Metagenome / Metatranscriptome Family F101023

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F101023
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	61 residues
Representative Sequence	MSTFKHLDGMVALLSEVYEINERIMTGDICSAKTAIASTRMKKLLHHYHEALHEDGAVKVSLQ
Number of Associated Samples	87
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	45.10 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	91.18 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.65

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (47.059 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater (15.686 % of family members)
Environment Ontology (ENVO)	Unclassified (55.882 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (51.961 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.05% β-sheet: 0.00% Coil/Unstructured: 54.95%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.65
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.65
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF00145	DNA_methylase	3.92
PF14743	DNA_ligase_OB_2	1.96
PF13508	Acetyltransf_7	1.96
PF10269	Tmemb_185A	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0270	DNA-cytosine methylase	Replication, recombination and repair [L]	3.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.12 %
Unclassified	root	N/A	5.88 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	47.06 %
cellular organisms	root	All Organisms → cellular organisms	47.06 %
Unclassified	root	N/A	5.88 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	47.06 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	42.16 %
Unclassified	root	N/A	5.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.90 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	45.10 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	42.16 %
Unclassified	root	N/A	5.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.90 %

Name	Rank	Taxonomy	Distribution
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	45.10 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	42.16 %
Unclassified	root	N/A	5.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.90 %

Name	Rank	Taxonomy	Distribution
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	45.10 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	42.16 %
Unclassified	root	N/A	5.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.90 %

Name	Rank	Taxonomy	Distribution
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	45.10 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	42.16 %
Unclassified	root	N/A	5.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.90 %

Name	Rank	Taxonomy	Distribution
Aphanizomenonaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae	45.10 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	42.16 %
Unclassified	root	N/A	5.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.90 %

Name	Rank	Taxonomy	Distribution
Aphanizomenon	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon	45.10 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	42.16 %
Unclassified	root	N/A	5.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.90 %

Name	Rank	Taxonomy	Distribution
Aphanizomenon flos-aquae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae	45.10 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	42.16 %
Unclassified	root	N/A	5.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.90 %

Name	Rank	Taxonomy	Distribution
Aphanizomenon flos-aquae WA102	isolate	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	45.10 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	42.16 %
Unclassified	root	N/A	5.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003860\|Ga0031658_1054404	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	694	Open in IMG/M
3300004481\|Ga0069718_15901007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	531	Open in IMG/M
3300006641\|Ga0075471_10184678	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	1091	Open in IMG/M
3300006803\|Ga0075467_10534130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	602	Open in IMG/M
3300006805\|Ga0075464_10065676	Not Available	2034	Open in IMG/M
3300006805\|Ga0075464_10882482	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	558	Open in IMG/M
3300006875\|Ga0075473_10289470	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	663	Open in IMG/M
3300006920\|Ga0070748_1343341	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	527	Open in IMG/M
3300007234\|Ga0075460_10152868	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	804	Open in IMG/M
3300007540\|Ga0099847_1206150	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	572	Open in IMG/M
3300007555\|Ga0102817_1028247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	1238	Open in IMG/M
3300007636\|Ga0102856_1035988	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	761	Open in IMG/M
3300008259\|Ga0114841_1265474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	545	Open in IMG/M
3300008263\|Ga0114349_1012081	All Organisms → Viruses → Predicted Viral	4345	Open in IMG/M
3300008266\|Ga0114363_1123105	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	898	Open in IMG/M
3300008450\|Ga0114880_1061569	All Organisms → cellular organisms → Bacteria	1549	Open in IMG/M
3300008450\|Ga0114880_1130203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	933	Open in IMG/M
3300009068\|Ga0114973_10357601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	770	Open in IMG/M
3300009081\|Ga0105098_10290050	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	783	Open in IMG/M
3300009151\|Ga0114962_10347161	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	815	Open in IMG/M
3300009151\|Ga0114962_10380798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	768	Open in IMG/M
3300009151\|Ga0114962_10403824	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	739	Open in IMG/M
3300009152\|Ga0114980_10481791	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	707	Open in IMG/M
3300009158\|Ga0114977_10497443	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	668	Open in IMG/M
3300009160\|Ga0114981_10381449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	760	Open in IMG/M
3300009164\|Ga0114975_10719701	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	526	Open in IMG/M
3300009170\|Ga0105096_10225997	Not Available	949	Open in IMG/M
3300009181\|Ga0114969_10628255	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	586	Open in IMG/M
3300009182\|Ga0114959_10003386	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	12527	Open in IMG/M
3300009184\|Ga0114976_10539019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	598	Open in IMG/M
3300010157\|Ga0114964_10466001	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	595	Open in IMG/M
3300010158\|Ga0114960_10531646	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	562	Open in IMG/M
3300017716\|Ga0181350_1143725	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	560	Open in IMG/M
3300017723\|Ga0181362_1099958	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	577	Open in IMG/M
3300017754\|Ga0181344_1015054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	2440	Open in IMG/M
3300017761\|Ga0181356_1240387	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	519	Open in IMG/M
3300017766\|Ga0181343_1010080	Not Available	3061	Open in IMG/M
3300017766\|Ga0181343_1048183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	1258	Open in IMG/M
3300017766\|Ga0181343_1190453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	564	Open in IMG/M
3300017785\|Ga0181355_1094219	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1243	Open in IMG/M
3300019784\|Ga0181359_1261647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	518	Open in IMG/M
3300020141\|Ga0211732_1515230	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	601	Open in IMG/M
3300020151\|Ga0211736_10405833	All Organisms → cellular organisms → Bacteria	2076	Open in IMG/M
3300020159\|Ga0211734_10730744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	500	Open in IMG/M
3300020160\|Ga0211733_10251935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	538	Open in IMG/M
3300020160\|Ga0211733_10369213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	572	Open in IMG/M
3300020162\|Ga0211735_10643680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	624	Open in IMG/M
3300020172\|Ga0211729_10395087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	507	Open in IMG/M
3300020524\|Ga0208858_1011414	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	1475	Open in IMG/M
3300021516\|Ga0194045_1106924	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	697	Open in IMG/M
3300021961\|Ga0222714_10110670	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1716	Open in IMG/M
3300021961\|Ga0222714_10250837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	993	Open in IMG/M
3300021962\|Ga0222713_10087900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	2255	Open in IMG/M
3300021962\|Ga0222713_10253392	All Organisms → Viruses → Predicted Viral	1145	Open in IMG/M
3300021962\|Ga0222713_10597220	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	644	Open in IMG/M
3300022179\|Ga0181353_1008619	All Organisms → Viruses → Predicted Viral	2521	Open in IMG/M
3300022190\|Ga0181354_1098541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	954	Open in IMG/M
3300022190\|Ga0181354_1195858	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	605	Open in IMG/M
3300024306\|Ga0255148_1028657	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1040	Open in IMG/M
3300024343\|Ga0244777_10800195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	557	Open in IMG/M
3300024348\|Ga0244776_10434806	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	862	Open in IMG/M
3300024351\|Ga0255141_1054532	Not Available	585	Open in IMG/M
3300024352\|Ga0255142_1018131	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1140	Open in IMG/M
3300024358\|Ga0255173_1047544	Not Available	727	Open in IMG/M
3300024495\|Ga0255164_1015440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	1303	Open in IMG/M
3300024503\|Ga0255152_1020821	All Organisms → Viruses → Predicted Viral	1262	Open in IMG/M
3300024513\|Ga0255144_1037086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	829	Open in IMG/M
3300025818\|Ga0208542_1103584	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	815	Open in IMG/M
3300026573\|Ga0255269_1052591	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1131	Open in IMG/M
3300027221\|Ga0208557_1047367	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	743	Open in IMG/M
3300027223\|Ga0208169_1032786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	986	Open in IMG/M
3300027223\|Ga0208169_1076552	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	581	Open in IMG/M
3300027396\|Ga0255146_1081215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	670	Open in IMG/M
3300027467\|Ga0255154_1055265	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	889	Open in IMG/M
3300027754\|Ga0209596_1331692	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	594	Open in IMG/M
3300027764\|Ga0209134_10341997	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	505	Open in IMG/M
3300027770\|Ga0209086_10128224	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1257	Open in IMG/M
3300027808\|Ga0209354_10441988	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	501	Open in IMG/M
3300027899\|Ga0209668_10400509	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	898	Open in IMG/M
3300031951\|Ga0315904_10317852	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	1450	Open in IMG/M
3300031997\|Ga0315278_11514753	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	645	Open in IMG/M
3300031999\|Ga0315274_11673603	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	592	Open in IMG/M
3300032116\|Ga0315903_11132092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	534	Open in IMG/M
3300032173\|Ga0315268_12247639	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	559	Open in IMG/M
3300033493\|Ga0316631_10334182	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	614	Open in IMG/M
3300033978\|Ga0334977_0110073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	1464	Open in IMG/M
3300033994\|Ga0334996_0533960	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	517	Open in IMG/M
3300034060\|Ga0334983_0261001	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1050	Open in IMG/M
3300034066\|Ga0335019_0120132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	1750	Open in IMG/M
3300034066\|Ga0335019_0764757	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	548	Open in IMG/M
3300034073\|Ga0310130_0022153	Not Available	2017	Open in IMG/M
3300034096\|Ga0335025_0592859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	547	Open in IMG/M
3300034101\|Ga0335027_0369093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	942	Open in IMG/M
3300034102\|Ga0335029_0638365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	589	Open in IMG/M
3300034102\|Ga0335029_0753849	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	520	Open in IMG/M
3300034106\|Ga0335036_0388543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	900	Open in IMG/M
3300034107\|Ga0335037_0093690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	1629	Open in IMG/M
3300034110\|Ga0335055_0380319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	586	Open in IMG/M
3300034118\|Ga0335053_0186822	All Organisms → Viruses → Predicted Viral	1372	Open in IMG/M
3300034118\|Ga0335053_0409901	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	820	Open in IMG/M
3300034272\|Ga0335049_0811939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	552	Open in IMG/M
3300034355\|Ga0335039_0671272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	502	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	98.04%
Terrestrial	Environmental → Terrestrial	1.96%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	77.45%
Marine	Environmental → Aquatic → Marine	20.59%
Soil	Environmental → Terrestrial → Soil	0.98%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.98%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	46.08%
Lentic	Environmental → Aquatic → Freshwater → Lentic	16.67%
River	Environmental → Aquatic → Freshwater → River	9.80%
Coastal	Environmental → Aquatic → Marine → Coastal	8.82%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	6.86%
Unclassified	Environmental → Aquatic → Marine → Unclassified	4.90%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.94%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	1.96%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.98%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	43.14%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	13.73%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	9.80%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	8.82%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	6.86%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	4.90%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.94%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	2.94%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	1.96%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	1.96%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	0.98%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.98%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	15.69%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	14.71%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	13.73%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	9.80%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	8.82%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	6.86%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	6.86%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	4.90%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	2.94%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	2.94%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.96%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	1.96%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	1.96%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	1.96%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	0.98%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	0.98%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	0.98%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.98%
Fracking Water	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Fracking Water	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003860	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL	Environmental	Open in IMG/M
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300006641	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNA	Environmental	Open in IMG/M
3300006803	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_DNA	Environmental	Open in IMG/M
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental	Open in IMG/M
3300006875	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_>0.8_DNA	Environmental	Open in IMG/M
3300006920	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12	Environmental	Open in IMG/M
3300007234	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNA	Environmental	Open in IMG/M
3300007540	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG	Environmental	Open in IMG/M
3300007555	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.555	Environmental	Open in IMG/M
3300007636	Estuarine microbial communities from the Columbia River estuary - metaG 1371A-3	Environmental	Open in IMG/M
3300008259	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0132-C-NA	Environmental	Open in IMG/M
3300008263	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-53-LTR	Environmental	Open in IMG/M
3300008266	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NA	Environmental	Open in IMG/M
3300008450	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - Oct 27, 2014 all contigs	Environmental	Open in IMG/M
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009151	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG	Environmental	Open in IMG/M
3300009152	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG	Environmental	Open in IMG/M
3300009158	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG	Environmental	Open in IMG/M
3300009160	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaG	Environmental	Open in IMG/M
3300009164	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG	Environmental	Open in IMG/M
3300009170	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm May2015	Environmental	Open in IMG/M
3300009181	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG	Environmental	Open in IMG/M
3300009182	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG	Environmental	Open in IMG/M
3300009184	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG	Environmental	Open in IMG/M
3300010157	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaG	Environmental	Open in IMG/M
3300010158	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_MF_MetaG	Environmental	Open in IMG/M
3300017716	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.DCM.D	Environmental	Open in IMG/M
3300017723	Freshwater viral communities from Lake Michigan, USA - Su13.ND.MM110.S.N	Environmental	Open in IMG/M
3300017754	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.D.D	Environmental	Open in IMG/M
3300017761	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.N	Environmental	Open in IMG/M
3300017766	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.D	Environmental	Open in IMG/M
3300017785	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.N	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300020141	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_104 megahit1	Environmental	Open in IMG/M
3300020151	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1	Environmental	Open in IMG/M
3300020159	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_108 megahit1	Environmental	Open in IMG/M
3300020160	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_105 megahit1	Environmental	Open in IMG/M
3300020162	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_201 megahit1	Environmental	Open in IMG/M
3300020172	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1	Environmental	Open in IMG/M
3300020524	Freshwater microbial communities from Lake Mendota, WI - 16NOV2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021516	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L626-11m	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300022179	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.N	Environmental	Open in IMG/M
3300022190	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.N	Environmental	Open in IMG/M
3300024306	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Miss_RepB_8h	Environmental	Open in IMG/M
3300024343	Combined assembly of estuarine microbial communities from Columbia River, Washington, USA >3um size fraction	Environmental	Open in IMG/M
3300024348	0.2um to 3um size fraction coassembly	Environmental	Open in IMG/M
3300024351	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepA_0h	Environmental	Open in IMG/M
3300024352	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepB_0h	Environmental	Open in IMG/M
3300024358	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atl_RepA_8d	Environmental	Open in IMG/M
3300024495	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepA_8d	Environmental	Open in IMG/M
3300024503	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Yuk_RepC_8h	Environmental	Open in IMG/M
3300024513	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepA_8h	Environmental	Open in IMG/M
3300025818	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300026573	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Yuk_RepC_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300027221	Estuarine microbial communities from the Columbia River estuary - metaG 1548A-3 (SPAdes)	Environmental	Open in IMG/M
3300027223	Estuarine microbial communities from the Columbia River estuary - metaG 1548B-3 (SPAdes)	Environmental	Open in IMG/M
3300027396	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepC_8h	Environmental	Open in IMG/M
3300027467	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atl_RepB_8h	Environmental	Open in IMG/M
3300027754	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027764	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MLB.SN (SPAdes)	Environmental	Open in IMG/M
3300027770	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027808	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD (SPAdes)	Environmental	Open in IMG/M
3300027899	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)	Environmental	Open in IMG/M
3300031951	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300031999	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20	Environmental	Open in IMG/M
3300032116	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119	Environmental	Open in IMG/M
3300032173	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_top	Environmental	Open in IMG/M
3300033493	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D3_A	Environmental	Open in IMG/M
3300033978	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME28Sep2014-rr0002	Environmental	Open in IMG/M
3300033994	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME25Jul2006D11-rr0046	Environmental	Open in IMG/M
3300034060	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16May2013-rr0016	Environmental	Open in IMG/M
3300034066	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Jul2017-rr0087	Environmental	Open in IMG/M
3300034073	Fracking water microbial communities from deep shales in Oklahoma, United States - MC-6-XL	Environmental	Open in IMG/M
3300034096	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME15Oct2015-rr0098	Environmental	Open in IMG/M
3300034101	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19Sep2005-rr0107	Environmental	Open in IMG/M
3300034102	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2002-rr0112	Environmental	Open in IMG/M
3300034106	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131	Environmental	Open in IMG/M
3300034107	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Apr2017-rr0133	Environmental	Open in IMG/M
3300034110	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME01Jun2009D10-rr0171	Environmental	Open in IMG/M
3300034118	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Aug2017-rr0165	Environmental	Open in IMG/M
3300034272	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jul2017-rr0156	Environmental	Open in IMG/M
3300034355	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Oct2015-rr0135	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0031658_10544041	3300003860	Freshwater Lake Sediment	MSNFKHLDGMVALLSEIYEINERIMTGXXCSAKTAIASGKMKKLLHHYHEALHEDG
Ga0069718_159010071	3300004481	Sediment	MSAFKHLDGMVALLSEIYEINERVMCGDICSAKAAIASTRMKKLLNHYHEALHEDGASKVSLQAYVAA
Ga0075471_101846784	3300006641	Aqueous	MSAFKHLDGMVALLSEVYEINERVMCGDLCSAKTAIASTKMKKLLHHYHEALHEDGASKVSLQAYVAAG
Ga0075467_105341302	3300006803	Aqueous	MSNFKHLDGMVARLSEVYEINERIMTGDICSAKAAIASTNVKKILSHYHEALHEDGAVKVSLQAYVAAGGWVGI
Ga0075464_100656761	3300006805	Aqueous	MSNFKHLDGMVALLSEVYEINERIMTGDICSSKTALASDKMKKLLHHYHEA
Ga0075464_108824822	3300006805	Aqueous	MTDFRHLDAMRHLIEELFFVNERIMTGDIVSAKAAIASTNVKKILNHYHEALSEEGATMISLQAYVAAGGW
Ga0075473_102894701	3300006875	Aqueous	MSAFKHLDGMVALLSEVYEINERVMCGDLCSAKTAIASTKMKKLLHHYHEALHEDGASKVSLQAYV
Ga0070748_13433411	3300006920	Aqueous	MRNLLAEIYEVNERIMTGDICSAKAAIASTNVKKILNHYHEALHEDGATKVSLQAYIAAGGWV
Ga0075460_101528682	3300007234	Aqueous	MSSFRHLDGMVALLSELYEINERIMTGDICSAKTAIHSDRMKKLLNHYHEALSEDGA
Ga0099847_12061502	3300007540	Aqueous	MSSFRHLDGMVALLSELYEINERIMTRDICSAKTAIHSDRMKKLLNHYHEALSEDGATK
Ga0102817_10282475	3300007555	Estuarine	MSNFKHLDGMVALLSEVYEINERIMTGDICSAKTAIASGRMKKLLHHYHEALHED
Ga0102856_10359881	3300007636	Estuarine	MSNFQHLEGMRNLLAEIYEVNERIMTGDIVSPKAAIASTNVKKILNHYHEALHEDGAVKVSLQAYV
Ga0114841_12654741	3300008259	Freshwater, Plankton	MSAFQHLDGMVALLSELYEINCRVECGDIVSAKAAIKSKRMEKLLNHYHEALSED
Ga0114349_101208112	3300008263	Freshwater, Plankton	MSAFQHLDGMVALLSELYEINCRVECGDIVSAKAAIKSKRMEKLLNHYH
Ga0114363_11231054	3300008266	Freshwater, Plankton	MSSFRHLDGMTALLSEVYEINERIMCGDICSAKSAIASTRMKKLLNHYHEAL
Ga0114880_10615693	3300008450	Freshwater Lake	MSAFKHLDGMVALLSEVYEINERIMCGDICSAKAAIASTKMKKLLHHYHEALHEDGATKVSLQAYVAA
Ga0114880_11302034	3300008450	Freshwater Lake	MSSFRHLDGMTALLSEIYEINERVMSGDICSAKAAIASTKMKKLLHHYHEALHEDGATKVSLQAYVAA
Ga0114973_103576013	3300009068	Freshwater Lake	MSSFKHLEGMRNLILEIYEVNERIMTGDIVSAKAAIASTNVKKILNHYHEALHEDGAVKVSLQAYVAAGG
Ga0105098_102900503	3300009081	Freshwater Sediment	MSAFQHLDGMTALLSELYEVNERVLTGDIISAKAAIKSSRMPKLIRHYHEALSEDGAEA
Ga0114962_103471611	3300009151	Freshwater Lake	MSNFQHLEGMRNLLLEIYEVNERIMTGDIVSAKAAIASTNVKKILNHYHEALHEDGAVKVSLQ
Ga0114962_103807981	3300009151	Freshwater Lake	MLALLSELYEINERVMCGDIVSAKAAIASTRMKKCLNHYHEAISEDGGTKVWLRVYVAAGGW
Ga0114962_104038243	3300009151	Freshwater Lake	MSEFKHTDGMLSLLSELYEINERIRTGDICSPKTAIASDRMKKLLNHYAEAISEDGASNIHLQAYVAAGG
Ga0114980_104817911	3300009152	Freshwater Lake	MSSFAHLEGMRNLILEIYEVNERIMTGDICSAKSAIASTNVKKILNHYHEALHEDGAVKVSLQA
Ga0114977_104974431	3300009158	Freshwater Lake	MTDFRHLEGMRNLLAEIYEVNERIMTGDICSAKSAIASTNVKKILNHYHEALHEDGAVK
Ga0114981_103814493	3300009160	Freshwater Lake	MSSFAHLEGMRNLILEIYEVNERIMTGDICSAKSAIASTNVKKILNHYHEALHEDGAVKVSLQAYVAAGGWVGIQ
Ga0114975_107197011	3300009164	Freshwater Lake	MSNFKHLDGMVALLYDIYEINERIMTGDICSAKAALASGNMKKLLAHYHEALHEDGAVKVSLQAY
Ga0105096_102259974	3300009170	Freshwater Sediment	MSAFQHLDGMTALLSELYEINERVLTGDIISAKAAIKSSKMPKLIRHYH
Ga0114969_106282551	3300009181	Freshwater Lake	MSSFAHLEGMRNLILEIYAVNERIMTGDICSAKAAIASTNVKKILNHYHEALHEDGA
Ga0114959_1000338622	3300009182	Freshwater Lake	MSEFKHSDGMLALLSELYEINERILTGDICSPKTAIASDRMKKLLNHYAEAISEDG
Ga0114976_105390193	3300009184	Freshwater Lake	MSNFKHLDGMVALLYDIYEINERIMTGDICSAKAALASGNMKKLLAHYHEALHEDGAVKVSLQAYVAAGGWVGIQ
Ga0114964_104660011	3300010157	Freshwater Lake	MSNFAHLEGMRNLLAEIYEVNERIMTGDICSAKAAIASTNVKKILTHYHEALHEDGAVKVSLQAYVAAGGWV
Ga0114960_105316463	3300010158	Freshwater Lake	MSEFKHTDGMLSLLSELYEINERIRTGDICSPKTAIASDRMKKLLNHYAEAISEDGASNIHLQAY
Ga0181350_11437252	3300017716	Freshwater Lake	MSSFEHLEGMRNLLAEIYEVNERIMTGDILGPKSAIASANMKKILAHYHEALHEDGATKVSLQAY
Ga0181362_10999581	3300017723	Freshwater Lake	MSSFKHLDGMVALLYDIYEINERIMTGDICSAKAALASGNMKKLLLHYHEALHED
Ga0181344_10150541	3300017754	Freshwater Lake	MSSFRHLDGMVALLSEIYEINERIMTGDICSAKAAIASTRMKKLLNHYHEALSEDGATKISLQAY
Ga0181356_12403872	3300017761	Freshwater Lake	MSSFEHLEGMRNLLAEIYEVNERILTGDILGPKSAIASANMKKILAHYHEALHEDGAVKVSLQAY
Ga0181343_101008010	3300017766	Freshwater Lake	MSSFRHLDGMVALLSEIYEINERIMTGDICSAKAAIASTRMKKLLNHYHEALSEDGATKISLQAYAAAGGWV
Ga0181343_10481835	3300017766	Freshwater Lake	MSSFRHLDGMVALLSEIYEINERILTLDIVSAKAAIASTRMKKLLNHYHEALSEDGATKISLQAYAAAGGWV
Ga0181343_11904533	3300017766	Freshwater Lake	MSSFRHLDGMVALLSEVYEINERIMTGDICSNKTAIASGRMKKLLHHYHEALHEDGAVKVSLQAYAAAGGW
Ga0181355_10942193	3300017785	Freshwater Lake	MSSFRHLDGMVALLSEIYEINERIMTGDICSAKSAIASDRMKKLLHHYHEALHEDGAVK
Ga0181359_12616471	3300019784	Freshwater Lake	MIALLYDIYEINERIMTGDICSAKAALASGNMKKLLLHYHEALHEDGAVKVSLQAYIAAG
Ga0211732_15152301	3300020141	Freshwater	MRHLLEELFFVNERIMTGDIISAKAAIASTNLKKILNHYHEALSEEGATMISLQVYIAAGGWIG
Ga0211736_104058331	3300020151	Freshwater	MSAFKHLDGMVALLSEVYEINERVMCGDICSAKTAIASTRMKKLLNHYHEALHE
Ga0211734_107307441	3300020159	Freshwater	MSSFKHLDGMVALLSEVYEINCRVECGDIASAKAAIASTRMKKLLNHYHEALHEDGASKVSLQAYVAAGGWVGIA
Ga0211733_102519351	3300020160	Freshwater	MSAFKHLDGMVALLSEVYEINERVMCGDICSAKTAIASTRMKKLLNHYHEALHEDGASK
Ga0211733_103692132	3300020160	Freshwater	MSSFKHLDGMVALLSEVYEINERVMCGDICSAKTAIASTRMKKLLNHYHEALHEDGASKVSLQAYVAAGGWVGI
Ga0211735_106436801	3300020162	Freshwater	MSSFKHLDGMVALLSEVYEINCRVECGDIASAKAAIASTRMKKLLNHYHEALHEDGASKV
Ga0211729_103950872	3300020172	Freshwater	VSSFKHLDALVALLSEIYEINERILTLDICSAKTAIASTRMKKLLHHYHEALHEDGAVKVSLQAYVAAGGWVGI
Ga0208858_10114141	3300020524	Freshwater	MSSFRHLDGMVALLSEIYEINERILTGDICSNKTAIASGRMKKLLHHYHEA
Ga0194045_11069241	3300021516	Anoxic Zone Freshwater	MSEFKHTDGMLSLLSELYEINERILTGDICSPKTAIASDRMKKLLNHYAEAISED
Ga0222714_101106701	3300021961	Estuarine Water	MSSFRHLDGMVALLSEIYEINERILTGDICSNKTAIASHRMNKLLNHYHEALHEDGASKV
Ga0222714_102508373	3300021961	Estuarine Water	MSGSFQHLDGMAALLSELYEINERIMCGDIVSAKAAIASTRMTKLLRHYHEALSEDGAVSISLD
Ga0222713_100879006	3300021962	Estuarine Water	MAAFQHLDGMMALMSELYEINERILTGDIVSSKAAIKSPRMKKLLDH
Ga0222713_102533921	3300021962	Estuarine Water	MSSFRHLDGMVALLSEIYEINERILTGDICSNKTAIASHRMNKLLNHYHEALHEDGA
Ga0222713_105972203	3300021962	Estuarine Water	MTALMSELYEINERILTGDIISAKAAIKSPRMKKLLDHYHEALSEDGASAIYLDTYD
Ga0181353_10086191	3300022179	Freshwater Lake	MPNLMSSFRHLDGMTALLSEVYEINERIMCGDICSAKSAIASTRMKKLLNHYHEALHES
Ga0181354_10985414	3300022190	Freshwater Lake	VSAFQHLDGLVALLSEIYEINERILTLDICSAKTAIASTRMKKLLNHYHEALHEDGAVKVSLQAYVAAGGWVGITY
Ga0181354_11958581	3300022190	Freshwater Lake	MSSFEHLEGMRNLLIEIYEVNERILTGDIISAKAAIASTNVKKILNHYHEALHEDGAVKV
Ga0255148_10286571	3300024306	Freshwater	VSAFQHLDGMTALLSELYEINERILTGDIISAKAAIKSPRMKKLLDHYHEALSEDGVSDIYLDTYEAAGSWV
Ga0244777_108001952	3300024343	Estuarine	VSAFKHLDGMVALLSEVYEINERILTGDICSNKTAIASGRMKKLLHHYHEALHEDGAT
Ga0244776_104348061	3300024348	Estuarine	MSAFRHLDGMVALLSEIYEINERILTGDICSNKTAIASGRMKKLLHHYNEALHEDGAVKV
Ga0255141_10545322	3300024351	Freshwater	MAAFQHLDGMTALMSELYEINERILTGDIISAKAAIKSPRMKK
Ga0255142_10181315	3300024352	Freshwater	VSAFQHLDGMTALLSELYEINERILTGDIISAKAAIKSPRMKKLLD
Ga0255173_10475441	3300024358	Freshwater	MAAFQHLDGMTALMSELYEINERILTGDIISAKAAIKSPRMK
Ga0255164_10154405	3300024495	Freshwater	MTALMSELYEINERILTGDIISAKAAIKSPRMKKLLDHYHEALSEDGAVEIY
Ga0255152_10208211	3300024503	Freshwater	MAAFQHLDGMTALMSELYEINERILTGDIISAKAAIKSPRMKKL
Ga0255144_10370864	3300024513	Freshwater	VSAFQHLDGMTALLSELYEINERILTGDIISAKAAIKSPRMKKLLDHYHEALSED
Ga0208542_11035842	3300025818	Aqueous	MSSFRHLDGMVALLSELYEINERIMTGDICSAKTAIHSDRMKKLLNHYHEALSEDGASK
Ga0255269_10525914	3300026573	Freshwater	MAAFQHLDGMTALMSELYEINERILTGDIISAKAAIKSPRMKKLLDHYHEALSEDGA
Ga0208557_10473671	3300027221	Estuarine	MSNFAHLEGMRNLILEIYEVNERIMTGDIISAKAAIASTNVKKILNHYHEALHEDGATNVSLQAYVAAGGWV
Ga0208169_10327861	3300027223	Estuarine	MSAFRHLDGMVALLSEIYEINERILTGDICSNKTAIASGRMKKLLHHYHEALHEDGAVKV
Ga0208169_10765521	3300027223	Estuarine	MSAFKHLDGMVALLSEVYEINERIMTGDICSNKTAIASTRMKKLLHHYHEALHEDGAVKVSLQAYCAAGG
Ga0255146_10812153	3300027396	Freshwater	VSAFQHLDGMTALMSELYEINERILTGDIISAKAAIKSPRMKKLLDHYHEALSED
Ga0255154_10552651	3300027467	Freshwater	MSAFQHLDGMTALMSELYEINERILTGDIISAKAAIKSPRMKKLLD
Ga0209596_13316923	3300027754	Freshwater Lake	MSNFQHLEGMRNLLAEIYEVNERIMTGDICSAKAAIASTNVKKILTHYHEALHEDGAVKVSLQAY
Ga0209134_103419971	3300027764	Freshwater Lake	MTDFRHLEGMRNLLIEIYEVNERIMTGDICSAKSAIASTNVKKILAHYHEALHEDGAVKVSLQAYVAAGGWVG
Ga0209086_101282245	3300027770	Freshwater Lake	MSNFKHLDGMRNLLAEIYEVNERIMTGDIISAKAAIASTNVKKILNHYHEALHEDGAVKVSLQAYVAAGGWV
Ga0209354_104419881	3300027808	Freshwater Lake	MSNFKHLDGMVALLYDIFEINERIMTGDICSAKAALASGNMKKLLLHYHEALHEDGAVKVSLQAYVAAGGWV
Ga0209668_104005091	3300027899	Freshwater Lake Sediment	MSNFKHLDGMVALLYDIYEINERIMTGDICSAKAALASGNMKKLLAHYHE
Ga0315904_103178525	3300031951	Freshwater	MSTFKHLDGMVALLSEVYEINERIMCGDICSAKAAIASTKMKKLLHHYHEALHEDGATKVSLQAYVAAG
Ga0315278_115147533	3300031997	Sediment	MSSFQHLEGMRNLILEIYEVNERIMTGDICSAKAAIASTNVKKILAHYHEALHEDGAVKV
Ga0315274_116736031	3300031999	Sediment	MSSFQHLEGMRNLILEIYEVNERIMTGDICSAKAAIASTNVKKILAHYHEALHEDGAVKVSLQAY
Ga0315903_111320923	3300032116	Freshwater	MTSFKHLDGMTALLSEVYEINERVMSGDICSAKAAIASTKMKKLLHHYHEALHEDG
Ga0315268_122476391	3300032173	Sediment	MSSFQHLEGMRNLIQEIYFINERIMTGDICSAKAAIASTNVKKILNHYHEALHEDGATKVSLQAYVAAGGWV
Ga0316631_103341823	3300033493	Soil	MSGSFQHLDGMLALMSELYEINERIMCGDIVSAKAAIKSTRMDKLLRHYHEALSEDGASAISLDVF
Ga0334977_0110073_2_184	3300033978	Freshwater	MSTFKHLDGMVALLSEVYEINERIMTGDICSSKTAIASTRMKKLLHHYHEALHEDGAVKV
Ga0334996_0533960_3_227	3300033994	Freshwater	MSSFRHLDGMVALLSEVYEINERILTGDITSNKTAIASGRMKKLLHHYHEALHEDGAVKVSLQAYAAAGGWVGIT
Ga0334983_0261001_859_1050	3300034060	Freshwater	MTDFRHLDGMRNLILEIYEVNERIMTGDICSAKSAIASTNVKKILNHYHEALHEDGAVKVSLQA
Ga0335019_0120132_3_164	3300034066	Freshwater	MSSFRHLDGMVALLSEVYEINERILTGDITSNKTAIASGRMKKLLHHYHEALHE
Ga0335019_0764757_373_546	3300034066	Freshwater	MSSFRHLDGMVALLSEVYEINERIMTGDICSAKSAIASSRMKKLLHHYHEALHEDGAV
Ga0310130_0022153_1835_2017	3300034073	Fracking Water	MTALLSELYEINERIMCGDIVSAKAAIKSDRMKKLLNHYHEALSEDGATKISLQAYAAIT
Ga0335025_0592859_3_182	3300034096	Freshwater	MSSFRHLDGMVALLSEVYEINERIMTGDICSAKTAIQSDRMKKLLHHYHEALHEDGAVKV
Ga0335027_0369093_754_942	3300034101	Freshwater	MSTFKHLDGMVALLSEVYEINERIMTGDICSAKTAIASTRMKKLLHHYHEALHEDGAVKVSLQ
Ga0335029_0638365_395_589	3300034102	Freshwater	MSSFRHLDGMVALLSEVYEINERILTGDICSNKTAIQSDRMKKLLNHYHEALSEDGAAKISLQAY
Ga0335029_0753849_3_170	3300034102	Freshwater	MSTFKHLDGMVALLSEVFEINERILTGDICSSKTAIASTRMKKLLHHYHEALHEDG
Ga0335036_0388543_731_898	3300034106	Freshwater	MSGSFQHLDGMTALLSELYEINERILTGDICSAKSAIASTRMKKLLHHYHEALHED
Ga0335037_0093690_1_204	3300034107	Freshwater	MSNFRHLDGMVALLSEIYEINERIMTGDICSNKTAIASGRMKKLLHHYHEALHEDGAVKVSLQAYAAA
Ga0335055_0380319_1_189	3300034110	Freshwater	MVGLLSEIFEINERILTGDICSNKSAIASTRMKKLLHHYHEALHEDGAVKVSLQAYAAAGGWV
Ga0335053_0186822_1202_1372	3300034118	Freshwater	MSSFRHLDGMVALLSEVYEINERIMTGDICSAKTAIQSERMKKMLNHYHEALHEDGA
Ga0335053_0409901_1_198	3300034118	Freshwater	MSSFRHLDGMVALLSEVYEINERILTGDICSNKTAIQSDRMKKLLNHYHEALSEDGAAKISLQAYA
Ga0335049_0811939_1_225	3300034272	Freshwater	MSSFRHLDGMVALLSEIYEINERIMTGDICSNKTAIASGRMKKLLHHYHEALHEDGAVKVSLQAYAAAGGWVGIQ
Ga0335039_0671272_294_500	3300034355	Freshwater	MSSFRHLDGMVALLSEVYEINERIMTGDICSAKSAIASTRMKKLLHHYHEALHEDGAVKVSLQAYCAAG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F101023

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences