Metagenome / Metatranscriptome Family F100900

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F100900
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	90 residues
Representative Sequence	MKIRFTKAPTFTKAIIASAVFAIAYLASTSNLPSCSDTVAILSSGGECIERQSFLHTASGWLALICLFAAVLLLALKHKDSILGWQASI
Number of Associated Samples	88
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	67.65 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	91.18 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (91.176 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (25.490 % of family members)
Environment Ontology (ENVO)	Unclassified (15.686 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 58.97% β-sheet: 0.00% Coil/Unstructured: 41.03%
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Predicted 3D Structure

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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF00196	GerE	82.35
PF13424	TPR_12	11.76
PF00211	Guanylate_cyc	0.98
PF01810	LysE	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.18 %
Unclassified	root	N/A	8.82 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.18 %
Unclassified	root	N/A	8.82 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.18 %
Unclassified	root	N/A	8.82 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	78.43 %
Unclassified	root	N/A	8.82 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	78.43 %
Unclassified	root	N/A	8.82 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	78.43 %
Unclassified	root	N/A	8.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	8.82 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	8.82 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001867\|JGI12627J18819_10464891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	518	Open in IMG/M
3300002914\|JGI25617J43924_10285962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	565	Open in IMG/M
3300004080\|Ga0062385_10904358	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	586	Open in IMG/M
3300004092\|Ga0062389_104847502	Not Available	507	Open in IMG/M
3300005435\|Ga0070714_100416289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1272	Open in IMG/M
3300005436\|Ga0070713_100420958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1250	Open in IMG/M
3300005436\|Ga0070713_102439880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	505	Open in IMG/M
3300005526\|Ga0073909_10541423	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	568	Open in IMG/M
3300005541\|Ga0070733_10737377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	661	Open in IMG/M
3300005602\|Ga0070762_10495039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	800	Open in IMG/M
3300005610\|Ga0070763_10070528	All Organisms → cellular organisms → Bacteria	1708	Open in IMG/M
3300006028\|Ga0070717_11930970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	532	Open in IMG/M
3300006028\|Ga0070717_11937436	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	531	Open in IMG/M
3300006050\|Ga0075028_101070431	Not Available	505	Open in IMG/M
3300006052\|Ga0075029_100584604	Not Available	745	Open in IMG/M
3300006755\|Ga0079222_11471206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	636	Open in IMG/M
3300006804\|Ga0079221_11799462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	501	Open in IMG/M
3300009174\|Ga0105241_11480408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	653	Open in IMG/M
3300009519\|Ga0116108_1049660	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1333	Open in IMG/M
3300009522\|Ga0116218_1047272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1947	Open in IMG/M
3300009523\|Ga0116221_1107499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1230	Open in IMG/M
3300009523\|Ga0116221_1301725	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	693	Open in IMG/M
3300009665\|Ga0116135_1350996	Not Available	591	Open in IMG/M
3300009665\|Ga0116135_1368773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	578	Open in IMG/M
3300010373\|Ga0134128_11121559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	868	Open in IMG/M
3300010373\|Ga0134128_11143928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	859	Open in IMG/M
3300010376\|Ga0126381_101155425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1119	Open in IMG/M
3300012685\|Ga0137397_10473430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	933	Open in IMG/M
3300012944\|Ga0137410_10105573	All Organisms → cellular organisms → Bacteria	2094	Open in IMG/M
3300014201\|Ga0181537_10327751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1051	Open in IMG/M
3300014499\|Ga0182012_10568083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	731	Open in IMG/M
3300014501\|Ga0182024_10616785	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1355	Open in IMG/M
3300014501\|Ga0182024_10862009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1096	Open in IMG/M
3300016387\|Ga0182040_11744644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	532	Open in IMG/M
3300017823\|Ga0187818_10088555	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1337	Open in IMG/M
3300017924\|Ga0187820_1158670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	685	Open in IMG/M
3300017932\|Ga0187814_10261902	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	657	Open in IMG/M
3300017942\|Ga0187808_10432092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	604	Open in IMG/M
3300017966\|Ga0187776_10194243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1273	Open in IMG/M
3300018037\|Ga0187883_10368065	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	735	Open in IMG/M
3300020150\|Ga0187768_1113398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	620	Open in IMG/M
3300020582\|Ga0210395_10163085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1666	Open in IMG/M
3300020582\|Ga0210395_11309891	Not Available	530	Open in IMG/M
3300021170\|Ga0210400_11641895	Not Available	506	Open in IMG/M
3300021171\|Ga0210405_10721830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	768	Open in IMG/M
3300021178\|Ga0210408_11169067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	589	Open in IMG/M
3300021401\|Ga0210393_10132968	All Organisms → cellular organisms → Bacteria	1994	Open in IMG/M
3300021401\|Ga0210393_11338694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	573	Open in IMG/M
3300021402\|Ga0210385_10205503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1433	Open in IMG/M
3300021403\|Ga0210397_11152340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	603	Open in IMG/M
3300021406\|Ga0210386_10127762	All Organisms → cellular organisms → Bacteria	2107	Open in IMG/M
3300021406\|Ga0210386_11307241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	610	Open in IMG/M
3300021406\|Ga0210386_11378358	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	591	Open in IMG/M
3300021407\|Ga0210383_10538568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1008	Open in IMG/M
3300021474\|Ga0210390_11253992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	596	Open in IMG/M
3300021478\|Ga0210402_11737532	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	550	Open in IMG/M
3300022557\|Ga0212123_10722632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	610	Open in IMG/M
3300025905\|Ga0207685_10028870	All Organisms → cellular organisms → Bacteria	1958	Open in IMG/M
3300025928\|Ga0207700_11495079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	599	Open in IMG/M
3300025929\|Ga0207664_10270588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1488	Open in IMG/M
3300025929\|Ga0207664_10532506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1053	Open in IMG/M
3300026374\|Ga0257146_1028296	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	910	Open in IMG/M
3300026475\|Ga0257147_1071831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	530	Open in IMG/M
3300026551\|Ga0209648_10143191	Not Available	1898	Open in IMG/M
3300027090\|Ga0208604_1024463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	571	Open in IMG/M
3300027096\|Ga0208099_1002632	All Organisms → cellular organisms → Bacteria	2072	Open in IMG/M
3300027857\|Ga0209166_10627446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	545	Open in IMG/M
3300027879\|Ga0209169_10010932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5072	Open in IMG/M
3300028906\|Ga0308309_10517849	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1032	Open in IMG/M
3300029882\|Ga0311368_11051139	Not Available	533	Open in IMG/M
3300030013\|Ga0302178_10156876	Not Available	1124	Open in IMG/M
3300030520\|Ga0311372_10441724	All Organisms → cellular organisms → Bacteria	1945	Open in IMG/M
3300030520\|Ga0311372_11560978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	808	Open in IMG/M
3300030617\|Ga0311356_10391395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1374	Open in IMG/M
3300030618\|Ga0311354_11324910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	645	Open in IMG/M
3300030815\|Ga0265746_1040695	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	624	Open in IMG/M
3300030906\|Ga0302314_10283364	All Organisms → cellular organisms → Bacteria	1933	Open in IMG/M
3300031231\|Ga0170824_101971975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	543	Open in IMG/M
3300031236\|Ga0302324_100212999	All Organisms → cellular organisms → Bacteria	3066	Open in IMG/M
3300031524\|Ga0302320_11989715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	545	Open in IMG/M
3300031525\|Ga0302326_10174833	All Organisms → cellular organisms → Bacteria	3641	Open in IMG/M
3300031525\|Ga0302326_12729769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	612	Open in IMG/M
3300031668\|Ga0318542_10601909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	573	Open in IMG/M
3300031681\|Ga0318572_10835300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	547	Open in IMG/M
3300031708\|Ga0310686_111378522	All Organisms → cellular organisms → Bacteria	2248	Open in IMG/M
3300031715\|Ga0307476_10280439	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1220	Open in IMG/M
3300031715\|Ga0307476_10956317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	631	Open in IMG/M
3300031799\|Ga0318565_10474210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	605	Open in IMG/M
3300031896\|Ga0318551_10512886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	688	Open in IMG/M
3300031945\|Ga0310913_11079975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	561	Open in IMG/M
3300032008\|Ga0318562_10664425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	600	Open in IMG/M
3300032025\|Ga0318507_10401507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	597	Open in IMG/M
3300032067\|Ga0318524_10534747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	616	Open in IMG/M
3300032076\|Ga0306924_10777100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1070	Open in IMG/M
3300032174\|Ga0307470_11534057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	555	Open in IMG/M
3300032261\|Ga0306920_101172889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1111	Open in IMG/M
3300032770\|Ga0335085_10785929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1049	Open in IMG/M
3300032782\|Ga0335082_10096608	All Organisms → cellular organisms → Bacteria	2936	Open in IMG/M
3300032828\|Ga0335080_12004534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	560	Open in IMG/M
3300032897\|Ga0335071_10512853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1151	Open in IMG/M
3300033290\|Ga0318519_10936839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	536	Open in IMG/M
3300034124\|Ga0370483_0001726	All Organisms → cellular organisms → Bacteria	6015	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.02%
Host-Associated	Host-Associated	0.98%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.29%
Aquatic	Environmental → Aquatic	13.73%
Plants	Host-Associated → Plants	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	74.51%
Freshwater	Environmental → Aquatic → Freshwater	10.78%
Peat	Environmental → Terrestrial → Peat	10.78%
Sediment	Environmental → Aquatic → Sediment	1.96%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	49.02%
Loam	Environmental → Terrestrial → Soil → Loam	15.69%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.78%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	10.78%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.96%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	32.35%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.75%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	10.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.82%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.86%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.86%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.92%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.92%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.94%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.96%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.96%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.96%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.49%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	9.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.88%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.92%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.92%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.92%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.94%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.94%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.94%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.94%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.96%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.96%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.96%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.96%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.96%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.96%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.98%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.98%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.98%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.98%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.98%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.98%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300020150	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MG	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026374	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-A	Environmental	Open in IMG/M
3300026475	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-A	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027090	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF016 (SPAdes)	Environmental	Open in IMG/M
3300027096	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF043 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030013	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_3	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030815	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030906	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12627J18819_104648911	3300001867	Forest Soil	MKLKFTKAPTFTKAIIASAVFAIAYLASTSNLPSCNDTVAIFSSGGECIERQSFLHTASGWLALICLVAAVLLLALKHKN
JGI25617J43924_102859622	3300002914	Grasslands Soil	MKIRFSKAPTFTKAIIASAVFAIAYLASTSSLPSCSDTVAILSSGGECIERQSFLHTASGWLALICLVAAVALLALKHKNSILGWQ
Ga0062385_109043581	3300004080	Bog Forest Soil	MKLTFSKAPTFTKAIIASAVFAIAYLASTSNLPSCSDTAAVLTSGGECIERQSFLHTASGWLALICLLAAVLLLALKHKNSILGWQASIQQAHQDPPAQAQPQAPGRPSGF
Ga0062389_1048475021	3300004092	Bog Forest Soil	MKIKFTKAPTFTKAIIASAVFTIAYLASTSNLPPCSDTALILSSGGECIQRQSFLHTGSGWLALICLVAAVVLLVLKHKDSILGARASLQQTGQGPSAQA
Ga0070714_1004162892	3300005435	Agricultural Soil	MKIRFSKAPTSTKAIIASAVFTIIYLASASSLPPCSDTVAVLNSGACVVRQSFLHTASGWLALICLVVAVLLLALKHKDSIS
Ga0070713_1004209582	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MKIRFSKAPTSTKAIIASAVFTIIYLASASSLPPCSDTVAVLNSGACVVRQSFLHTASGWLALICLVVAVLLLALKHKDSISG
Ga0070713_1024398801	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MKIRFSKAPTSTKAIIASAVFTIVYLASASSLPPCSDTVAVLNSGACVVRQSFLHTASGWLALICLVVAVLLLALKHKDSISGRQAP
Ga0073909_105414232	3300005526	Surface Soil	MKIRFSKAPTFTKAIIASAVFAIAYLASTSSLPSCSDTVAVLNSGECIERQSFLHTASGWLALICLVAAVLL
Ga0070733_107373772	3300005541	Surface Soil	MKIKFTKTPTFTKAIIASAVFAIAYLASTSNLPSCSDTVAILSSGGECIERQSFLHTASGWLSLIGLLAAVVLLAL
Ga0070762_104950392	3300005602	Soil	MKLKFTKAPTFTKAIIASAVFAIAYLASTSSLPSCSDTVAAFSSGECIERQSFLHTASGWLALICLVAAV
Ga0070763_100705282	3300005610	Soil	MKTTFTKAPTFTKAIIASAVFAIAYLASTSSLPSCSDTAAVLSSGSGECLERPSLLHTASGWLALICLLAAVLLLALKHKDAIL
Ga0070717_119309702	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MKIRFSKAPTSTKAIIASAVFTIVYLASASSLPPCSDTVAVLNSGACVVRQSFLHTASGWLALICLVVAVLLLALK
Ga0070717_119374362	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MKIRFSKAPTSTKAIIASAVFTIIYLASASSLPPCSDTVAVLNSGACVVRQSFLHTASGWLALICLVVAVLLLALK
Ga0075028_1010704312	3300006050	Watersheds	MKLNFTKAPTFTKAIIASAVFAIAYLASTSNLPSCSDTVAILSSGGECIERQSFLHTASGWLALICLAAAVLLLALKHKNSILGWQASIQQAHQGPQAPAPA
Ga0075029_1005846041	3300006052	Watersheds	MKIKFTKAPTFTKAIIASAVFAIAYLASTSNLPSCSDTVAILSSGGECIERQSFLHTASGWLALICLVAAVLLFALKHKNSILGWQASIQQAHQGPSAQAQAQAQAQ
Ga0079222_114712062	3300006755	Agricultural Soil	MKIKFSKAPTSTKAIIASAVFTIVYLASASSLPPCTDTVAVLNSGACVVRQSFLHTASGWLALICLVVAVLLLALKHKDS
Ga0079221_117994621	3300006804	Agricultural Soil	MKIKFSKAPTSTKAIIASAVFTIVYLASASSLPPCTDTVAVLNSGACVVRQSFLHTASGWLALICLVVAVLLLALKHKDSI
Ga0105241_114804082	3300009174	Corn Rhizosphere	MKIKSSKAPPFTKAIIASAVFAIAYLASTSSLPSCSDTVAVLNSGECIERQSLLHTASGWLALICLVAAVLLLALKHKNSILGWQASIQQAHQQPSAQAEAQ
Ga0116108_10496601	3300009519	Peatland	MKIRFTKAPTFTKAIIASAVFAIAYLATTSNLPSCSATAAVLSSGGECIERQSFLHTAAGWLALICLVAAV
Ga0116218_10472722	3300009522	Peatlands Soil	MKITFTKTPTFTKAIIASAVFAIAYLASTSNLPSCSDTVAIFNSGGECIERQSFLHTASGWLALTCVVAAVVLLALKHKNSILGWQASIQQAHQGPSAQAQEQAQAQ
Ga0116221_11074991	3300009523	Peatlands Soil	MKITFTKAPTFTKAIIASAVFTLVYLASTSNLPSCSDTIAVINSGECIERQSFLHTASGWLALICLVAAVLMLALKHKNAILAQWASVQQARQ
Ga0116221_13017252	3300009523	Peatlands Soil	MKITFTKAPTFTKAIIASAVFAIAYLASTSNLPSCSDTVALLNSGGECIERQSFLHTASGWLALICLLAAVVLLALKHKNSI
Ga0116135_13509962	3300009665	Peatland	MKLTFSKAPTFTKAIIASAVFAIAYLASTSNLPSCSDTAAVLTSGGECIERQSFLHTASGWLALICLVAAVLLLALKHKNSILGLQASVQQARQGPSAQAQAQAQA
Ga0116135_13687731	3300009665	Peatland	MKIRFTKAPTFTKAIIASAVFAIAYLASTSNLPSCSDTAAILSSGGDCIERQSFLHTASGWLALICLVAAVLLLA
Ga0134128_111215593	3300010373	Terrestrial Soil	MKIKFSKAPTFTKAIIASAVFAIAYLASTSSLPSCSDTVAVLNSGECIERQSFLHTASGWLALICLVAALLLLALKHKNSILGWQASIQQAHQGPSAQAQAQ
Ga0134128_111439282	3300010373	Terrestrial Soil	MKIRFSKAPTSTKAIIASAVFTIVYLASASSLPPCTDTVAALNSGGCVVRQSFLHTASGWLALICLVTAVLLFALKHKDSISGRQAAAPVPVPDR
Ga0126381_1011554251	3300010376	Tropical Forest Soil	MKIQFTKAPTFTKAIIASAIFTIAYLASTSNLPPCSDTVAILNSGGECIERQSFLHTASGWLALICLVAAALLLAVKHKNSILGLQASVQQAR
Ga0137397_104734302	3300012685	Vadose Zone Soil	MKIKFSKAPTFTKAIIASAVFAIAYLASTSSLPSCSDTVAVLNSGECIERQSFLHTASGWLALICLVAAVLLLALKHKNSILGWQASIQQAHQEPSAQAQA
Ga0137410_101055732	3300012944	Vadose Zone Soil	MKIKFSKAPTFTKAIIASAVFAIAYLASTSSLPSCSDTVAVLNSGECIERQSFLHTASGWLALICLVAAVLLLALKHKNSILGWQASIQQAHQEPSA
Ga0181537_103277512	3300014201	Bog	MKLTFSKAPTFTKAITASAVFTIAYLASTSNLPSCSDTVAILSSGECIERQSLLHTASGWLALICLV
Ga0182012_105680831	3300014499	Bog	MKIRFTKAPTFTKAIIASAVFAIAYLASTSNLPSCSDTVAILSSGGECIERQSFLHTASGWLALICLFAAVLLLALKHKDSILGWQASIRQVHQGPSAQPQAPAQPQAPAQAQVPAPVPG
Ga0182024_106167852	3300014501	Permafrost	MKIKLTKAPTFTKAITASAVFAIAYLASTSNLPSCSDTAAVLSSGGECIERQSFLHTASGWLALICLVAAVLLL
Ga0182024_108620092	3300014501	Permafrost	MKRIKFTKAPTFTKAIIASAIFAIAYLASTSNLPPCSDPDVLLNGGECIERQSFLHTASGWLALVCLIAAVLLLVLKHKDAILGRVTPAQPGYHGPSATANVPAQQAYQGPSAQAQALA
Ga0182040_117446442	3300016387	Soil	MKIRFSKAPTFTKAIIASAVFAIAYLASTSSLPSCSDAVAILNSGGECIERQSFLHTASGWLALICLVAAVLLL
Ga0187818_100885552	3300017823	Freshwater Sediment	MKITFTKAPTFTKAIIASAVFAIAYLASTSNLPSCSDTVAILSSGGECIERQSYLHTASGWLALICLVAALLLLALKHK
Ga0187820_11586701	3300017924	Freshwater Sediment	MKITFTKTPTFTKAIIASAVFAIAYLASTSNLPSCSDTVAILSSGGECIERQSYLHTASGWLALICLVAALLLLALKHKNSILGWQASIQQVHQGPSAQAQAPAPAQAQVPERA
Ga0187814_102619022	3300017932	Freshwater Sediment	MKIKFTKAPTFTKAIIASAVFAIAYLASTSNLPSCSDTVAILSSGGECIERQSYLHTASGWLALICLVAALLLLALKHKNSILGWQASIQQVHQGPSAQAQAPAPAQAQ
Ga0187808_104320922	3300017942	Freshwater Sediment	MKIRFTKAPTFTKGIIAAAVFAIIYLATTSNLPSCSDTVAVLSSGGECIERQSFLHTASGWLALICLVAAVVLLALKHKDSILGLRASVQQAHQGPPTSPPQQQAD
Ga0187776_101942432	3300017966	Tropical Peatland	MKIRFTKAPTFTKAIIASAVFAIAYLASTSNLPSCSDTVAILSSGGECIERQSYLHTASGWLALICLAAAVLLLGRDGSPG
Ga0187883_103680651	3300018037	Peatland	MKIRFTKAPTFTKAIIASAVFTIAYLASTSNLPSCSDTAAILSSGGECIERQSFLHTASGWLALIGLVAAVLLLALKHKDAILGWQASLRQVPQEPSAQSPAQAPGQP
Ga0187768_11133982	3300020150	Tropical Peatland	MKIKLTKAPTFTKAIIASAVFAITYLASTSNLPSCSDTVAILSSGGECIERQSYLHTASGWLALICLVAALLLLALKHKNSILGW
Ga0210395_101630852	3300020582	Soil	MKLKFTKTPTFTKAIIASAVFAIVYLASTSNLPSCSDTVAVFSSGECIERQSFLHTASGWLSLICLVAAVVLLVLKHKDSILGWQASLQQAHQGPPAQG
Ga0210395_113098911	3300020582	Soil	MNIRFTRAPTFTKAIIASAVFAIAYLASGSNLPSCNDTVAILSSGGECIERQSFLHTASGWLALICLVAAVLLLA
Ga0210400_116418951	3300021170	Soil	MKIRFTKAPTFTKAIIATAVFTITYLASTSNLPSCSDTVAVLNSGGECIERQSFLHTASGWLALICLIVAVLLLALKHKDSILGQVRQARQGLSAQAQVSA
Ga0210405_107218301	3300021171	Soil	MKINFTKTPTFTKAIIASAIFAIAYLASTSNLPSCSDTVAVLSSGGECIERQSFLHTASGWLALICLVAAVLLLALKHKDSILGWQASLRQAHQG
Ga0210408_111690671	3300021178	Soil	MKINFTKTPTFTKAIIASAIFAIAYLASTSNLPSCSDTVAVLSSGGECIERQSFLHTASGWLALICLVAAVLLLALKHKDSILGWQASLRQA
Ga0210393_101329682	3300021401	Soil	MKLKFTKAPTFTKAIIASAVFAIAYLASTSSLPSCSDTVAAFSSGECIERQSFLHTASGWLALIG
Ga0210393_113386942	3300021401	Soil	MKIRFTKAPTFTKAIIAAAVFAIAYLASTSNLPSCSDTMAVLSSGSDECIERQSFLHTASGWLALICLVAAVVLLAVRHKDSILGMRATVQQAYQGAPTSPPPQQ
Ga0210385_102055032	3300021402	Soil	MKIKFTKAPTFTKAIIASAVFTIVYLASTSNLPPCSDTAVILSSGGECIERQSFLHTGSGWL
Ga0210397_111523402	3300021403	Soil	MKIHFTKAPTFTKAIIATAVFGIVFLASTSSLPSCSDTIAALNSGGCIERQSYLHTASGWLALFCLLAAVLLLALKHKDTIRGWVASPQQQAPQAPSSQAPAQGHGPGRASS
Ga0210386_101277622	3300021406	Soil	MKIHFTKAPTFTKAIIATAVFGIVFLASTSSLPSCSDTLAALNSGGCIERQSYLHTASGWLALFCLLAAVLLLALKHKDTIHGWVASAQQQAPQEPSPQAPAQA
Ga0210386_113072412	3300021406	Soil	MKIRFSKAPTFTKAIIAAAVFAIVYLASSSNLPSCSDTAAVFASGGECIERQSFLHTASGWLALLCLVAAAVLLVLKYKDSILGGQASAPKGSTVRESAVQESAVQESAVQE
Ga0210386_113783581	3300021406	Soil	MKIRFTKAPTFTKAIIAAAVFAIAYLASSSNLPSCSDTVAALNSGECIERQSFLHTASGWLAIIGLIAAVVLLAVKHKDSILGRQA
Ga0210383_105385681	3300021407	Soil	MKITFTKTPTFTKAIIASAVFTIAYLASTSNLPSCNDTVAVLNAGECIERQSFLHTASGWLALICL
Ga0210390_112539921	3300021474	Soil	MKINFTKTPTFTKAIIASAIFAIAYLASTSNLPSCSDTVAVLSSGGECIERQSFLHTASGWLALICLVAAVLLLALKHKDSILGW
Ga0210402_117375321	3300021478	Soil	MKLKFTKTPTFTKAIIASAVFAIAYLASTSNLPSCSDTVAILSSGECIERQSFLHTASGWLSLICLVAAVVLLALKHKNSILGWQASIQQAHQGPSAQTQA
Ga0212123_107226322	3300022557	Iron-Sulfur Acid Spring	MKITFTKTPTFTKAIIASAVFTIAYLASTSNLPSCNDTVAVLNAGECIERQSFLHTASGWLALICLVAAIVLLALKHKNSILGWQASIQQARQGPSAPAPAPGR
Ga0207685_100288703	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MKIKFSKAPTSTKAIIASAVFTIVYLASASSLPPCSDTVAVLNSGACVVRQSFLHTASGWLALICLVVAVLLLALKHK
Ga0207700_114950791	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MKIKFSKAPTFTKAIIASAVFAIAYLASTSSLPSCSDTVAVLNSGECIERQSFLHTASGWLALICLVAAVLLLALKHKNSILGWQASIQQAHQGPSAQAQAQAQAPVPGR
Ga0207664_102705882	3300025929	Agricultural Soil	MKIKFSKAPTSTKAIIASAVFTIVYLASASSLPPCTDTVAVLNSGACVARQSFLHTASGWMALICL
Ga0207664_105325062	3300025929	Agricultural Soil	MKIRFSKAPTSTKAIIASAVFTIIYLASASSLPPCSDTVAVLNSGACVVRQSFLHTASGWLALICLVVAVLLLA
Ga0257146_10282961	3300026374	Soil	MKIKFSKAPTFTKAIIASAVFAIAYLASTSSLPSCSDTVAVLNSGECIERQSFLHTASGWLALICLVAAVLLLALKHKNSV
Ga0257147_10718312	3300026475	Soil	MKIKFSKAPTFTKAIIASAVFAIAYLASTSSLPSCSDTVAVLNSGECIERQSFLHTASGWLALICLVAAVLLLALKH
Ga0209648_101431912	3300026551	Grasslands Soil	MKIRFTKAPTFTKAIIASAVFAIVYLASTSNLPSCSDTVAVLSSGGQCIERQSFLHTASGWLALICLVAAVLLLALK
Ga0208604_10244631	3300027090	Forest Soil	MKLKFTKTPTFTKAIIASAVFAIAYLASTSNLPSCSDTVAILSSGECIERQSFLHTASGWLALICLVAAVLLLALKHKNSILGWQASIQQAHQGPSA
Ga0208099_10026321	3300027096	Forest Soil	MKIHFTKAPTFTKAIIATAVFGIVFLASTSSLPSCSDTIAALNSGGCIERQSYLHTASGWLALFCLLAAVLLLALKHKDTIHGWVASPQQQPPQAPSSQAPAPGHGPGRA
Ga0209166_106274461	3300027857	Surface Soil	MKITFTKAPTFTKTIIASAIFTIVYLASTSSLPSCTDTVAVLNAGACIERQSFLHTASGWLALICLVAAAV
Ga0209169_100109321	3300027879	Soil	MKLKFTKTPTFTKAIIASAVFTIAYLASTSNLPSCSDTAVILSSGGECIERQSFLHTGSGWLALICLLAAVLL
Ga0308309_105178492	3300028906	Soil	MKLKFTKAPTFTKAIIASAIFAIAYLASTSNLPSCSDTVAVFSSGECIERQSFLHTASGWLSLILLVTAVVLLALKHKNSILGWQASIQQVHQGPSVQEQA
Ga0311368_110511392	3300029882	Palsa	MKLTFSKAPTFTKAITASAVFAIAYLASTSNLPSCSDTVAILSSGECIERQSFLHTASGWLALICLVAAVVLLALKHKNSILG
Ga0302178_101568761	3300030013	Palsa	MKIRFTKAPTFTKAIIASAVFAIAYLASTSILPSCSDSVAILSSGGECIERQSFLHTASGWLALICLLAAVL
Ga0311372_104417241	3300030520	Palsa	MKFRITKAPTFTKAITAAAVFAIIYLATTSNLPSCSDTYAVLTSGSGECVERQSFLHTGSGWLALICLIAAVALLIIKHKD
Ga0311372_115609781	3300030520	Palsa	MKRIRFTTAPTFTKGIIAAAVFAATYLASTSNLPSCSDTAAVLSGNGECIERQSFLHTASGWLALICVVVAVLLLFLKHRDAILGRSASAKQAYQAPVAPVYAPA
Ga0311356_103913952	3300030617	Palsa	MKIRFTKAPTFTKAIIASAVFAIAYLASTSNLPSCSDTAAILSSGGDCIERQSFLHTASGWLALICLVAA
Ga0311354_113249101	3300030618	Palsa	MKIKLTKAPTFTKAITSSAVFAIVYLASTSSLPSCSDAVAALSSGGECIERQSFLHTASGWLALLCLLAAVLLLALKHKDSILGRQAPVPQPHRGPSAHAQA
Ga0265746_10406951	3300030815	Soil	MKIRFTKAPTFTKAIIASAVFAIAYLATASNLPSCSDTAAVLSSGGECIERQSFLHTASGWLALICLVAAVVLLALKHKNSILGLHASVQQARQGP
Ga0302314_102833641	3300030906	Palsa	MKFRITKAPTFTKAITAAAVFAIIYLATTSNLPSCSDTYAVLTSGSGECVERQSFLHTGSGWLALICLIAAVALLII
Ga0170824_1019719752	3300031231	Forest Soil	MKIRFSKAPTFTKAIIASAVFAIAYLASTSSLPSCSETVAILNSGGECIERQSFLHTASGWLALICLVAAVLLLALKHK
Ga0302324_1002129992	3300031236	Palsa	MKIRFTKAPTFTKAIIASAVFAIAYLASTSNLPSCSDTAAILSSGGDCIERQSFLHTASGWLALICLVAAVLLLALKHKNSILGWQASIQQVHQGPQAQAPAPVPGPGPGPG
Ga0302320_119897151	3300031524	Bog	MKIRFTKAPTFTKAIIASAVFAIAYLASTSNLPSCSDTVAILSSGGECIERQSFLHTASGWLALICLFAAVLLLALKHKDSILGWQASI
Ga0302326_101748333	3300031525	Palsa	MKLTFSKAPTFTKAITASAVFAIAYLASTSNLPSCSDTVAILSSGECIERQSFLHTASGWLALIC
Ga0302326_127297692	3300031525	Palsa	MKIRFTKTPTFTKAIIATAIFAIVYLASTSSLPSCSDTIAALNSGGECIERQSFLHTASGWLALLCLIAAVLLLALKHKTSILGLQASVQHARQGP
Ga0318542_106019092	3300031668	Soil	MKIQFTKAPTFTKAIIASAIFTIAYLASTSNLPPCSDTVAILNSGGECIERQSFLHTASGWLALICLVAAVLLLALKHKNSILGWQASIKQVRQEPSAQAQ
Ga0318572_108353002	3300031681	Soil	MKIQFTKAPTFTKAIIASAIFTIAYLASTSNLPPCSDTVAILNSGGECIERQSFLHTASGWLALICLVAAVLLLALKHKNSILGWQASIK
Ga0310686_1113785221	3300031708	Soil	MKLKFTKAPTFTKAIIASAVFAIAYLASTSNLPSCSDTAAILSSGGECIERQSFLHTASGWLALICLVAAVLLLALKHKNSILGWQA
Ga0307476_102804392	3300031715	Hardwood Forest Soil	MKIHFTKAPTFTKAIIATAVFGIVFLASTSNLPSCSDTLAALNSGGCIERQSYLHTASGWLALFCLLAAVLLLALKHKDTIHGWVASAQQQAPQEPSSQAPAQA
Ga0307476_109563171	3300031715	Hardwood Forest Soil	MKIHFTKAPTFTKAIIATAVFGIVFLASTSNLPSCSDTIAALNSGGCIERQSYLHTASGWLALFSLIAAVVLLALKHKETIRGWVASAQQQAPQEQASAAPTVQA
Ga0318565_104742101	3300031799	Soil	MKIQFTKAPTFTKAIIASAIFTIAYLASTSNLPPCSDTVAILNSGGECIERQSFLHTASGWLALICLVAAVLLLALKHKNSILGLPASVR
Ga0318551_105128861	3300031896	Soil	MKIQFTKAPTFTKAIIASAIFTIAYLASTSNLPPCSDTVAILNSGGECIERQSFLHTASGWLALICLVAAVLLLALKHKNSILGWQASAQRVRQEPSAQAQAQTPER
Ga0310913_110799751	3300031945	Soil	MKIQFTKAPTFTKAIIASAIFTIAYLASTSNLPPCSDTVAILNSGGECIERQSFLHTASGWLALICLVAAVLLLALKHKNSILGWQASIKQV
Ga0318562_106644251	3300032008	Soil	MKIQFTKAPTFTKAIIASAIFTIAYLASTSNLPPCSDTVAILNSGGECIERQSFLHTASGWLALICLVAAVLLL
Ga0318507_104015072	3300032025	Soil	MKIQFTKAPTFTKAIIASAIFTIAYLASTSNLPPCSDTVAILNSGGECIERQSFLHTASGWLALICLVAAVLLLALKHKN
Ga0318524_105347472	3300032067	Soil	MKIQFTKAPTFTKAIIASAIFTIAYLASTSNLPPCSDTVAILNSGGECIERQSFLHTASGWLALICLVAAVLLLA
Ga0306924_107771002	3300032076	Soil	MKIQFTKAPTFTKAIIASAIFTIAYLASTSNLPPCSDTVAILNSGGECIERQSFLHTASGWLALICLVAAVLLLALKHKNSILGWQASIKQ
Ga0307470_115340571	3300032174	Hardwood Forest Soil	MKINFSKAPTFTKAIIASAVFTIVYLASASSLPPCSDTVAVLNSGACVERQSFLHTASGWLALISLVAAVLLL
Ga0306920_1011728891	3300032261	Soil	MKIRFSKAPTFTKAIIASAVFAIAYLASTSSLPSCSDTVAILNSGGECIERQSFLHTACGWLALICLVAAVLLLAVKHKNSILGRQASVQQARQGPSAQAPVP
Ga0335085_107859292	3300032770	Soil	MKIRFSKAPTFTKAIIASAVFAIAYLASTSSLPSCSDTVAILNSGGECIERQSFLHTASGWLALICLVAAVLLLALKHKNSILGLQASVQ
Ga0335082_100966082	3300032782	Soil	MKITFTKAPTFTKAIIASAVFTIAYLASTSSLPPCSDTVAVLNSGECIVRQSFLHTASGWLALICLVAAVLLLALKHKNSILGLQASLQQARQGPPAQAPVPGQALS
Ga0335080_120045342	3300032828	Soil	MKIRFTKVPTFTKAIIASAVFAIAYLASTSSLPSCSDTVAILNSGGECIERQSFLHTASGWLALICLVAAVLLLALKHKN
Ga0335071_105128531	3300032897	Soil	MKIKFTKAPTFTKAIIASAVFALAYLASTSSLPSCSDTVAIVSSGGECIERQSFLHTASGWLALICLVAAMLLLALKHKNAILGWQASIQQVHQGPSAQAQAQAEAPAQA
Ga0318519_109368392	3300033290	Soil	MKIRFSKAPTFTKAIIASAVFAIAYLASTSSLPSCSDSVAIFNSGGECIERQSFLHTASGWLALICLVAAVLLLALKYKSSILGLPASMQQTRQGPRAQA
Ga0370483_0001726_5687_6013	3300034124	Untreated Peat Soil	MKIRFTKAPTFTKAIIASAVFAIAYLASTSNLPSCSDTAAILSSGGDCIERQSFLHTASGWLALICLVAAVLLLALKHKNSILGWQASIQQVHQGPQAQAQAPGPGPGP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F100900

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences