Metagenome Family F100896

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F100896
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	47 residues
Representative Sequence	MKRRDAVQLLAVAPLTAAFRWAPESVREASARAREALARGAPYEPKQF
Number of Associated Samples	87
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	98.04 %
% of genes near scaffold ends (potentially truncated)	97.06 %
% of genes from short scaffolds (< 2000 bps)	86.27 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (55.882 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (29.412 % of family members)
Environment Ontology (ENVO)	Unclassified (47.059 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.902 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 44.74% β-sheet: 0.00% Coil/Unstructured: 55.26%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF05199	GMC_oxred_C	86.27
PF07676	PD40	3.92
PF01261	AP_endonuc_2	2.94
PF00764	Arginosuc_synth	0.98
PF13618	Gluconate_2-dh3	0.98
PF13798	PCYCGC	0.98
PF14279	HNH_5	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	86.27
COG0137	Argininosuccinate synthase	Amino acid transport and metabolism [E]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	55.88 %
Unclassified	root	N/A	44.12 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	55.88 %
Unclassified	root	N/A	44.12 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	55.88 %
Unclassified	root	N/A	44.12 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.12 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	36.27 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	6.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.12 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	23.53 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	12.75 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	6.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.12 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	23.53 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.86 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	5.88 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	2.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.12 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	23.53 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.86 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	5.88 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.12 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	23.53 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.86 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	5.88 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.12 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	23.53 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.86 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	3.92 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.12 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	23.53 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.86 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	3.92 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001661\|JGI12053J15887_10219878	Not Available	956	Open in IMG/M
3300002561\|JGI25384J37096_10145581	Not Available	762	Open in IMG/M
3300004781\|Ga0062379_10145940	Not Available	591	Open in IMG/M
3300005172\|Ga0066683_10326482	Not Available	954	Open in IMG/M
3300005177\|Ga0066690_10552552	Not Available	771	Open in IMG/M
3300005178\|Ga0066688_10119020	Not Available	1631	Open in IMG/M
3300005180\|Ga0066685_10692578	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	699	Open in IMG/M
3300005439\|Ga0070711_101731417	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	548	Open in IMG/M
3300005440\|Ga0070705_100008919	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	4973	Open in IMG/M
3300005440\|Ga0070705_101941165	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	501	Open in IMG/M
3300005447\|Ga0066689_10126399	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1497	Open in IMG/M
3300005447\|Ga0066689_10827604	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	574	Open in IMG/M
3300005450\|Ga0066682_10679703	Not Available	635	Open in IMG/M
3300005454\|Ga0066687_10061683	All Organisms → cellular organisms → Bacteria	1785	Open in IMG/M
3300005467\|Ga0070706_100968997	Not Available	785	Open in IMG/M
3300005471\|Ga0070698_102158760	Not Available	510	Open in IMG/M
3300005536\|Ga0070697_100254480	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1502	Open in IMG/M
3300005540\|Ga0066697_10639301	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	587	Open in IMG/M
3300005542\|Ga0070732_10043748	All Organisms → cellular organisms → Bacteria	2577	Open in IMG/M
3300005546\|Ga0070696_100108360	Not Available	1998	Open in IMG/M
3300005546\|Ga0070696_100839445	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	758	Open in IMG/M
3300005546\|Ga0070696_101619381	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	556	Open in IMG/M
3300005554\|Ga0066661_10706531	Not Available	592	Open in IMG/M
3300005560\|Ga0066670_10023606	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2901	Open in IMG/M
3300005568\|Ga0066703_10057951	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2188	Open in IMG/M
3300005574\|Ga0066694_10033599	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2299	Open in IMG/M
3300005574\|Ga0066694_10585157	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	520	Open in IMG/M
3300005586\|Ga0066691_10533067	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300006032\|Ga0066696_10053692	All Organisms → cellular organisms → Bacteria	2273	Open in IMG/M
3300006755\|Ga0079222_11837770	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	588	Open in IMG/M
3300006796\|Ga0066665_10456513	All Organisms → cellular organisms → Bacteria	1053	Open in IMG/M
3300006796\|Ga0066665_10697393	Not Available	804	Open in IMG/M
3300006796\|Ga0066665_11404466	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	540	Open in IMG/M
3300006806\|Ga0079220_10018064	All Organisms → cellular organisms → Bacteria	2914	Open in IMG/M
3300006854\|Ga0075425_100305623	Not Available	1830	Open in IMG/M
3300006904\|Ga0075424_100284090	Not Available	1760	Open in IMG/M
3300009012\|Ga0066710_100574561	Not Available	1708	Open in IMG/M
3300009088\|Ga0099830_10850854	Not Available	753	Open in IMG/M
3300009089\|Ga0099828_10742369	Not Available	881	Open in IMG/M
3300009090\|Ga0099827_11608536	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	566	Open in IMG/M
3300009090\|Ga0099827_11949039	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	511	Open in IMG/M
3300009137\|Ga0066709_103139587	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	603	Open in IMG/M
3300009143\|Ga0099792_11101214	Not Available	535	Open in IMG/M
3300010303\|Ga0134082_10033527	Not Available	1936	Open in IMG/M
3300010320\|Ga0134109_10027005	Not Available	1802	Open in IMG/M
3300010321\|Ga0134067_10405494	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	547	Open in IMG/M
3300010325\|Ga0134064_10273066	Not Available	634	Open in IMG/M
3300010329\|Ga0134111_10352261	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	622	Open in IMG/M
3300010329\|Ga0134111_10511045	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	528	Open in IMG/M
3300010335\|Ga0134063_10058523	All Organisms → cellular organisms → Bacteria	1696	Open in IMG/M
3300010361\|Ga0126378_12568856	Not Available	582	Open in IMG/M
3300010373\|Ga0134128_12969866	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	522	Open in IMG/M
3300012189\|Ga0137388_11233137	Not Available	686	Open in IMG/M
3300012189\|Ga0137388_11923707	Not Available	521	Open in IMG/M
3300012199\|Ga0137383_10797726	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300012200\|Ga0137382_10032544	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	3130	Open in IMG/M
3300012200\|Ga0137382_11344646	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300012201\|Ga0137365_10155626	All Organisms → cellular organisms → Bacteria	1715	Open in IMG/M
3300012202\|Ga0137363_11510921	Not Available	563	Open in IMG/M
3300012205\|Ga0137362_11476024	Not Available	566	Open in IMG/M
3300012208\|Ga0137376_11512657	Not Available	562	Open in IMG/M
3300012211\|Ga0137377_10370103	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1370	Open in IMG/M
3300012285\|Ga0137370_10571750	Not Available	696	Open in IMG/M
3300012357\|Ga0137384_10064234	Not Available	3044	Open in IMG/M
3300012360\|Ga0137375_11289315	Not Available	552	Open in IMG/M
3300012532\|Ga0137373_10656963	Not Available	785	Open in IMG/M
3300012917\|Ga0137395_10758415	Not Available	702	Open in IMG/M
3300012927\|Ga0137416_10299525	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1332	Open in IMG/M
3300012930\|Ga0137407_11015092	Not Available	786	Open in IMG/M
3300012944\|Ga0137410_10157611	Not Available	1734	Open in IMG/M
3300014150\|Ga0134081_10030393	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1562	Open in IMG/M
3300014150\|Ga0134081_10402476	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	514	Open in IMG/M
3300014157\|Ga0134078_10191095	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300015052\|Ga0137411_1235298	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1163	Open in IMG/M
3300018431\|Ga0066655_10718949	Not Available	677	Open in IMG/M
3300018431\|Ga0066655_11085723	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	559	Open in IMG/M
3300018433\|Ga0066667_11412781	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	612	Open in IMG/M
3300020170\|Ga0179594_10293703	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	615	Open in IMG/M
3300025327\|Ga0209751_10907903	Not Available	676	Open in IMG/M
3300025906\|Ga0207699_10336899	Not Available	1062	Open in IMG/M
3300025910\|Ga0207684_10847869	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	770	Open in IMG/M
3300025939\|Ga0207665_10006063	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	8028	Open in IMG/M
3300026296\|Ga0209235_1003925	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	8294	Open in IMG/M
3300026318\|Ga0209471_1000849	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	19061	Open in IMG/M
3300026318\|Ga0209471_1091766	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1326	Open in IMG/M
3300026322\|Ga0209687_1146268	Not Available	761	Open in IMG/M
3300026325\|Ga0209152_10027201	All Organisms → cellular organisms → Bacteria	1960	Open in IMG/M
3300026328\|Ga0209802_1074376	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1595	Open in IMG/M
3300026330\|Ga0209473_1251844	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	608	Open in IMG/M
3300026523\|Ga0209808_1003840	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	7683	Open in IMG/M
3300026538\|Ga0209056_10289681	Not Available	1137	Open in IMG/M
3300026540\|Ga0209376_1020883	All Organisms → cellular organisms → Bacteria	4355	Open in IMG/M
3300026540\|Ga0209376_1290032	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	656	Open in IMG/M
3300026542\|Ga0209805_1348457	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	564	Open in IMG/M
3300026700\|Ga0208474_102588	Not Available	552	Open in IMG/M
3300027013\|Ga0209884_1015663	Not Available	745	Open in IMG/M
3300027633\|Ga0208988_1131518	Not Available	609	Open in IMG/M
3300027725\|Ga0209178_1192120	Not Available	720	Open in IMG/M
3300027882\|Ga0209590_10173461	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1351	Open in IMG/M
3300027950\|Ga0209885_1016966	Not Available	773	Open in IMG/M
3300031577\|Ga0316602_10102878	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	508	Open in IMG/M
3300031720\|Ga0307469_11321810	Not Available	685	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.04%
Host-Associated	Host-Associated	1.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.06%
Plants	Host-Associated → Plants	1.96%
Aquatic	Environmental → Aquatic	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.06%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.96%
Freshwater	Environmental → Aquatic → Freshwater	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.43%
Loam	Environmental → Terrestrial → Soil → Loam	15.69%
Sand	Environmental → Terrestrial → Soil → Sand	1.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.96%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.98%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	38.24%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	36.27%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.76%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.96%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.96%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.98%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.98%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.98%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.98%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	29.41%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	25.49%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	9.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.96%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.96%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.96%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.98%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.98%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.98%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300004781	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare2Fresh	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300025327	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026700	Grasslands soil microbial communities from Chapel Hill, North Carolina, USA that are Nitrogen fertilized -NN350 (SPAdes)	Environmental	Open in IMG/M
3300027013	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027633	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027950	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_40_50 (SPAdes)	Environmental	Open in IMG/M
3300031577	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_CT	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12053J15887_102198781	3300001661	Forest Soil	MKRRDAVQLLAVAPLATAFRWTPESVRDASARARDAL
JGI25384J37096_101455811	3300002561	Grasslands Soil	MKRRDAVHLXAVAPLAAAFRWAPESVREASALAREALERAAPY
Ga0062379_101459402	3300004781	Wetland Sediment	MQRREAVRVLAVAPLAAAFRWAPESVRQAAVQTRAALARGAPYEPS
Ga0066683_103264822	3300005172	Soil	MADMNRREVVGLIAAAPLAAAFPWTAELVREASARAREALARGTPYEPK
Ga0066690_105525522	3300005177	Soil	MADMNRREVIGLIAAAPLAAAFPWTAESVREASARAREALARG
Ga0066688_101190201	3300005178	Soil	MKRRDAVHLFAVAPLAAAFRWAPESVREASALAREALERAAPY
Ga0066685_106925781	3300005180	Soil	MADMNRREVVGLIAAAPLAAAFRWTPESVREASARVREALARGIPYEPKQFT
Ga0070711_1017314171	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MKRRDAVRVLAMAPVAAAFRWTPESVREASARAREALARSTPYEP
Ga0070705_1000089195	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MTDLNRREAIALLTAAPLAAGFPWTAESVRKASARAREALAHGTAYEPKQFTPHE
Ga0070705_1019411651	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MADMNRREVIGLIAGAPLAAGFPWTAESVRKASARAREALAHGTAYEPKQFTPHE
Ga0066689_101263991	3300005447	Soil	MADMNRREVVGLIAGAPLAAGFPWAAESVREASARAREAL
Ga0066689_108276043	3300005447	Soil	MADMNRREVIGLIAGAPLAAGFPWTAESVREASARAREALARGTPYEPKQFT
Ga0066682_106797032	3300005450	Soil	MKRRDAVRTLAVAPLAAAFRWTPESVREASARAREALARG
Ga0066687_100616832	3300005454	Soil	MDRRNAVQLLVIGPVAAAFRWAPESVREAAALARETLQRGVPYEPKQFTA
Ga0070706_1009689971	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MERRDAVQLLTMAPLAAAFSWTPDSIREASARAREALARGTPYQPKRF
Ga0070698_1021587601	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MADMKRREVIGLIAGAPLAAGFPWTAESVREASARAREALARGTTYEPKQFTAHEWETV
Ga0070697_1002544801	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MTHLDRREALALLAGAPFAAAWQWAPDAVREAAARAREVIARGAP
Ga0066697_106393012	3300005540	Soil	MDRRSAIRVLAAAPVATAFRWAPESVREAAALARETLQRG
Ga0070732_100437481	3300005542	Surface Soil	MAMNRRDAARLLAVAPVAAAFRWAPESVREAAALA
Ga0070696_1001083601	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MTDLNRREVIGMLAAAPLAAAFRWTPESVREASARAQEALARGTPYEPKQFTPHE
Ga0070696_1008394452	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MADMNRREVIGLIAGAPLAAGFPWTAESVRKASARAREALAHGTAYEPKQFTPH
Ga0070696_1016193811	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MTDLSRREVIGMLAAAPLAAAFRWTPESVREASARAQEALARGTPYEPKQFTPHE
Ga0066661_107065311	3300005554	Soil	MKRRDAVHLLAAAPLAAAFRWAPESVREASALARGALARGAPFEPKHFTA
Ga0066670_100236063	3300005560	Soil	MDRRSAIRVLGVAPVATAFRWAPESVREAAAQAREALGRGAPYEPKHFT
Ga0066703_100579513	3300005568	Soil	MDRRSAIRVLAAAPVATAFRWAPESVREAAALARETLQRGVPYEPK
Ga0066694_100335993	3300005574	Soil	MADMNRREVIGLIAAAPLAAAFPWTAESVREASARAREALARGTPYEPK
Ga0066694_105851571	3300005574	Soil	MDRRSAIRVLAAAPVATAFRWAPESVREAAALARETLQRGVPYEPKQFTAREWETVRL
Ga0066691_105330671	3300005586	Soil	MSAINRRKAVQILATVPLAAALRWPPESVREAAARTRDALARAAPYEPKHFTAHEWDTVR
Ga0066696_100536921	3300006032	Soil	MDRRSAVRMLAMAPVAAAFRWAPDSVREAAARARAALGRGAPYEPKHFTAHEWDTVR
Ga0079222_118377702	3300006755	Agricultural Soil	MTHLDRREVLALLAGAPLSAAFQWAPESVREAAALARESLARGASYEPKQFTLHEW
Ga0066665_104565132	3300006796	Soil	MDRRSAVGLLAAAPLATAFRWAPESVREASALAREALERGAPYDPKNFTAHEWETVRL
Ga0066665_106973933	3300006796	Soil	MADMNRREVIGLLATAPLAAAFRWTPESVREASARAREALARGIPYEPK
Ga0066665_114044661	3300006796	Soil	MKRREAVQLLAVAPLATAFRWAPESVSRAAALARGALDRGAPYEPKFFTAH
Ga0079220_100180641	3300006806	Agricultural Soil	MKRRDAVHVLAAAPIAAAFGWTPESVREASALARRA
Ga0075425_1003056231	3300006854	Populus Rhizosphere	MADMNRREVIGLIAGAPLAAGFPWTAESVREASAR
Ga0075424_1002840902	3300006904	Populus Rhizosphere	MADMNRRDVIGMLATAPLAAAFRWTPESVREASARARE
Ga0066710_1005745611	3300009012	Grasslands Soil	MQRRDAVQVLAVAPLAAAFRWAPESVREASALARTAVARG
Ga0099830_108508542	3300009088	Vadose Zone Soil	MQRRDAVHVLAVAPLAAAFRWAPESVREASALAPMAVARGS*
Ga0099828_107423692	3300009089	Vadose Zone Soil	MKRRDAVQLLAVAPLTAAFRWAPESVREASARAREALARGAPYEPKQFTT
Ga0099827_116085362	3300009090	Vadose Zone Soil	MTTMNRRDVVQLLAVAPLAAAFRWAPESVREATALAREALARGLPYEPKNFTAHE
Ga0099827_119490392	3300009090	Vadose Zone Soil	MDRRSAIGLFAMAPVATAFRWAPESVREAAAQAREALAPTRGPTG
Ga0066709_1031395872	3300009137	Grasslands Soil	MLAMAPVAAAFRWAPDSVREAAARARAALGRGAPYEPKHF
Ga0099792_111012142	3300009143	Vadose Zone Soil	MKRRDAVQLLAVAPLTAAFRWAPESVREASARAREALARGAPYEPKQF
Ga0134082_100335271	3300010303	Grasslands Soil	MGEAMDRRSVIGLLASAPVATAFRWAPESVREAAALARETLQRGVPYE
Ga0134109_100270052	3300010320	Grasslands Soil	MKRRDAVHLFAVAPLAAAFRWAPESVRDASALARQALETG
Ga0134067_104054942	3300010321	Grasslands Soil	MDRRSVIGLLASAPVAAAFRWAPDSVREAAARARAALGRGAPYEPKHFTAHEWDTV
Ga0134064_102730662	3300010325	Grasslands Soil	MDRREAVRLLAVTPLVAAFAFTPDSVREASARAREALA
Ga0134111_103522611	3300010329	Grasslands Soil	MNRREVIGMLAAAPLAAAFRWTPESVREASARAHDALARGTPYEPKQ
Ga0134111_105110452	3300010329	Grasslands Soil	MSTMNRRDVVRLLTVAPLATAFRWAPESVSRAAALA
Ga0134063_100585231	3300010335	Grasslands Soil	MDRRNAVQLLVIGPVAAAFRWAPESVREAAALARETLQRGVPY*
Ga0126378_125688562	3300010361	Tropical Forest Soil	MKRRDAAKIVVVAPVTAAFRWAPESVREAAARAREVIGVDPPYAP
Ga0134128_129698661	3300010373	Terrestrial Soil	MQRRDMVHLLAVAPLAAAFQWAPESVRQAALQARAAIKRGSPNEPKI
Ga0137388_112331371	3300012189	Vadose Zone Soil	MERREAVRILAIAPLAAAFRWAPESVREATALAREA
Ga0137388_119237071	3300012189	Vadose Zone Soil	MKRRDAVQLLAVAPLTAAFRWTPQSVREASARAREALARGTPYE
Ga0137383_107977261	3300012199	Vadose Zone Soil	MKRRDAVRTLAVAPLAAAFRWTPELVREASARAREALARGTTYEPKAFTAHEWET
Ga0137382_100325444	3300012200	Vadose Zone Soil	MSTIDRREIVRLLAVAPLAATFRWAPDSVREAAARAREALGRGAPYEPKHFTAHEWDTVR
Ga0137382_113446461	3300012200	Vadose Zone Soil	MDRRSVIGLLASAPVAAAFRWAPDSVREAAARAREALGRGAPYEPKHFTAHEWDTVRL
Ga0137365_101556261	3300012201	Vadose Zone Soil	MDRRSVVSLLTVAPLATAFRWAPESVREASALAREAFERRTPYQPKNFTAHEWDTVR
Ga0137363_115109212	3300012202	Vadose Zone Soil	MKRRDAVQLLAVAPLTAAFRWTPESVREASARARDALA
Ga0137362_114760241	3300012205	Vadose Zone Soil	MKRRDAVQLLAVAPLTAAFRWAPESVREASARARDALARGAP
Ga0137376_115126572	3300012208	Vadose Zone Soil	MKRREAVHLLAVAPLAAAFQWAPESVRQAALRARETITSGDPYEPKIF
Ga0137377_103701031	3300012211	Vadose Zone Soil	MDRRSVIGLLASAPVAAAFRWAPESVREAAALARETLQRGVPYEPKQFTAHEW
Ga0137370_105717502	3300012285	Vadose Zone Soil	MSRREAVHLLAVAPVAAAFGWAPESVREASALARQALENRAPYEPKNFTAR
Ga0137384_100642341	3300012357	Vadose Zone Soil	MRTMNRRDVVQLLAVAPLAAAFRWTPESVQRAAALAREALRGGAPYEPKHFTAH
Ga0137375_112893152	3300012360	Vadose Zone Soil	MCAMSTINRREVVQLLAVAPLAAAFRWTPESVREASALAREALSRGVPYEPK
Ga0137373_106569632	3300012532	Vadose Zone Soil	MKRREAVHLLAVAPLAAAFRWAPESVRQAALRARETIK
Ga0137395_107584151	3300012917	Vadose Zone Soil	MKRRDAVQLLAVAPLTAAFRWTPQSVREASSRAREALARGTP
Ga0137416_102995251	3300012927	Vadose Zone Soil	VKRRDAVRVLAVAPLAAAFRWTPESVREASARARDALAR
Ga0137407_110150921	3300012930	Vadose Zone Soil	MTDLNRREAVALLATAPLAAGFPWTAESVREASARARDALARGTPYEPKQFTAHEWDTV
Ga0137410_101576112	3300012944	Vadose Zone Soil	MKRRDAVRLLAVAPLAAAFQWAPESVRLAALQTREAIKRGSRYEP
Ga0134081_100303932	3300014150	Grasslands Soil	MNRREVIGLIAAAPLAAAFPWTTESVRDASARARAALA
Ga0134081_104024762	3300014150	Grasslands Soil	MSRREAVRLLAVAPVAAAFSWAPESVRDAVALAREARAR
Ga0134078_101910952	3300014157	Grasslands Soil	MDRREAVRLLAVTPLVAAFAFTPDSVREASARAREALARGLP
Ga0137411_12352982	3300015052	Vadose Zone Soil	MKRRDAVRVLTVAPLAAAFRWTPESVREASARAQEALARGTPYEPK
Ga0066655_107189492	3300018431	Grasslands Soil	MDRRSAVSLLAVAPVAAAFRWAPESVREASALARVALERAAPYDPKNF
Ga0066655_110857231	3300018431	Grasslands Soil	MTDMNRREVIGLIAAAPLAAAFPWTTESVRDASARARAALARGTPYEPKQ
Ga0066667_114127812	3300018433	Grasslands Soil	MADMNRREVIGLIAAAPLAAAFPWTAESVREASARAREAL
Ga0179594_102937031	3300020170	Vadose Zone Soil	MKRRDAVRVLAVAPVAAAFRWTPESVREASARARDALTRGTPYQPKQFTTHQ
Ga0209751_109079032	3300025327	Soil	MKRREAVRLLAVAPLAAAFRWAPESVRQAAVQTRAAL
Ga0207699_103368991	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	LTTHLDRREVLALLAGAPLAAAFQWAPDSVREAAARAREVIARGAPYEPKRF
Ga0207684_108478692	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MADMNRREVIGLIAGAPLAAGFPWTAESVRKASARAREALAHGTAYEPKQFTP
Ga0207665_100060631	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MTDLNRREVIGMLAAAPLAAAFRWTPESVREASARAQEALARGTPYEPKQFT
Ga0209235_10039251	3300026296	Grasslands Soil	VTDLSRREVVALLATAPLAAAFPWTADSVREASARARAALARGTPYEP
Ga0209471_10008491	3300026318	Soil	MADMNRREVVGLIAGAPLAAGFPWAAESVREASARAREALA
Ga0209471_10917662	3300026318	Soil	MDRRSVIGLLASAPVAAAFRWAPESVREAAARAREALARGAVYEPKHFS
Ga0209687_11462681	3300026322	Soil	MDRRNAVQLLVIGPVAAAFRWAPESVREAAALARETLQRGVP
Ga0209152_100272013	3300026325	Soil	MADMNRREVVGLIAAAPLAAAFPWTAESVREASARAQEALARGTPYEPKRSWT
Ga0209802_10743762	3300026328	Soil	VADMNRREVVSLIAAAPLAAAFPWTAESVREASARAREALALGTPYEPKQFTAHEWDTVR
Ga0209473_12518441	3300026330	Soil	MADMNRREVIGLIAAAPLSAAFPWTAESVREASARAREALARGTP
Ga0209808_10038401	3300026523	Soil	MKRRDAVRTLAVAPLAAAFRWTPESVRDASARAREALARGTTYEPKAFTAHERETVRV
Ga0209056_102896812	3300026538	Soil	VAERVTRRDVVRLLAVAPLATAFRWAPESVSRAAALA
Ga0209376_10208835	3300026540	Soil	MADMNRREVIGLIAAAPLAAAFPWTTESVRDASARARE
Ga0209376_12900321	3300026540	Soil	MSTMNRRDVVRLLTVAPLATAFRWAPESVSRAAALAR
Ga0209805_13484571	3300026542	Soil	MDRRSVIGLLASAPVATAFRWAPESVREAAALARETL
Ga0208474_1025882	3300026700	Soil	LTTHLDRREALALLAGAPLATAFQWAPDAVREAAARAREVIARGAPYEPKQFTPHE
Ga0209884_10156631	3300027013	Groundwater Sand	MQRRDAVQLLAVAPLAAAFRWRPESVREASARAREALARG
Ga0208988_11315182	3300027633	Forest Soil	MKRRDAVQLLAVGPLAAAFRWTPESVREASARACEALARGT
Ga0209178_11921202	3300027725	Agricultural Soil	MTHLDRREALALLAGAPLATAFQWAPDAVREAAARAREVIARGAPYEPKQFTPH
Ga0209590_101734611	3300027882	Vadose Zone Soil	MKRRDAVRTLAVAPLAAAFRWTPESVREASARAREALARGTTYEPKALTAHEWETVR
Ga0209885_10169661	3300027950	Groundwater Sand	MQRRDAVQLLAVAPLAAAFRWRPESVREASARAREA
Ga0316602_101028781	3300031577	Soil	VTDGMDRREAVRLLALGPLAVAFGYTPESVREASALAREALARGTPYEPKHFTAHEWD
Ga0307469_113218101	3300031720	Hardwood Forest Soil	MAMNRRDAARLLVVAPVATAFRWAPESVREAAALAREALAGQGPPF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F100896

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences