Basic Information | |
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Family ID | F100985 |
Family Type | Metagenome |
Number of Sequences | 102 |
Average Sequence Length | 44 residues |
Representative Sequence | MEALYAGLTAWGIELTVAGLAFYLLYREEQKVYKRRATKKEKV |
Number of Associated Samples | 64 |
Number of Associated Scaffolds | 102 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 88.24 % |
% of genes near scaffold ends (potentially truncated) | 14.71 % |
% of genes from short scaffolds (< 2000 bps) | 64.71 % |
Associated GOLD sequencing projects | 57 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.56 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (49.020 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine (36.274 % of family members) |
Environment Ontology (ENVO) | Unclassified (74.510 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (78.431 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56 |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Transmembrane (alpha-helical) | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 57.75% β-sheet: 0.00% Coil/Unstructured: 42.25% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.56 |
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Visualization |
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All Organisms Unclassified |
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Visualization |
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Marine Deep Ocean Seawater Seawater Microbial Mat Marine Aqueous Marine Surface Water Marine Seawater Marine Seawater Marine Marine Sediment Seawater Marine Harbor Deep Subsurface Volcanic Co2 Seep Seawater |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
DelMOSum2011_100132962 | 3300000115 | Marine | MQAFYAGLTAWGIELVVAGLAFYLLYREEQKVYKRRASKKEEV* |
KVRMV2_1001271141 | 3300002231 | Marine Sediment | MQALYAGLTAWGIELAVAGLAFYLLYREEQKVYKRRATKKEKVQS* |
JGI25132J35274_10932692 | 3300002483 | Marine | MKAMYAGILAWAIELSVAGLAFYLLYREEQKVYKKRASKKEIHTE* |
JGI25132J35274_10959712 | 3300002483 | Marine | MKAMYAGILAWAIELSVAGLAFYLLYREEQKVYKRRASKKEIHTE* |
Ga0063241_10160888 | 3300003894 | Marine | MEALYAGLSAWAIEIGIAILAFYLLYREEQKVYKRRAAKKEKV* |
Ga0066830_1000432511 | 3300005433 | Marine | MQALYAGLAAWGIELAVAGLAFYLLYREEQKVYKRRATKKEK |
Ga0078893_113147613 | 3300005837 | Marine Surface Water | MQALYAGLAAWGIELAVAGLAFYLLYREEQKVYKRRATKKEKVQS* |
Ga0098038_10513847 | 3300006735 | Marine | MQAFYAGLTAWGIELVVAGLAFYLLYREEQKVYKRRASK |
Ga0098040_11835403 | 3300006751 | Marine | MEAFYAGLTAWTIELTIAGIILYILHREEQKVYKRRQGDMDNE* |
Ga0098044_100012014 | 3300006754 | Marine | MEAFYAGLTAWTIELTIAGIILYILHREEQKVYKRRASKKEEV* |
Ga0098044_13367403 | 3300006754 | Marine | MEALYAGLTAWTIELTIAGIILYILHREEQKVYKRRQGDMDNE* |
Ga0098054_10541717 | 3300006789 | Marine | MEAFYAGLTAWTIELTIAGIILYILHREEQKVYKRRVSKKEEV* |
Ga0098054_11838983 | 3300006789 | Marine | MEALYAGLSAWAIELGIAALAFYLLHREEQKVYKRRASKKEEV* |
Ga0098054_12558723 | 3300006789 | Marine | MNALWAGLTAWAIELTVAGIMMFVLKREEQKVYKRRKNK* |
Ga0098055_12407244 | 3300006793 | Marine | DGEAMNALWAGLTAWAIELTVAGIMMFVLKREEQKVYKRRKNK* |
Ga0098036_100391513 | 3300006929 | Marine | MEPLYAGLLAWLIELSVAGVAFYLLRREENKVYRRREDDKTRKS* |
Ga0098036_10096628 | 3300006929 | Marine | MEALYAGLAAWGIELTVAGIAFYLLYREEQKVYRRREDDKTR* |
Ga0098036_10178333 | 3300006929 | Marine | MEALYAGLSAWAIELSIAALAFYLLYREEQKVYKRRAAKKEEVQ* |
Ga0101666_10151282 | 3300007113 | Volcanic Co2 Seep Seawater | MQALYAGLLAWGIEITVAGLAFYLLYREEQKVYRRRKDGKTRQD* |
Ga0070747_10686492 | 3300007276 | Aqueous | MEAFYAGLTAWAIELSVAGIAFYLLYREEQKVYKRRGSKKEKIHSE* |
Ga0110931_10725012 | 3300007963 | Marine | MQALYAGLTAWTIELAVAGLAFYLLYKEEQKVYKKRATKKEKISTNED* |
Ga0098052_13082952 | 3300008050 | Marine | MEAFYAGLTAWTIELTIAGIILYTLHREEQKVYKRRQGDMDNE* |
Ga0115652_10055164 | 3300008624 | Marine | MEAFYAGLTAWTIELTIAGIILYILYREEQKVYKRRASKKEEV* |
Ga0114993_105062172 | 3300009409 | Marine | MEAFYAGTTAWTIELAIAGIILYMLYREEQKVYKRRKKEIKND* |
Ga0114932_1000109650 | 3300009481 | Deep Subsurface | MEALYAGLTAWGIELTVAGLAFYLLYREEQKVYKRRATKKEKV* |
Ga0114932_100079889 | 3300009481 | Deep Subsurface | MEALYAGLSAWGIELSIAALAFYLLYREEQKVYKRRAAKKEEV* |
Ga0114932_100086774 | 3300009481 | Deep Subsurface | MEALYAGLAAWGIELTVAGIAFYLLYREEQKVYKRRAAKKEEV* |
Ga0114932_1001091612 | 3300009481 | Deep Subsurface | MEAFYAGLTAWAIELSVAGLAFYLLYKEEQKVYKKRASKKEIHTE* |
Ga0114932_105568933 | 3300009481 | Deep Subsurface | MQAFYAGLTAWGIELVVAGLAFYLLYREEQKVNNRRASKKEED* |
Ga0114932_107894073 | 3300009481 | Deep Subsurface | AGLTAWGIELAIAGLLLYVLYREEQKVYRRRRNKDE* |
Ga0114932_107897922 | 3300009481 | Deep Subsurface | MNAIYAGILAWFIELSVAGAMFLILKREESKVYKRRDAKKKEKH* |
Ga0115011_104725532 | 3300009593 | Marine | MEALYAGLTAWGIELTVAGIAFYLLYREEQKVYKRRAAKKKEVQ* |
Ga0114906_11744612 | 3300009605 | Deep Ocean | MEALYAGLTAWGIELTVAGIAFYLLYREEQKVYRRRRDDKTK* |
Ga0114933_100525474 | 3300009703 | Deep Subsurface | MDALYAGLTAWAIEISVALFAFYLLYREEQKVYKRRNTKTSKVKQDG* |
Ga0098049_12227832 | 3300010149 | Marine | MEAFYAGLTAWAIELSVAGIAFYLLYREEQKVYKRRGSKKEKIHTE* |
Ga0098056_12061633 | 3300010150 | Marine | MEALLAGLTAGGIELTVAGLAFYLLYREEQKVFRRRENAKEEK* |
Ga0098059_10852683 | 3300010153 | Marine | MQALYAGLTAWTIELSVAALAFYLLYKEEQKVYKKRATKEEKVSSNED* |
Ga0163180_104845523 | 3300012952 | Seawater | MEAMYAGILAWAIELSVAGLAFYLLYREEQKVYKRRATKKEKV* |
Ga0163179_100593174 | 3300012953 | Seawater | MEALYAGLTAWGIEITVAAIAFYLLYREEQKVYRRRKNGKTK* |
Ga0163179_101109837 | 3300012953 | Seawater | MEPLYAGLLAWLIELGVAGAAFYLLRREENKVYRRREDDKTRKS* |
Ga0181383_11121681 | 3300017720 | Seawater | MEAFYAGLTAWAIELSVAGIAFYLLYREEQKVYKRRGSKKE |
Ga0211601_11263072 | 3300020351 | Marine | MQALYAGLLAWGIEIAVAGLAFYLLYREEQKVYRRRKDGKTRQD |
Ga0211498_101662263 | 3300020380 | Marine | MQALYAGLAAWGIELAVAGLAFYLLYREEQKVYKRRATKKEEVCSEENR |
Ga0211590_101925582 | 3300020387 | Marine | MQALYAGLAAWVIELGVAGLAFYLLYREEQKVYKRRAAKKEKI |
Ga0211590_102620803 | 3300020387 | Marine | AIYAGLSAWAIEISIAALAFYLLYREEQKVYKRRAAKKEEVQ |
Ga0211532_100209237 | 3300020403 | Marine | MQALYAGLLAWGIEIAVASLAFYLLYREEQKVYRRRKNGKTRQD |
Ga0211699_1000077836 | 3300020410 | Marine | MQALYAGLAAWVIELGVAGLAFYLLYREEQKVYKRRATKKEKV |
Ga0211699_100034827 | 3300020410 | Marine | MEPLYAGLLAWLIELGVAGAAFYLLRREENKVYRRREDDKTKQS |
Ga0211699_1000424911 | 3300020410 | Marine | MQALYAGLAAWGIELAVAGLAFYLLYREEQKVYKRRASKKEEIHTE |
Ga0211699_100368614 | 3300020410 | Marine | MEALYAGLSAWAIELSIAALAFYLLYREEQKVYKRRAAKKEEVQ |
Ga0211699_101119373 | 3300020410 | Marine | MEAIYAGLSAWAIEISIAALAFYLLYREEQKVYKRRAAKKEKV |
Ga0211699_103452362 | 3300020410 | Marine | MEALYAGLTAWGIELTVAGIAFYLLYREEQKVYRRRKDGKR |
Ga0211587_100096627 | 3300020411 | Marine | MQALYAGLLAWGVELAVAGLAFYLLYREEQKVYRRRKNGKR |
Ga0211587_101251633 | 3300020411 | Marine | MEALYAGLSAWAIELAIAALAFYLLYREEQKVYKRRAAKKEKV |
Ga0211576_101450571 | 3300020438 | Marine | TAWGIELTVAGLAFYLLYREEQKVFRRRENAKEEK |
Ga0211558_1000170110 | 3300020439 | Marine | MQALYAGLLAWGIELAVAGFAFYLLYREEQKVYRRRKNGKREE |
Ga0211558_101887321 | 3300020439 | Marine | MQAFYAGLAAWGIELAVAGLAFYLLYREEQKVYKRRAAKKEE |
Ga0211558_102614412 | 3300020439 | Marine | MEALYAGLSAWAIEIGIAALAFYLLYREEQKVYKRRAAKKEEVQ |
Ga0211695_102704243 | 3300020441 | Marine | MNAIYAGILAWFIELSVAGTMFLILKREESKVYKRRDAKKKEKH |
Ga0211559_100710792 | 3300020442 | Marine | MQALYAGLAAWGIELAVAGLAFYLLYREEQKVYKRRASKKEEVHTK |
Ga0211473_102369073 | 3300020451 | Marine | MEALYAGLTAWAIELSVAGIAFYLLYKEEQKVYKKRASKKEIHTE |
Ga0211473_103690962 | 3300020451 | Marine | MQAIYAGLTAWVVEVTIVLTILYLVYREEQKVYKRRTISSLL |
Ga0211643_101302472 | 3300020457 | Marine | MDALFAGMSAWAIELTVAALAFYLLYREEQKVYKKRATNKEKISKTQD |
Ga0211486_102547731 | 3300020460 | Marine | MEALYAGLAAWGIEITVAGIAFYLLYREEQKVYRRRKDDQTKKG |
Ga0211694_104158402 | 3300020464 | Marine | YVDMEPLYAGLLAWLIELGVAGAAFYLLRREENKVYRRREDDKTKQS |
Ga0211543_100616651 | 3300020470 | Marine | MEALYAGLSAWVIEIGIAALAFYLLYREEQKVYKRRA |
Ga0211543_101248222 | 3300020470 | Marine | MQALYAGLAAWGIELAVAGLAFYLLYREEQKVYKRRATKKEEVCAEENR |
Ga0211543_101566141 | 3300020470 | Marine | MQALYAGLLAWVLELSVAGLAFYLLYREEQKVYRRRKNG |
Ga0211614_102790951 | 3300020471 | Marine | AGLSAWAIEIGIAALAFYLLYREEQKVYKRRAAKKEEVQ |
Ga0211625_100114873 | 3300020473 | Marine | MEALYAGLTAWAIEIGIAILAFYLLHREEQKVYKRRAAKKEKV |
Ga0211547_100591283 | 3300020474 | Marine | MEPLYAGLLAWLIELGVAGAAFYLLRREENKVYRRREDDKTRKS |
Ga0211503_102220402 | 3300020478 | Marine | MEALYAGLSAWAIEIGIAALAFYLLYREEQKVYKRRAAKKEKV |
Ga0209992_1000086755 | 3300024344 | Deep Subsurface | MEALYAGLTAWGIELTVAGLAFYLLYREEQKVYKRRATKKEKV |
Ga0209992_100050038 | 3300024344 | Deep Subsurface | MEALYAGLAAWGIELTVAGIAFYLLYREEQKVYRRREDDKTR |
Ga0209992_100064631 | 3300024344 | Deep Subsurface | SVERELHMEALYAGLAAWGIELTVAGIAFYLLYREEQKVYKRRAAKKEEV |
Ga0209992_100066949 | 3300024344 | Deep Subsurface | MEAFYAGLTAWAIELSVAGLAFYLLYKEEQKVYKKRASKKEIHTE |
Ga0209992_100077863 | 3300024344 | Deep Subsurface | MEALYAGLSAWGIELSIAALAFYLLYREEQKVYKRRAAKKEEV |
Ga0209992_1000839311 | 3300024344 | Deep Subsurface | MQALYAGLTAWGIELAVAGLAFYLLYREEQKVYKRRATKKEKVQS |
Ga0209992_101048903 | 3300024344 | Deep Subsurface | MEALMAGMLAWGIEITIALSMFYILHREEQKVFQRRKK |
Ga0208667_10710781 | 3300025070 | Marine | MQAFYAGLTAWGIELVVAGLAFYLLYREEQKVYKRRASKKE |
Ga0208298_11035951 | 3300025084 | Marine | MQAFYAGLTAWGIELVVAGLAFYLLYREEQKVYKRRASKKEEV |
Ga0208793_11211433 | 3300025108 | Marine | MEAFYAGLTAWTIELTIAGIILYILHREEQKVYKRRASKKEEV |
Ga0209349_10358832 | 3300025112 | Marine | MYALYAGLTAWTIELTIAGIILYILHREEQKVYKRRQGDMDNE |
Ga0208919_10189925 | 3300025128 | Marine | MQALYAGLTAWTIELAVAGLAFYLLYKEEQKVYKKRATKKEKISTNED |
Ga0209645_100320214 | 3300025151 | Marine | MQALYAGLTAWGIEITIAGIAFYLLYREEQKVYRRRKDDQTKKG |
Ga0209645_10079389 | 3300025151 | Marine | MKAMYAGILAWAIELSVAGLAFYLLYREEQKVYKRRASKKEIHTE |
Ga0208134_10315572 | 3300025652 | Aqueous | MEAFYAGLTAWAIELSVAGIAFYLLYREEQKVYKRRGSKKEKIHSE |
Ga0209089_106634661 | 3300027838 | Marine | MEAFYAGTTAWTIELAIAGIILYMLYREEQKVYKRRKKEIKND |
Ga0256382_11079543 | 3300028022 | Seawater | MEALYAGLTAWGIELTVAGIAFYLLYREEQKVYRRRRDDKTK |
Ga0135222_10007393 | 3300029301 | Marine Harbor | MQALYAGLAAWGIELAVAGLAFYLLYREEQKVYKRRAAKKEEIHTEENR |
Ga0183748_100514410 | 3300029319 | Marine | MQALYAGLAAWGIELAVAGLAFYLLYREEQKVYKRRGSKKEEIHTE |
Ga0183748_100756412 | 3300029319 | Marine | MQALYAGLAAWGIELAVAGLAFYLLYREEQKVYKRRAAKKEEICTEENR |
Ga0183748_10185865 | 3300029319 | Marine | MEALYAGLSAWAIEIGIAALAFYLLYREEQKVYKRRAAKKEKVQ |
Ga0183748_10621563 | 3300029319 | Marine | MQALYAGLLAWGIEIAVASLAFYLLYREEQKVYRRRKNDKTRQD |
Ga0183748_10861011 | 3300029319 | Marine | MQALYAGLAAWGIELAVAGLAFYLLYREEQKVYKRRATKKEKVQS |
Ga0183757_10512993 | 3300029787 | Marine | MEALYAGLTAWAIELSVAGVAFYLLNKEEQKVYKRRASKKEIHTE |
Ga0310343_102694323 | 3300031785 | Seawater | MQAFYAGLAAWGIELAVAGLAFYLLYREEQKVYKRRASKKEEVHTK |
Ga0315316_107953221 | 3300032011 | Seawater | MEALYAGLTAWAIELSVAGVAFYLLNKEEQKVYKKRASKKEVSTSED |
Ga0315316_112910111 | 3300032011 | Seawater | MEALYAGLTAWTIELTIAGIILYILHREEQKVYKRRQGDM |
Ga0315315_103756314 | 3300032073 | Seawater | MDALFAGMSAWAIELTVAALGFYLLYREEQKVYKRRATKKEKISNTQD |
Ga0315315_109107642 | 3300032073 | Seawater | MEALYAGLTAWGIELTIAGLMFYLLYREERKCIARRSKNDDR |
Ga0316203_10477484 | 3300032274 | Microbial Mat | MQALYAGLAAWTIELAVAGLAFYLLYREEQKVYKKRATKKEEVSTNED |
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