NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F100934

Metagenome Family F100934

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F100934
Family Type Metagenome
Number of Sequences 102
Average Sequence Length 70 residues
Representative Sequence MKKVKFNVELTAPNNALKFKLKRRSMSYPDIIGGDFYDELSKKEKELFELIDFVDLLKNAKSKKISKIDIK
Number of Associated Samples 71
Number of Associated Scaffolds 102

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 35.29 %
% of genes near scaffold ends (potentially truncated) 23.53 %
% of genes from short scaffolds (< 2000 bps) 64.71 %
Associated GOLD sequencing projects 60
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (82.353 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine
(17.647 % of family members)
Environment Ontology (ENVO) Unclassified
(71.569 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(82.353 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 35.21%    β-sheet: 19.72%    Coil/Unstructured: 45.07%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 102 Family Scaffolds
PF14572Pribosyl_synth 18.63
PF01259SAICAR_synt 10.78
PF02222ATP-grasp 8.82
PF02769AIRS_C 6.86
PF00586AIRS 5.88
PF02700PurS 2.94
PF03332PMM 1.96
PF02945Endonuclease_7 1.96
PF13589HATPase_c_3 0.98
PF01541GIY-YIG 0.98
PF06745ATPase 0.98
PF13412HTH_24 0.98
PF00383dCMP_cyt_deam_1 0.98
PF09643YopX 0.98
PF00156Pribosyltran 0.98

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 102 Family Scaffolds
COG0152Phosphoribosylaminoimidazole-succinocarboxamide synthaseNucleotide transport and metabolism [F] 10.78
COG1828Phosphoribosylformylglycinamidine (FGAM) synthase, PurS subunitNucleotide transport and metabolism [F] 2.94
COG0561Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatasesCoenzyme transport and metabolism [H] 1.96


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A82.35 %
All OrganismsrootAll Organisms17.65 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000115|DelMOSum2011_c10060279Not Available1432Open in IMG/M
3300000117|DelMOWin2010_c10019413Not Available3577Open in IMG/M
3300000117|DelMOWin2010_c10019884Not Available3523Open in IMG/M
3300000117|DelMOWin2010_c10026097All Organisms → Viruses → Predicted Viral2933Open in IMG/M
3300000117|DelMOWin2010_c10036264Not Available2335Open in IMG/M
3300000137|LP_F_10_SI03_10DRAFT_c1027587Not Available876Open in IMG/M
3300001354|JGI20155J14468_10079954Not Available1223Open in IMG/M
3300005510|Ga0066825_10067682Not Available1282Open in IMG/M
3300006752|Ga0098048_1194043Not Available600Open in IMG/M
3300006789|Ga0098054_1174951Not Available787Open in IMG/M
3300006793|Ga0098055_1002088Not Available10516Open in IMG/M
3300006916|Ga0070750_10001006Not Available15821Open in IMG/M
3300006916|Ga0070750_10102995Not Available1321Open in IMG/M
3300006919|Ga0070746_10013453All Organisms → Viruses → Predicted Viral4593Open in IMG/M
3300006919|Ga0070746_10301460Not Available736Open in IMG/M
3300006920|Ga0070748_1054827Not Available1576Open in IMG/M
3300006920|Ga0070748_1068240Not Available1388Open in IMG/M
3300006924|Ga0098051_1032610Not Available1472Open in IMG/M
3300007276|Ga0070747_1079517Not Available1224Open in IMG/M
3300007540|Ga0099847_1180824Not Available619Open in IMG/M
3300007725|Ga0102951_1181561Not Available594Open in IMG/M
3300008050|Ga0098052_1023114All Organisms → cellular organisms → Bacteria2925Open in IMG/M
3300009001|Ga0102963_1001360Not Available10734Open in IMG/M
3300009001|Ga0102963_1017438Not Available3034Open in IMG/M
3300009027|Ga0102957_1016651All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Nitrincola phage 1M3-162502Open in IMG/M
3300009027|Ga0102957_1050460Not Available1427Open in IMG/M
3300009071|Ga0115566_10133631All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli1563Open in IMG/M
3300009071|Ga0115566_10277495Not Available995Open in IMG/M
3300009076|Ga0115550_1227700All Organisms → cellular organisms → Bacteria618Open in IMG/M
3300009077|Ga0115552_1056066Not Available1787Open in IMG/M
3300009426|Ga0115547_1116762All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli869Open in IMG/M
3300009433|Ga0115545_1328278Not Available506Open in IMG/M
3300009435|Ga0115546_1315655Not Available532Open in IMG/M
3300009447|Ga0115560_1238033Not Available699Open in IMG/M
3300009472|Ga0115554_1039103Not Available2230Open in IMG/M
3300009498|Ga0115568_10068675Not Available1815Open in IMG/M
3300009498|Ga0115568_10442224Not Available560Open in IMG/M
3300009508|Ga0115567_10049611Not Available3197Open in IMG/M
3300009703|Ga0114933_10558725Not Available740Open in IMG/M
3300010150|Ga0098056_1155060Not Available772Open in IMG/M
3300011013|Ga0114934_10501642Not Available537Open in IMG/M
3300017729|Ga0181396_1005314Not Available2620Open in IMG/M
3300017760|Ga0181408_1049345Not Available1128Open in IMG/M
3300017764|Ga0181385_1095864Not Available909Open in IMG/M
3300017764|Ga0181385_1158732Not Available686Open in IMG/M
3300017764|Ga0181385_1262639Not Available517Open in IMG/M
3300017773|Ga0181386_1043775All Organisms → cellular organisms → Bacteria1451Open in IMG/M
3300017824|Ga0181552_10010816Not Available5972Open in IMG/M
3300018416|Ga0181553_10112665Not Available1663Open in IMG/M
3300020165|Ga0206125_10016406Not Available4684Open in IMG/M
3300020165|Ga0206125_10078461All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1466Open in IMG/M
3300020175|Ga0206124_10082845Not Available1348Open in IMG/M
3300020175|Ga0206124_10092825Not Available1259Open in IMG/M
3300020428|Ga0211521_10048587Not Available2204Open in IMG/M
3300020438|Ga0211576_10071972Not Available1940Open in IMG/M
3300020438|Ga0211576_10123274Not Available1417Open in IMG/M
3300021957|Ga0222717_10003588Not Available11612Open in IMG/M
3300021957|Ga0222717_10004819Not Available9861Open in IMG/M
3300021957|Ga0222717_10006553Not Available8321Open in IMG/M
3300021957|Ga0222717_10043482Not Available2930Open in IMG/M
3300021957|Ga0222717_10048142Not Available2771Open in IMG/M
3300021957|Ga0222717_10320161Not Available879Open in IMG/M
3300021957|Ga0222717_10433453Not Available720Open in IMG/M
3300021958|Ga0222718_10000127Not Available76010Open in IMG/M
3300021958|Ga0222718_10062672Not Available2305Open in IMG/M
3300021958|Ga0222718_10119244Not Available1529Open in IMG/M
3300021958|Ga0222718_10127348Not Available1464Open in IMG/M
3300021959|Ga0222716_10045274Not Available3138Open in IMG/M
3300021959|Ga0222716_10200817Not Available1262Open in IMG/M
3300021959|Ga0222716_10249335Not Available1096Open in IMG/M
3300021960|Ga0222715_10162010All Organisms → cellular organisms → Bacteria1375Open in IMG/M
3300021964|Ga0222719_10057244All Organisms → Viruses → Predicted Viral2952Open in IMG/M
3300022061|Ga0212023_1028118Not Available775Open in IMG/M
3300022164|Ga0212022_1060704Not Available583Open in IMG/M
3300022929|Ga0255752_10248943Not Available790Open in IMG/M
(restricted) 3300023109|Ga0233432_10369929Not Available637Open in IMG/M
(restricted) 3300023210|Ga0233412_10122812All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli1100Open in IMG/M
(restricted) 3300023210|Ga0233412_10129416Not Available1072Open in IMG/M
(restricted) 3300023276|Ga0233410_10069740All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli1067Open in IMG/M
(restricted) 3300024261|Ga0233439_10305126Not Available681Open in IMG/M
(restricted) 3300024264|Ga0233444_10308758Not Available680Open in IMG/M
3300025084|Ga0208298_1029860Not Available1147Open in IMG/M
3300025084|Ga0208298_1058245Not Available744Open in IMG/M
3300025108|Ga0208793_1005905Not Available5399Open in IMG/M
3300025577|Ga0209304_1012307Not Available3053Open in IMG/M
3300025590|Ga0209195_1080506All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Carnobacteriaceae → Marinilactibacillus → Marinilactibacillus psychrotolerans752Open in IMG/M
3300025645|Ga0208643_1021202Not Available2268Open in IMG/M
3300025685|Ga0209095_1018323Not Available2969Open in IMG/M
3300025685|Ga0209095_1177072Not Available603Open in IMG/M
3300025685|Ga0209095_1216319Not Available522Open in IMG/M
3300025759|Ga0208899_1207813Not Available617Open in IMG/M
3300025769|Ga0208767_1063869All Organisms → Viruses → Predicted Viral1637Open in IMG/M
3300025770|Ga0209362_1213531Not Available641Open in IMG/M
3300025816|Ga0209193_1002967Not Available7613Open in IMG/M
3300025890|Ga0209631_10039398All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon3260Open in IMG/M
3300026183|Ga0209932_1012820All Organisms → cellular organisms → Bacteria2265Open in IMG/M
3300026187|Ga0209929_1047115Not Available1236Open in IMG/M
(restricted) 3300027996|Ga0233413_10234053Not Available779Open in IMG/M
3300029448|Ga0183755_1004074Not Available7108Open in IMG/M
3300029448|Ga0183755_1014809All Organisms → cellular organisms → Bacteria2827Open in IMG/M
3300031851|Ga0315320_10010828Not Available7330Open in IMG/M
3300032277|Ga0316202_10377068Not Available663Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine17.65%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water15.69%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous12.75%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine9.80%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater6.86%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater5.88%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water5.88%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine4.90%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine4.90%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater3.92%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh2.94%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine1.96%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface1.96%
MarineEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Marine0.98%
Microbial MatEnvironmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat0.98%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine0.98%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater0.98%
WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Water0.98%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000115Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011EnvironmentalOpen in IMG/M
3300000117Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010EnvironmentalOpen in IMG/M
3300000137Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - sample F_10_SI03_10EnvironmentalOpen in IMG/M
3300001354Pelagic Microbial community sample from North Sea - COGITO 998_met_05EnvironmentalOpen in IMG/M
3300005510Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV45EnvironmentalOpen in IMG/M
3300006752Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaGEnvironmentalOpen in IMG/M
3300006789Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaGEnvironmentalOpen in IMG/M
3300006793Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaGEnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300006920Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12EnvironmentalOpen in IMG/M
3300006924Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaGEnvironmentalOpen in IMG/M
3300007276Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31EnvironmentalOpen in IMG/M
3300007540Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007725Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_B_H2O_MGEnvironmentalOpen in IMG/M
3300008050Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaGEnvironmentalOpen in IMG/M
3300009001Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MGEnvironmentalOpen in IMG/M
3300009027Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MGEnvironmentalOpen in IMG/M
3300009071Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405EnvironmentalOpen in IMG/M
3300009076Pelagic marine microbial communities from North Sea - COGITO_mtgs_100511EnvironmentalOpen in IMG/M
3300009077Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328EnvironmentalOpen in IMG/M
3300009426Pelagic marine microbial communities from North Sea - COGITO_mtgs_100420EnvironmentalOpen in IMG/M
3300009433Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330EnvironmentalOpen in IMG/M
3300009435Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413EnvironmentalOpen in IMG/M
3300009447Pelagic marine microbial communities from North Sea - COGITO_mtgs_110509EnvironmentalOpen in IMG/M
3300009472Pelagic marine microbial communities from North Sea - COGITO_mtgs_110404EnvironmentalOpen in IMG/M
3300009498Pelagic marine microbial communities from North Sea - COGITO_mtgs_120426EnvironmentalOpen in IMG/M
3300009508Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412EnvironmentalOpen in IMG/M
3300009703Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV12_W25 metaGEnvironmentalOpen in IMG/M
3300010150Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaGEnvironmentalOpen in IMG/M
3300011013Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV10_white metaGEnvironmentalOpen in IMG/M
3300017729Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 19 SPOT_SRF_2011-01-11EnvironmentalOpen in IMG/M
3300017760Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 31 SPOT_SRF_2012-02-16EnvironmentalOpen in IMG/M
3300017764Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11EnvironmentalOpen in IMG/M
3300017773Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 9 SPOT_SRF_2010-03-24EnvironmentalOpen in IMG/M
3300017824Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018416Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300020165Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1EnvironmentalOpen in IMG/M
3300020175Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160321_2EnvironmentalOpen in IMG/M
3300020428Marine microbial communities from Tara Oceans - TARA_E500000331 (ERX556032-ERR599094)EnvironmentalOpen in IMG/M
3300020438Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)EnvironmentalOpen in IMG/M
3300021957Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18DEnvironmentalOpen in IMG/M
3300021958Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27DEnvironmentalOpen in IMG/M
3300021959Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13DEnvironmentalOpen in IMG/M
3300021960Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9DEnvironmentalOpen in IMG/M
3300021964Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34DEnvironmentalOpen in IMG/M
3300022061Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v2)EnvironmentalOpen in IMG/M
3300022164Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v2)EnvironmentalOpen in IMG/M
3300022929Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaGEnvironmentalOpen in IMG/M
3300023109 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_10_MGEnvironmentalOpen in IMG/M
3300023210 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_4_MGEnvironmentalOpen in IMG/M
3300023276 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_1_MGEnvironmentalOpen in IMG/M
3300024261 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_100_MGEnvironmentalOpen in IMG/M
3300024264 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_124_October2016_10_MGEnvironmentalOpen in IMG/M
3300025084Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025108Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025577Pelagic marine microbial communities from North Sea - COGITO_mtgs_100423 (SPAdes)EnvironmentalOpen in IMG/M
3300025590Pelagic marine microbial communities from North Sea - COGITO_mtgs_100420 (SPAdes)EnvironmentalOpen in IMG/M
3300025645Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (SPAdes)EnvironmentalOpen in IMG/M
3300025685Pelagic marine microbial communities from North Sea - COGITO_mtgs_110404 (SPAdes)EnvironmentalOpen in IMG/M
3300025759Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)EnvironmentalOpen in IMG/M
3300025769Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)EnvironmentalOpen in IMG/M
3300025770Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_165m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025816Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330 (SPAdes)EnvironmentalOpen in IMG/M
3300025890Pelagic Microbial community sample from North Sea - COGITO 998_met_08 (SPAdes)EnvironmentalOpen in IMG/M
3300026183Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MG (SPAdes)EnvironmentalOpen in IMG/M
3300026187Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG (SPAdes)EnvironmentalOpen in IMG/M
3300027996 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_6_MGEnvironmentalOpen in IMG/M
3300029448Marine viral communities collected during Tara Oceans survey from station TARA_023 - TARA_E500000082EnvironmentalOpen in IMG/M
3300031851Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 21515EnvironmentalOpen in IMG/M
3300032277Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 3-month pyrrhotiteEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
DelMOSum2011_1006027923300000115MarineMKKVKFNVELTAPNNALTFKLKRRSMSYPDIIGGDFYDELSKKEKELFELIDFADLLKHAKTKKISKVDIK*
DelMOWin2010_1001941373300000117MarineMKKVKFNVELTAPNNALKFKLKRRSMSYPDIIGGDFYDELSKKEKELFELIDFVDLLKNAKSKKISKIDIR*
DelMOWin2010_1001988433300000117MarineMKKVKFNVELIAPKNALKFKLKRRSMSYPDIIGGDFYDELSKKEKDLFELIDFVDLLKNAKSKKISKVDIK*
DelMOWin2010_1002609723300000117MarineMKKVKFNVELTTPNNILRFKLKRRSMSYPDVIGGDFYDELSNEEKELFELIDFVDLLKNAKSKKITVIDIT*
DelMOWin2010_1003626433300000117MarineMKKVKFNVELTAPNNALTFKLKRRSMSYPDIIGGDFYDELSKKEKELFELIDFVGLLKSSKSKKISKIDIK*
LP_F_10_SI03_10DRAFT_102758723300000137MarineMKKVKFNVELTAPNNALTFKLKRRSMSYPDIIGGDFYDELSKKEKDLFELIDFVDLLKSAKSKKISKVDIR*
JGI20155J14468_1007995433300001354Pelagic MarineMKKVKFNVELTAPNNALKFKLKRRTMSYPDIIGGDFYDELSKKEKELFELIDFVDLL
Ga0066825_1006768213300005510MarineMKKVKFNVELTAPNNALKFKLKRRSMSYPDIIGGDFYDELSKKEKQLFELIDFVDLLKSAKSKKISKVDIK*
Ga0098048_119404323300006752MarineMKKVKLNIELTVPNNILRFKLKRCSMSYPDVIGGDFYDELSNKEKELFELIDFVDLLKNAKTQKINEIDIT*
Ga0098054_117495133300006789MarineMKKVKFNVELTAPKNALKFKLKRRSMSYPDIIGGDFYDELSKKEKELFELIDFVDLLKSAKSKKISKIDII*
Ga0098055_100208843300006793MarineMKKVKFNVELTAPKNALKFKLKRRSMSYPDIIGGDFYGELSKKEKELFELIDFVDLLKRAKTKKISKIDIR*
Ga0070750_10001006323300006916AqueousMKKVKFNVELTVPNNALTFKLKRRSMSYPDIIGGDFYFKLSKKEKDLFELIDFADLLKHAKTKKISKVDIK*
Ga0070750_1010299543300006916AqueousMKKVKFNVELTTPNNILRFKLKRRSMSYPDIIGGDFYDELSNEEKELFELIDFVDLLKNAKSKKI
Ga0070746_1001345323300006919AqueousMKKVKFNVELTTPNNILRFKLKRRSMSYPDIIGGDFYDELSNEEKELFELIDFVDLLKNAKSKKITVIDIT*
Ga0070746_1030146023300006919AqueousMKKVKFNVELTAPSNALKFKLKRRSMSYPDIIGGDFYDELSKKEKELFELIDFVDLLKHAKTKKISKVDIK*
Ga0070748_105482713300006920AqueousMKKVKFNVELTVPNNALTFKLKRRSMSYPDIIGGDFYDELSKKEKELFELIDFVDLLKHAKTKKISKVDIK*
Ga0070748_106824053300006920AqueousNVELTVPNNALTFKLKRRSMSYPDIIGGDFYFKLSKKEKDLFELIDFADLLKHAKTKKISKVDIK*
Ga0098051_103261033300006924MarineMKKVKFNVELTAPKNALKFKLKRRSMSYPDIIGGDFYDELSKKEKELFELIDFVDLLKRAKTKKISKIDIR*
Ga0070747_107951713300007276AqueousLSMKKVKFNVELIAPNNALKFKLKRRSMSYPDIIGGDFYDELSKKEKELFELIDFVDLLKHAKTKKISKVDIK*
Ga0099847_118082423300007540AqueousMKKVKFNVELTAPNNALKFKLKRRSMSYPDIIGGDFYEELSKKEKGLFELIDFVDLLKSAKSKKISKIDIK*
Ga0102951_118156113300007725WaterMKKVKFNVELTAPNNALTFKLKRRSMSYPDIIGGDFYDELSKKEKDLFELIDFVDLLKNAKSKKISKIDIK*
Ga0098052_102311413300008050MarineMRQYKKVKFNIELTVPNNVLKFKLKRRSMSYPDVIGGDFYDELSSKEKELFELIDFVDLLKNAKTQKISKIDIT*
Ga0102963_1001360103300009001Pond WaterMKKIKFNVELTAPNNALKFKLKRRSISYPDIIGGDFYSELSKKEQELFELIDFIDLLKNANSKKISNLDIHS*
Ga0102963_101743843300009001Pond WaterMKKVKFNVELTAPKNALKFKLKRRSMSYPDIIGGDFYDELSKKEKELFELIDFVDLLKHAKSKKISKIDIK*
Ga0102957_101665113300009027Pond WaterFNVELTAPNNALTFKLKRRSMSYPDIIGGDFYDELSKKEKELFELIDFIDLLKNAKSKRIFDFKID*
Ga0102957_105046033300009027Pond WaterFNVELTAPNNALTFKLKRRSMSYPDIIGGDFYDELSKKEKDLFELIDFVDLLKNAKSKKISKIDIK*
Ga0115566_1013363123300009071Pelagic MarineMKKVKFNVELTAPNNALTFKLKRRSMSYPDIIGGDFYDELSKKEKELFELIDFVDLLKHAKTKKISKVDIK*
Ga0115566_1027749523300009071Pelagic MarineMKKVKFNVELTAPNNALKFKLKRRSMSYPDIIGGDFYEELSKKEKDLFELIDFVDLLKSAKSKKISKIDIK*
Ga0115550_122770013300009076Pelagic MarineMKKVKFNVELTAPNNALTFKLKRRSMSYPDIIGGDFYDELSKKEKELFELIDFVDLLKHAKTKKVSKVDIK*
Ga0115552_105606633300009077Pelagic MarineMKKVKFNVELTAPNNALKFKLKRRTMSYPDIIGGDFYDELSKKEKELFELIDFVDLLKHAKTKKVSKVDIR*
Ga0115547_111676223300009426Pelagic MarineMKKVKFNVELTAPNNALTFKLKRRSMSYPDIIGGDFYDELSKKEKELFELIDFVDLLKHAKTKKVSKIDIK*
Ga0115545_132827813300009433Pelagic MarineILSMKKVKFNVELTAPNNALKFKLKRRSMSYPDIIGGDFYDELSKKEKDLFELIDFVDLLKSAKSKKISKIEIR*
Ga0115546_131565513300009435Pelagic MarineKKVKFNVELTAPNNALKFKLKRRSMSYPDIIGGDFYDELSKKEKDLFELIDFVDLLKSAKSKKISKIDIK*
Ga0115560_123803323300009447Pelagic MarineMKKVKFNVELTAPNNALKFKLKRRSMSYPDIIGGDFYDELSKKEKELFELIDFVDLLKHAKTKKVSKVDIR*
Ga0115554_103910333300009472Pelagic MarineMKKVKFNVELTAPNNALKFKLKRRSMSYPDIIGGDFYDELSKKEKDLFELIDFVDLLKRAKSKKISKIDIK*
Ga0115568_1006867523300009498Pelagic MarineMKKVKFNVELTAPNNALKFKLKRRSMSYPDIIGGDFYDELSKKEKDLFELIDFVDLLKNAKSKKISKIDIK*
Ga0115568_1044222413300009498Pelagic MarineMKKVKFNVELTAPNNALKFKLKRRTMSYPDIIGGDFYDELSKKEKELFELIDFVDLLKNAKSKKISKIDIK*
Ga0115567_1004961143300009508Pelagic MarineMKKVKFNVELTAPNNALKFKLKRRSMSYPDIIGGDFYDELSKKEKDLFELIDFVDLLKSAKSKKISKIDIK*
Ga0114933_1055872523300009703Deep SubsurfaceMKKVKFNVELTAPNNALKFKLKRRSMSYPDIIGGDFYEELSKKEKDLFELIDFVDLLKSAKTKKISKV
Ga0098056_115506023300010150MarineMKKVKFNVELTAPNNALKFKLKRRSMSYPDIIGGDFYNELSKKEKELFELIDFVDLLKSAKSKKISKIDII*
Ga0114934_1050164223300011013Deep SubsurfaceMKKVKFNVELTAPNNALKFKLKRQSMSYPDIIGGDFYEELSKKEKDLFELIDFVDLLKSAKSKKISKIDIK*
Ga0181396_100531443300017729SeawaterMKKVKFNIELTAPNNALTFKLKRRSMSYPDIIGGDFYSELSKKEKDLFELIDFVDLLKSAKSKNISKIDIK
Ga0181408_104934523300017760SeawaterMKKVKFNVELTAPNNALIFKLKRQSMSYPNIIGGDFYSELSKKEKELFELIDFVDLLKSAKSKKISKVDIK
Ga0181385_109586423300017764SeawaterMKKVKFDVKLTAPKNALKFKLKRRSMSYPDIIGGDFYDELSKKEKELFELIDFVDLLKNAKTKKISKVRIK
Ga0181385_115873213300017764SeawaterTAPNNALKFKLKRRSMSYPDIIGGDFYDELSKKEKELFELIDFVDLLKNAKSKKISKIDI
Ga0181385_126263913300017764SeawaterMKKVKFNVELTAPNNALKFKLKRRSMSYPDIIGGDFYGELSKKEKELFELIDFVDLLKNA
Ga0181386_104377533300017773SeawaterMKKVKFNVELTAPNNALIFKLKRRSMSYPDIIGGDFYFKLSKKEKDLFELIDFVDLLKSAKSKKISKIDIK
Ga0181552_1001081693300017824Salt MarshMKKVKFNVELTAPNNALKFKLKRRSMSYPDIIGGDFYDELSKKEKDLFELIDFVDLLKSAKSKKISKIEIR
Ga0181553_1011266523300018416Salt MarshMKKVKFNVELTAPNNALTFKLKRRSMSYPDIIGGDFYDELSKKEKDLFELIDFVDLLKSAKSKKISKIEIR
Ga0206125_1001640653300020165SeawaterMKKVKFNVELTAPNNALKFKLKRRSMSYPDIIGGDFYDELSKKEKELFELIDFVDLLKSAKSKKISKIEIR
Ga0206125_1007846123300020165SeawaterMKKVKFNIELTAPNNALKFKLKRQSMSYPDIIGGDFYDELSKKEKDLFELIDFVDLLKSAKSKKISKIDIK
Ga0206124_1008284533300020175SeawaterRILSMKKVKFNVELTAPNNALTFKLKRRSMSYPDIIGGDFYDELSKKEKELFELIDFVDLLKSAKSKKISKIEIR
Ga0206124_1009282523300020175SeawaterMKKVKFNVELTAPNNALKFKLKRRTMSYPDIIGGDFYDELSKKEKELFELIDFVDLLKHAKTKKVSKVDIR
Ga0211521_1004858733300020428MarineMKKVKFNVELTAPNNALKFKLKRQSMSYPDIIGGDFYEELSKKEKDLFELIDFVDLLKSAKSKKISKIDIK
Ga0211576_1007197223300020438MarineMKTVKFNVELTAPNNALIFKLKRQSMSYPNIIGGDFYSELSKKEKELFELIDFVDLLKSAKSKKISKVDIK
Ga0211576_1012327443300020438MarineMKKVKFNIELTAPNNALTFKLKRRSMSYPDIIGGDFYSELSKKEKDLFELIDFVDLLKRAKSKKISKIDIK
Ga0222717_10003588103300021957Estuarine WaterMKKVKFNVELTAPNNALTFKLKRRSMSYPDIIGGDFYDELSKKEKELFELIDFVDLLKSSKSKKISKIDIK
Ga0222717_10004819213300021957Estuarine WaterMKRVKFNVELTAPNNALTFKLKRRSMSYPDIIGGDFYDELSKKEKELFELIDFVDLLKNAKSKKISKIDIR
Ga0222717_10006553103300021957Estuarine WaterMKKVKFNVELTVPNNVLRFKLKRRSMSYPDIIGGDFYNELSKKEKELFELIDFVDLLKNAKTQKINEIDIT
Ga0222717_1004348253300021957Estuarine WaterMKKVKFNVELTAPNNALKFKLKRRSMSYPDIIGGDFYDELSKKEKELFELIDFVDLLKNAKSKKISKIDIR
Ga0222717_1004814273300021957Estuarine WaterMKKVKFNVELTAPNNALKFKLKRRSMSYPDIIGGDFYDELSKKEKELFELIDFVDLLKNAKSKKISKIDIK
Ga0222717_1032016123300021957Estuarine WaterMKKIVKFNVELTVPNNVLRFKLKRRSMSYPDFIGGDFYDELSNKEKELFELIDFVDLLKNAKTQKINEIDIT
Ga0222717_1043345313300021957Estuarine WaterMKKVKFNVELTAPNNALKFKLKRRSMSYPDIIGGDFYDELSKKEKGLFELIDFVDLLKSAKSKNISKIDIK
Ga0222718_10000127583300021958Estuarine WaterMKKVKFNVELTAPNNALTFKLKRRSMSYPDIIGGDFYDELSKKEKELFELIDFIDLLKNAKSKRIFDFKID
Ga0222718_1006267253300021958Estuarine WaterMKKVKFNVELTAPNNALTFKLKRRSMSYPDIIGGDFYDELSKKEKDLFELIDFVDLLKNAKSKKISKIDIK
Ga0222718_1011924413300021958Estuarine WaterKFNVELTAPNNALTFKLKRRSMSYPDIIGGDFYDELSKKEKELFELIDFVDLLKNAKSKKISKIDIR
Ga0222718_1012734813300021958Estuarine WaterMKKVKFNVELTVPNNVLRFKLKRRSMSYPDIIGGDFYDELSKKEKELFELIDFVDLLKNAKTQKINEIDIT
Ga0222716_1004527473300021959Estuarine WaterMKKIVKFNVELTVPNNVLRFKLKKRSMSYPDFIGGDFYDELSNKEKELFELIDFVDLLKNAKTQKINEIDIT
Ga0222716_1020081723300021959Estuarine WaterMKKVKFNVELTAPNNALTFKLKRRSMSYPDIIGGDFYDELSKKEKELFELIDFVDLLKNAKSKKINKIDIK
Ga0222716_1024933513300021959Estuarine WaterFNVELTAPNNALIFKLKRQSMSYPNIIGGDFYSELSKKEKELFELIDFVDLLKSAKSKKISKVDIK
Ga0222715_1016201013300021960Estuarine WaterMKKVKFNVELTAPNNALTFKLKRRSMSYPDIIGGDFYDELSKKEKELFELIDFVDLL
Ga0222719_1005724443300021964Estuarine WaterMKKVKFNVELTVPNNVLRFKLKRRSMSYPDVIGGDFYDELSSKEKELFELIDFVDLLKNAKTQKINEINIT
Ga0212023_102811823300022061AqueousMKKVKFNVELTVPNNALTFKLKRRSMSYPDIIGGDFYFKLSKKEKDLFVPIDFADLLKHAKTKKISKVDIK
Ga0212022_106070413300022164AqueousMKKVKFNVELTVPNNALTFKLKRRSMSYPDIIGGDFYFKLSKKEKDLFELIDFADLLKHAKTKKISKVDIK
Ga0255752_1024894323300022929Salt MarshMKKVKFNVELTAPNNALTFKLKRRSMSYPDIIGGDFYDELSKKEKDLFELIDFVDLLKSAKSKKISKIE
(restricted) Ga0233432_1036992923300023109SeawaterMKKVKFNVELTAPNNALTFKLKRRSMSYPDIIGGDFYDELSKKEKELFELIDFVDLLKNAKSKKISKIDIR
(restricted) Ga0233412_1012281223300023210SeawaterMKKVKFNVELTAPNNALTFKLKRRSMSYPDIIGGDFYDELSEKEKELFELIDFVDLLKNAKSKKISKIDIR
(restricted) Ga0233412_1012941623300023210SeawaterMKKVKFNVELTAPNNALKFKLKRRSMSYPDIIGGDFYGELSKKEKELFELIDFVDLLKNAKSKKISKIDIR
(restricted) Ga0233410_1006974023300023276SeawaterMKKVKFNVELTAPNNALTFKLKRRSMSYPDIIGGDFYDELSKKEKDLFELIDFVDLLKSAKSKKISK
(restricted) Ga0233439_1030512623300024261SeawaterMKKVKFNVELTAPNNALTFKLKRRSMSYPDIIGGDFYDELSKKEKDLFELIDFVDLLKSAKSKKISKVDIR
(restricted) Ga0233444_1030875813300024264SeawaterMKKVKFNVELTAPNNALTFKLKRRSMSYPDIIGGDFYDELSKKEKDLFELIDFVDLLK
Ga0208298_102986013300025084MarineMKKVKFNVELTAPKNALKFKLKRRSMSYPDIIGGDFYDELSKKEKELFELIDFVDLLKRAKTKKISKIDIR
Ga0208298_105824513300025084MarineMKKVKLNIELTVPNNILRFKLKRCSMSYPDVIGGDFYDELSNKEKELFELIDFVDLLKNAKTQKINEIDIT
Ga0208793_100590583300025108MarineMKKVKFNVELTAPKNALKFKLKRRSMSYPDIIGGDFYGELSKKEKELFELIDFVDLLKRAKTKKISKIDIR
Ga0209304_101230743300025577Pelagic MarineMKKVKFNVELTAPNNALKFKLKRRSMSYPDIIGGDFYEELSKKEKDLFELIDFVDLLKSAKSKKISKIDIK
Ga0209195_108050623300025590Pelagic MarineMKKVKFNVELTAPNNALTFKLKRRSMSYPDIIGGDFYDELSKKEKELFELIDFVDLLKHAKTKKISKVDIK
Ga0208643_102120253300025645AqueousMKKVKFNVELTVPNNALTFKLKRRSMSYPDIIGGDFYDELSKKEKELFELIDFADLLKHAKTKKISKVDIK
Ga0209095_101832323300025685Pelagic MarineMKKVKFNVELTAPNNALKFKLKRRSMSYPDIIGGDFYDELSKKEKDLFELIDFVDLLKRAKSKKISKIDIK
Ga0209095_117707213300025685Pelagic MarineMKKVKFNVELTAPNNALKFKLKRRTMSYPDIIGGDFYDELSKKEKELFELIDFVDLLKHAKTK
Ga0209095_121631923300025685Pelagic MarineFNVELTAPNNALKFKLKRRTMSYPDIIGGDFYDELSKKEKELFELIDFVDLLKHAKTKKISKVDIK
Ga0208899_120781323300025759AqueousMKKVKFNVELTTPNNILRFKLKRRSMSYPDIIGGDFYDELSNEEKELFELIDFVDLLKNA
Ga0208767_106386923300025769AqueousMKKVKFNVELTTPNNILRFKLKRRSMSYPDIIGGDFYDELSNEEKELFELIDFVDLLKNAKSKKITVIDIT
Ga0209362_121353123300025770MarineMKKVKFDVKLTAPKNALKFKLKRRSMSYPDIIGGDFYDELSKKEKELFELIDFVDLLKRAKTKKISKVDIR
Ga0209193_100296733300025816Pelagic MarineMKKVKFNVELTAPNNALKFKLKRRSMSYPDIIGGDFYDELSKKEKELFELIDFVDLLKHAKTKKISKVDIK
Ga0209631_1003939833300025890Pelagic MarineMKKVKFNVELTAPNNALKFKLKRRSMSYPDIIGGDFYDELSKKEKDLFELIDFVDLLKSAKSKKISKIDIK
Ga0209932_101282023300026183Pond WaterMKKIKFNVELTAPNNALKFKLKRRSISYPDIIGGDFYSELSKKEQELFELIDFIDLLKNANSKKISNLDIHS
Ga0209929_104711523300026187Pond WaterMKKVKFNVELTAPKNALKFKLKRRSMSYPDIIGGDFYDELSKKEKELFELIDFVDLLKHAKSKKISKIDIK
(restricted) Ga0233413_1023405323300027996SeawaterSMKKVKFNVELTAPNNALKFKLKRRSMSYPDIIGGDFYGELSKKEKELFELIDFVDLLKNAKSKKISKIDIR
Ga0183755_100407423300029448MarineMKKVKFNIELTAPNNALKFKLKRRSMSYPDIIGGDFYSELSKKEKELFELIDFVDLLKHAKSKRISKIDIK
Ga0183755_101480913300029448MarineMKKVKFNVELTAPNNALTFKLKRRSMSYPDIIGGDFYDELPKKEKELFELIDFVDLLKHAKTKKISKVDIK
Ga0315320_10010828213300031851SeawaterKKVKFNVELTAPNNALTFKLKRRSMSYPDIIGGDFYDELSKKEKELFELIDFVDLLKNAKSKKINKIDIK
Ga0316202_1037706833300032277Microbial MatMKKVKFNVELIAPNNALKFKLKRRSMSYPDIIGGDFYDELSKKEKELFELIDFVDLLKHAKTKKISKVDIK


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