Metagenome / Metatranscriptome Family F101101

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F101101
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	42 residues
Representative Sequence	MFERFTDKARTAVILAKAKAAERGDQIRPVYLLHALASGEG
Number of Associated Samples	93
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	97.06 %
% of genes from short scaffolds (< 2000 bps)	92.16 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (52.941 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (31.372 % of family members)
Environment Ontology (ENVO)	Unclassified (29.412 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (40.196 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.38% β-sheet: 0.00% Coil/Unstructured: 53.62%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF08281	Sigma70_r4_2	36.27
PF08279	HTH_11	26.47
PF13384	HTH_23	17.65
PF08022	FAD_binding_8	5.88
PF01794	Ferric_reduct	2.94
PF02861	Clp_N	0.98
PF04205	FMN_bind	0.98
PF02424	ApbE	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0542	ATP-dependent Clp protease, ATP-binding subunit ClpA	Posttranslational modification, protein turnover, chaperones [O]	0.98
COG1477	FAD:protein FMN transferase ApbE	Posttranslational modification, protein turnover, chaperones [O]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.94 %
Unclassified	root	N/A	47.06 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.94 %
Unclassified	root	N/A	47.06 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.94 %
Unclassified	root	N/A	47.06 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	50.98 %
Unclassified	root	N/A	47.06 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.98 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	50.98 %
Unclassified	root	N/A	47.06 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.06 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	29.41 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.06 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	3.92 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.94 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	1.96 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.98 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.98 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.06 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	3.92 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.94 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.96 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.98 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.98 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.06 %
Rhodococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus	3.92 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.94 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.96 %
Saccharothrix	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharothrix	0.98 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.98 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.06 %
unclassified Rhodococcus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus	3.92 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.94 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.96 %
Saccharothrix espanaensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharothrix → Saccharothrix espanaensis	0.98 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.98 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.06 %
Rhodococcus sp. P27	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus → Rhodococcus sp. P27	3.92 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.94 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.96 %
Saccharothrix espanaensis DSM 44229	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharothrix → Saccharothrix espanaensis → Saccharothrix espanaensis DSM 44229	0.98 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.98 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459024\|GZRSKLJ02JXJDV	Not Available	503	Open in IMG/M
3300001653\|JGI20275J16321_100571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	761	Open in IMG/M
3300001686\|C688J18823_10549252	All Organisms → cellular organisms → Bacteria	739	Open in IMG/M
3300005436\|Ga0070713_100533113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1110	Open in IMG/M
3300005451\|Ga0066681_10181476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1252	Open in IMG/M
3300005455\|Ga0070663_101421566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	615	Open in IMG/M
3300005471\|Ga0070698_101979394	Not Available	536	Open in IMG/M
3300005529\|Ga0070741_11371237	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	589	Open in IMG/M
3300005530\|Ga0070679_100878892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	840	Open in IMG/M
3300005618\|Ga0068864_101755315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	626	Open in IMG/M
3300005834\|Ga0068851_10512541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	721	Open in IMG/M
3300006102\|Ga0075015_101040824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	503	Open in IMG/M
3300006581\|Ga0074048_13070691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	545	Open in IMG/M
3300006603\|Ga0074064_10006380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	686	Open in IMG/M
3300006806\|Ga0079220_10417697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	883	Open in IMG/M
3300009101\|Ga0105247_11848386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	504	Open in IMG/M
3300009174\|Ga0105241_10198721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1673	Open in IMG/M
3300009520\|Ga0116214_1282341	Not Available	634	Open in IMG/M
3300009553\|Ga0105249_10145571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2276	Open in IMG/M
3300009700\|Ga0116217_10416974	Not Available	850	Open in IMG/M
3300010322\|Ga0134084_10385900	Not Available	543	Open in IMG/M
3300010333\|Ga0134080_10509709	Not Available	573	Open in IMG/M
3300010371\|Ga0134125_10600578	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1216	Open in IMG/M
3300010396\|Ga0134126_12059570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	623	Open in IMG/M
3300010880\|Ga0126350_10163506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2376	Open in IMG/M
3300011270\|Ga0137391_10554408	Not Available	968	Open in IMG/M
3300012210\|Ga0137378_10524083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1093	Open in IMG/M
3300012351\|Ga0137386_10770192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	691	Open in IMG/M
3300012498\|Ga0157345_1039878	Not Available	561	Open in IMG/M
3300012923\|Ga0137359_10352488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1308	Open in IMG/M
3300012987\|Ga0164307_11861255	Not Available	510	Open in IMG/M
3300013104\|Ga0157370_10711606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	916	Open in IMG/M
3300013104\|Ga0157370_10784587	Not Available	867	Open in IMG/M
3300014969\|Ga0157376_10854476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	925	Open in IMG/M
3300015357\|Ga0134072_10362270	Not Available	560	Open in IMG/M
3300016341\|Ga0182035_11301537	Not Available	651	Open in IMG/M
3300017926\|Ga0187807_1024509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1862	Open in IMG/M
3300017930\|Ga0187825_10141546	Not Available	847	Open in IMG/M
3300017961\|Ga0187778_11353579	Not Available	502	Open in IMG/M
3300017974\|Ga0187777_10334167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1040	Open in IMG/M
3300017974\|Ga0187777_11120208	Not Available	573	Open in IMG/M
3300017993\|Ga0187823_10344671	Not Available	529	Open in IMG/M
3300018090\|Ga0187770_10612251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	866	Open in IMG/M
3300021046\|Ga0215015_10876893	Not Available	619	Open in IMG/M
3300021402\|Ga0210385_10896706	Not Available	681	Open in IMG/M
3300021405\|Ga0210387_11001092	Not Available	732	Open in IMG/M
3300021407\|Ga0210383_10863210	Not Available	772	Open in IMG/M
3300021474\|Ga0210390_10063278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3051	Open in IMG/M
3300021478\|Ga0210402_10771129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus → Rhodococcus sp. P27	886	Open in IMG/M
3300021559\|Ga0210409_10749500	Not Available	848	Open in IMG/M
3300021559\|Ga0210409_11181698	Not Available	640	Open in IMG/M
3300022873\|Ga0224550_1057104	Not Available	560	Open in IMG/M
3300025412\|Ga0208194_1055885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	606	Open in IMG/M
3300025911\|Ga0207654_11238801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	544	Open in IMG/M
3300025929\|Ga0207664_10930160	Not Available	780	Open in IMG/M
3300026088\|Ga0207641_11475608	Not Available	681	Open in IMG/M
3300026318\|Ga0209471_1087710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1364	Open in IMG/M
3300026523\|Ga0209808_1264559	Not Available	549	Open in IMG/M
3300027297\|Ga0208241_1057000	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharothrix → Saccharothrix espanaensis → Saccharothrix espanaensis DSM 44229	622	Open in IMG/M
3300027684\|Ga0209626_1108061	Not Available	723	Open in IMG/M
3300027889\|Ga0209380_10516530	Not Available	696	Open in IMG/M
3300030007\|Ga0311338_10468513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1330	Open in IMG/M
3300030739\|Ga0302311_10240000	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1348	Open in IMG/M
3300030880\|Ga0265776_110106	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	556	Open in IMG/M
3300030940\|Ga0265740_1042875	Not Available	538	Open in IMG/M
3300031446\|Ga0170820_10575365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	503	Open in IMG/M
3300031543\|Ga0318516_10661220	Not Available	594	Open in IMG/M
3300031544\|Ga0318534_10388382	Not Available	802	Open in IMG/M
3300031546\|Ga0318538_10244108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	964	Open in IMG/M
3300031573\|Ga0310915_10215526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1345	Open in IMG/M
3300031679\|Ga0318561_10420329	Not Available	735	Open in IMG/M
3300031708\|Ga0310686_106655887	Not Available	922	Open in IMG/M
3300031719\|Ga0306917_10086662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2214	Open in IMG/M
3300031765\|Ga0318554_10321293	Not Available	880	Open in IMG/M
3300031765\|Ga0318554_10510673	Not Available	680	Open in IMG/M
3300031768\|Ga0318509_10075174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1780	Open in IMG/M
3300031769\|Ga0318526_10276583	Not Available	687	Open in IMG/M
3300031781\|Ga0318547_10065318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2001	Open in IMG/M
3300031793\|Ga0318548_10250691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	870	Open in IMG/M
3300031794\|Ga0318503_10144107	Not Available	767	Open in IMG/M
3300031795\|Ga0318557_10211717	Not Available	885	Open in IMG/M
3300031831\|Ga0318564_10016114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3048	Open in IMG/M
3300031835\|Ga0318517_10313643	Not Available	709	Open in IMG/M
3300031845\|Ga0318511_10241087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus → Rhodococcus sp. P27	810	Open in IMG/M
3300031845\|Ga0318511_10309746	Not Available	715	Open in IMG/M
3300031879\|Ga0306919_10981638	Not Available	646	Open in IMG/M
3300031896\|Ga0318551_10776566	Not Available	556	Open in IMG/M
3300032008\|Ga0318562_10166245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1273	Open in IMG/M
3300032008\|Ga0318562_10670204	Not Available	597	Open in IMG/M
3300032041\|Ga0318549_10040526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1885	Open in IMG/M
3300032041\|Ga0318549_10529412	Not Available	529	Open in IMG/M
3300032065\|Ga0318513_10554527	Not Available	562	Open in IMG/M
3300032174\|Ga0307470_10821879	Not Available	722	Open in IMG/M
3300032180\|Ga0307471_102304019	Not Available	679	Open in IMG/M
3300032261\|Ga0306920_101931351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus → Rhodococcus sp. P27	829	Open in IMG/M
3300032261\|Ga0306920_101959151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	822	Open in IMG/M
3300032770\|Ga0335085_11342868	Not Available	752	Open in IMG/M
3300032783\|Ga0335079_10147746	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2639	Open in IMG/M
3300032895\|Ga0335074_10697121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	980	Open in IMG/M
3300033289\|Ga0310914_10399504	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1244	Open in IMG/M
3300033289\|Ga0310914_11424835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus → Rhodococcus sp. P27	596	Open in IMG/M
3300033412\|Ga0310810_10166297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2542	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.24%
Host-Associated	Host-Associated	11.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.33%
Plants	Host-Associated → Plants	11.76%
Aquatic	Environmental → Aquatic	4.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.39%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.84%
Freshwater	Environmental → Aquatic → Freshwater	3.92%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.92%
Peat	Environmental → Terrestrial → Peat	2.94%
Sediment	Environmental → Aquatic → Sediment	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	64.71%
Loam	Environmental → Terrestrial → Soil → Loam	8.82%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.86%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.92%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.92%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.98%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.98%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	39.22%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.57%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.86%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.92%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.94%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.94%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.94%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.98%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.98%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.98%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	31.37%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.90%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.92%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.92%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.94%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.96%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.96%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.96%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.96%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.96%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.98%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.98%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.98%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.98%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.98%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.98%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.98%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459024	Grass soil microbial communities from Rothamsted Park, UK - FD1 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
3300001653	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF041	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006603	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012498	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.3.yng.090410	Host-Associated	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022873	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 10-14	Environmental	Open in IMG/M
3300025412	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10 (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300027297	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF047 (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030739	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3	Environmental	Open in IMG/M
3300030880	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030940	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FD1_08703320	2170459024	Grass Soil	MFERFTDKARTAVIAARAEAAERGDQIRPVYLLHALASGDGVAARALAG
JGI20275J16321_1005713	3300001653	Forest Soil	MFERFTDKARKVVILAKGKATERGDDQIRPVHMLYGLAAADGVAAR
C688J18823_105492523	3300001686	Soil	MFERFTDKARAAVIQARATAAGRGDRMIRPAYLLYAL
Ga0070713_1005331131	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MFERFTDKARTAVIVARAEASERGDQIRPVYLLHALAAGEGVAARALAG
Ga0066681_101814763	3300005451	Soil	MFERFTDKARTAVIAARAEASERGDQIRPEYLLHALAAGEGVAA
Ga0070663_1014215661	3300005455	Corn Rhizosphere	MFERLTDRARAAVIQARATAAERGDQIRPVYLLHAVALGEGTAARALAGLGID
Ga0070698_1019793942	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MFERFTDKARKVVVVVVVLAKGKATERGDDQIRPVHMLYGLAA
Ga0070741_113712371	3300005529	Surface Soil	MFERFTDRARAAVIRARATAAERGDQIRPVYLLHAVALGEGTAARALAGLGIDAG
Ga0070679_1008788923	3300005530	Corn Rhizosphere	MFERFTDRARAAVIRARATAAERGDQIRPVYLLHAVALGE
Ga0068864_1017553153	3300005618	Switchgrass Rhizosphere	MFERLTDRARAAVIQARATAAERGDQIRPVYLLHAVALGEGTA
Ga0068851_105125413	3300005834	Corn Rhizosphere	MFERFTDKAKTAVIAARAEAAERGDQIRPVYLLHALAS
Ga0075015_1010408241	3300006102	Watersheds	MFERFTDKARTVVILAKAKATERGDQIRPVYMLYALASAEGVAA
Ga0074048_130706912	3300006581	Soil	MFERFTDRARTAVILARTEASERGDQIRPVYMLHAL
Ga0074064_100063801	3300006603	Soil	MFERFTDKARTAVIAARAEAAERGDQIRPVYLLHALA
Ga0079220_104176973	3300006806	Agricultural Soil	MFERFTDKARAAVIVARAEASERGDQIRPVYLLHALAAGEGVA
Ga0105247_118483861	3300009101	Switchgrass Rhizosphere	MFERFTDRARAAVIRARATAAERGDQIRPVYLLHAVALGEGTAARALAGLGID
Ga0105241_101987211	3300009174	Corn Rhizosphere	MFERFTDKARTAVIAARAEAAERGDQIRPVYLLHALASGDGV
Ga0116214_12823411	3300009520	Peatlands Soil	MFERFTDKARKVVILAKHKATEQGDAEIRPVHMLY
Ga0105249_101455711	3300009553	Switchgrass Rhizosphere	MFERFTDKARTAVIAARAEAAERGDQIRPVYLLHALAAGDGVAARA
Ga0116217_104169741	3300009700	Peatlands Soil	MFERFTDKARTVVILAKAKATERGDQIRPVYMLYA
Ga0134084_103859001	3300010322	Grasslands Soil	MFERFTDKARTAVIAARAEAAERGDQIRPVYLLHALAA
Ga0134080_105097092	3300010333	Grasslands Soil	MFERFTDKAKTAVILAKADASERGDQIRPVYLLHALAAG
Ga0134125_106005783	3300010371	Terrestrial Soil	MFERFTDKARTAVIVARAEASERSDQIRPVYLLHALAA
Ga0134126_120595702	3300010396	Terrestrial Soil	MFERLTDRARAAVIRARATAAERGDQIRPVYLLHAVA
Ga0126350_101635061	3300010880	Boreal Forest Soil	MFERFTDKARKVVLLAKGKATERGDDQIRPVHLLYGLAAADG
Ga0137391_105544082	3300011270	Vadose Zone Soil	MFERFTDKARTAVILAKAKAAERGDQIRPVYLLHALASGEG*
Ga0137378_105240831	3300012210	Vadose Zone Soil	MFERFTDKARTVVILAKAKATERGDQIRPVYMLHA
Ga0137386_107701922	3300012351	Vadose Zone Soil	MFERFTDKARKVVILAKAKATERGDQIRPVYMLHALASGEGVAARVLA
Ga0157345_10398782	3300012498	Arabidopsis Rhizosphere	MFERFTDRARTAVILARTEASERGDQIRPVYMLHALA
Ga0137359_103524883	3300012923	Vadose Zone Soil	MFERFTDKARTVVILAKARAAERGDQIRPVYMLHALAAGDGVAARALAGPQ
Ga0164307_118612552	3300012987	Soil	MFERFTDRARTVMILARTTAAARGDQIRPVYLLHALT
Ga0157370_107116063	3300013104	Corn Rhizosphere	MFERFTDKAKTAVIAARAEAAERGDQIRPVYLLHALASGDGVAARALAGL
Ga0157370_107845873	3300013104	Corn Rhizosphere	MFERFTDKARTAVIAARAEAAERGDQIRPVYLLHALASGDGVAARALAGL
Ga0157376_108544763	3300014969	Miscanthus Rhizosphere	MFERFTDKARTAVIAARAEAAERGDQIRPVYLLHALACGDGVAARA
Ga0134072_103622702	3300015357	Grasslands Soil	MFERFTDKARTAVIAARAEAAERGDQIRPVYLLHALASGDGVAAR
Ga0182035_113015371	3300016341	Soil	MFERFTDQARSAVSLARAKAAERGDQIRPVYMLYALTCGDGVAARALAGL
Ga0187807_10245092	3300017926	Freshwater Sediment	MFERFTDKARKIVILAKAKATERGDDQIRPVHMLYGWPPPTAWPPGR
Ga0187825_101415462	3300017930	Freshwater Sediment	MFERFTDKARKVVSLALAKAKEQGDDQVRPVHMLYGVTAADGVAARAL
Ga0187778_113535792	3300017961	Tropical Peatland	MFERFTDKARKVVVVAKTAATERGEDQVRPLHMLYGLAATDGVAA
Ga0187777_103341673	3300017974	Tropical Peatland	MFERFTDKARSAVILAKTKATERGDDQIRPLHMLYGLVA
Ga0187777_111202082	3300017974	Tropical Peatland	MFERFTDKARTVVILAKTKATERGDDQIRPEHMLY
Ga0187823_103446712	3300017993	Freshwater Sediment	MFERFTDRARTAVILARTEASERGDQIRPEYMLHALAADEGVA
Ga0187770_106122511	3300018090	Tropical Peatland	MFERFTDKARKVVILAKTKATERGDDQIRPVHMLYGLVSTDGMA
Ga0215015_108768931	3300021046	Soil	MFERFSDQARTVVILAKAKATERGDQIRPVYGLDTGNGQWR
Ga0210385_108967061	3300021402	Soil	MFERFTDKARKVVILAKTKATDRGDDQIGPVHMLYGL
Ga0210387_110010921	3300021405	Soil	MFERFTDRARTAVILARTEASERGDQIRPEYMLHA
Ga0210383_108632102	3300021407	Soil	MFERFTDKARKVVFLAKGKATERGDDQIRPVHMLYGLAA
Ga0210390_100632781	3300021474	Soil	MFERFTDKARKVVILAKGKATERGDDQIRPVHMLYGLAAADGVA
Ga0210402_107711291	3300021478	Soil	MFERFTGNARTVVILAKAKATERGDQIRPVYMLYALASAEGVAARALA
Ga0210409_107495001	3300021559	Soil	MFERFTDKARKVVFLAKGKATERGDDQIRPVHMLY
Ga0210409_111816982	3300021559	Soil	MFERFTDKARTAVIAARAEASERGDQIRPVYLLHALAAGQG
Ga0224550_10571041	3300022873	Soil	MFERFTDKARQVVFLAKGKATERDDDQIRPVHMLYGLAAADGVAARVLT
Ga0208194_10558851	3300025412	Peatland	MFERFTDNARAAVFTARAKAAERGDQIRPLYLLYALAAGEGVAARTLAGLAVDAA
Ga0207654_112388011	3300025911	Corn Rhizosphere	MFERFTDRARAAVIRARATAAERGDQIRPVYLLHAVALGEGTAAR
Ga0207664_109301601	3300025929	Agricultural Soil	MFERFTDKARTAVIAARAEAAERGDQIRPVYLLHAL
Ga0207641_114756081	3300026088	Switchgrass Rhizosphere	MFERFTDKAKTAVIAARAEAAERGDQIRPVYLLHALASGDGVAARALAG
Ga0209471_10877104	3300026318	Soil	MFERFTDKARTAVIVARADASERGDQIRPVYLLHAL
Ga0209808_12645592	3300026523	Soil	MFERFTDKARTAVIVAKAEASERGDQIRPVYLLHAL
Ga0208241_10570001	3300027297	Forest Soil	MFERFTDRARKVVSLALNKAKERGDDQIRPVHMLYGV
Ga0209626_11080613	3300027684	Forest Soil	MFERFTDKARTVVILARAKATERGDQIRPVYMLYALASAEG
Ga0209380_105165301	3300027889	Soil	MFERFTDKARKVVVLAKNKATERGDDQIRPVHMLYGLV
Ga0311338_104685133	3300030007	Palsa	MFERFTDKARGTVFAARAKAAERGDGQIRPVYMLHGLITMDGVAARALAGL
Ga0302311_102400003	3300030739	Palsa	MFERFTDKARQVVFLAKGKATERGDDQIRPVHMLYGLAAADGVAARV
Ga0265776_1101061	3300030880	Soil	MFERFTDKARTVVILARAKATERGDQIRPVYMLYALASAEGVAARVLAS
Ga0265740_10428751	3300030940	Soil	MFERFTDKARKVVLLAKGKATERGDDQIRPVHLLYGLAA
Ga0170820_105753651	3300031446	Forest Soil	MFERFTDKARTAVIVARAEASERGDQIRPVYLLHALAAGQGVAAR
Ga0318516_106612201	3300031543	Soil	MFERFTDRARTAVILARTEASERGDQIRPVYMLHALAS
Ga0318534_103883821	3300031544	Soil	MFERFTDRARKVVILAKTKATERGDDQIRPVHMLYGLVGTDGV
Ga0318538_102441083	3300031546	Soil	MFERFTDRARTAVILARTEASERGDQIRPVYMLHALASVRA
Ga0310915_102155263	3300031573	Soil	MFERFTDRARTAVILARTEASERGDQIRPVYMLHALASGEGVAAQVLAG
Ga0318561_104203291	3300031679	Soil	MFERFTDRARKVVILAKTKATERGDDQIRPVHMLYGLVGTD
Ga0310686_1066558873	3300031708	Soil	MFERFTDKARTVVIAAKTKAQERGDDQIRPAHMLYG
Ga0306917_100866621	3300031719	Soil	MFERFTDKARKVVILATAKATERGEGEIRPVHMLYGVA
Ga0318554_103212931	3300031765	Soil	MFERFTDKARKVVILAKNKATERGDDQIRPVHMLYGLAGTDGVAA
Ga0318554_105106731	3300031765	Soil	MFERFTDQARQVVILAKGQATERGDDQIRPVHMLYGLAAAD
Ga0318509_100751743	3300031768	Soil	MFERFTDRARTAVIAARAEATARGDQIRPVYMLHALASGEG
Ga0318526_102765832	3300031769	Soil	MFERFTDRARTAVILARTEASERGDQIRPVYMLHALASGE
Ga0318547_100653181	3300031781	Soil	MFERFTDRARTAVIMARTEASERGDQIRPVYMLHALASGEGVA
Ga0318548_102506911	3300031793	Soil	MFERFTDRARTAVIMARTEASERGDQIRPVYMLHALASG
Ga0318503_101441072	3300031794	Soil	MFERFTDKARAVVILAKAKATERGDQIRPVYMLHALASAEG
Ga0318557_102117171	3300031795	Soil	MFERFTDKARKVVILAKNKATERGDDQIRPVHILY
Ga0318564_100161145	3300031831	Soil	MFERFTDKARKVVILAKNKATERGDDQIRPVHMLYGLAGTDGVA
Ga0318517_103136431	3300031835	Soil	MFERFTDKARTTVILAKAKATERGDQIRPVYMLHALAAGEGVTARV
Ga0318511_102410871	3300031845	Soil	MFERFTDKARAAVILARTEASERGDQIRPVYLLHARACGEGV
Ga0318511_103097461	3300031845	Soil	MFERFTDKARKVVILAKNKATERGDDQIRPVHILYG
Ga0306919_109816383	3300031879	Soil	MFERFTDKARKVVILAKNKAAERGDDQIRPVHMLY
Ga0318551_107765662	3300031896	Soil	MFERFTDRARTAVILARTEASERGDQIRPVYMLHALASSEGVQHVH
Ga0318562_101662451	3300032008	Soil	MFERFTDKARKVVHLATAKATERGEDEIRPVHMLYGLAA
Ga0318562_106702041	3300032008	Soil	MFERFTDRARTAVILARTEASERGDQIRPVYMLHALASG
Ga0318549_100405261	3300032041	Soil	MFERFTDRARTAVIAARAEATARGDQIRPVYMLHAL
Ga0318549_105294121	3300032041	Soil	MFERFTDKARKVVILAKNKAAERGDDQIRPVHMLYG
Ga0318513_105545271	3300032065	Soil	MFERFTDRARTAVILARTEASERGDQIRPVYMLHALASGEGVAAQVLA
Ga0307470_108218792	3300032174	Hardwood Forest Soil	MFERFTDKAKTAVIVAKADASERGDQIRPVYLLHALAAGEGIASRAL
Ga0307471_1023040191	3300032180	Hardwood Forest Soil	MFERFTDRARTVMILARTTAAARGDQIRPVYLLHALTSAD
Ga0306920_1019313512	3300032261	Soil	MFERFTDKARAVVILAKAKATERGDQIRPVYMLHAL
Ga0306920_1019591511	3300032261	Soil	MFERFTDKARKVVSVAAARAKEQGDDQIRPVHMLYALTATDGV
Ga0335085_113428682	3300032770	Soil	MFERFTGKARTVVILAKAKAAERGDQIRPVYMLHALASAQGVAAR
Ga0335079_101477464	3300032783	Soil	MFERFTDKARTVVILAKAKAAERDDQIRPVYMLYALASGDGVAARVL
Ga0335074_106971213	3300032895	Soil	MFERFTDKARKVVVAARDQAIEQGDDQIRPVHMLYGLAATDGVAGRV
Ga0310914_103995041	3300033289	Soil	MFERFTGRARTVVILAKAEAAERGDQIRPVYLLYALASG
Ga0310914_114248351	3300033289	Soil	MFERFTDKARAVVILAKAKATERGDQIRPVYMLHALASAEGVAARALAGLGVD
Ga0310810_101662971	3300033412	Soil	MFERFTDKARTAVIAARTEAAERGDQIRPVYMLHALAAG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F101101

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences