Metagenome / Metatranscriptome Family F101096

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F101096
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	75 residues
Representative Sequence	LQALKGHVQEYPGCQGFDVFVRAEGDGDVLVHCYTTWDTAGQLEVFLERGYTFERLLADIGSGLSAARSLVMEKVF
Number of Associated Samples	80
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	97.06 %
% of genes from short scaffolds (< 2000 bps)	93.14 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (41.176 % of family members)
Environment Ontology (ENVO)	Unclassified (39.216 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.843 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 16.35% β-sheet: 23.08% Coil/Unstructured: 60.58%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF00115	COX1	11.76
PF03100	CcmE	1.96
PF01578	Cytochrom_C_asm	0.98
PF13442	Cytochrome_CBB3	0.98
PF03597	FixS	0.98
PF00311	PEPcase	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG2332	Cytochrome c biogenesis protein CcmE	Posttranslational modification, protein turnover, chaperones [O]	1.96
COG2352	Phosphoenolpyruvate carboxylase	Energy production and conversion [C]	0.98
COG3197	Cytochrome oxidase maturation protein, CcoS/FixS family	Posttranslational modification, protein turnover, chaperones [O]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	90.20 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.98 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	90.20 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.98 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.98 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.98 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.98 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.98 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Pseudonocardiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales	0.98 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.98 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.98 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.98 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002568\|C688J35102_118804235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	599	Open in IMG/M
3300004006\|Ga0055453_10239052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	576	Open in IMG/M
3300004081\|Ga0063454_101319049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	606	Open in IMG/M
3300004157\|Ga0062590_101333645	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	709	Open in IMG/M
3300004479\|Ga0062595_102614307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	506	Open in IMG/M
3300005175\|Ga0066673_10733724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	567	Open in IMG/M
3300005178\|Ga0066688_10387647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	906	Open in IMG/M
3300005364\|Ga0070673_100488539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1112	Open in IMG/M
3300005440\|Ga0070705_101817812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	517	Open in IMG/M
3300005456\|Ga0070678_100793598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	859	Open in IMG/M
3300005529\|Ga0070741_11140132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	661	Open in IMG/M
3300005546\|Ga0070696_100146018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1733	Open in IMG/M
3300005558\|Ga0066698_10226847	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1284	Open in IMG/M
3300006606\|Ga0074062_12847945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	697	Open in IMG/M
3300006755\|Ga0079222_10965524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	726	Open in IMG/M
3300006794\|Ga0066658_10697720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	560	Open in IMG/M
3300006796\|Ga0066665_10708805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	797	Open in IMG/M
3300009012\|Ga0066710_101762578	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	938	Open in IMG/M
3300009012\|Ga0066710_102801550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	689	Open in IMG/M
3300009137\|Ga0066709_101931075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	820	Open in IMG/M
3300009137\|Ga0066709_102310460	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	736	Open in IMG/M
3300010147\|Ga0126319_1269238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1106	Open in IMG/M
3300010154\|Ga0127503_10168967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1457	Open in IMG/M
3300010322\|Ga0134084_10457433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	509	Open in IMG/M
3300012203\|Ga0137399_10007681	All Organisms → cellular organisms → Bacteria	6203	Open in IMG/M
3300012205\|Ga0137362_10699523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	871	Open in IMG/M
3300012350\|Ga0137372_10394539	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300012355\|Ga0137369_10013339	All Organisms → cellular organisms → Bacteria	7987	Open in IMG/M
3300012355\|Ga0137369_10806270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	639	Open in IMG/M
3300012356\|Ga0137371_10887438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	678	Open in IMG/M
3300012358\|Ga0137368_10427498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	865	Open in IMG/M
3300012362\|Ga0137361_10030453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4264	Open in IMG/M
3300012987\|Ga0164307_10200416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1358	Open in IMG/M
3300012989\|Ga0164305_10854915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	760	Open in IMG/M
3300013501\|Ga0120154_1039431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1154	Open in IMG/M
3300013768\|Ga0120155_1124898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	707	Open in IMG/M
3300014968\|Ga0157379_11215538	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	725	Open in IMG/M
3300015077\|Ga0173483_10275723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	812	Open in IMG/M
3300018027\|Ga0184605_10287783	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	745	Open in IMG/M
3300018027\|Ga0184605_10466164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	554	Open in IMG/M
3300018054\|Ga0184621_10007518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3051	Open in IMG/M
3300018054\|Ga0184621_10050404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1389	Open in IMG/M
3300018054\|Ga0184621_10163434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	801	Open in IMG/M
3300018061\|Ga0184619_10154632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1047	Open in IMG/M
3300018071\|Ga0184618_10162279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	919	Open in IMG/M
3300018071\|Ga0184618_10174001	All Organisms → cellular organisms → Bacteria	890	Open in IMG/M
3300018073\|Ga0184624_10138619	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1063	Open in IMG/M
3300018075\|Ga0184632_10191428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	901	Open in IMG/M
3300018075\|Ga0184632_10427270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	552	Open in IMG/M
3300018482\|Ga0066669_12358615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	509	Open in IMG/M
3300019269\|Ga0184644_1571295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	782	Open in IMG/M
3300021073\|Ga0210378_10146367	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	913	Open in IMG/M
3300021080\|Ga0210382_10083515	All Organisms → cellular organisms → Bacteria	1311	Open in IMG/M
3300021080\|Ga0210382_10116015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1127	Open in IMG/M
3300021080\|Ga0210382_10250561	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	775	Open in IMG/M
3300021344\|Ga0193719_10361589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	603	Open in IMG/M
3300022534\|Ga0224452_1048630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1257	Open in IMG/M
3300025556\|Ga0210120_1099579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	579	Open in IMG/M
3300026295\|Ga0209234_1120729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	966	Open in IMG/M
3300026547\|Ga0209156_10455295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	529	Open in IMG/M
3300028536\|Ga0137415_10762540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	778	Open in IMG/M
3300028704\|Ga0307321_1043201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	844	Open in IMG/M
3300028708\|Ga0307295_10260359	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	501	Open in IMG/M
3300028711\|Ga0307293_10260650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	550	Open in IMG/M
3300028712\|Ga0307285_10035822	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1203	Open in IMG/M
3300028713\|Ga0307303_10118813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	617	Open in IMG/M
3300028715\|Ga0307313_10001614	All Organisms → cellular organisms → Bacteria	4836	Open in IMG/M
3300028718\|Ga0307307_10286396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	529	Open in IMG/M
3300028719\|Ga0307301_10214219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	626	Open in IMG/M
3300028721\|Ga0307315_10069492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1004	Open in IMG/M
3300028721\|Ga0307315_10303172	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	507	Open in IMG/M
3300028722\|Ga0307319_10014691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2392	Open in IMG/M
3300028755\|Ga0307316_10006172	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3697	Open in IMG/M
3300028755\|Ga0307316_10110605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	964	Open in IMG/M
3300028784\|Ga0307282_10045308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1949	Open in IMG/M
3300028787\|Ga0307323_10085810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1124	Open in IMG/M
3300028799\|Ga0307284_10110082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1037	Open in IMG/M
3300028799\|Ga0307284_10355861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	593	Open in IMG/M
3300028811\|Ga0307292_10088184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1207	Open in IMG/M
3300028811\|Ga0307292_10289969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	684	Open in IMG/M
3300028811\|Ga0307292_10413945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	574	Open in IMG/M
3300028814\|Ga0307302_10055827	All Organisms → cellular organisms → Bacteria	1842	Open in IMG/M
3300028819\|Ga0307296_10577319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	615	Open in IMG/M
3300028824\|Ga0307310_10392031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	688	Open in IMG/M
3300028824\|Ga0307310_10489292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	619	Open in IMG/M
3300028824\|Ga0307310_10662916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	534	Open in IMG/M
3300028828\|Ga0307312_10844546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	607	Open in IMG/M
3300028876\|Ga0307286_10105221	All Organisms → cellular organisms → Bacteria	993	Open in IMG/M
3300028876\|Ga0307286_10119123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	935	Open in IMG/M
3300028881\|Ga0307277_10443939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	581	Open in IMG/M
3300028881\|Ga0307277_10567570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	509	Open in IMG/M
3300028881\|Ga0307277_10587378	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	500	Open in IMG/M
3300028884\|Ga0307308_10217047	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300031091\|Ga0308201_10347768	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	543	Open in IMG/M
3300031091\|Ga0308201_10372526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	529	Open in IMG/M
3300031114\|Ga0308187_10420232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	533	Open in IMG/M
3300031152\|Ga0307501_10213545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	558	Open in IMG/M
3300031421\|Ga0308194_10217856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	626	Open in IMG/M
3300031421\|Ga0308194_10346400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	528	Open in IMG/M
3300031938\|Ga0308175_102396620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	591	Open in IMG/M
3300031996\|Ga0308176_11826117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	649	Open in IMG/M
3300032005\|Ga0307411_11040576	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	735	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.08%
Host-Associated	Host-Associated	3.92%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.49%
Aquatic	Environmental → Aquatic	20.59%
Plants	Host-Associated → Plants	3.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.49%
Sediment	Environmental → Aquatic → Sediment	11.76%
Freshwater	Environmental → Aquatic → Freshwater	6.86%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.94%
Marine	Environmental → Aquatic → Marine	1.96%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.59%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	11.76%
Sediment	Environmental → Aquatic → Freshwater → Sediment	4.90%
Loam	Environmental → Terrestrial → Soil → Loam	4.90%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.96%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.96%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.98%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	52.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	11.76%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.78%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	4.90%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.94%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.94%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.96%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.96%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.96%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	41.18%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	10.78%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.82%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.88%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	4.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.90%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.94%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.96%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.96%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.96%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.98%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.98%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004006	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragA_D2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013501	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0.25M	Environmental	Open in IMG/M
3300013768	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0M	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019269	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300025556	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragA_D2 (SPAdes)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028704	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_379	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J35102_1188042351	3300002568	Soil	TLYASLQALKAHVQEYPGCQRFDVFFRAERDAAVRVHCYTTWDTLEQLEVFLDRGYTFERLLDDVSEQIRLERSLVMEKVF*
Ga0055453_102390523	3300004006	Natural And Restored Wetlands	GCQRFDVYFHAAPDEAVRLHCYTSWDTLDQLEAFLERGYTFERLMADFEGDIDLERSLVMEKIF*
Ga0063454_1013190491	3300004081	Soil	ASLQALKGHVQEYPGCQRFDVYFRADPDERIRIHVYTSWDTLPQLEAFLERGYTFERLMGDFGGEVELERSIVMEKIF*
Ga0062590_1013336451	3300004157	Soil	LYASLQALKGHVQEYPGCQRFDVFFRAEPEAAVRVHCYTTWDTLEQLEVYLDRGYTFERMLGDVSEEIRLERSMVMEKAF*
Ga0062595_1026143072	3300004479	Soil	SLQALKGHVQEYPGCQRFDVFVRAEDNGTLVHCYTTWDTPGQLEVYLERGYTLERLLADVAPDLSARRTLVMEKVF*
Ga0066673_107337243	3300005175	Soil	KAHVQEYPGCQRFDVFFRAEPTSRYRVHCYTTWDTAAQLEAFLERGYTFERLIEDVGGDIVLERSLVMEKVF*
Ga0066688_103876471	3300005178	Soil	DLYASLQAFKGHVQEYPGCESFDVFVRAEADGFLVQCYTTWDTLVQLEAFLERGYTFERMLADVAGIRPEPTRMMEKVF*
Ga0070673_1004885391	3300005364	Switchgrass Rhizosphere	ALKGHVQEYPGCQNFDVFVRAEGDGDVLVHCYTTWDTAGQLEVFLERGYTFERLLADIGSGLTPTRSLVMEKVF*
Ga0070705_1018178121	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	KGHVQEYPGCQRFDVFIRAEDAGDVRIHCYTTWDTPWQLEAFLERGYTLERLLADFGDLSAERSLVMEKVF*
Ga0070678_1007935981	3300005456	Miscanthus Rhizosphere	YPGCQNFDVFVRAEGDGDVLVHCYTTWDTAGQLEVFLERGYTFERLLADIGSGLTPTRSLVMEKVF*
Ga0070741_111401323	3300005529	Surface Soil	YASLQALKGHVQEYPGCQSFDVFVRAEADGVLVHCYTTWDTLVQLEAFLERGYTFERLLADLEGAEPERSLVMEKIF*
Ga0070696_1001460183	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	EWPTVYSSLQALKGHVQEYPGCQGFDVFVRAEGDGDVLVHCYTTWDTAGQLEVFLERGYTLERLLADIGSGLSPARSLVMEKVF*
Ga0066698_102268471	3300005558	Soil	YPGCQNFDVFVRAEGDGDVLVHCYTTWDTRGQLEAFLERGYTFDRLLADTGSGLGPARSLVMEKVF*
Ga0074062_128479453	3300006606	Soil	LWATVYASLQALKGHVQEYPGCQNFDVFVRAEGDGDVLVHCYTTWDTAGQLEVFLERGYTFERLLADIGSGLTPTRSLVMEKVF*
Ga0079222_109655243	3300006755	Agricultural Soil	QEYPGCAGFDVFFHAEADASVRLHCYTVWDTEAQLEAFLERGYTFERMLSDLSGQIGLDRSLVMEKLF*
Ga0066658_106977201	3300006794	Soil	HVQEYPGCQRFDVYFRAEPDERIRIHVYTSWDTLPQLEAFLERGYTFERLIGDFGGEVELERSIVMEKIF*
Ga0066665_107088053	3300006796	Soil	PGCQSFDVFVRVEAEVVRVHCYTTWDTPAQLEAFLERGYTFERLLADLGGVEPERSLVMEKIF*
Ga0066710_1017625783	3300009012	Grasslands Soil	QALKGHVQEYPGCQGFDVFVRVDENETLIHCYTTWDTPAQLEVFLERGYTFERLLADIGPGLDAKRTLVLEKVF
Ga0066710_1028015501	3300009012	Grasslands Soil	GVYASLQALKGHVQEYPGCQRFDVFIRAETDGSVRVHCYTTWDTPAQLEAFLERGYTFERLLADFGALETERSLVMEKVF
Ga0066709_1019310751	3300009137	Grasslands Soil	LQALKGHVQEYPGCQSFDVFVRAEGDGDVLVHCYTTWDTPGQLEVFLERGYTFERLLADLGSGLTAARSLVMEKVF*
Ga0066709_1023104601	3300009137	Grasslands Soil	QSFDVFVRAEGDGDVLVHCYTTWDTPGQLEVFLERGYTFDRLLADIGSGLSAARSLVMEKVF*
Ga0126319_12692381	3300010147	Soil	QWPIVYSSLQALKGHVQEYPGCQSFDVFVRAEGAGDVLVHCYTTWDTPGQLEVFLERGYTFERLLADIGNGLEATRSLVMEKVF*
Ga0127503_101689671	3300010154	Soil	LQALKGHVQEYPGCQSFDVFVRAEGAGDVLVHCYTTWDTQGQLEVFLERGYTFERLLADIGSGLEARRSLVMEKVF*
Ga0134084_104574333	3300010322	Grasslands Soil	HVQEYPGCQRFDVFVRTENGGDTLVHCYTTWDTPSQLEVFLERGYTFERLLADVGSGLDARRSLVMEKVF*
Ga0137399_100076816	3300012203	Vadose Zone Soil	YPGCQSFDVFVRAEGDGDVLVHCYTTWDSAGQLEVFLERGYTFERLLGDIGSGLSPERSLVMEKVF*
Ga0137362_106995233	3300012205	Vadose Zone Soil	PGCQRFDVFVRAEGDGDVLVHCYTTWDSAGQLEVFLERGYTFERLLADIGSGLSAQRSLVMEKVF*
Ga0137372_103945391	3300012350	Vadose Zone Soil	PGCQRFDVYFRAQADEAVLIHCYTSWDTVGQLEAFLERGYTFERLIGDFGGELELERSLVMEKIF*
Ga0137369_100133398	3300012355	Vadose Zone Soil	LKGHVQEYPGCQRFDVFVRAETDGSVRIHCYTTWDTPSQLEAFLERGYTFERLLADFGTGLETERSLVMEKIF*
Ga0137369_108062703	3300012355	Vadose Zone Soil	WENLYASLQALKGHVQEYPGCQRIDVFVRAEVSGEVRIHCYTTWDTLAQLEAFLERGYTFERLLADLGGSEPEKSLVMEKVF*
Ga0137371_108874381	3300012356	Vadose Zone Soil	AQEYPGCQRFDVYFRAEPDEAVLIHCYTSWDTVGQLEAFLERGYTFERMLADHGLDAEESLVMEKVF*
Ga0137368_104274981	3300012358	Vadose Zone Soil	ALKGHVQEYPGCQGFDVFVSAETEGDVIVHCYTTWDTPGQLEVFLERGYTFERLLADIGPGSEPRRALVMEKVF*
Ga0137361_100304533	3300012362	Vadose Zone Soil	MWGTVYSSLQALKGHVQEYPGCQSFDVFVRAEGVGDVLVHCYTTWDTAGQLEVFLERGYTFERLLADIGSGLSAQRSLVMEKVF*
Ga0164307_102004163	3300012987	Soil	FDVFVRAEGDGDVLVHCYTTWDTAGQLEVFLERGYTFERLLADIGSGLTATRSLVMEKVF
Ga0164305_108549151	3300012989	Soil	ADWPRFYGSLQALKGHVQEYPGCQRFDAFFRAAPDEAVRVHCYTTWDTLEQLEAFLERGYTLERLLADFGGAIELERSLVMEKIF*
Ga0120154_10394313	3300013501	Permafrost	WHVQESPGCQRFDVFFRAAPEEAVRVHCYTVWDTPEQLEAFLERGYTFERMLANVADVEPGESLIMEKVF*
Ga0120155_11248983	3300013768	Permafrost	HVQEYPGCQRFDVFVRTERDGKTHLHCYTTWDTPGQLEVYLERGYTLERLLADLGRGIVAERSLVMEKVF*
Ga0157379_112155383	3300014968	Switchgrass Rhizosphere	QNFDVFVRAEGDGDVLVHCYTTWDTAGQLEVFLERGYTFERLLADIGSGLTPTRSLVMEKVF*
Ga0173483_102757231	3300015077	Soil	AEWPTVYSSLQALKGHVQEYPGCQGFDVFVRAEGGGDVLVQCYTTWDTAGQLEVFLERGYTFERLLADIGSGLGPGRSLVMEKVF*
Ga0184605_102877833	3300018027	Groundwater Sediment	QALKGHVQEYPGCQRFDVFVRAETDGETLVHCYTTWDTPAQLEVFLERGYTFERMLADIGSGLAAERTMVMEKVF
Ga0184605_104661641	3300018027	Groundwater Sediment	SLYASLQTLKAHVQEYPGCQRFELFVRAQDDGDMRVHCYTTWDTPWQLEAFLERGYTFERLLADFGGLSAERSLVMEKVF
Ga0184621_100075184	3300018054	Groundwater Sediment	VYSSLQALKGHVQEYPGCQGFDVFVRAEGDGDVLVHCYTTWDTPGQLEVFLERGYTLERLLADIGSGLSAARSLVMEKVF
Ga0184621_100504044	3300018054	Groundwater Sediment	VYASLQALKGHVQEYPGCQRFDVFVRIEDSGATLVHCYTTWDTPAQLEVFLERGYTFERLLADIGEGLDIQRTLAMEKVF
Ga0184621_101634343	3300018054	Groundwater Sediment	DGEWPAIYASLQALKAHVQEYPGCQGFDVFVRAEGDGDVLVNCYTTWDTAGQLEVFLERGYTFERLLADIESGLGPVRSLVMEKVF
Ga0184619_101546323	3300018061	Groundwater Sediment	ASLQTLKAHVQEYPGCQRFDVFIRAEDNGDIRIHCYTTWDTPWQLEAFLERGYTFERLLADFGGLEPVRSLVMEKVF
Ga0184618_101622793	3300018071	Groundwater Sediment	VLYSSLQALKGHVQEYPGCQRFDVFFRAQPEDSVRVHCYTTWDTLAQLEAFLERGYTFERLLADVGGDISLERSLVMEKVF
Ga0184618_101740011	3300018071	Groundwater Sediment	QALKAHVQEYPGCERFDVFFYAEPGESVRVHCYTTWDTLVQLEAFLERGYTFERLLADVDADIKLERSLVMEKVF
Ga0184624_101386193	3300018073	Groundwater Sediment	RWEDLYASMQSLKAHVQEYPGCQRFDVFVRAQDNGDVLLHCYTTWDTPTQLEAFLERGYTLERLLADFGGLAAERSLVMEKVF
Ga0184632_101914283	3300018075	Groundwater Sediment	SSLQALKGHVQEYPGCQSFDVFVRVEAGGDVRVHCYTTWDTYVQLEAFLERGYTFERLLADSGDGLEIERSLTMEKVF
Ga0184632_104272703	3300018075	Groundwater Sediment	WEELYASLQALKGHVQEYPGCERFDVFVRVEGDGDVRVHCYTTWDTPGQLEAFLERGYTFERLLADFGGLEAERSLVMDKIF
Ga0066669_123586152	3300018482	Grasslands Soil	VPVEYGRTRYGSLQALKAHVQEYPGCEGFDVFFTEGATNERYQIHCYTTWDTLAQLEAFLERGYTFERLIADVGGEIEVTRSLVMEKVF
Ga0184644_15712953	3300019269	Groundwater Sediment	LKGHVQEYPGCQGFDVFVRVEAGGDVRVQCYTTWDTYVQLEAFLERGYTFERLLADFGDGLEIERSLTMEKVF
Ga0210378_101463671	3300021073	Groundwater Sediment	PEQWPVLYSSLQALKGHVQEYPGCQRFDVFVRVEDEGDTLVHCYTTWDTPAQLEVFLERGYTFERLLADIGGGIDVRRSLVMEKVF
Ga0210382_100835151	3300021080	Groundwater Sediment	GHLHEYPGLQRFDVYFRAASDEAVRVHGYTSWDTLPQLEAFLERGYTFERLIADLGADIQVERSLVMERIF
Ga0210382_101160151	3300021080	Groundwater Sediment	WPALYSSLQALKGHVQEYPGCQSFDVFVRVEAGGDVRVQCYTTWDTYVQLEAFLERGYTFERLLADFGDGLEIERSLTMEKVF
Ga0210382_102505611	3300021080	Groundwater Sediment	ESLYASLQTLKAHVQEYPGCQRFDVFIRAEENGDVRLHCYTTWDTPWQLEAFLERGYTFERMLADFGGLGAERSFVMQKVF
Ga0193719_103615891	3300021344	Soil	KGHVQEYPGCQRFDVFVRIEDSGATLVHCYTTWDTAAQLEVFLERGYTFERLLADIGEGLDIQRTLVMEKVF
Ga0224452_10486301	3300022534	Groundwater Sediment	YASMQSLKAHVQEYPGCQRFDVFVRAQDNGDVLLHCYTTWDTPTQLEAFLERGYTLERLLADFGGLAAERSLVMEKVF
Ga0210120_10995793	3300025556	Natural And Restored Wetlands	PGCQRFDVYFHAAPDEAVRLHCYTSWDTLDQLEAFLERGYTFERLMADFEGDIDLERSLVMEKIF
Ga0209234_11207291	3300026295	Grasslands Soil	YSSLQALKGHVQEYPGCQSFDVFVRAEGDGDVLVHCYTTWDTPAQLEVFLERGYTFERLLADLGSGLTAARSLVMEKVF
Ga0209156_104552951	3300026547	Soil	KGHVQEYPGCQRFDVFVRAEDTGDMRIHCYTTWDTPVQLEAFLERGYTFERLLADFGGLAAKESLVMEKIF
Ga0137415_107625403	3300028536	Vadose Zone Soil	YPGCQSFDVFVRAEGDGDVLVHCYTTWDSAGQLEVFLERGYTFERLLGDIGSGLSPERSLVMEKVF
Ga0307321_10432013	3300028704	Soil	AEWPTVYSSLQALKGHVQEYPGCQGFDVFVRAEGDGDVLVHCYTTWDTAGQLEVFLERGYTFERLLADIGSGISPARSLVMEKVF
Ga0307295_102603591	3300028708	Soil	CQGFDVFVRAEGDGDVLVNCYTTWDTAGQLEVFLERGYTFERLLADIGSGLGPARSLVMEKVF
Ga0307293_102606501	3300028711	Soil	LQALKGHVQEYPGCQGFDVFVRAEDDGSALIHCYTTWDTPGQLEVFLERGYTFERLLADVRPGLDAKRTLVMEKVF
Ga0307285_100358221	3300028712	Soil	LYASMQSLKAHVQEYPGCQRFDVFVRAQENGDVLLHCYTTWDTPTQLEAFLERGYTLERLLADFGGLAAERSLVMEKVF
Ga0307303_101188131	3300028713	Soil	WPTVYSSLQALKGHVQEYPGCQGFDVFVRAEGDGDVLVQCYTTWDTAGQLEVFLERGYTLERLLADIGSGLGPVRSLVMEKVF
Ga0307313_100016141	3300028715	Soil	KGHVQEYPGCQGFDVFVRAEGDGDVLVHCYTTWDTAGQLEVFLERGYTFERLLADIGSGLSAARSLVMEKVF
Ga0307307_102863961	3300028718	Soil	PTVYSSLQALKGHVQEYPGCQGFDVFVRAEGDGDVLVNCYTTWDTAGQLEVFLERGYTFERLLADIGSGLGPARSLVMEKVF
Ga0307301_102142191	3300028719	Soil	ANQWQRVYASLQALKGHVQEYPGCQRFDVFVRIEDSGATLVHCYTTWDTPAQLEVFLERGYTFERLLADIGEGLDIQRTLVMEKVF
Ga0307315_100694921	3300028721	Soil	LKAHVQEYPGCQRFDVFVRAQDNGDVLLHCYTTWDTPTQLEAFLERGYTLERLLADFGGLAAERSLVMEKVF
Ga0307315_103031721	3300028721	Soil	ALKAHVQEYPGCQGFDVFFHADPAEAVRLHCYTSWDTEAQLEAFLERGYTFERMLSDLSEDITLERSLVMEKLF
Ga0307319_100146911	3300028722	Soil	LQALKGHVQEYPGCQGFDVFVRAEGDGDVLVHCYTTWDTAGQLEVFLERGYTFERLLADIGSGLSAARSLVMEKVF
Ga0307316_100061721	3300028755	Soil	LYASMQSLKAHVQEYPGCQRFDVFVRAQDNGDVLLHCYTTWDTPTQLEAFLERGYTLERLLADFGGLAAERSLVMEKVF
Ga0307316_101106053	3300028755	Soil	WARLYASLQALKGHAQEYPGCQRFDVYFRAEPDAAVLIHCYTSWDTAWQLEAFLERGYTFERLIGDFGGEIKLERSLVMEKIF
Ga0307282_100453081	3300028784	Soil	WPTVYSSLQALKGHVQEYPGCQSFDVFVRAEGNGDVLVHCYTTWDTPGQLEVFLERGYTFERLLADVGTGLSPSRSLVMEKVF
Ga0307323_100858103	3300028787	Soil	QGFDVFVRAEGDGDVLVHCYTTWDTAGQLEVFLERGYTFERLLADIGSGISPARSLVMEKVF
Ga0307284_101100823	3300028799	Soil	LYASLQTLKAHVQEYPGCQRFDVFIRAEDNGDIRIHCYTTWDTPWQLEAFLERGYTFERLLADFGGLEPVRSLVMEKVF
Ga0307284_103558611	3300028799	Soil	ALKGHAQEYPGCQRFDVYFRAEPDEQVLIHCYTSWDTVGQLEAFLERGYTFERLIGDFGGEITLERSLVMEKIF
Ga0307292_100881843	3300028811	Soil	ANQWQRVYASLQALKGHVQEYPGCQRFDVFVRIEDSGATLVHCYTTWDTPAQLEVFLERGYTFERLLADIGEGLDIQRTLAMEKVF
Ga0307292_102899693	3300028811	Soil	KGHAQEYPGCQRFDVYFRAQADEAVLIHCYTSWDTVGQLEAFLERGYTFERLIGDFGGEIKLERSLVMEKIF
Ga0307292_104139453	3300028811	Soil	LKGHVQEYPGCQGFDVFVRAEDDGSALIHCYTTWDTPGQLEVFLERGYTFERLLADVRPGLDAKRTLVMEKAF
Ga0307302_100558271	3300028814	Soil	KGHVQEYPGCQRFDVFVRAEADGQVLVHCYTTWDTPQQLEAFIERGYTFERLLADFGGANAERSLVMEKVF
Ga0307296_105773193	3300028819	Soil	YPGCQRFDVFVRIEDSGATLVHCYTTWDTPAQLEVFLERGYTFERLLADIGEGLDIQRTLAMEKVF
Ga0307310_103920311	3300028824	Soil	SLQALKGHAQEYPGCQRFDVYFRAQADEAVLIHCYTSWDTVGQLEAFLERGYTFERLIGDFGGEIKLERSLVMEKIF
Ga0307310_104892923	3300028824	Soil	LYASLQTLKAHVQEYPGCERFDVFVRAQDDGDIRVHLYTTWDTPWQLEAFLERGYTFERLLADFGGLSAERSLIMEKVF
Ga0307310_106629163	3300028824	Soil	AAREWEGLYTSLQTLKGHVQEYPGCQRFDVFIRAEDDGAVRIHCYTTWDTPWQLEAFLERGYTLEGLLADFGSLSAERSLVMEKVF
Ga0307312_108445461	3300028828	Soil	SLQALKGHVQEYPGCQRFDVFVRIEDSGATLVHCYTTWDTPAQLEVFLERGYTFERLLADIGEGLDIQRTLVMEKVF
Ga0307286_101052211	3300028876	Soil	LKGHVQEYPGCQRFDVFVRIEDSGATLVHCYTTWDTPAQLEVFLERGYTFERLLADIGEGLDIQRTLVMEKVF
Ga0307286_101191231	3300028876	Soil	EWPALYSSLQALKGHVQEYPGCQGFDVFVRVEAGGDVRVQCYTTWDTYVQLEAFLERGYTFERLLADFGDGLEIERSLTMEKVF
Ga0307277_104439391	3300028881	Soil	KGHVQEYPGCQGFDVFVRAEGDGDVLVHCYTTWDTAGQLEVFLERGYTFERLLADIGSGLGPGRSLVMEKVF
Ga0307277_105675702	3300028881	Soil	ANEDWARLYGSLQALKGHVQEYPGCQRFDVFIRAAPEEAVRIHCYTSWDTLGQLEAFLERGYTFERLIADLGGGIELERSLVMEKIF
Ga0307277_105873781	3300028881	Soil	CQRFDVYFRAEPDEQVLIHCYTSWDTVGQLEAFLERGYTFERLIGDFGGEITLERSLVMEKIF
Ga0307308_102170473	3300028884	Soil	PGCERFDVFFYAEPGESVRVHCYTTWDTLVQLEAFLERGYTFERLLADVDADIKLERSLVMEKVF
Ga0308201_103477683	3300031091	Soil	GCQGFDVFVRAEGDGDVLVNCYTTWDTAGQLEVFLERGYTFERLLADIGSGLGPVRSLVMEKVF
Ga0308201_103725261	3300031091	Soil	LYASLQTLKAHVQEYPGCQRFELFVRAQDDGDMRVHCYTTWDTPWQLEAFLERGYTLERLLADFGKLSAERSLVMEKVF
Ga0308187_104202321	3300031114	Soil	HVQEYPGCQSFDVFVRAEGDGDVLVHCYTTWDTPGQLEVFLERGYTFERLLADVGSGLTPSRSLVMEKVF
Ga0307501_102135451	3300031152	Soil	EYPGCERFDVFFYAEPGDSVRVHCYTTWDTLVQLEAFLERGYTFERLLADVDADIKLERSIVMEKVF
Ga0308194_102178563	3300031421	Soil	WGALYGSLQALKGHVQEYPGCQRFDVFVRAETDGETLVHCYTTWDTPAQLEVFLERGYTFERMLADIGSGLAAERTMVMEKVF
Ga0308194_103464001	3300031421	Soil	MQALKAHVQEYPGCQRFDVFIRAEESGSLRVHCYTTWDTPWQLEAFLERGYTFERLLADFGGLEAERSLVMEKIF
Ga0308175_1023966201	3300031938	Soil	FDVYFRAAPDEAVRLHCYTSWDTVDQLEAFLERGYTFERLMSDFEGEIELERSLVMEKIF
Ga0308176_118261173	3300031996	Soil	EWEDLYASLQAFKGHVQEYPGCQRFDIFVRAEREGGVRVHCYTTWDTPDQMEAYLERGYTFERLLADFGAGLEPERSLVMEKVF
Ga0307411_110405761	3300032005	Rhizosphere	LKGHVQEYPGCQRFDVFLRAENEGDVLIHCYTTWDTPDQVEAFLERGYTFDRLLADVGENLESERTLLMEKVF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F101096

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences