NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F100984

Metagenome Family F100984

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F100984
Family Type Metagenome
Number of Sequences 102
Average Sequence Length 47 residues
Representative Sequence MLGATTFSENAIADQGILFFGVSEQSGISSSANAAVGIMSGVATMD
Number of Associated Samples 74
Number of Associated Scaffolds 102

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 100.00 %
% of genes near scaffold ends (potentially truncated) 100.00 %
% of genes from short scaffolds (< 2000 bps) 94.12 %
Associated GOLD sequencing projects 60
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (38.235 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(36.274 % of family members)
Environment Ontology (ENVO) Unclassified
(95.098 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(98.039 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 13.04%    β-sheet: 13.04%    Coil/Unstructured: 73.91%
Feature Viewer
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 102 Family Scaffolds
PF02018CBM_4_9 1.96
PF16778Phage_tail_APC 0.98
PF13884Peptidase_S74 0.98



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms59.80 %
UnclassifiedrootN/A38.24 %
unclassified Hyphomonasno rankunclassified Hyphomonas1.96 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000101|DelMOSum2010_c10085610All Organisms → Viruses → Predicted Viral1373Open in IMG/M
3300000115|DelMOSum2011_c10064350All Organisms → Viruses → Predicted Viral1359Open in IMG/M
3300000116|DelMOSpr2010_c10027580All Organisms → Viruses → Predicted Viral2685Open in IMG/M
3300000116|DelMOSpr2010_c10028392All Organisms → Viruses → Predicted Viral2639Open in IMG/M
3300000116|DelMOSpr2010_c10217854All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae → unclassified Podoviridae → Puniceispirillum phage HMO-2011601Open in IMG/M
3300000117|DelMOWin2010_c10207915Not Available598Open in IMG/M
3300001460|JGI24003J15210_10097620All Organisms → Viruses → environmental samples → uncultured Mediterranean phage848Open in IMG/M
3300006029|Ga0075466_1026597All Organisms → Viruses → Predicted Viral1831Open in IMG/M
3300006029|Ga0075466_1113723All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae → unclassified Podoviridae → Puniceispirillum phage HMO-2011723Open in IMG/M
3300006735|Ga0098038_1057380All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae1396Open in IMG/M
3300006735|Ga0098038_1167566Not Available724Open in IMG/M
3300006737|Ga0098037_1083942unclassified Hyphomonas → Hyphomonas sp.1116Open in IMG/M
3300006789|Ga0098054_1232327Not Available668Open in IMG/M
3300006802|Ga0070749_10750237Not Available520Open in IMG/M
3300006810|Ga0070754_10064205All Organisms → Viruses → Predicted Viral1894Open in IMG/M
3300006810|Ga0070754_10104416All Organisms → Viruses → Predicted Viral1396Open in IMG/M
3300006810|Ga0070754_10264012All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae → unclassified Podoviridae → Puniceispirillum phage HMO-2011783Open in IMG/M
3300006810|Ga0070754_10301885Not Available718Open in IMG/M
3300006916|Ga0070750_10051799All Organisms → Viruses → Predicted Viral1986Open in IMG/M
3300006916|Ga0070750_10059457All Organisms → Viruses → Predicted Viral1833Open in IMG/M
3300006916|Ga0070750_10085050All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.1480Open in IMG/M
3300006916|Ga0070750_10303001Not Available683Open in IMG/M
3300006916|Ga0070750_10329565All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae647Open in IMG/M
3300006919|Ga0070746_10069788All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.1795Open in IMG/M
3300006919|Ga0070746_10224824All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae885Open in IMG/M
3300006919|Ga0070746_10233215All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae865Open in IMG/M
3300006919|Ga0070746_10308552All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae725Open in IMG/M
3300006919|Ga0070746_10511367Not Available526Open in IMG/M
3300006920|Ga0070748_1177557All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae784Open in IMG/M
3300006920|Ga0070748_1246036Not Available644Open in IMG/M
3300006920|Ga0070748_1260593All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae622Open in IMG/M
3300006922|Ga0098045_1081293All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae774Open in IMG/M
3300006929|Ga0098036_1143023Not Available732Open in IMG/M
3300007229|Ga0075468_10104437All Organisms → Viruses → environmental samples → uncultured Mediterranean phage894Open in IMG/M
3300007276|Ga0070747_1267999Not Available591Open in IMG/M
3300007539|Ga0099849_1188525Not Available781Open in IMG/M
3300009000|Ga0102960_1129489Not Available913Open in IMG/M
3300009071|Ga0115566_10159770All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.1400Open in IMG/M
3300009423|Ga0115548_1142913Not Available757Open in IMG/M
3300009498|Ga0115568_10273021All Organisms → Viruses → environmental samples → uncultured Mediterranean phage755Open in IMG/M
3300009507|Ga0115572_10542582Not Available643Open in IMG/M
3300010153|Ga0098059_1305376Not Available607Open in IMG/M
3300010318|Ga0136656_1266693Not Available561Open in IMG/M
3300010368|Ga0129324_10072358All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.1530Open in IMG/M
3300010368|Ga0129324_10181679All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.862Open in IMG/M
3300012920|Ga0160423_10927984Not Available584Open in IMG/M
3300017706|Ga0181377_1011134All Organisms → Viruses → Predicted Viral2146Open in IMG/M
3300017708|Ga0181369_1127634Not Available512Open in IMG/M
3300017710|Ga0181403_1081790All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerae bacterium GWF2_52_8671Open in IMG/M
3300017713|Ga0181391_1036651All Organisms → Viruses → Predicted Viral1183Open in IMG/M
3300017713|Ga0181391_1065208All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae → unclassified Podoviridae → Puniceispirillum phage HMO-2011844Open in IMG/M
3300017719|Ga0181390_1115873All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales702Open in IMG/M
3300017721|Ga0181373_1044130Not Available815Open in IMG/M
3300017727|Ga0181401_1065678All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64966Open in IMG/M
3300017729|Ga0181396_1030137All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.1081Open in IMG/M
3300017729|Ga0181396_1069710Not Available706Open in IMG/M
3300017740|Ga0181418_1164861Not Available531Open in IMG/M
3300017741|Ga0181421_1108272unclassified Hyphomonas → Hyphomonas sp.723Open in IMG/M
3300017753|Ga0181407_1093059All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae → unclassified Podoviridae → Puniceispirillum phage HMO-2011763Open in IMG/M
3300017756|Ga0181382_1093412Not Available820Open in IMG/M
3300017760|Ga0181408_1135217Not Available636Open in IMG/M
3300017763|Ga0181410_1201944Not Available544Open in IMG/M
3300017767|Ga0181406_1137252All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium735Open in IMG/M
3300017768|Ga0187220_1127352All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium770Open in IMG/M
3300017768|Ga0187220_1206282All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae → unclassified Podoviridae → Puniceispirillum phage HMO-2011591Open in IMG/M
3300017770|Ga0187217_1128836Not Available853Open in IMG/M
3300017779|Ga0181395_1107344Not Available893Open in IMG/M
3300017779|Ga0181395_1115696Not Available854Open in IMG/M
3300017781|Ga0181423_1306742Not Available584Open in IMG/M
3300017781|Ga0181423_1329885Not Available558Open in IMG/M
3300017782|Ga0181380_1083999All Organisms → Viruses → Predicted Viral1113Open in IMG/M
3300017782|Ga0181380_1144453All Organisms → Viruses812Open in IMG/M
3300017782|Ga0181380_1292846Not Available534Open in IMG/M
3300017952|Ga0181583_10567399Not Available687Open in IMG/M
3300019751|Ga0194029_1039976Not Available758Open in IMG/M
3300020595|Ga0206126_10320497Not Available696Open in IMG/M
3300021964|Ga0222719_10071038All Organisms → Viruses → Predicted Viral2603Open in IMG/M
3300022053|Ga0212030_1053750All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.573Open in IMG/M
3300022072|Ga0196889_1009509All Organisms → Viruses → Predicted Viral2155Open in IMG/M
3300022183|Ga0196891_1022519All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.1200Open in IMG/M
3300022929|Ga0255752_10404527Not Available536Open in IMG/M
3300025070|Ga0208667_1020311All Organisms → Viruses → Predicted Viral1299Open in IMG/M
3300025086|Ga0208157_1086376All Organisms → Viruses → environmental samples → uncultured Mediterranean phage775Open in IMG/M
3300025098|Ga0208434_1062469All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage789Open in IMG/M
3300025102|Ga0208666_1064905All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales979Open in IMG/M
3300025120|Ga0209535_1072866All Organisms → Viruses → Predicted Viral1338Open in IMG/M
3300025120|Ga0209535_1135443All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales807Open in IMG/M
3300025137|Ga0209336_10155574Not Available601Open in IMG/M
3300025168|Ga0209337_1316170Not Available555Open in IMG/M
3300025508|Ga0208148_1032706All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.1386Open in IMG/M
3300025645|Ga0208643_1112240Not Available733Open in IMG/M
3300025653|Ga0208428_1136107Not Available667Open in IMG/M
3300025674|Ga0208162_1166625All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage589Open in IMG/M
3300025759|Ga0208899_1069828All Organisms → Viruses → Predicted Viral1411Open in IMG/M
3300025769|Ga0208767_1049719All Organisms → Viruses → Predicted Viral1970Open in IMG/M
3300025769|Ga0208767_1064237All Organisms → Viruses → Predicted Viral1629Open in IMG/M
3300025769|Ga0208767_1065894All Organisms → Viruses → Predicted Viral1598Open in IMG/M
3300025806|Ga0208545_1005908All Organisms → Viruses → Predicted Viral4758Open in IMG/M
3300025849|Ga0209603_1294416All Organisms → Viruses570Open in IMG/M
3300025853|Ga0208645_1187668All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium745Open in IMG/M
3300025889|Ga0208644_1124356Not Available1225Open in IMG/M
3300029448|Ga0183755_1076718All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae → unclassified Podoviridae → Puniceispirillum phage HMO-2011727Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous36.27%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater23.53%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine18.63%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine5.88%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine4.90%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient2.94%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh1.96%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater0.98%
Surface SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater0.98%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine0.98%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water0.98%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater0.98%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water0.98%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000101Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010EnvironmentalOpen in IMG/M
3300000115Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011EnvironmentalOpen in IMG/M
3300000116Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010EnvironmentalOpen in IMG/M
3300000117Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010EnvironmentalOpen in IMG/M
3300001460Marine viral communities from the Pacific Ocean - LP-28EnvironmentalOpen in IMG/M
3300006029Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNAEnvironmentalOpen in IMG/M
3300006735Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaGEnvironmentalOpen in IMG/M
3300006737Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaGEnvironmentalOpen in IMG/M
3300006789Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaGEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300006920Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12EnvironmentalOpen in IMG/M
3300006922Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaGEnvironmentalOpen in IMG/M
3300006929Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaGEnvironmentalOpen in IMG/M
3300007229Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNAEnvironmentalOpen in IMG/M
3300007276Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31EnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300009000Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MGEnvironmentalOpen in IMG/M
3300009071Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405EnvironmentalOpen in IMG/M
3300009423Pelagic marine microbial communities from North Sea - COGITO_mtgs_100423EnvironmentalOpen in IMG/M
3300009498Pelagic marine microbial communities from North Sea - COGITO_mtgs_120426EnvironmentalOpen in IMG/M
3300009507Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607EnvironmentalOpen in IMG/M
3300010153Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaGEnvironmentalOpen in IMG/M
3300010318Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.8_DNAEnvironmentalOpen in IMG/M
3300010368Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNAEnvironmentalOpen in IMG/M
3300012920Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaGEnvironmentalOpen in IMG/M
3300017706Marine viral communities from the Subarctic Pacific Ocean - Lowphox_13 viral metaGEnvironmentalOpen in IMG/M
3300017708Marine viral communities from the Subarctic Pacific Ocean - Lowphox_04 viral metaGEnvironmentalOpen in IMG/M
3300017710Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 26 SPOT_SRF_2011-09-28EnvironmentalOpen in IMG/M
3300017713Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11EnvironmentalOpen in IMG/M
3300017719Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21EnvironmentalOpen in IMG/M
3300017721Marine viral communities from the Subarctic Pacific Ocean - Lowphox_09 viral metaGEnvironmentalOpen in IMG/M
3300017727Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 24 SPOT_SRF_2011-07-20EnvironmentalOpen in IMG/M
3300017729Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 19 SPOT_SRF_2011-01-11EnvironmentalOpen in IMG/M
3300017740Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 41 SPOT_SRF_2013-03-13EnvironmentalOpen in IMG/M
3300017741Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 44 SPOT_SRF_2013-06-19EnvironmentalOpen in IMG/M
3300017753Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 30 SPOT_SRF_2012-01-26EnvironmentalOpen in IMG/M
3300017756Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22EnvironmentalOpen in IMG/M
3300017760Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 31 SPOT_SRF_2012-02-16EnvironmentalOpen in IMG/M
3300017763Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 33 SPOT_SRF_2012-06-20EnvironmentalOpen in IMG/M
3300017767Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 29 SPOT_SRF_2011-12-20EnvironmentalOpen in IMG/M
3300017768Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23 (version 2)EnvironmentalOpen in IMG/M
3300017770Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15 (version 2)EnvironmentalOpen in IMG/M
3300017779Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 18 SPOT_SRF_2010-12-16EnvironmentalOpen in IMG/M
3300017781Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 46 SPOT_SRF_2013-08-14EnvironmentalOpen in IMG/M
3300017782Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19EnvironmentalOpen in IMG/M
3300017952Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300019751Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW18Oct16_MGEnvironmentalOpen in IMG/M
3300020595Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160412_1EnvironmentalOpen in IMG/M
3300021964Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34DEnvironmentalOpen in IMG/M
3300022053Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (v2)EnvironmentalOpen in IMG/M
3300022072Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v3)EnvironmentalOpen in IMG/M
3300022183Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v3)EnvironmentalOpen in IMG/M
3300022929Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaGEnvironmentalOpen in IMG/M
3300025070Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025086Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025098Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025102Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025120Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)EnvironmentalOpen in IMG/M
3300025137Marine viral communities from the Pacific Ocean - LP-32 (SPAdes)EnvironmentalOpen in IMG/M
3300025168Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)EnvironmentalOpen in IMG/M
3300025508Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025645Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (SPAdes)EnvironmentalOpen in IMG/M
3300025653Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025674Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025759Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)EnvironmentalOpen in IMG/M
3300025769Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)EnvironmentalOpen in IMG/M
3300025806Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025849Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607 (SPAdes)EnvironmentalOpen in IMG/M
3300025853Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)EnvironmentalOpen in IMG/M
3300025889Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)EnvironmentalOpen in IMG/M
3300029448Marine viral communities collected during Tara Oceans survey from station TARA_023 - TARA_E500000082EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
DelMOSum2010_1008561033300000101MarineMLGATTFSENAIADQGILFFGVSEQSGISSSANAAVGIMSGVATMD
DelMOSum2011_1006435013300000115MarineMLGATTFSENAIADQGILFFGVSEQSGISSSANAAVGIMSGVATMDGN
DelMOSpr2010_1002758073300000116MarineMLGASTFAERAFSDQAILLAGVSEMSGIASSANAGVGIMSGV
DelMOSpr2010_1002839213300000116MarineMLGATTFSENAIADQGILFFGVSEQSGISSSANAAV
DelMOSpr2010_1021785433300000116MarineMLGATTFSENAIADQGILFFGVSEQSGISSSANAA
DelMOWin2010_1020791513300000117MarineMFGASTFAEHAIANQGVLFFGVSEQSGISSSANAAVGIMSGVATMDGN
JGI24003J15210_1009762013300001460MarineMLGASTFAEHAIANQGVLFFGVSEQSGISSSANAGVG
Ga0075466_102659713300006029AqueousMLGATTFSENAIADQGILFFGVSEQSGISSSANVGVGIMSGVATMDGNFTATTAG
Ga0075466_111372313300006029AqueousMLGATTFSENAIADQGILFFGVSEQSGISSSANAAVGIMSGVATMDGNF
Ga0098038_105738033300006735MarineMLGASTFAEHAIANQGVLFFGVSEQSGISSSANAGVGIMSGVATMDGNFTA
Ga0098038_116756613300006735MarineMLGASTFAEHSIANQGVLFFGVSEQSGISSSANAGVGIMSGVATMDGN
Ga0098037_108394213300006737MarineMLGASTFAEHSIANQGVLFFGVSEQSGISSSANAG
Ga0098054_123232733300006789MarineMLGASTFAEHSIANQGILLFDSATMSGLSSSANVGVGVMSGVATMDSNFTATTAGM
Ga0070749_1075023733300006802AqueousMLGASTFAEHSIANQGILFFDSATMSGISSKTSVGVG
Ga0070754_1006420543300006810AqueousMLGASTFAERAFSDQAILLAGVSEMSGIASSANAGVGIMSGVS
Ga0070754_1010441633300006810AqueousMLGATTFSENAISDQGILFFCVSEQSGISSSANAAVGIMSGVATMDGNFT
Ga0070754_1026401213300006810AqueousMLGATTFSENAIADQGILFFGVSEQSGISSSANAAVGIMSGVA
Ga0070754_1030188533300006810AqueousMLGASALSEFSISDQGILLAGVSEMSGIASSANAGVGIMS
Ga0070750_1005179953300006916AqueousMLGATTFSENAIADQGILFFGVSEQSGISSSANAAVGIMSGVATMDGNFTATTAGMYISGST
Ga0070750_1005945713300006916AqueousMLGASTFAEHAIANQGVLFFGISEQSGISSSANAGVGIMSGVATMD
Ga0070750_1008505013300006916AqueousMLGASALSEFSISDQGIVLAGVSEMSGIASSANAGVGIMSG
Ga0070750_1030300113300006916AqueousMLGATTFSENAIADQGILFFGVSEQSGISSSANAAVGIMSGV
Ga0070750_1032956513300006916AqueousMLGASALSEYSISDQGIVLAGVSEMSGIASSANAGVGIMSGV
Ga0070746_1006978813300006919AqueousMLGASALSEYSISDQGIVLAGVSEMSGIASSANAGVGIMSGVS
Ga0070746_1022482433300006919AqueousMLGASTFAEHAIANQGVLFFGISEQSGISSSANAGVGIMSGV
Ga0070746_1023321533300006919AqueousMLGASTFAERAFSDQTILLAGVSEMSGIASSANAGVGIMSGVSTLVPAFTQT
Ga0070746_1030855233300006919AqueousMLGATTFSENAIADQGILFFGVSEQSGISSSANAAVGIMSGVATMDG
Ga0070746_1051136733300006919AqueousMLGASAICEHAISDQTILLAGVADISGVASTTNVGVGIMSGISTLIPAFTQT
Ga0070748_117755733300006920AqueousMLGATTFSENAIADQGILFFGVSEQSGISSSANAAVGIMCGVATMDGNFTAATAGMYIPG
Ga0070748_124603633300006920AqueousMLGASALSEFSISDQGILLAGVSEMSGIASSANAGVGIMSGVS
Ga0070748_126059333300006920AqueousMFGASTFAEHAIANQGVLFFGVSEQSGISSSANAGVGIMSGVATMDGNFT
Ga0098045_108129313300006922MarineMLGATTFSENAIADQGILFFGVSEQSGISSSTNAAVGIMSGVATMDGNFTATTAGMYIS
Ga0098036_114302333300006929MarineMLGASTFVEHSIANQGVLFFGVSEQSGISSSANAGVGIMSGVATMDGNFTA
Ga0075468_1010443713300007229AqueousMFGASTFAEHAIANQGVLFFGVSEQSGISSSANAGVGI
Ga0070747_126799933300007276AqueousMFGASTFAEHAIANQGVLFFGVSEQSGISSSANAAVGIMSGVATMDGNFTATTAGI
Ga0099849_118852513300007539AqueousMLGASTFAERAFSDQAILLAGVSEMSGIASSANAGVGIMSG
Ga0102960_112948913300009000Pond WaterMLGASALSEYSISDQGILLAGVSEMSGIASSANAGVGIMSGISSIS
Ga0115566_1015977033300009071Pelagic MarineMLGATTFSENAIADQGILFFGVSEQSGISSSANVGVGIMSGVA
Ga0115548_114291333300009423Pelagic MarineMLGASALSEFSISDQGIVLVGVSEMSGIASSANAGVGIMSGVSSISATAT
Ga0115568_1027302113300009498Pelagic MarineMLGATTFSENAIADQGILFFGVSEQSGISSSANAAVGIMSGVATMDGNFTATTAGMY
Ga0115572_1054258233300009507Pelagic MarineMLGATTFSENAIADQGIILSAISEQSGISSSANAAVGIMSGVATM
Ga0098059_130537633300010153MarineMLGASTFAEHSIANQGVLFFGVSEQSGISSSANAGVGIMSGVATMDGNFTA
Ga0136656_126669333300010318Freshwater To Marine Saline GradientMLGASTFAERAFSDQTILLAGVSEMSGIASSANAGVGIMSGVSSISATAT
Ga0129324_1007235833300010368Freshwater To Marine Saline GradientMLGASTFAERAFSDQTILLAGVSEMSGIASSANAGVGIMSGVSSMSSTATQTST
Ga0129324_1018167913300010368Freshwater To Marine Saline GradientMLGASTFAERAFSDQAILLAGVSEMSGIASSANAGVGIMSGVSSMSSTATQTSTGM
Ga0160423_1092798433300012920Surface SeawaterMLGASTFAEHSIANQGILFFDSATMSGISSKSSVGVGI
Ga0181377_101113413300017706MarineMLGASTFAEHSIANQGVLFFGVSEQSGISSSANAAVGIMSGVATMDGN
Ga0181369_112763433300017708MarineMLGATTFSENAIADQGIILSAISEQSGISSSANAAVGIMSGVA
Ga0181403_108179013300017710SeawaterMLGATTFSENAIADQGILFFGVSEQSGISSSANAAVGIMSGVATMDGNFTATTAGM
Ga0181391_103665113300017713SeawaterMLGATTFAENAIADQGILFFGVSEQSGISSSTNAAVGIMSGVATMDGNF
Ga0181391_106520813300017713SeawaterMLGATTFSENAIADQGILFFGVSEQSGISSSTNAAVGIMSGVATMDGNF
Ga0181390_111587313300017719SeawaterMLGATTFSENAIADQGILFFGVSEQSGISSSANAAVGIMSG
Ga0181373_104413033300017721MarineMLGASTFAEHSIANQGVLFFGVSEQSGISSSANAGVGIMSGVATMDGNFTATTA
Ga0181401_106567813300017727SeawaterMLGATTFAENAIADQGIILSAISEQSGISSSANAAVGIMSGV
Ga0181396_103013713300017729SeawaterMLGATTFSENALADQGILFFGVSEQSGISSSANAAVGIMSGVATMDGNFTATTAGMYISG
Ga0181396_106971013300017729SeawaterMLGATTFAENAIADQGILFFGVSEQSGISSSANAAVGIMSGVATMDGNFTATTAGMYISG
Ga0181418_116486113300017740SeawaterMLGASTFSEHAIANQGVLFFGVSEQSGISSSANVGVGIMSGVATMDGNS
Ga0181421_110827213300017741SeawaterMLGATTFSENAIADQGILFFGVSEQSGISSSTNAAVGIMSGVATMDGNFTATTAGM
Ga0181407_109305933300017753SeawaterMLGATTFSENAIADQGILFFGVSEQSGISSSTNAAVGIMSGVATMDGNFT
Ga0181382_109341213300017756SeawaterMLGATTFSENAIADQGILFCGVSEQSGISSSTNAAVGIMSGVATMDGLS
Ga0181408_113521733300017760SeawaterMLGATTFSENAIADQGILFFGVSEQSGISSSANAAVGIMSGVAT
Ga0181410_120194433300017763SeawaterMLGATTFAENAIADQGILFFGVSEQSGISSSANAGVGIM
Ga0181406_113725213300017767SeawaterMLGATTFSENAIADQGILFFGVSEQSGISSSANAAVG
Ga0187220_112735233300017768SeawaterMLGATTFSENAIADQGILFFGVSEQSGISSSANAAVGIMSGVATMDGNFTATTAGMYISGSTNA
Ga0187220_120628233300017768SeawaterMLGATTFSENAIADQGIILSAISEQSGISSSANAA
Ga0187217_112883613300017770SeawaterMLGATTFAENAIADQGILFFGVSEQSGISSSANAAVGIMSGVATMDGN
Ga0181395_110734433300017779SeawaterMLGATTFAENAIADQGILFFGVSEQSGISSSANAAVGIMSGVATMDGNFTATTAGMYISGST
Ga0181395_111569633300017779SeawaterMLGATTFSENAIADQGILFFGVSEQSGISSSTNAAVGIRSGVATM
Ga0181423_130674213300017781SeawaterMLGATTFSENAIADQGILFFGVSEQSGISSSTNAAVGIMSG
Ga0181423_132988533300017781SeawaterMLGASTFSEHAIANQGVLFFGVSEQSGISSSANAGVGIMSGVATMDGNFTATTAGM
Ga0181380_108399933300017782SeawaterMLGATTFSENSIADQGILFFGVSEQSGISSSANAAVGIMSGVATMDGNFTATTA
Ga0181380_114445333300017782SeawaterMLGATTFAENAIADQGILFFGVSEQSGISSSANAAVGIMSGV
Ga0181380_129284623300017782SeawaterMLGASTFAEHEIANQGVLFFGVSEQSGISSSANAGVGIMSGVATMDGNFTAT
Ga0181583_1056739933300017952Salt MarshMLGASALSEYALSDQSILLAGVSEMSGIASSANAGVGIMSGISSMNSTATQT
Ga0194029_103997643300019751FreshwaterMLGASALSEYSISDQSILLAGVSEMSGISSSANAAIGIMS
Ga0206126_1032049733300020595SeawaterMLGATTFSENAIADQGILFFGVSEQSGISSSANVGVGIMS
Ga0222719_1007103813300021964Estuarine WaterMLGASALSEYSIADQGILLAGVSEMSGISSSANAAIGIMSGVITVSSN
Ga0212030_105375033300022053AqueousMLGASTFAERAFSDQAILLAGVSEMSGIASSANAGVGIM
Ga0196889_100950913300022072AqueousMLGATTFSENAIADQGILFFGVSEQSGISSSANVGVGIMSGVATMDGK
Ga0196891_102251913300022183AqueousMLGATTFSENAIADQGILFFGVSEQSGISSSANAAVGIMSGVATMDGNFT
Ga0255752_1040452713300022929Salt MarshMLGASTFAEHSIANQGILFFDSATMSGISSKTSVGVGILAGIAS
Ga0208667_102031113300025070MarineMLGASALSEYSIADQSILLAGVSEMSGIASSANVGVG
Ga0208157_108637633300025086MarineMLGASTFAEHSIANQGVLFFGVSEQSGISSSANAGVGIMSGVA
Ga0208434_106246933300025098MarineMLGATTFSENAIADQGILFFGVSEQSGISSSANAAVGIMSGVATMDGNFTATTAGMYISG
Ga0208666_106490513300025102MarineMLGASTFAEHAIANQGVLFFGVSEQSGISSSANAGVGIMSGVATMDGNFTAT
Ga0209535_107286613300025120MarineMLGASTFAEHAIANQGVLFFGVSEQSGISSSANAGVGIMS
Ga0209535_113544333300025120MarineMLGASTFAEHAIANQGVLFFGVSEQSGISSSANVGVGIMSGVATMDGNFTAT
Ga0209336_1015557413300025137MarineMLGASTFAEYAIANQGVLFFGVSEQSGISSSANAGVGIMSGV
Ga0209337_131617023300025168MarineMLGASTFAEHAIANQGVLFFGVSEQSGISSSANAGV
Ga0208148_103270613300025508AqueousMLGASTFAERAFSDQAILLAGVSEMSGIASSANAGVGIMS
Ga0208643_111224013300025645AqueousMLGATTFSENAIADQGILFFGVSEQSGISSSANAAVGIMSGVATMDGNFTAT
Ga0208428_113610733300025653AqueousMLGASALSEFSISDQGIVLAGVSEMSGIASSANAGVGIMSGV
Ga0208162_116662533300025674AqueousMLGASALSEYALSDQGIVLVGVSEMSGIASSANAGVGIMSGVSSISATATQTS
Ga0208899_106982813300025759AqueousMLGATTFSENAISDQGILFFGVSEQSGISSSANAAVGIMSGVATMDGNFTATTAGMYISG
Ga0208767_104971943300025769AqueousMLGASALSEYSISDQGILLAGVSEQSGISSSANAAIGIMSGVITVSSNFAQSANAIY
Ga0208767_106423713300025769AqueousMLGATTFSENAIADQGILFFGVSEQSGISSSANAAVGIMSGVATMDGNFTATTAG
Ga0208767_106589413300025769AqueousMLGASALSEFSISDQGIVLAGVSEMSGIASSANAGVGIMSGVS
Ga0208545_100590813300025806AqueousMFGASTFAEHAIANQGVLFFGVSEQSGISSSANAGVGIMSGVAT
Ga0209603_129441633300025849Pelagic MarineMLGATTFSENAIADQGILFFGVSEQSGISSSANAAVGI
Ga0208645_118766833300025853AqueousMLGASTFAERAFSDQAILLAGVSEMSGIASSANAGVGIMSGVST
Ga0208644_112435633300025889AqueousMLGASALSEYALSDQGILLAGVSEMSGIASSANAG
Ga0183755_107671833300029448MarineMLGASALSEFSIADQGVLLAGVSEMSGIASSANAGVGIMSGVSSM


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.