Metagenome / Metatranscriptome Family F100919

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F100919
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	48 residues
Representative Sequence	MNAIVATLYRDLTCAAAALVISYVVGASFVQSTATAPGTPAAVTAQQA
Number of Associated Samples	77
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	76.24 %
% of genes near scaffold ends (potentially truncated)	27.45 %
% of genes from short scaffolds (< 2000 bps)	85.29 %
Associated GOLD sequencing projects	75
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (58.824 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (34.314 % of family members)
Environment Ontology (ENVO)	Unclassified (44.118 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.078 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 52.63% β-sheet: 0.00% Coil/Unstructured: 47.37%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF00392	GntR	26.47
PF00056	Ldh_1_N	16.67
PF02866	Ldh_1_C	7.84
PF00005	ABC_tran	7.84
PF02771	Acyl-CoA_dh_N	0.98
PF09317	ACDH_C	0.98
PF08501	Shikimate_dh_N	0.98
PF13466	STAS_2	0.98
PF11799	IMS_C	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0039	Malate/lactate dehydrogenase	Energy production and conversion [C]	24.51
COG1486	Alpha-galactosidase/6-phospho-beta-glucosidase, family 4 of glycosyl hydrolase	Carbohydrate transport and metabolism [G]	16.67
COG0169	Shikimate 5-dehydrogenase	Amino acid transport and metabolism [E]	0.98
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	58.82 %
Unclassified	root	N/A	41.18 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	58.82 %
Unclassified	root	N/A	41.18 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	58.82 %
Unclassified	root	N/A	41.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.18 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	38.24 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.18 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	23.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.18 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	2.94 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	1.96 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.18 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	2.94 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.96 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.18 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	2.94 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.96 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.18 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	2.94 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.96 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004479\|Ga0062595_100496242	Not Available	915	Open in IMG/M
3300005332\|Ga0066388_102685070	All Organisms → cellular organisms → Bacteria → Proteobacteria	908	Open in IMG/M
3300005363\|Ga0008090_10190006	All Organisms → cellular organisms → Bacteria	945	Open in IMG/M
3300005363\|Ga0008090_10195447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1137	Open in IMG/M
3300005363\|Ga0008090_15722516	Not Available	629	Open in IMG/M
3300005434\|Ga0070709_10053288	All Organisms → cellular organisms → Bacteria	2547	Open in IMG/M
3300005439\|Ga0070711_100184550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1599	Open in IMG/M
3300005542\|Ga0070732_10096084	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1743	Open in IMG/M
3300005764\|Ga0066903_100652624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1840	Open in IMG/M
3300005764\|Ga0066903_100715157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1769	Open in IMG/M
3300005764\|Ga0066903_106711898	Not Available	598	Open in IMG/M
3300005764\|Ga0066903_108855894	Not Available	511	Open in IMG/M
3300006028\|Ga0070717_10000590	All Organisms → cellular organisms → Bacteria → Proteobacteria	23217	Open in IMG/M
3300006755\|Ga0079222_10445109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	923	Open in IMG/M
3300006804\|Ga0079221_11390788	Not Available	557	Open in IMG/M
3300006806\|Ga0079220_10785567	Not Available	717	Open in IMG/M
3300006854\|Ga0075425_100261826	All Organisms → cellular organisms → Bacteria	1990	Open in IMG/M
3300006903\|Ga0075426_10488537	All Organisms → cellular organisms → Bacteria	914	Open in IMG/M
3300009826\|Ga0123355_10069808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	5646	Open in IMG/M
3300010046\|Ga0126384_10503263	All Organisms → cellular organisms → Bacteria → Proteobacteria	1045	Open in IMG/M
3300010047\|Ga0126382_11963811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	556	Open in IMG/M
3300010048\|Ga0126373_10477379	All Organisms → cellular organisms → Bacteria	1286	Open in IMG/M
3300010048\|Ga0126373_10839523	All Organisms → cellular organisms → Bacteria → Proteobacteria	981	Open in IMG/M
3300010048\|Ga0126373_11175222	Not Available	833	Open in IMG/M
3300010048\|Ga0126373_11659043	Not Available	703	Open in IMG/M
3300010049\|Ga0123356_10000345	All Organisms → cellular organisms → Bacteria → Proteobacteria	53562	Open in IMG/M
3300010049\|Ga0123356_12024603	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300010049\|Ga0123356_13847799	Not Available	518	Open in IMG/M
3300010359\|Ga0126376_10794054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	923	Open in IMG/M
3300010360\|Ga0126372_11981948	All Organisms → cellular organisms → Bacteria → Proteobacteria	629	Open in IMG/M
3300010366\|Ga0126379_10710023	All Organisms → cellular organisms → Bacteria	1100	Open in IMG/M
3300010373\|Ga0134128_11017641	All Organisms → cellular organisms → Bacteria → Proteobacteria	916	Open in IMG/M
3300010376\|Ga0126381_102223742	Not Available	788	Open in IMG/M
3300010376\|Ga0126381_104653893	Not Available	528	Open in IMG/M
3300010396\|Ga0134126_10386362	All Organisms → cellular organisms → Bacteria	1628	Open in IMG/M
3300012948\|Ga0126375_10225946	All Organisms → cellular organisms → Bacteria → Proteobacteria	1249	Open in IMG/M
3300012971\|Ga0126369_10085704	All Organisms → cellular organisms → Bacteria	2809	Open in IMG/M
3300016294\|Ga0182041_10248536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1446	Open in IMG/M
3300016294\|Ga0182041_11489562	Not Available	623	Open in IMG/M
3300016341\|Ga0182035_10317119	All Organisms → cellular organisms → Bacteria	1284	Open in IMG/M
3300016357\|Ga0182032_10129501	Not Available	1835	Open in IMG/M
3300016357\|Ga0182032_10316706	All Organisms → cellular organisms → Bacteria	1237	Open in IMG/M
3300016371\|Ga0182034_10630914	All Organisms → cellular organisms → Bacteria → Proteobacteria	906	Open in IMG/M
3300016404\|Ga0182037_10511856	All Organisms → cellular organisms → Bacteria → Proteobacteria	1008	Open in IMG/M
3300016445\|Ga0182038_10144543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1806	Open in IMG/M
3300017927\|Ga0187824_10056662	All Organisms → cellular organisms → Bacteria	1214	Open in IMG/M
3300017936\|Ga0187821_10441108	Not Available	539	Open in IMG/M
3300018060\|Ga0187765_10264139	All Organisms → cellular organisms → Bacteria → Proteobacteria	1019	Open in IMG/M
3300021361\|Ga0213872_10374842	Not Available	580	Open in IMG/M
3300021372\|Ga0213877_10050769	All Organisms → cellular organisms → Bacteria	1195	Open in IMG/M
3300021377\|Ga0213874_10196119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	724	Open in IMG/M
3300021441\|Ga0213871_10307364	Not Available	513	Open in IMG/M
3300021560\|Ga0126371_10249980	All Organisms → cellular organisms → Bacteria	1887	Open in IMG/M
3300021560\|Ga0126371_10256528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1864	Open in IMG/M
3300021560\|Ga0126371_10261141	Not Available	1849	Open in IMG/M
3300021560\|Ga0126371_10290752	All Organisms → cellular organisms → Bacteria → Proteobacteria	1759	Open in IMG/M
3300021560\|Ga0126371_10821983	All Organisms → cellular organisms → Bacteria	1075	Open in IMG/M
3300027842\|Ga0209580_10463610	Not Available	631	Open in IMG/M
3300027874\|Ga0209465_10133297	All Organisms → cellular organisms → Bacteria	1229	Open in IMG/M
3300031543\|Ga0318516_10068485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1964	Open in IMG/M
3300031543\|Ga0318516_10105966	Not Available	1592	Open in IMG/M
3300031543\|Ga0318516_10155351	Not Available	1315	Open in IMG/M
3300031543\|Ga0318516_10381595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	813	Open in IMG/M
3300031544\|Ga0318534_10271046	Not Available	978	Open in IMG/M
3300031544\|Ga0318534_10326735	Not Available	884	Open in IMG/M
3300031544\|Ga0318534_10579879	Not Available	638	Open in IMG/M
3300031545\|Ga0318541_10109657	All Organisms → cellular organisms → Bacteria → Proteobacteria	1489	Open in IMG/M
3300031561\|Ga0318528_10082880	Not Available	1666	Open in IMG/M
3300031640\|Ga0318555_10010565	All Organisms → cellular organisms → Bacteria → Proteobacteria	4045	Open in IMG/M
3300031668\|Ga0318542_10752320	Not Available	510	Open in IMG/M
3300031679\|Ga0318561_10036933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	2392	Open in IMG/M
3300031680\|Ga0318574_10330279	Not Available	888	Open in IMG/M
3300031681\|Ga0318572_10254824	All Organisms → cellular organisms → Bacteria → Proteobacteria	1032	Open in IMG/M
3300031681\|Ga0318572_10696248	Not Available	605	Open in IMG/M
3300031682\|Ga0318560_10013802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	3550	Open in IMG/M
3300031723\|Ga0318493_10904801	Not Available	500	Open in IMG/M
3300031747\|Ga0318502_10732192	Not Available	598	Open in IMG/M
3300031754\|Ga0307475_10026551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4145	Open in IMG/M
3300031769\|Ga0318526_10414859	Not Available	550	Open in IMG/M
3300031770\|Ga0318521_10186142	All Organisms → cellular organisms → Bacteria	1194	Open in IMG/M
3300031778\|Ga0318498_10053871	Not Available	1789	Open in IMG/M
3300031780\|Ga0318508_1236488	Not Available	524	Open in IMG/M
3300031782\|Ga0318552_10008322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4231	Open in IMG/M
3300031782\|Ga0318552_10195901	Not Available	1022	Open in IMG/M
3300031792\|Ga0318529_10106107	Not Available	1271	Open in IMG/M
3300031794\|Ga0318503_10266671	Not Available	556	Open in IMG/M
3300031798\|Ga0318523_10163327	All Organisms → cellular organisms → Bacteria	1109	Open in IMG/M
3300031799\|Ga0318565_10013053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3501	Open in IMG/M
3300031820\|Ga0307473_10126068	All Organisms → cellular organisms → Bacteria	1414	Open in IMG/M
3300031821\|Ga0318567_10025480	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2905	Open in IMG/M
3300031859\|Ga0318527_10069647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1408	Open in IMG/M
3300031897\|Ga0318520_10760849	Not Available	607	Open in IMG/M
3300031897\|Ga0318520_10872494	Not Available	566	Open in IMG/M
3300031912\|Ga0306921_10882887	Not Available	1016	Open in IMG/M
3300031941\|Ga0310912_11168663	Not Available	586	Open in IMG/M
3300031954\|Ga0306926_10915766	Not Available	1049	Open in IMG/M
3300032010\|Ga0318569_10252865	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	819	Open in IMG/M
3300032063\|Ga0318504_10562200	Not Available	547	Open in IMG/M
3300032180\|Ga0307471_100000607	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	18482	Open in IMG/M
3300032770\|Ga0335085_10157321	All Organisms → cellular organisms → Bacteria	2841	Open in IMG/M
3300033412\|Ga0310810_10568363	All Organisms → cellular organisms → Bacteria	1101	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.18%
Host-Associated	Host-Associated	8.82%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.22%
Plants	Host-Associated → Plants	4.90%
Arthropoda	Host-Associated → Arthropoda	3.92%
Aquatic	Environmental → Aquatic	1.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.22%
Digestive System	Host-Associated → Arthropoda → Digestive System	3.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.92%
Freshwater	Environmental → Aquatic → Freshwater	1.96%
Roots	Host-Associated → Plants → Roots	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	77.45%
Loam	Environmental → Terrestrial → Soil → Loam	8.82%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	3.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.92%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.94%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.96%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	47.06%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.53%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.88%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.92%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	3.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.92%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	2.94%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.94%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.96%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	34.31%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	17.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.88%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	3.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.94%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.94%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	2.94%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.96%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.96%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.96%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.96%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.98%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.98%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010049	Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3	Host-Associated	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300021361	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2	Host-Associated	Open in IMG/M
3300021372	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R01	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021441	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1	Host-Associated	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062595_1004962421	3300004479	Soil	MNAIVSSLYRDLTCAAAALIISMVIGASFVQSTATAPGSTTAMTSVARQA*
Ga0066388_1026850701	3300005332	Tropical Forest Soil	MNAIVATLFRDLTCAAAALVISMVVGASFVQSTSTVPGTLAAVEARQA*
Ga0008090_101900064	3300005363	Tropical Rainforest Soil	MNAFIAAAYRDLTCAAAAVLISIVVGTSFVQSTATAPGSHAVVTAQQT*
Ga0008090_101954474	3300005363	Tropical Rainforest Soil	MNAIIATLLRDLTCAAAAVLISIVVGTSFVQSTATAPGSHPAVIAQQA*
Ga0008090_157225163	3300005363	Tropical Rainforest Soil	MNAIVATLYRDLTCAAAALLISMVVGASFVQSTATAPGTPAAVTVPQA*
Ga0070709_100532886	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	SISQSKEIPMNAIVSSLYRDLTCAAAALIISMVIGASFVQSTATAPGSTTAMTSVARQA*
Ga0070711_1001845501	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MNAIVSSLYRDLTCAAAALLISMVIGASFVQSTATAPGSTAAMTSVARQA*
Ga0070732_100960845	3300005542	Surface Soil	MNAIVSSLYRDLTCAAAALLISVVIGASFVHSTAIAPGTYAAVSTAQATQA*
Ga0066903_1006526245	3300005764	Tropical Forest Soil	MNAIVSSLYRDLTCAAAAVLISMVIGASFVHSTATVPGTASAPAATALHA*
Ga0066903_1007151571	3300005764	Tropical Forest Soil	MNAIIATLLRDLTCAAAAVLISIVVGTSFVQSTATAPGSHAAVTAQQA*
Ga0066903_1067118981	3300005764	Tropical Forest Soil	MNAIVATMFRDLTCAAAALVISMVVGASFVQSTSTVPGTPAAVEARQA*
Ga0066903_1088558942	3300005764	Tropical Forest Soil	MNAIIATLFRDVTCAAAALVISLVVGASFVQSTSTAPGTPAAVVARQA*
Ga0070717_1000059021	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MNAIVSSLYRDLTCAAAALLISMAIGASFVQSTATARGSTTAMTSVARQA*
Ga0079222_104451094	3300006755	Agricultural Soil	MNAIVSSLYRDLTCAAAALLISVVIGASFVQSTASAPGTATAVVSAPHQA*
Ga0079221_113907881	3300006804	Agricultural Soil	AAALLISLVIGASFVQSTATAPGSTTAMTSVARQA*
Ga0079220_107855671	3300006806	Agricultural Soil	MNAIVSSLYRDLTCAAAALLISLVIGASFVQSTATAPGSTTAMTSVARQA*
Ga0075425_1002618265	3300006854	Populus Rhizosphere	MNAIVSSLYRDLTCAAAALLISVVIGASFVQSTASAPGTATAVVSTPHQA*
Ga0075426_104885371	3300006903	Populus Rhizosphere	SLYRDLTCAAAALLISVVIGASFVQSTASAPGTATAVVSTPHQA*
Ga0123355_100698082	3300009826	Termite Gut	MTMNAFASAWYRDLTCAAAALLISVIVGASFVQSTASAPGVQTVAVATQQS*
Ga0126384_105032632	3300010046	Tropical Forest Soil	MNAIVATLFRDLTCAAAALVISMVVGASFVQSTSTVPGTPAAVEARQA*
Ga0126382_119638113	3300010047	Tropical Forest Soil	LYRDLTCAAAAVLISMVIGASFVHSTATVTGIASVPAAAALHA*
Ga0126373_104773791	3300010048	Tropical Forest Soil	MNAFISTMYRDLTCAAAAVLISFIVSMSFVQSTATAPASHAGVTTTASQA*
Ga0126373_108395232	3300010048	Tropical Forest Soil	MNAFVSTLYRDLTCAAAALLISVIVGASFVQSTATVAGEPSVIAATSRST*
Ga0126373_111752222	3300010048	Tropical Forest Soil	MNAIAATLIRDLTCAVAAVLISMVVSASFVQSTATAPGTHAPAAMTAQQV*
Ga0126373_116590432	3300010048	Tropical Forest Soil	MNAIVATLFRDLTCAAAALVISMVVGASFVQSTSTAPGTPAAVESRQA*
Ga0123356_1000034549	3300010049	Termite Gut	MTMNAFASALYRDLTCAAAALLISVIVGASFVQSTASAPGVHTVAVATQQS*
Ga0123356_120246031	3300010049	Termite Gut	TCAAAAMLISLVVGMSFVQSTATAPGAHTPSAAVVQQY*
Ga0123356_138477992	3300010049	Termite Gut	MNAFVTTLYRDLTCAAAALVISLIVAGSFLQSTSTAPSASAVTTTAQARQV*
Ga0126376_107940541	3300010359	Tropical Forest Soil	AIVATLFRDLTSAAAALVISMVVGASFVQSTSTVPGTLAAVEARQA*
Ga0126372_119819482	3300010360	Tropical Forest Soil	MNAIVSSMYRDLTCAVAAMLISLVIGASFVQSTATAPTSAAAATA
Ga0126379_107100231	3300010366	Tropical Forest Soil	MNAIVATLFRDLTCAAAALVISMVVGASFVQSTSSVPGTPAAVQARQA*
Ga0134128_110176412	3300010373	Terrestrial Soil	MNAIVSSLYRDLTCAAAALIISMVIGASFVQSTATAPGSTTAVTSVARQA*
Ga0126381_1022237421	3300010376	Tropical Forest Soil	MNTFVSTFYRDLTCAAAALLISVIVGASFVQSTATVAGEPSVIAASRSA*
Ga0126381_1046538932	3300010376	Tropical Forest Soil	MNAFISTLYRDLTCAAAAVLISVIVSMSFVQSTATAPGSHAEVTARASQA*
Ga0134126_103863622	3300010396	Terrestrial Soil	MSAIVSSLYRDLTCAAAALIISMVIGASFVQSTATAPGSTTAVTSVARQA*
Ga0126375_102259462	3300012948	Tropical Forest Soil	MNAIVSSLYRDLTCAAAAVLISMVIGASFVHSTATAPGVHAQVATARTANA*
Ga0126369_100857042	3300012971	Tropical Forest Soil	MNAIVATLFRDLTCAAAALVISMVVGASFVQSTSTVPGTPAAVEVRQA*
Ga0182041_102485361	3300016294	Soil	IIATLLRDLTCAAAAVLISFVVGTSFVQSTATAPGTHAAVTAQQA
Ga0182041_114895621	3300016294	Soil	MNAIIATLLRDLTCAAAAVLISFVVGTSFVQSTATAPSSHAAVTAQQA
Ga0182035_103171194	3300016341	Soil	MNAIIATLLRDLTCAAAAVLISIVVGTSFVQSTATAPSSHAALTAQQA
Ga0182032_101295012	3300016357	Soil	MNAIIATLLRDLTCAAAAVLISFVVGTSFVQSTATAPGTPAAVTAQQA
Ga0182032_103167065	3300016357	Soil	NVIISTLYRDLTCAAAALLISVVIGASFVQSTATAPGGHAAVTTMAARQA
Ga0182034_106309142	3300016371	Soil	MNAIVSSLYRNLTCAAAALVISLVIGASFVQSTATASGTYAAVPTVQATQA
Ga0182037_105118562	3300016404	Soil	MNAIVATLLRDLTCASAAVLISFVVGTSFVQSTATAPGTHAAVTAQQA
Ga0182038_101445431	3300016445	Soil	MNVIISSLYRDLTCAAAALLISVVIGASFVQSTATAPGGHAAVTTMAARQA
Ga0187824_100566621	3300017927	Freshwater Sediment	SKEIPMNAIASSLYRDLTCAAAALLISMVIGASFVQSTATAPGSTAAMTSVARQA
Ga0187821_104411081	3300017936	Freshwater Sediment	MNAIISSLYRDLTCAAAALLISVIIGASFVQSTATAPGTVHAPAAVRQA
Ga0187783_100216833	3300017970	Tropical Peatland	MNAFVSALYRDVTCAAAAILITLIVGASFVQSTAVAPGVTAASPAVSHSERA
Ga0187765_102641392	3300018060	Tropical Peatland	MNAIVNVLFRDLTCAAAALVISFVVGASFVQSTATAPGTPTAVVARQA
Ga0213872_103748421	3300021361	Rhizosphere	VSSLYRDLTCAAAALLISLIVGASFVQSTANVPASLAAVPTVQLPQA
Ga0213877_100507691	3300021372	Bulk Soil	MNAIVSSLYRDLTCAAAALLISLVVGASFVQSTANVRASLAAVPTVQLPQA
Ga0213874_101961193	3300021377	Plant Roots	MSAIVSSLYRDLTCAAAALLISMVIGASFVQSTATPPGSVRVLTSAQQA
Ga0213871_103073641	3300021441	Rhizosphere	MNAIVSSLYRDLTCAAAALLISLVVGASFVQSTANVPASLAAVPTVQLPQA
Ga0126371_102499802	3300021560	Tropical Forest Soil	MNAFVSTLYRDLTCAAAALLISVIVGASFVQSTATVSAGHPSVSVAASRSA
Ga0126371_102565282	3300021560	Tropical Forest Soil	MNAIVATLFRDLTCAAAALVISMVVGASFVQSTSTVPGTPAAVEARQA
Ga0126371_102611411	3300021560	Tropical Forest Soil	MNAFVSTLYRDLSCAAAALLISVIVGASFVQSTATVAGEPSVIAATSRSA
Ga0126371_102907524	3300021560	Tropical Forest Soil	MNAIVATLFRDLTCAAAALVISMVLGASFVQSTSTVPGTPAAVEVRQA
Ga0126371_108219831	3300021560	Tropical Forest Soil	MNAIVSSLYRDLTCAVAAMLISLVIGASFVQSTATAPTSATAVTARQA
Ga0209580_104636103	3300027842	Surface Soil	MNAIVSSLYRDLTCAAAALLISVVIGASFVHSTAIAPGTYAAVSTAQATQA
Ga0209465_101332974	3300027874	Tropical Forest Soil	MNAIVSSLYRDLTCAAAAMLISMVIGASFVHSTATVPGTASAPAATALHA
Ga0318516_100684855	3300031543	Soil	MNAIIATLLRDLTCAAAAVLISFVVGTSFVQSTATAPGTHAAVTAQQA
Ga0318516_101059664	3300031543	Soil	MNAIISSLYRDLTCAAAALLISVVIGASFVQSTATAPGGHAAVTTMAARQA
Ga0318516_101553512	3300031543	Soil	MNAIVSSLYRDLTCAAAALVISLVIGASFVQSTATYAAVPTAQATQA
Ga0318516_103815953	3300031543	Soil	MNAIVATLYRDLTCAAAALVISYVVGASFVQSTATAPGTPAAVTAQQA
Ga0318534_102710461	3300031544	Soil	MNAIIATLLRDLTCAAAAVLISIVVGTSFVQSTATAPSSHAAVTAQQA
Ga0318534_103267353	3300031544	Soil	MNAIVSSLYRDLTCAAAALLISLVIGASFVQSTATPPGTASAVTARQA
Ga0318534_105798791	3300031544	Soil	MNAIVSTLYRDLTCAAAALLISVIVGASFVQSTATAPGPYAAVTASATQRA
Ga0318541_101096574	3300031545	Soil	MNAIIATLLRDLTCASAAVLISFVVGTSFVQSTATAPGTHAAVTAQQA
Ga0318528_100828803	3300031561	Soil	MNAFALTMFRHLTCVAAAVLISVVIGASFVQSTATAPGGHAAVTTMAARQA
Ga0318555_100105653	3300031640	Soil	MNAIVSSLYRDLTCAAAALVISLVIGASFVQSTATASGNYAAVPTAQATQA
Ga0318542_107523201	3300031668	Soil	LYRDLTCAAAALLISVVIGASFVQSTATAPGGHAAVTTMAARQA
Ga0318561_100369333	3300031679	Soil	MNAIISSLYRDLTCAAAALLISVVIGASFVQSTATAPGGHAAVTTM
Ga0318574_103302791	3300031680	Soil	MNAIISSLYRDLTCAAAALLISVVIGASFVQSTATAPGGHEAVTTMAARQA
Ga0318572_102548241	3300031681	Soil	MNAIVATLYRDLTCAAAALVISFIVGASFVQSTATAPATTAATA
Ga0318572_106962481	3300031681	Soil	MNAFVSTLYRDLTCAAAALLISVIVGASFVQSTATVAGEPSVIAATSRSA
Ga0318560_100138021	3300031682	Soil	MNAIVSSLYRDLTCAAAALLISLVIGASFVQSTATPPGTASAVPARQA
Ga0318493_109048013	3300031723	Soil	TLYRDLTCAAAALVISYVVGASFVQSTATAPGTPAAVTAQQA
Ga0318502_107321923	3300031747	Soil	RDLTCAAAALLISVVIGASFVQSTATAPGGHAAVTTMAARQA
Ga0307475_100265516	3300031754	Hardwood Forest Soil	MNAIVATLFRDLTCAAAALVISIVVGASFVQSTATAPGTPAAVTRQA
Ga0318526_104148591	3300031769	Soil	MNAIIATLFRDLTCAAAALVISVIVGASFVQSTANAPGAPTTVAARQA
Ga0318521_101861421	3300031770	Soil	RDLTCASAAVLISFVVGTSFVQSTATAPGTHAAVTAQQA
Ga0318498_100538711	3300031778	Soil	MNAIVATLYRDLTCAAAALVISFIVGASFVQSTATAPATTAAT
Ga0318508_12364882	3300031780	Soil	MNVIISTLYRDLTCAAAALLISVVIGASFVQSTATAPGGHAAVTTMAARQA
Ga0318552_100083227	3300031782	Soil	RKEIAMNAIVSSLYRNLTCAAAALVISLVIGASFVQSTATASGTYAAVPTVQATQA
Ga0318552_101959011	3300031782	Soil	MNAIVSSLYRNLTCAAAALVISLVIGASFVQSTATASGTYAAVPTAQATQ
Ga0318529_101061072	3300031792	Soil	MNVIISTLYRDLTCAAAALVISYVVGASFVQSTATAPGTPAAVTAQQA
Ga0318503_102666711	3300031794	Soil	PAMNAIIATLLRDLTCAAAAVLISFVVGTSFVQSTATAPGTPAAVTAQQA
Ga0318523_101633271	3300031798	Soil	TLLRDLTCASAAVLISFVVGTSFVQSTATAPGTHAAVTAQQA
Ga0318565_100130536	3300031799	Soil	MNAIVSSLYRNLTCAAAALEISLVIGASFVQSTATYAAVPTAQATQA
Ga0307473_101260682	3300031820	Hardwood Forest Soil	MNDFVSSLYRDLTCAAAALLISMVIGASFVQSTATAPGNPSAPAATVLRA
Ga0318567_100254806	3300031821	Soil	MNAIIATLLRDLTCAAAAVLISIVVGTSFVQSTATAPGSHAAVTAQQA
Ga0318527_100696471	3300031859	Soil	YRDLTCAAAALVISYVVGASFVQSTATAPGTPAAVTAQQA
Ga0318520_107608491	3300031897	Soil	MNAIVSSLYRDLTCAAAALVISLVIGASFVQSTATASGTYAAVPTVQATQA
Ga0318520_108724941	3300031897	Soil	MNAIVSSLYRDLTCAAAALVISVVIGGSFVQSTATAPGTYAAVPTAQATKA
Ga0306921_108828871	3300031912	Soil	MNAIVSSLYRDLTCAAAALLISLVIGASFVQSTATPPGTASAVPA
Ga0310912_111686633	3300031941	Soil	NPQETAMNAIISSLYRDLTCAAAALLISVVIGASFVQSTATAPGGHAAVTTMAARQA
Ga0306926_109157663	3300031954	Soil	MSAIVSSLYRDLTCAAAALLISLVIGASFVQSTATPPGTASAVPARQA
Ga0318569_102528651	3300032010	Soil	NTPKRPDPLKELAMNAIVATLYRDLTCAAAALVISYVVGASFVQSTATAPGTPAAVTAQQ
Ga0318504_105622003	3300032063	Soil	PMNAIVSSLYRDLTCAAAALLISLVIGASFVQSTATPPGTASAVPARQA
Ga0307471_1000006073	3300032180	Hardwood Forest Soil	MNDFVSSLYRDLTCAAAALLISMVIGASFVQSTATARGNPSAPAATVLRA
Ga0335085_101573214	3300032770	Soil	MNPIVYSLYRDLTCAAAALLISMVIGASFVQSTATAPGSTAAMTSLARQA
Ga0310810_105683631	3300033412	Soil	KEIPMNAIVSSLYRDLTCAAAALIISMVIGASFVQSTATAPGSTTAVTSVARQA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F100919

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences