHRGLVRLEHRLHID
Ga0070661_1005988203	3300005344	Corn Rhizosphere	MQERDDAFAIRIGLLAVVAFMSWPVWLAIVAGQHQFTTAVGLSALVPLALTLMVPAFAFHAGGHFHRGLVRLEHRLHIDS
Ga0070673_1002112163	3300005364	Switchgrass Rhizosphere	MQERDDAFAIRIGLLAVVGFMSWPVWLAIVAGQHQFTTAVGLSALVPLALTLMVPAFAFHAGGHFHRGVVRLEHRLHIDSFIDHHLHRHA*
Ga0070688_1001419421	3300005365	Switchgrass Rhizosphere	MQERDDAFAIRIGLLAVVGFMSWPVWLAIVAGQHQFTTAVGLSALVPLALTLMVPAFAFHAGGHFHRGLVRLEHRLHIDTFIDHHLHRHA*
Ga0070711_1010002281	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MQERDDGYAIRVGLLAVIAFMSWPVWLAIVSGQRSFTTGVALSALVPLGLTIMLPLVAFHAGARLHRRLVSLEHRLHIDGFIDR
Ga0070662_1013542861	3300005457	Corn Rhizosphere	MQERDDAFAIRIGLLAVVAFMSWPVWLAIVAGQHQFTMAVGLSALVPLALTLMVPAFAFHAGGHFHRGVVRLEHRLHIDSFIDHHLHRHA*
Ga0068867_1005088943	3300005459	Miscanthus Rhizosphere	MQERDDAFAIRIGLLAVVAFMSWPVWLAIVAGQHQFTTAVGLSALVPLALTLMVPAFAFHAGGHFHRGLVRLEHRLHIDSFIDHHLHRHA*
Ga0068867_1016910131	3300005459	Miscanthus Rhizosphere	MQERDDGYAIRVGLLAVIAFMSWPVWLAIVSGQRSFTTGVALSALVPLGLTIMLPLVAFHAGARLHRRLVSLEHRLHIDGFIDRHLHPHG*
Ga0070704_1005808083	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MQERDDAFAIRIGLLAVVAFMSWPVWLAIVAGQHQFTVAVGLSALVPLALTLMVPAFAFHAGGHFHRGLVRLEHRLH
Ga0066695_104618551	3300005553	Soil	MQERDDGYAIRVGLLAVIAFMSWPVWLAVVSGQHSFSTGVALSALVPLAFTIMLPAVAFHAGRRMHNRLLSLEHRLHI
Ga0068864_1006663603	3300005618	Switchgrass Rhizosphere	MQERDDAFAIRIGLLAVVGFMSWPVWLAIVAGQHQFTTAVGLSALVPLALTLMVPAFAFHAGGHFHRGLVRLEHRLHIDSFIDHHLHRHA*
Ga0068866_102757402	3300005718	Miscanthus Rhizosphere	MQERDDAFAIRIGLLAVVAFMSWPVWLAIVAGQHQFTTAVGLSALVPLALTLMVPAFAFHAGGHFHRGVVRLEHRLHIDSFIDHHLHRHA*
Ga0068866_113130091	3300005718	Miscanthus Rhizosphere	MQERDDGYAIRVGLLAVIAFMSWPVWLAIVSGQRSFTTGVALSALVPLGLTIMLPLVAFHAGARLHRRVVSLEHRLHIDGFIDRHLHPHG*
Ga0068860_1004043343	3300005843	Switchgrass Rhizosphere	MQERDDAFAIRIGLLAVVAFMSWPVWLAIVAGQHQFTTAVGLSALVPLALTLMVPALAFHAGGHFHRGVVRLEHRLHIDSFIDHHLHRHA*
Ga0075288_10169591	3300005874	Rice Paddy Soil	MQERDDAFAIRIGLLAVVAFMSWPVWLAIVAGQHEFTTAVGLSALVPLALTLMVPAFAFHAGGHMHRALARLEHRLH
Ga0075284_10066412	3300005885	Rice Paddy Soil	MQGRDDAYAIRIGLLAVVAFMSWPVWLAIVSGQHTFTTAVGLSALVPLALTLMVPAFAFHAGGHMHRALARLEHRLHIDSFIDHHLHRHA*
Ga0075292_10673622	3300005887	Rice Paddy Soil	DDAFAIRIGLLAVVAFMSWPVWLAIVAGQHEFTTAVGLSALVPLALTLMVPAFAFHAGGHFHRGLVRLEHRLHIDSFIDHHLHRHA*
Ga0075285_10067632	3300005890	Rice Paddy Soil	MQERDDAFAIRIGLLAVVAFMSWPVWLAIVAGQHQFTTAVGLSALVPLALTLMVPAFAFHAGGHFHRGLVRLERRLHIDSFIDHHLHRHA*
Ga0066652_1001768303	3300006046	Soil	MQERDDGYAIRVGLLAVIAFMSWPVWLAVVSGQHSFSTGVALSALVPLAFTIMLPAVAFHAGRRMHNRLLSLEHRLHIDSFIDHHLHRHA*
Ga0075432_101668623	3300006058	Populus Rhizosphere	MQERDDAFAIRIGLLAVVGFMSWPVWLAIVAGQHQFTTAVGLSALVPLALTLMVPAFAFHAGGHFHRGLVRLEH
Ga0074051_116976362	3300006572	Soil	MQERDDGYAIRVGLLAVVAFMSWPVWLAIVSGQHTFTTGVALSALVPLALTLMLPAVAFHAGRRMHNRLLSLEHRLHIDSFIDHHLHRHA*
Ga0074047_120063821	3300006576	Soil	MQERDDGYAIRVGLLAVIAFMSWPVWLAIVSGQHSFTTGVALSALVPLALTIMLPLVAFHAGARLHRRVVSLEHRLHIDGFIDRHLHPHG*
Ga0074049_128986891	3300006580	Soil	MQERDDGYAIRVGLLAVVAFMSWPVWLAIVSGQHTFTTGVALSALVPLALTLMLPAVAFHAGRRMHNRLLSLEHRLHIDSFIDHHLHRH
Ga0074060_120393163	3300006604	Soil	MQERDDGYAIRVGLLAVIAFMSWPVWLAIVSGQRSFTMGVALSALVPLALTIMLPLVAFHAGARFHRRLVSLEHRLHID
Ga0079220_110359021	3300006806	Agricultural Soil	MQERDDAFAIRIGLLGVVAFMSWPVWLAIVAGQHQFTTAVGLSALVPLALTLMVPAFAFHAGGHFHRGLVRLEHRLHIDSFIDHHLHRHA
Ga0079219_103938701	3300006954	Agricultural Soil	MQGRDDAYAIRIGLLAVVAFMSWPVWLAIVSGQREFTAAVGLSALVPLALTLMVPAFAFHAGGHFHRGLVSLEHRLHIDSFIDHHLHRHA*
Ga0075435_1005081863	3300007076	Populus Rhizosphere	IRIGLLAVVAFMSWPVWLAIVAGQHQFTTAVGLSALVPLALTLMVPAFAFHAGGHFHRGLVRLEHRLHIDTFIDHHLHRHA*
Ga0111539_122698001	3300009094	Populus Rhizosphere	MQERDDAFAIRIGLLAVVGFMSWPVWLAIVAGQHQFTTAVGLSALVPLALTLMVPAFAFHAGGHFHRGLVRLEHRLHIDSFI
Ga0105245_112743751	3300009098	Miscanthus Rhizosphere	AFGTAGAAMGTTIAGGLLAVVAFMSWPVWLAIVSGQREFTAAVGLSALVPLALTLMVPAFAFHAGGHFHRGLVSLEHRLHIDSFIDHHLHRHA*
Ga0105243_113913502	3300009148	Miscanthus Rhizosphere	QERVDAFAIRIGLLAVVGFMSWPVWLAIVAGQHPFTTAVGLSALVPLALTLMVPAFAFHAGGHFHRGVVRLEHRLHIDSFIDHHLHRHA*
Ga0111538_140116172	3300009156	Populus Rhizosphere	MQERDDAFAIRIGLLAVVAFMSWPVWLAIVAGQHQFTTAVGLSALVPLALTLMVPAFAFHAGGHFHRGLVRLEHRLHID
Ga0134111_104908122	3300010329	Grasslands Soil	MQERDDGYAIRVGLLAVIAFMSWPVWLAVVSGQHSFSTGVALSALVPLAFTIMLPAVAFHAGRRMHSGLLSLEHRLHIDSFIDHHLHRHA*
Ga0134128_101905174	3300010373	Terrestrial Soil	MQERDDAFAIRIGLLAVVAFMSWPVWLAIVAGQHQFTTAVGLSALVPLALTLMVPAFAFHAGGHFHRGLVKLEHRLHIDTFIDHHLHRHA*
Ga0137369_111520281	3300012355	Vadose Zone Soil	MQQRDDGYAIRVGLLAVVAFMSWPVWLAVVSGQRSFTTTVALSALAPLTLTLMVPAVAFHGGERLHRGLRSIEHRLHIDSFIDHHLHPHA*
Ga0157342_10470661	3300012507	Arabidopsis Rhizosphere	MQERDDAFAIRIGLLGVVAFMSWPVWLAIVAGQHQFTTAVGLSALVPLALTLMVPAFAFHAGGHFHRGLVRLEHRLHIDSFIDHHLHRHA*
Ga0164300_102969531	3300012951	Soil	MQERDDGYAIRVGLLAVVAFMSWPVWLAIVSGQRSFTTGVALSALVPLALTLMLPVVAFHGGRWFHDRLVSLEHRLHIDSFIDHHLHRHA*
Ga0164299_112319351	3300012958	Soil	MQERDDGYAIRVGLLAVVAFMSRKIWLAIVSGPRSFTTGVALSALVPLALTLMLPVVAFHGGRWFHDRLVSLEPRLHIDSFIDHHLHRHA*
Ga0164301_100369813	3300012960	Soil	MQERDDGYAIRVGLLAVIAFMSWPVWLAIVSGQRSFTTGVALSALVPLALTIMLPLVAFHAGARLHRRLVSLEHRLHIDGFIDRHLHPHG*
Ga0164302_100970913	3300012961	Soil	MQERDDGYAIRVGLLAVIAFMSWPVWLAIVSGQRSFTTGVALSALVPLGLTIMLPLVAFHAGARLHRRVVSLEHRLHIDGCIDRHLHPHG*
Ga0164309_105005652	3300012984	Soil	MQERDDGYAIRVGLLAVIAFMSWPVWLAIVSGQRSFTTGVALSALVPLALTIMLPLVAFHAGARFHRRLVSLEHRLHIDGFIDRHLHPHG*
Ga0164304_112461761	3300012986	Soil	KPLTRKERAMQERDDGYAIRVGLLAVVAFMSWTVWLAIVSGQRSFTTGVALSALVPLALTLMLPVVAFHGGRWFHDRLVSLEHRLHIDSFIDHHLHRHA*
Ga0164306_118544062	3300012988	Soil	MQQQHDDPGFAIRVGLLSVVAFMSWPVWLAIVAGQHTFTTAVALSALVPLALTLMVPAFAFHAGGHLHRGVARLEHRLHIDSFIDHHLH
Ga0163162_104929773	3300013306	Switchgrass Rhizosphere	MQERDDAFAIRIGLLAVVGFMSWPVWLAIVAGQHQFTTAVGLSALVPLALTLMVPAFAFHAGGHFHRGLVRLEHRLHIDSFIDHHLHRH
Ga0157372_132936592	3300013307	Corn Rhizosphere	MQGRDDAYAIRIGLLAVVAFMSWPVWLAIVSGQREFTAAVGLSALVPLALTLMVPAFAFHAGGHFHRGLVSLEHRLHIDSFIDH
Ga0182008_109673472	3300014497	Rhizosphere	MEGRDDAYAIRIGLLAVVAFMSWPVWLAIVAGQRTFTTAVALSALVPLALTLMVPAFAFHAGGHLHRGLARLEHRLHIDSFIDH
Ga0157376_102903903	3300014969	Miscanthus Rhizosphere	MQERDDGYAIRVGLLAVIAFMSWPVWLAIVSGQRSFTMGVALSALVPLALTIMLPLVAFHAGARLHRRVVSLEHRLHIDGFIDRHLHPHG*
Ga0132258_126133693	3300015371	Arabidopsis Rhizosphere	MQERDDGYAIRVGLLAVIAFMSWPVWLAIVSGQHSFTTDVALSALVPLGLTLMLPVVAFHGGRWFHERLVSVEHRLHIDSFI
Ga0132258_132394002	3300015371	Arabidopsis Rhizosphere	MQERDDGYAIRVGLLAVIAFMSWPVWLAIVSGQRSFTTGVALSALVPLALTIMLPLVAFHAGARVHRRLVSLEHRLHIDGFIDRHLHPHG*
Ga0132256_1000787083	3300015372	Arabidopsis Rhizosphere	MQERDDAFAIRIGLLGVVAFMSWPVWLAIVAGQHQFTTAVGLSALVPLALTLMVPAFAFHAGGHFHRGVVRLEHRLHIDSFIDHHLHRHA*
Ga0132256_1008139382	3300015372	Arabidopsis Rhizosphere	MQERDDGYAIRVGLLAVIAFMSWPVWLAIVSGQHSFTTDVALSALVPLGLTLMLPVVAFHGGRWFHDRLVSLEHRLHIDSFIDHHLHRHA*
Ga0184644_13568332	3300019269	Groundwater Sediment	MQERDDGYAIRVGLLAVIAFMSWPVWLAIVSGQHSFTMGVALSALVPLALTIMLPAVAFHAGRRMHNGLLSLEHRLHIDSFIDHHLHRHA
Ga0197907_106702882	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	MQERDDAFAIRIGLLAVVAFMSWPVWLAIVAGQHQFTTAVGLSALVPLALTLMVPAFAFHAGGHFHRGLVRLEHRLHIDSFIDH
Ga0197907_113985122	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	MQGRDDAYAIRIGLLAVVAFMSWPVWLAIVSGQREFTAAVGLSALVPLALTLMVPAFAFHAGGHFHRGLVSLEHRLHIDSFIDHHLHRHA
Ga0206356_100507042	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MQERDDAFAIRIGLLAVVAFMSWPVWLAIVAGQHQFTTAVGLSALVPLALTLMVPAFAFHAGGHFHRGVVRLEHRLHIDSFIDHHLHRHA
Ga0206350_106814422	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	MQERDDAFAIRIGLLAVVGFMSWPVWLAIVAGQHQFTTAVGLSALVPLALTLMVPAFAFHAGGHFHRGLVRLEHRLHIDSFIDHHLHRHA
Ga0210381_102388141	3300021078	Groundwater Sediment	MQERDDGYAIRVGLLAVIAFMSWPVWLAIVSGQHSFTMGVALSALVPLALTIMLPAVAFHAGRRMHNGLLSLEHRL
Ga0222624_11343911	3300021951	Groundwater Sediment	MQERDDGYAIRVGLLAVIAFMSWPVWLAVVSGERSFTTTVALSALVPLALTIMLPAVAFHAGARLHRRLVSLEHRLHIDTFIDHHLHPHP
Ga0224712_103105752	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	MQERDDAFAIRIGLLAVVAFMSWPVWLAIVAGQHQFTTAVGLSALVPLALTLMVPAFAFHAGGHFHRGLVRLEHRLHIDTFIDHHLHRHA
Ga0207656_103041052	3300025321	Corn Rhizosphere	MQERDDAFAIRIGLLAVVAFMSWPVWLAIVAGQHQFTTAVGLSALVPLALTLMVPAFAFHAGGHFHRGLVRLEHRLHIDSFIDHHLHRHA
Ga0210142_11244711	3300025552	Natural And Restored Wetlands	MQGRDDAYAIRIGLLAVVAFMSWPVWLAIVSGQRTFTTAVGLSALVPLALTLMVPAFAFHAGGHMHRALARLEHRLHIDSFIDHHLHRHA
Ga0207642_104783431	3300025899	Miscanthus Rhizosphere	VVAFMSWPVWLAIVAGQHQFTTAVGLSALVPLALTLMVPAFAFHAGGHFHRGVVRLEHRLHIDSFIDHHLHRHA
Ga0207642_111350532	3300025899	Miscanthus Rhizosphere	MQERDDGYAIRVGLLAVIAFMSWPVWLAIVSGQRSFTTGVALSALVPLGLTIMLPLVAFHAGARLHRRVVSLEHRLHIDGFIDRHLHPHG
Ga0207680_108063182	3300025903	Switchgrass Rhizosphere	MQERDDAFAIRIGLLAVVGFMSWPVWLAIVAGQHQFTTAVGLSALVPLALTLMVPAFAFHAGGHFHRGLVRLEHRLHIDTFID
Ga0207654_106793552	3300025911	Corn Rhizosphere	MQERDDAFAIRIGLLAVVAFMSWPVWLAIVAGQHQFTTAVGLSALVPLALTLMVPAFAFHAGGHFHRGLVRLEHRLHIDSFIDHHLHRRRPSKAHLRSG
Ga0207706_103807641	3300025933	Corn Rhizosphere	MQERDDAFAIRIGLLAVVAFMSWPVWLAIVAGQHQFTMAVGLSALVPLALTLMVPAFAFHAGGHFHRGVVRLEHRLHIDSFIDHHLHRHA
Ga0207686_100541572	3300025934	Miscanthus Rhizosphere	MQERDDAFAIRIGLLAVVGFMSWPVWLAIVAGQHQFTTAVGLSALVPLALTLMVPAFAFHAGGHFHRGVVRLEHRLHIDSFIDHHLHRHA
Ga0207686_115830051	3300025934	Miscanthus Rhizosphere	MQERDDGYAIRVGLLAVIAFMSWPVWLAIVSGQRSFTTGVALSALVPLGLTIMLPLVAFHAGARLHRRLVSLEHRLHIDGFIDRHLHPHG
Ga0207665_109066721	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MQERDDAFAIRIGLLAVVAFMSWPVWLAIVAGQHQFTTAVGLSALVPLALTLMVPAFAFHAGGHFHRGVVRLEHRL
Ga0208530_10096641	3300026009	Rice Paddy Soil	MQGRDDAYAIRIGLLAVVAFMSWPVWLAIVSGQHTFTTAVGLSALVPLALTLMVPAFAFHAGGHMHRALARLEHRLHIDSFIDHHLHRH
Ga0209382_108128832	3300027909	Populus Rhizosphere	MQERDDAFAIRIGLLAVVGFMSWPVWLAIVAGQHQFTTAVGLSALVPLALTLMVPAFAFHAGGHFHRGLVRLEHRLHIDTFIDHHLHRHA
Ga0247822_119388581	3300028592	Soil	MQERDDGYAIRVGLLAVIAFMSWPVWLAIVSGQHSFTTGVALSALVPLALTLMLPVVAFHGGRWFHDRLVSLEHRLHIDSFIDHHLHRHA
Ga0307295_101096232	3300028708	Soil	IRVGLLAVIAFMSWPVWLAIVSGQHSFTMGVALSALVPLALTIMLPAVAFHAGRRMHNGLLSLEHRLHIDSFIDHHLHRHA
Ga0307318_102247282	3300028744	Soil	MQERDDGYAIRVGLLAVIAFMSWPVWLAVVSGERSFTTTVALSALVPLALTIMLPAVAFHAGARLHRRLVSLEHRLHIDTFIDHHLHPHG
Ga0307290_100266901	3300028791	Soil	MQERDDGYAIRVGLLAVIAFMSWPVWLAIVSGQHSFTMGVALSALVPLALTIMLPAVAFHAGRRMHNGLLSLEHRLH
Ga0307503_104226662	3300028802	Soil	MQERDDGYAIRVGLLAVIAFMSWPVWLAIVSGQRSFTTGVALSALVPLVLTIMLPLVAFHAGARFHRRMISLEHRLHIDGFIDRHLHPHG
Ga0307292_100236861	3300028811	Soil	MQERDDGYAIRVGLLAVIAFMSWPVWLAIVSGQHSFTMGVALSALVPLALTIMLPAVAFHAGRRMHNGLLSLEHRLHID
Ga0307296_103387522	3300028819	Soil	MQERDDGYAIRVGLLAVIAFMSWPVWLAIVSGQHSFTMGVALSALVPLALTIMLPAVAFHAGRRMHNGLLSLEHRLHIDSFIDHHLHRH
Ga0307314_102140212	3300028872	Soil	MQERDDGYAIRVGLLAVIAFMSWPVWLAIVSGQHSFTMGVALSALVPLALTIMLPAVAFHAGRRMHNGLLSLEHRLHIDSFIDH
Ga0307289_100053666	3300028875	Soil	MQERDDGYAIRVGLLAVIAFMSWPVWLAIVSGQHSFTLGVALSALVPLALTIMLPAVAFHAGRRMHNGLLSLEHRLHIDSFIDHHLHRHA
Ga0307308_100653941	3300028884	Soil	MQERDDGYAIRVGLLAVVAFMSWPVWLAIVSGQRSFTTGVALSAFVPLALTIMLPAVAFHAGAWLHRHLLSLEHRLHIDSFIDHHLHRHA
Ga0247827_102860153	3300028889	Soil	MQERDDAFAIRIGLLAVVAFMSWPVWLAIVAGQHQFTTAVGLSALVPLALTLMVPAFAFHAGGHFHRGVVRLEHRLHIDSFIDHHLHR
Ga0308203_10344932	3300030829	Soil	MQERDDGYAIRVGLLAVIAFMSWPVWLAIVSGQHSFTMGVALSALVPLALTIMLPAVAFHAGRRMHNGLLSLEHRLHIDSFIDHHLHR
Ga0308185_10274702	3300031081	Soil	MQERDDGYAIRVGLLAVIAFMSWPVWLAIVSGQHSFTMGVALSALVPLALTIMLPAVAFHAGRRMHNGLLSLEH
Ga0308197_103633012	3300031093	Soil	MQGRDDAYAIRIGLLAVVAFMSWPVWLAVVSGQHTFTMTVALSALVPLFLTLMVPAFAFHAGGHFHRGLLSLEHRLHIDSFIDHHLHRHA
Ga0307498_100413791	3300031170	Soil	MQERDDGYAIRVGLLAVIAFMSWPVWLAIVSGQHSFTTGVALSALVPLALTIMLPLVAFHAGSRLHRRLVSLEHRLHIDGFIDRHLHPHG
Ga0307495_101641231	3300031199	Soil	MQERDDGYAIRVGLLAVIAFMSWPVWLAIVSGQRSFTMGVALSALVPLALTIMLPLVAFHAGARLHRRLVSLEHRLHIDGFIDRHLHPHG
Ga0308174_103110443	3300031939	Soil	MQGRDDAYAIRIGLLAVVAFMSWPVWLAIVSGQREFTAAVGLSALVPLALTLMVPAFAFHAGGHFHRGLVSLEHRLHID
Ga0308173_102180274	3300032074	Soil	MQGRDDAYAIRIGLLAVVAFMSWPVWLAIVSGQREFTAAVGLSALVPLALTLMVPAFAFHAGGHFHRGLVSLEHRLHIDSFIDHH
Ga0307470_106896691	3300032174	Hardwood Forest Soil	MQERDDGYAIRVGLLAVIAFMSWPVWLAIVSGQRSFTMGVALSALVPLALTIMLPLVAFHAGARFHRRLVSLEHRLHIDGFIDRHLHPHG
Ga0326726_100241927	3300033433	Peat Soil	MQERDDGYAIRVGLLAVIAFMSWPVWLAIVSGQHSFTTGVALSALVPLALTLMLPVVAFHGGRRFHNRLVSLEHRLHIDSFIDHHLHRHA
Ga0326731_10335743	3300033502	Peat Soil	MQERDDGYAIRVGLLAVIAFMSWPVWLAIVSGQHSFTTGVALSALVPLALTLMLPVVAFHGGRRLHNRLVSLEHRLHIDSFIDHHLHRHA
Ga0314786_194397_182_454	3300034664	Soil	MQERDDGYAIRVGLLAVIAFMSWPVWLAIVSGQRSFTTGVALSALVPLALTIMLPLVAFHAGARVHRRLVSLEHRLHIDGFIDRHLHPHG
Ga0314793_135244_3_251	3300034668	Soil	MQERDDGYAIRVGLLAVIAFMSWPVWLAIVSGQRSFTTGVALSALVPLALTIMLPLVAFHAGARFHRRLVSLEHRLHIDGFID

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F101118

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences