Metagenome / Metatranscriptome Family F101112

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F101112
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	96 residues
Representative Sequence	SVKLKTRDGELRVRALTPTAPLGAFSLPDARSSIRAALMRIAQDEVFDNWLMRRENSALQWTTCRRDWLPAVGPLELSSSLPFLALAS
Number of Associated Samples	96
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	7.84 %
% of genes near scaffold ends (potentially truncated)	93.14 %
% of genes from short scaffolds (< 2000 bps)	95.10 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.26

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.020 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (27.451 % of family members)
Environment Ontology (ENVO)	Unclassified (35.294 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 29.31% β-sheet: 12.07% Coil/Unstructured: 58.62%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.26
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.26
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF03459	TOBE	50.98
PF13489	Methyltransf_23	7.84
PF01925	TauE	4.90
PF08241	Methyltransf_11	1.96
PF00072	Response_reg	0.98
PF13565	HTH_32	0.98
PF13090	PP_kinase_C	0.98
PF00005	ABC_tran	0.98
PF00528	BPD_transp_1	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	4.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.02 %
Unclassified	root	N/A	0.98 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.02 %
Unclassified	root	N/A	0.98 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.02 %
Unclassified	root	N/A	0.98 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	89.22 %
Unclassified	root	N/A	0.98 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	89.22 %
Unclassified	root	N/A	0.98 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	82.35 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	4.90 %
Unclassified	root	N/A	0.98 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	80.39 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4.90 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.98 %
Unclassified	root	N/A	0.98 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	80.39 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4.90 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.98 %
Unclassified	root	N/A	0.98 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	80.39 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4.90 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.98 %
Unclassified	root	N/A	0.98 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	80.39 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4.90 %
Mycobacterium tuberculosis complex	species group	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex	0.98 %
Unclassified	root	N/A	0.98 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	80.39 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4.90 %
Mycobacterium tuberculosis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	0.98 %
Unclassified	root	N/A	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig56551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	640	Open in IMG/M
3300000550\|F24TB_11276356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	576	Open in IMG/M
3300000891\|JGI10214J12806_13018126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	614	Open in IMG/M
3300000956\|JGI10216J12902_113195885	All Organisms → cellular organisms → Bacteria	1324	Open in IMG/M
3300004114\|Ga0062593_101467188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	733	Open in IMG/M
3300004156\|Ga0062589_101609642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	644	Open in IMG/M
3300004157\|Ga0062590_101699302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	643	Open in IMG/M
3300004479\|Ga0062595_101450604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	629	Open in IMG/M
3300005168\|Ga0066809_10096676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	718	Open in IMG/M
3300005177\|Ga0066690_11064332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	504	Open in IMG/M
3300005329\|Ga0070683_100688908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	979	Open in IMG/M
3300005334\|Ga0068869_101009560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	725	Open in IMG/M
3300005347\|Ga0070668_101388390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	640	Open in IMG/M
3300005440\|Ga0070705_100909411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	708	Open in IMG/M
3300005459\|Ga0068867_100504438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1040	Open in IMG/M
3300005526\|Ga0073909_10510098	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300005549\|Ga0070704_101931999	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	547	Open in IMG/M
3300005578\|Ga0068854_101042849	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	726	Open in IMG/M
3300005718\|Ga0068866_10548001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	773	Open in IMG/M
3300006575\|Ga0074053_11899426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	822	Open in IMG/M
3300006844\|Ga0075428_101649389	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	670	Open in IMG/M
3300006854\|Ga0075425_101709343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	708	Open in IMG/M
3300006880\|Ga0075429_101200679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	662	Open in IMG/M
3300006881\|Ga0068865_100127672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1901	Open in IMG/M
3300006894\|Ga0079215_11385593	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300006903\|Ga0075426_11458310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	520	Open in IMG/M
3300006969\|Ga0075419_10460886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	878	Open in IMG/M
3300009137\|Ga0066709_104013152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	535	Open in IMG/M
3300009162\|Ga0075423_12623774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	551	Open in IMG/M
3300009162\|Ga0075423_12880003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	527	Open in IMG/M
3300009174\|Ga0105241_11837105	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	592	Open in IMG/M
3300010037\|Ga0126304_10342819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	993	Open in IMG/M
3300010047\|Ga0126382_10606535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	902	Open in IMG/M
3300010323\|Ga0134086_10113408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	966	Open in IMG/M
3300010333\|Ga0134080_10488270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	583	Open in IMG/M
3300010371\|Ga0134125_13041742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	508	Open in IMG/M
3300010371\|Ga0134125_13105959	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M
3300010373\|Ga0134128_11070057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	891	Open in IMG/M
3300010400\|Ga0134122_12484791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	567	Open in IMG/M
3300011106\|Ga0151489_1371647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	577	Open in IMG/M
3300012204\|Ga0137374_10968545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	618	Open in IMG/M
3300012355\|Ga0137369_11109476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	516	Open in IMG/M
3300012360\|Ga0137375_11259354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	561	Open in IMG/M
3300012901\|Ga0157288_10234604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	606	Open in IMG/M
3300012904\|Ga0157282_10235617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	611	Open in IMG/M
3300012910\|Ga0157308_10000815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	5611	Open in IMG/M
3300012911\|Ga0157301_10462308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	506	Open in IMG/M
3300012951\|Ga0164300_10863753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	568	Open in IMG/M
3300012972\|Ga0134077_10257993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	723	Open in IMG/M
3300012988\|Ga0164306_11905885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	517	Open in IMG/M
3300012989\|Ga0164305_11795854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	553	Open in IMG/M
3300014325\|Ga0163163_12857753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	539	Open in IMG/M
3300014969\|Ga0157376_12836411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	524	Open in IMG/M
3300014969\|Ga0157376_12981635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	512	Open in IMG/M
3300015372\|Ga0132256_100590946	All Organisms → cellular organisms → Bacteria	1224	Open in IMG/M
3300017659\|Ga0134083_10491190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	548	Open in IMG/M
3300018028\|Ga0184608_10160332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	974	Open in IMG/M
3300018028\|Ga0184608_10176946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	929	Open in IMG/M
3300018061\|Ga0184619_10310365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	722	Open in IMG/M
3300018072\|Ga0184635_10416716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	506	Open in IMG/M
3300018075\|Ga0184632_10457530	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	528	Open in IMG/M
3300018076\|Ga0184609_10075462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1483	Open in IMG/M
3300019255\|Ga0184643_1261946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	576	Open in IMG/M
3300019362\|Ga0173479_10272392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	756	Open in IMG/M
3300019869\|Ga0193705_1099374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	533	Open in IMG/M
3300020005\|Ga0193697_1096179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	710	Open in IMG/M
3300020018\|Ga0193721_1004233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3740	Open in IMG/M
3300021510\|Ga0222621_1095902	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	629	Open in IMG/M
3300022694\|Ga0222623_10095315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1156	Open in IMG/M
3300023071\|Ga0247752_1044621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	684	Open in IMG/M
3300024055\|Ga0247794_10114381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	815	Open in IMG/M
3300025327\|Ga0209751_11349100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	508	Open in IMG/M
3300025935\|Ga0207709_10134140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1692	Open in IMG/M
3300025937\|Ga0207669_11877831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	512	Open in IMG/M
3300025938\|Ga0207704_10907623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	741	Open in IMG/M
3300025949\|Ga0207667_11920317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	554	Open in IMG/M
3300025981\|Ga0207640_10093589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2088	Open in IMG/M
3300026088\|Ga0207641_12640736	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300026116\|Ga0207674_10009302	All Organisms → cellular organisms → Bacteria	11254	Open in IMG/M
3300026552\|Ga0209577_10529343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	765	Open in IMG/M
3300027880\|Ga0209481_10654262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	545	Open in IMG/M
3300028380\|Ga0268265_10791173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	924	Open in IMG/M
3300028716\|Ga0307311_10209335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	573	Open in IMG/M
3300028717\|Ga0307298_10026172	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1534	Open in IMG/M
3300028718\|Ga0307307_10025774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1649	Open in IMG/M
3300028722\|Ga0307319_10152792	Not Available	749	Open in IMG/M
3300028755\|Ga0307316_10143295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	849	Open in IMG/M
3300028778\|Ga0307288_10422902	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300028791\|Ga0307290_10061483	All Organisms → cellular organisms → Bacteria	1359	Open in IMG/M
3300028796\|Ga0307287_10079063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1232	Open in IMG/M
3300028811\|Ga0307292_10472188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	537	Open in IMG/M
3300028814\|Ga0307302_10140108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1168	Open in IMG/M
3300028819\|Ga0307296_10316057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	852	Open in IMG/M
3300028876\|Ga0307286_10047833	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	1445	Open in IMG/M
3300028878\|Ga0307278_10078315	All Organisms → cellular organisms → Bacteria	1489	Open in IMG/M
3300028878\|Ga0307278_10466534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	552	Open in IMG/M
3300028878\|Ga0307278_10508649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	526	Open in IMG/M
3300031170\|Ga0307498_10032716	All Organisms → cellular organisms → Bacteria	1293	Open in IMG/M
3300031184\|Ga0307499_10167687	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	656	Open in IMG/M
3300031901\|Ga0307406_10066046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2353	Open in IMG/M
3300032126\|Ga0307415_101070707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	753	Open in IMG/M
3300032205\|Ga0307472_100789374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	866	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	71.57%
Host-Associated	Host-Associated	28.43%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	62.75%
Plants	Host-Associated → Plants	28.43%
Aquatic	Environmental → Aquatic	8.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	62.75%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.67%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.78%
Sediment	Environmental → Aquatic → Sediment	7.84%
Freshwater	Environmental → Aquatic → Freshwater	0.98%
Roots	Host-Associated → Plants → Roots	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.73%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.84%
Loam	Environmental → Terrestrial → Soil → Loam	4.90%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.94%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.98%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	44.12%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.84%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.86%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.94%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.98%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.98%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.98%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.98%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	27.45%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.84%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.90%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.94%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.94%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.96%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.98%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.98%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.98%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.98%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.98%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.98%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300019255	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300020005	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300023071	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S019-104C-5	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300025327	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes)	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_08538240	2124908045	Soil	RGVAIEGLAPASVFRIPGHRWMKVKTREGVLRVRALTPTAPLGAFSLGDASASIRTALIRISQDAVFDNWIMRRESSALQWTTCRRDWLPAVGPLELTSSLPFLALAS
F24TB_112763562	3300000550	Soil	APSWLGHRSRGVAIEGLAPAPVFRISGRGWVKVKTRDGILRVRTLSPTAPLGAFSLRDAWSSIRAALVQHAQDAVFDNWLMRRESAALQWTTCRRDWLPAVGPLELTTELPFLALAS*
JGI10214J12806_130181261	3300000891	Soil	PVFRISGHGWARVKTRDGIIHVRALTPTAPLGAFSLGDAWSSIRAALVRDAQGSVFDNWLMRRESAALQWTTCRKDWLPAVGPLELTTELPFLALAS*
JGI10216J12902_1131958851	3300000956	Soil	ATPAASWLGHRRRGVAIEGLAPGSVFRLPGHRWVKLKTREGELKVRALTPTAPLGAFSLGDASASIRTALIRISQDAVFDNWLMRRESSALQWTTCRRDWLPAVGPLELTSSLPFLALAS
Ga0062593_1014671881	3300004114	Soil	WARVKTRDGIIHVRALTPTAPLGAFSLGDAWSSIRAALVRDAQGSVFDNWLMRRESAALQWTTCRKDWLPAVGPLELTTELPFLALAS*
Ga0062589_1016096422	3300004156	Soil	IEGMAPASVFQIPGHRWVKLKTREGEFRVRAVTATAPLGAFSISDARSSIRAALMHISQDEVFDNWLMSRENSALQWSTCRRDWLPAVGPLELSSSLPFLALAS*
Ga0062590_1016993022	3300004157	Soil	IEGMAPASVFQIPGHRWVKLKTREGEFRVRAVTATAPLGAFSISDARSSIRAALMHIAQDEVFDNWLMSRENSALQWSTCRRDWLPAVGPLELSSSLPFLALAS*
Ga0062595_1014506042	3300004479	Soil	APGSVFRIPGRRWVKLKTRDGELRVRALTPTAPLGAFSISDAASSIRAALMRIAQDEVFDNWLTSRESSAVQWTTCRRDWLPAIGPNELSSSLPFLALAS*
Ga0066809_100966762	3300005168	Soil	KVKTREGELRVRALTPTAPLGAFSLADAGSSIRAALMRIAQDEVFDNWLMSRENSALQWTTCRRDWLPAVGPLELSSSLPFLALAS*
Ga0066690_110643321	3300005177	Soil	RGVAIEGMAPEAVFGIPTGRRVTLHTREGVLHVRAVGPTAPLGAFTIDAARSSIRAALVHLAKDQAFDNWLVQQESSALAWTTCRRDWLPAVGPLELTTELPFLELAL*
Ga0070683_1006889081	3300005329	Corn Rhizosphere	EGEFRVRAVTATAPLGAFSISDARSSIRAALMRISQDEVFDNWLMSRENSALQWSTCRRDWLPAVGPLELSSSLPFLALAS*
Ga0068869_1010095601	3300005334	Miscanthus Rhizosphere	SVFQIPGHRWVKLKTREGEFRVRAVTATAPLGAFSISDARSSIRAALMRISQDEVFDNWLMSRENSALQWSTCRRDWLPAVGPLELSSSLPFLALAS*
Ga0070668_1013883902	3300005347	Switchgrass Rhizosphere	ASWLGHRKRGVAIEGMAPASVFQIPGHRWVKLNTREGEFRVRAVTATAPLGAFSISDARSSIRAALMRISQDEVFDNWLMSRENSALQWSTCRRDWLPAVGPLELSSSLPFLALAS*
Ga0070705_1009094111	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	GMAPAPVFRIRGHHWVKLETREGELRVRALTAAAPLGAFSISDARSSIRAALMRISQDEVFDNWLMRRENSALQWSTCRRDWLPAVGPLELTSSLPFLALAS*
Ga0068867_1005044382	3300005459	Miscanthus Rhizosphere	ATVKTRDGIIHVRALTSTAPLGAFSLGDAWSSIRAALVRDAQGSVFDNWLMRRESAALQWTTCRKDWLPAVGPLELTTELPFLALAS*
Ga0073909_105100981	3300005526	Surface Soil	LTPTAPLGAFSLGDAWSSIRAALVQDAQDSVFDNWLMRRESAALQWTTCRKDWLPAVGPLELTTELPFLALAS*
Ga0070704_1019319991	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	KTHEGVFHVRALSPTSPLGAFSLASARASIRAALARIAQDQSFDNWLMHKEQGALSRTTCRRDWLPSIGTLELTSELPFLALAS*
Ga0068854_1010428492	3300005578	Corn Rhizosphere	GVAIEGLAPASVFRISPGRTVTLKTHEGVFHVRAKGPTAPLGAFALSAARASIRAALVRIAQDQSFDNWLMHREQGALSRATCRRDWLPSVGTLELTSELPFLALAS*
Ga0068866_105480011	3300005718	Miscanthus Rhizosphere	SVKLKTRDGELRVRALTPTAPLGAFSLPDARSSIRAALMRIAQDEVFDNWLMRRENSALQWTTCRRDWLPAVGPLELSSSLPFLALAS*
Ga0074053_118994261	3300006575	Soil	GWSRVKTRDGILRVRALSPTAPLGAFSLADSWSSIRAALVQDAQDSVFDNWLMRRESAALQWTTCRKDWLPAVGPLELTTELPFLALAS*
Ga0075428_1016493891	3300006844	Populus Rhizosphere	ALGPTAPLGAFSIQAAASSIRAALVRIAQDGVFDNWLMRRESSALAATTCRRDWLPAVGPMELPSELPFLALAS*
Ga0075425_1017093432	3300006854	Populus Rhizosphere	WATVKTRDGAIRVRALTPTAPLGAFSLGDAWSSIRAALMRDAQGSVFDNWLMRRESAALQWTTCRKDWLPAVGPLELTTELPFLALAS*
Ga0075429_1012006791	3300006880	Populus Rhizosphere	RLVEATPRQWWLGQRKRGLAIQGLAPAAVFGIPAHKLVTLKTQDGSMKVRALAPIAPLGAFSIQAASASIRAALVRIAQDGVFDNWLMRRESSALAGTTCRRDWLPAIGPMELANELPFLALAN*
Ga0068865_1001276721	3300006881	Miscanthus Rhizosphere	RWVTLKTRDGELRVRALTPTAPLGAFSISDAASSIRAALMRIAQDEVFDNWLMRRENSALQWTTCRRDWLPAVGPLELSSSLPFLALAS*
Ga0079215_113855932	3300006894	Agricultural Soil	LSPTAPLGAFTLPEAGASIRAALVQIAQDQVFDNWLMRREQSALAWTTCRRDWLPSLGTLELTSELPFLKLVN*
Ga0075426_114583102	3300006903	Populus Rhizosphere	ISGLAPAPVFQISGHGWTSVKTRDGVVKVRALSPTAPLGAFSLGDAWSSIRAALVQDAQDSVFDNWLMRRESAALQWTTCRKDWLPQVGPLEITTELPFLALAS*
Ga0075419_104608862	3300006969	Populus Rhizosphere	FGIPAHKLVTLKTQDGSMKVRALGPIAPLGAFSIQAASASIRAALVRIAQDGVFDNWLMRRESSALAGTTCRRDWLPAIGPMELANELPFLALAN*
Ga0066709_1040131522	3300009137	Grasslands Soil	VFGIPLHRWVTLQTREGTIHVRALGPTAPLGTFSIDQATSSIRAALVRIAQDAVFDNWLMRRESAALQWTTCRRDWLPAVGPLELTTELPFLALAS*
Ga0075423_126237742	3300009162	Populus Rhizosphere	VAIEGLAPSSVFRIPRGHWVKLKTREGEVRVRALTPTAPLGAFSLADAGSSIRAALMRIAQDEVFDNWLMSRENSALQWTTCRRDWLPAVGPLELSSSLPFLALAS*
Ga0075423_128800032	3300009162	Populus Rhizosphere	RGVAIEGMAPASVFQIPGHRWVKLKTREGEFRVRAVTATAPLGAFSISDARSSIRAALMHISQDEVFDNWLMSRENSALQWSTCRRDWLPAVGPLELSSSLPFLALAS*
Ga0105241_118371051	3300009174	Corn Rhizosphere	VAIEGLAPSSVLRIPGGRSVKLKTRDGELRVRALTPTAPLGAFSLPDARSSIRAALMRIAQDEVFDNWLMRRENSALQWTTCRRDWLPAVGPLELSSSLPFLALAS*
Ga0126304_103428191	3300010037	Serpentine Soil	LAPAGVFGIPAHKVVTLKAQDGAVKVRALGPTAPLGAFSIQAAASSIRAALVRIAQDGVFDNWLMRRESSALAATTCRRDWLPAVGPMELTSELPFLALAS*
Ga0126382_106065351	3300010047	Tropical Forest Soil	RISGHGWVKVKTRDGVIRVRARTPTAPLGAFSLSDAWSSIRAALVQDAQDSVFDNWLMRRESAALQWTTCRKDWLPQVGPLEITTELPFLALAS*
Ga0134086_101134081	3300010323	Grasslands Soil	LAPAPVFRVSGHGWVKVKTRDGVLRVRALTPTAPLGAFSLSDAWSSIRAALVEHAQDAVFDNWVMRRESAALQWTTCRKDWLPAVGPLELTTELPFLALAS*
Ga0134080_104882701	3300010333	Grasslands Soil	DGVLRVRALSPTAPLGAFSLSDAWSSIRAALVEHAQDAVFDNWVMRRESAALQWTTCRKDWLPAVGPLELTTELPFLALAS*
Ga0134125_130417421	3300010371	Terrestrial Soil	IEGMAPGSVFRIPGRRWVTLKTRDGELRVRALTPTAPLGAFSISDAASSIRAALMRIAQDEVFDNWLTSRESSAVQWTTCRRDWLPAVGPNELSSSLPFLALAS*
Ga0134125_131059591	3300010371	Terrestrial Soil	TRDGELRVRALTPTAPLGAFSIADAASSIRVALMRIAQDEVFDNWLTSRESSAVQWTTCRRDWLPAVGPNELSSSLPFLALAS*
Ga0134128_110700571	3300010373	Terrestrial Soil	REGELRVRALTAAAPLGAFSISDARSSIRAALMRISQDEVFDNWLMRRENSALQWSTCRRDWLPAVGPLELTSSLPFLALAS*
Ga0134122_124847911	3300010400	Terrestrial Soil	GVAIDGLAPASIFRISGGRAVTLKTHEGVFHVRALSPTSPLGAFSLASARASIHAALARIAQDQSFDNWLMHKEQGALSRTTCRRDWLPSIGTLELSSELPFLALAS*
Ga0151489_13716472	3300011106	Soil	WLGHRSRGVAIDGLAPAPVFRISGHGWSRVKTRDGILHVRPLSPTAPLGAFSLADSWSSIRAALVQDAQDSVFDNWLMRRESAALQWTTCRKDWLPAVGPLELTTELPFLALAS*
Ga0137374_109685451	3300012204	Vadose Zone Soil	MVHVRALSPTAPLGAFSVSAASASIRAALIRIAQDQVFDNWLMRRESSALAATTCRRDWLPAVGTLELSSALPFLELAN*
Ga0137369_111094762	3300012355	Vadose Zone Soil	FRISGRGWAKVKTRDGVLRVRALSPPAPLGAFSLSDAWPSIRAALVQHAQDAVFDNWLMRRESAALQWTTCRKDWLPAVGPLELTTELPFLALVS*
Ga0137375_112593541	3300012360	Vadose Zone Soil	MAPAAVFRIGRGPFVSLKTREGTLRVRALSPAAPLGAFSLSAASASIRAALVRNAQDEVFDNWLMRRETSALAFTTCRRDWLPAVGTLELTSQLPFLALAS*
Ga0157288_102346041	3300012901	Soil	TREGELRVRALTAAAPLGAFSISDARSSIRAALMRISQDEVFDNWLMRRENSALQWSTCRRDWLPAVGPLELTSSLPFLALAS*
Ga0157282_102356171	3300012904	Soil	MTDGLAPAPVFRISGHGWARVKTRDGIIHVRALTPTAPLGAFSLGDAWSSIRAALVRDTQGSVFDNWLMRRESAALQWTTCRKDWLPA
Ga0157308_100008158	3300012910	Soil	APAPVFRIRAHHWVKLETREGVLRVRALTAAAPLGAFSISDARSSIRAALMRISQDEVFDNWLMRRENSALQWSTCRRDWLPAVGPLELTSSLPFLALAS*
Ga0157301_104623082	3300012911	Soil	GVAIEGMAPASVFQIPGHRWVKLKTREGEFRVRAVTATAPLGAFSISDARSSIRAALMHISQDEVFDNWLMSRENSALQWSTCRRDWLPAVGPLELSSSLPFLALAS*
Ga0164300_108637531	3300012951	Soil	PAPVFRISGHGWARVKTRDGVIRVRALTPTAPLGAFSLGDAWSSIRAALIQDAQGSVFDNWLMRRESAALQWTTCRKDWLPAVGPLELTTELPFLALAS*
Ga0134077_102579931	3300012972	Grasslands Soil	MAPAAVFRISGRRAVTLHTHEGIIRVRALSPTAPLGAFSLSSASASIRAALGRIAQDQAFDNWLMHRESSALSSTTCRRDWLPSVGTLELTSELPFLALAN*
Ga0164306_119058851	3300012988	Soil	ISGHGWSRVKTRDGILRVRALSPTAPLGAFSLADSWSSIRAALVQDAQDSVFDNWLMRRESAALQWTTCRKDWLPAVGPLELTTELPFLALAS*
Ga0164305_117958542	3300012989	Soil	PLTPTAPLGAFSLADAPPSIRAALMRIAQDEVFDNWLMRRENSALQWTTCRRDWLPAVGPLELSSSLPFLALAS*
Ga0163163_128577531	3300014325	Switchgrass Rhizosphere	PIFRISGHGWVRVKTRDGVIRVRALTPTAPLGAFSLNDAWSSIRAALIEDAQGSVFDNWLMRHESAALQWTTCRKDWLPAVGPLELTTELPFLALAS*
Ga0157376_128364111	3300014969	Miscanthus Rhizosphere	GWVRVKTRDGVIRVRALTPTAPLGAFSLNDAWSSIRAALIEDAQGSVFDNWLMRHESAALQWTTCRKDWLPAVGPLELTTELPFLALAS*
Ga0157376_129816351	3300014969	Miscanthus Rhizosphere	VKTRDGMIRVRALTPTAPLGAFSLNDAWSSIRAALIQDAQGSVFDNWLMRRESAALQWTTCRKDWLPAVGPLELATELPFLALAS*
Ga0132256_1005909461	3300015372	Arabidopsis Rhizosphere	HGWVRVKTRDGMIRVRALTPTAPLGAFSLNDAWSSIRAALVQDAQESVFDNWLMRRESAALQWTTCRKDWLPAVGPLELTTELPFLALAS*
Ga0134083_104911902	3300017659	Grasslands Soil	LRVRVLSPTAPLGAFSLSDAWSSIRAALVQHAQDAVFDNWLMRRESAALQWTTCRRDWLPAVGPLELTTELPFLALAS
Ga0184608_101603322	3300018028	Groundwater Sediment	GVLHVRAVGPTAPLGAFALGRARSSIRAALVRASQDQVFDNWLMQREASALQMTTCRRDWLPAVGPLELGNELPFLELAL
Ga0184608_101769461	3300018028	Groundwater Sediment	IDGLAPAPVFRIPGHGWTRVKTRDGVIRVRALTPTAPLGAFSLGDAWSSIRAALVQDAQGSVFDNWLMRRESAALQWTTCRKDWLPAVGPLELTTELPFLALAS
Ga0184619_103103651	3300018061	Groundwater Sediment	MAPAAVFRIARGPFVNLKTREGTLRVRALSPAAPLGAFSLSAASASIRAALVRNAQDDVFDTWLMRRETSELGATTCRRDWLPAVGTLELTSQLPFLDLAS
Ga0184635_104167162	3300018072	Groundwater Sediment	WLGHRSRGVAIDGLAPAPVFRISGHGWTRVKTRDGVIRVRALTPTAPLGAFSLGDAWSSIRAALVQDAQGSVFDNWLMHRESAALQWTTCRKDWLPAVGPLELTTELPFLALAS
Ga0184632_104575301	3300018075	Groundwater Sediment	SRGVAIDGLAPAPVFRISGHGWTRVKTRDGVIRVRALTPTALLGAFSLGDAWSSIRAALVRDAQGSVFDNWLMRRESAALQWTTCRRDWLPAVGPLELTTELPFLALAS
Ga0184609_100754621	3300018076	Groundwater Sediment	VAIQGMAPAAVFRIARGPFVNLKTREGTLRVRALSPAAPLGAFSLSAASASIRAALVRNAQDAVFDNWLMRRETSALAFTTCRRDWLPAVGTLELMSQLPFLALAS
Ga0184643_12619461	3300019255	Groundwater Sediment	TATLNTREGVLHVRAAGPTAPLGAFAFGKARSSIRAALVRASQDQVFDNWLMQREASALQMTTCRRDWLPAVGPLELGNELPFLGLAL
Ga0173479_102723921	3300019362	Soil	SWLGHRKRGVAIEGMAPAPVFRIRGHHWVKLETREGELRVRALTAAAPLGAFSISDARSSIRAALMRISQDEVFDNWLMRRENSALQWSTCRRDWLPAVGPLELTSSLPFLALAS
Ga0193705_10993742	3300019869	Soil	GAKLQTREGPLHVRALSPTAPLGAFSLSAASASIRAALARNARDGVFDNWLMQRESSALAFTTCRRDWLPAVGTLELTSQLPFLELAN
Ga0193697_10961791	3300020005	Soil	GHRIRGVAIDGLAPAPVFRISGHGWTRVKTRDGVIRVRALTPTAPLGAFSLGDAWSSIRAALVQDAQGSVFDNWLMRRESAALQWTTCRKDWLPAVGPLELTTELPFLALAS
Ga0193721_10042335	3300020018	Soil	GVAIEGMAPAAVFRIPTGKTATVNTREGVLHVRAAGPTAPLGAFALGRARSSIRAALVRASQDQVFDNWLMQREASALQMTTCRRDWLPAVGPLELGNELPFLGLAL
Ga0222621_10959022	3300021510	Groundwater Sediment	PVFRISGHGWTRVKTRDGVIRVRALTPTAPLGAFSLGDAWSSIRAALVQDAQGSVFDNWLMRRESAALQWTTCRKDWLPAVGPLELTTELPFLALAS
Ga0222623_100953151	3300022694	Groundwater Sediment	WLGHRTRGVAIQGMAPAAVFRIARGPFVKLKTREGTLRVRALSPAAPLGAFSLSRASASIRAALVRHAQDEVFDNWLMRRETSALGFTTCRRDWLPAVGTLELTSQLPFLELAS
Ga0247752_10446212	3300023071	Soil	SGGRAVTLKTHEGVFHVRALSPTSPLGAFSLASARASIRAALARIAQDQSFDNWLMHKEQGALSRTTCRRDWLPSIGTLELTSELPFLALAS
Ga0247794_101143811	3300024055	Soil	VPAPSWLGHRKRGVAIEGMAPAPVFRIRGHHWVKLETREGELRVRALTAAAPLGAFSISDARSSIRAALMRISQDEVFDNWLMSRENSALQWSTCRRDWLPAVGPLELSSSLPFLALAS
Ga0209751_113491001	3300025327	Soil	HRGVAIEGLAPASVFRIPVNRFSALRTLEGAMRVRALGPTAPLGAFSLATATASIRAALVRIAQEQAFDNWLMRRESSALSVTTCRRDWLPSPGTLELTSELPFLQLAN
Ga0207709_101341403	3300025935	Miscanthus Rhizosphere	VAIEGLAPSSVLRIPGGRSVKLKTRDGELSVRALTPTAPLGAFSLADARSSIRAALMRIAQDEVFDNWLMRRENSALQWTTCRRDWLPAVGPLELSSSLPFLALAS
Ga0207669_118778312	3300025937	Miscanthus Rhizosphere	TVKTRDGVIHVRALTPTAPLGAFSLGDAWSSIRAALVRDAQGSVFDNWLMRRESAALQWTTCRKDWLPAVGPLELTTELPFLALAS
Ga0207704_109076232	3300025938	Miscanthus Rhizosphere	GRRGRGVAIEGLAPSSVLRIPGGRSVKLKTRDGELRVRALTPTAPLGAFSLADARSSIRAALMRIAQDEVFDNWLMRRENSALQWTTCRRDWLPAVGPLELSSSLPFLALAS
Ga0207667_119203171	3300025949	Corn Rhizosphere	RAVTATAPLGAFSISDARSSIRAALMHISQDEVFDNWLMSRENSALQWSTCRRDWLPAVGPLELSSSLPFLALAS
Ga0207640_100935892	3300025981	Corn Rhizosphere	MAPASVFQIPGHRWVKLKTREGEFRVRAVTATAPLGAFSISDARSSIRAALMHISQDEVFDNWPMSRENSALQWSTCRRDWLPAVGPLELSSSLPFLALAS
Ga0207641_126407361	3300026088	Switchgrass Rhizosphere	VRALTPTAPLGAFSLNDAWSSIRAALIEDAQGSVFDNWLMRHESAALQWTTCRKDWLPAVGPLELTTELPFLALAS
Ga0207674_100093021	3300026116	Corn Rhizosphere	GELRVRALTPTAPLGAFSLADAGSSIRAALMRIAQDEVFDNWLMSRENSALQWTTCRRDWLPAVGPLELSSSLPFLALAS
Ga0209577_105293431	3300026552	Soil	GVLHVRAVGPTAPLGAFTIDAARSSIRAALVHLAKDQAFDNWLVQQESSALAWTTCRRDWLPAVGPLELTTELPFLELAL
Ga0209481_106542622	3300027880	Populus Rhizosphere	GIPAHKLVTLKTQDGSMKVRALGPIAPLGAFSIQAASASIRAALVRIAQDGVFDNWLMRRESSALAGTTCRRDWLPAIGPMELANELPFLALAN
Ga0268265_107911732	3300028380	Switchgrass Rhizosphere	VAIEGMAPASVFQIPGHRWVKLKTREGEFRVRAVTATAPLGAFSISDARSSIRAALMHIAQDEVFDNWLMSRENSALQWSTCRRDWLPAVGPLELSSSLPFLALAS
Ga0307311_102093352	3300028716	Soil	RISGHGRTRVKTRDGVIRVRALTPTAPLGAFSLGDAWSSIRAALVQDAQGSVFDNWLMRRESAALQWTTCRKDWLPAVGPLELTTELPFLALAS
Ga0307298_100261723	3300028717	Soil	NTREGVLHVRAVGPTAPLGAFALGRARSSIRAALVRASQDQVFDNWLMQREASALQMTTCRRDWLPAVGPLELGNELPFLELAL
Ga0307307_100257742	3300028718	Soil	VKTRDGVIRVRALTPTAPLGAFSLGDAWSSIRAALVQDAQGSVFDNWLMRRESAALQWTTCRKDWLPAVGPLELTTELPFLALAS
Ga0307319_101527922	3300028722	Soil	PLRVRALSPTAQLGAFSLSAASASIRAALARNARDGVFDNWLMQRESSALAFTTCRRDWLPAVGTLELTSQLPFLELAN
Ga0307316_101432952	3300028755	Soil	FRISGHSWTRVKTRDGIIRVRALTPTAPLGAFSLGDAWSSIRAALVQDAQGSVFDNWLMRRESAALQWTTCRKDWLPAVGPLELTTELPFLALAS
Ga0307288_104229021	3300028778	Soil	RVRALTPTAPLGAFSLGDAWSSIRAALVQDAQGSVFDNWLMRRESAALQWTTCRKDWLPAVGPLELTTELPFLALAS
Ga0307290_100614831	3300028791	Soil	GVAIDGLAPAPVFRISGHGRTRVKTRDGVIRVRALTPTAPLGAFSLGDAWSSIRAALVQDAQGSVFDNWLMRRESAALQWTTCRKDWLPAVGPLELTTELPFLALAS
Ga0307287_100790632	3300028796	Soil	VAIESMAPAAVFRIPTGKTATVNTREGVLHVRAVGPTAPLGAFALGRARSSIRAALVRASQDQVFDNWLMQREASALQMTTCRRDWLPAVGPLELGNELPFLELAL
Ga0307292_104721882	3300028811	Soil	RWVKLKTRDGELHVRALTPTAPLGAFSISDAASSIRAALMRIAQDEVFDNWLTSRESSAVQWTTCRRDWLPAVGPNELSSSLPFLALAS
Ga0307302_101401082	3300028814	Soil	GGRGAKLQTREGPLHVRALSPTAPLGAFSLSAASASIRAALARNARDGVFDNWLMQRESSALAFTTCRRDWLPAVGTLELTSQLPFLELAN
Ga0307296_103160572	3300028819	Soil	WLGHRSRGVAIQGMAPAAVFRIARGPFVNLKTREGTLRVRALSPGAPLGAFSLSAASASIRAALVRNAQDEVFDNWLMRREANALAATTCRRDWLPAVGTLELTSQLPFLALAS
Ga0307286_100478332	3300028876	Soil	APSWLGRRHRGVAIEGMAPASVFRIPGHRWVKLKTREGDLRVRALTPTAPLGAFSLPDASSSIRAALTRIAQDEVFDNWLISRENSALQWTTCRRDWLPAVGPLELTSSLPFLALAS
Ga0307278_100783153	3300028878	Soil	VFRIARGPFVTLKTREGTLRVRALSPAAPLGAFSLSAASASIRAALVRNAQDDVFDNWLMRREASALGATTCRRDWLPAVGTLELTSELPFLELAS
Ga0307278_104665342	3300028878	Soil	NLKTREGTLRVRALSPAAPLGAFSLSAASASIRAALVRNAQDDVFDTWLMRRETSALGATTCRRDWLPAVGTLELTSQLPFLDLAS
Ga0307278_105086492	3300028878	Soil	RNGVLRVRALSPTAPLGAFSLSDAWSSIRAALVQHAQDAVFDNWLMRRESAALQWTTCRKDWLPAVGPLELTTELPFLALAS
Ga0307498_100327161	3300031170	Soil	HGWARVKTRDGVIRVRALTPTAPLGAFSLGDAWSSIRAALVQDAQGSVFDNWLMRRESAALQWTTCRKDWLPAVGPLELTTELPFLALAS
Ga0307499_101676871	3300031184	Soil	TRDGVISVRALTPTAPLGAFSLGDAWSSIRAALVQDAQGSVFDNWLMRRESAALQWTTCRKDWLPAVGPLELTTELPFLALAS
Ga0307406_100660464	3300031901	Rhizosphere	VLKVRALGPTAPLGAFSIQAATASIRAALVRIAQDGVFDNWIMQRESAALAGTTCRRDWLPERGPMELTSELPFLALAN
Ga0307415_1010707072	3300032126	Rhizosphere	DGLAPAAVFRLPARKWVTLTPLDGVLKVRALGPTAPLGAFSIQAATASIRAALVRIAQDGVFDNWIMQRESAALAGTTCRRDWLPERGPMELTSELPFLALAN
Ga0307472_1007893742	3300032205	Hardwood Forest Soil	YYTLNPNTTLFQTSSGDAIDGLAPAPIFRISGHGWVKVKTRDGVVRVRARTPTAPLGAFSLSDAWSSIRAALVQDAQDAVFDNWLMRRESAALQWTTCRKDWLPAVGPLEITTELPFLALAS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F101112

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences