Metagenome / Metatranscriptome Family F100870

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F100870
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	103 residues
Representative Sequence	MDSENRMSVRRSLIPLALAICATAAAVSCGDPSPLGVAFPAPAFQRGGRWTPHDTTGAGLVACLQTYDSVTQVIGPAGGLIAVGHHYLWVDSMALSDTVSITAVAPA
Number of Associated Samples	73
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	98.99 %
% of genes near scaffold ends (potentially truncated)	95.10 %
% of genes from short scaffolds (< 2000 bps)	84.31 %
Associated GOLD sequencing projects	68
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.23

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.059 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (32.353 % of family members)
Environment Ontology (ENVO)	Unclassified (57.843 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.784 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 22.22% β-sheet: 13.33% Coil/Unstructured: 64.44%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.23
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.23
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF00158	Sigma54_activat	5.88
PF02954	HTH_8	4.90
PF00496	SBP_bac_5	1.96
PF00248	Aldo_ket_red	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.06 %
Unclassified	root	N/A	2.94 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.06 %
Unclassified	root	N/A	2.94 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.06 %
Unclassified	root	N/A	2.94 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	23.53 %
Unclassified	root	N/A	2.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	23.53 %
Unclassified	root	N/A	2.94 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	23.53 %
Unclassified	root	N/A	2.94 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.98 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	23.53 %
Unclassified	root	N/A	2.94 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.98 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	23.53 %
Unclassified	root	N/A	2.94 %
Sinorhizobium/Ensifer group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group	0.98 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	23.53 %
Unclassified	root	N/A	2.94 %
Sinorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium	0.98 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	23.53 %
Unclassified	root	N/A	2.94 %
Sinorhizobium meliloti	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium meliloti	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002908\|JGI25382J43887_10182817	All Organisms → cellular organisms → Bacteria	1028	Open in IMG/M
3300002915\|JGI25387J43893_1054599	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	572	Open in IMG/M
3300005166\|Ga0066674_10027505	All Organisms → cellular organisms → Bacteria	2497	Open in IMG/M
3300005167\|Ga0066672_10613546	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	704	Open in IMG/M
3300005172\|Ga0066683_10368256	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300005172\|Ga0066683_10508946	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300005176\|Ga0066679_10206531	All Organisms → cellular organisms → Bacteria	1253	Open in IMG/M
3300005180\|Ga0066685_10641695	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300005186\|Ga0066676_10796291	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300005556\|Ga0066707_11032776	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300005558\|Ga0066698_10231348	All Organisms → cellular organisms → Bacteria	1271	Open in IMG/M
3300005576\|Ga0066708_10355773	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	940	Open in IMG/M
3300005587\|Ga0066654_10411457	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	738	Open in IMG/M
3300006031\|Ga0066651_10198795	All Organisms → cellular organisms → Bacteria	1061	Open in IMG/M
3300006032\|Ga0066696_10802510	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium meliloti	601	Open in IMG/M
3300006791\|Ga0066653_10082654	All Organisms → cellular organisms → Bacteria	1420	Open in IMG/M
3300006791\|Ga0066653_10098802	All Organisms → cellular organisms → Bacteria	1327	Open in IMG/M
3300006796\|Ga0066665_10892194	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300006797\|Ga0066659_11820520	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300009012\|Ga0066710_100247400	All Organisms → cellular organisms → Bacteria	2577	Open in IMG/M
3300009137\|Ga0066709_100391016	All Organisms → cellular organisms → Bacteria	1926	Open in IMG/M
3300009137\|Ga0066709_104539237	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300010301\|Ga0134070_10093641	All Organisms → cellular organisms → Bacteria	1042	Open in IMG/M
3300010301\|Ga0134070_10372904	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300010322\|Ga0134084_10174864	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	737	Open in IMG/M
3300010323\|Ga0134086_10143543	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300010323\|Ga0134086_10447556	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300010329\|Ga0134111_10168689	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	874	Open in IMG/M
3300010329\|Ga0134111_10303334	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	666	Open in IMG/M
3300010333\|Ga0134080_10172308	All Organisms → cellular organisms → Bacteria	926	Open in IMG/M
3300010333\|Ga0134080_10695106	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300010335\|Ga0134063_10028077	All Organisms → cellular organisms → Bacteria	2373	Open in IMG/M
3300010335\|Ga0134063_10162807	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1039	Open in IMG/M
3300010337\|Ga0134062_10229758	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	856	Open in IMG/M
3300012198\|Ga0137364_10364314	All Organisms → cellular organisms → Bacteria	1079	Open in IMG/M
3300012198\|Ga0137364_10396345	All Organisms → cellular organisms → Bacteria	1033	Open in IMG/M
3300012198\|Ga0137364_10563089	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300012199\|Ga0137383_10030881	All Organisms → cellular organisms → Bacteria	3760	Open in IMG/M
3300012200\|Ga0137382_10217565	All Organisms → cellular organisms → Bacteria	1316	Open in IMG/M
3300012200\|Ga0137382_10473958	All Organisms → cellular organisms → Bacteria	887	Open in IMG/M
3300012200\|Ga0137382_11303586	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300012201\|Ga0137365_10054812	All Organisms → cellular organisms → Bacteria	3013	Open in IMG/M
3300012201\|Ga0137365_10075693	All Organisms → cellular organisms → Bacteria	2539	Open in IMG/M
3300012207\|Ga0137381_10218416	All Organisms → cellular organisms → Bacteria	1654	Open in IMG/M
3300012208\|Ga0137376_10070724	All Organisms → cellular organisms → Bacteria	2903	Open in IMG/M
3300012208\|Ga0137376_11379121	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300012208\|Ga0137376_11684575	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300012209\|Ga0137379_10415620	All Organisms → cellular organisms → Bacteria	1254	Open in IMG/M
3300012209\|Ga0137379_10889287	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300012209\|Ga0137379_11040054	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300012210\|Ga0137378_10114979	All Organisms → cellular organisms → Bacteria	2479	Open in IMG/M
3300012210\|Ga0137378_11121226	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300012210\|Ga0137378_11717611	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300012211\|Ga0137377_10076442	All Organisms → cellular organisms → Bacteria	3143	Open in IMG/M
3300012211\|Ga0137377_11267320	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	667	Open in IMG/M
3300012211\|Ga0137377_11294711	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300012211\|Ga0137377_11300949	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300012285\|Ga0137370_10685278	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	637	Open in IMG/M
3300012353\|Ga0137367_10239132	All Organisms → cellular organisms → Bacteria	1307	Open in IMG/M
3300012353\|Ga0137367_10720120	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300012357\|Ga0137384_10695291	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300012358\|Ga0137368_10761399	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300012359\|Ga0137385_10129463	All Organisms → cellular organisms → Bacteria	2226	Open in IMG/M
3300012359\|Ga0137385_11489298	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300012930\|Ga0137407_11038924	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	776	Open in IMG/M
3300012972\|Ga0134077_10210676	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300012975\|Ga0134110_10014088	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	3052	Open in IMG/M
3300012975\|Ga0134110_10097507	All Organisms → cellular organisms → Bacteria	1186	Open in IMG/M
3300012976\|Ga0134076_10268552	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	732	Open in IMG/M
3300012976\|Ga0134076_10418177	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300014154\|Ga0134075_10204989	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	849	Open in IMG/M
3300015356\|Ga0134073_10185074	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	682	Open in IMG/M
3300015358\|Ga0134089_10210192	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	785	Open in IMG/M
3300015359\|Ga0134085_10401612	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	615	Open in IMG/M
3300015359\|Ga0134085_10503661	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300015359\|Ga0134085_10607550	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300017656\|Ga0134112_10067544	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1315	Open in IMG/M
3300017657\|Ga0134074_1294628	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	590	Open in IMG/M
3300018054\|Ga0184621_10027737	All Organisms → cellular organisms → Bacteria	1789	Open in IMG/M
3300018076\|Ga0184609_10534884	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300019255\|Ga0184643_1466629	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300019869\|Ga0193705_1003725	All Organisms → cellular organisms → Bacteria	3348	Open in IMG/M
3300020170\|Ga0179594_10094632	All Organisms → cellular organisms → Bacteria	1068	Open in IMG/M
3300021081\|Ga0210379_10379861	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300022534\|Ga0224452_1141701	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300026296\|Ga0209235_1254924	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300026297\|Ga0209237_1018292	All Organisms → cellular organisms → Bacteria	4050	Open in IMG/M
3300026307\|Ga0209469_1038574	All Organisms → cellular organisms → Bacteria	1559	Open in IMG/M
3300026314\|Ga0209268_1082675	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	933	Open in IMG/M
3300026317\|Ga0209154_1286359	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300026327\|Ga0209266_1096336	All Organisms → cellular organisms → Bacteria	1304	Open in IMG/M
3300026329\|Ga0209375_1300872	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300026523\|Ga0209808_1170452	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	796	Open in IMG/M
3300026536\|Ga0209058_1212025	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	772	Open in IMG/M
3300027903\|Ga0209488_11205895	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300028720\|Ga0307317_10171667	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300028814\|Ga0307302_10128265	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1222	Open in IMG/M
3300028814\|Ga0307302_10550340	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300031421\|Ga0308194_10117579	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.10%
Aquatic	Environmental → Aquatic	4.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.10%
Sediment	Environmental → Aquatic → Sediment	2.94%
Freshwater	Environmental → Aquatic → Freshwater	1.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	95.10%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.94%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	62.75%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	32.35%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.94%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.96%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	32.35%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	25.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	25.49%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.90%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.96%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.96%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002915	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300019255	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25382J43887_101828172	3300002908	Grasslands Soil	MHSENRMSIRRSLIPFALAFCATAAAVSCGDPSPVGVAIPAPAFQRGGRAALYGSGLVSCLQTYDSVTQVIGPAGGLIAVGHHYLWVDSMALSDTVSITAVAPA
JGI25387J43893_10545991	3300002915	Grasslands Soil	MDSKARMSVRRSLIPLALAACATAAAVSCGGPSPVGVDPQTPALQDASKWALPQTKGSGLVACSQTYDSVTQVIGPAGGLIAVGRHFL
Ga0066674_100275051	3300005166	Soil	MALRRLLIPLALLAALAATSSCTDPSPLGVPAFRRGGRGQEGSTKGTGLLACSQTYDSVTQVVGPAGGFIVVGSHILWVDTMALAD
Ga0066672_106135462	3300005167	Soil	MDSETRMSVRRSLIQLALAACATAAAVSCRDPSPVGVDIQAPAVQASGWRPTVTTESGLVPCAQTYDSVTQVIGPAGGLIAVGRHFLWVDSMALR
Ga0066683_103682562	3300005172	Soil	MNLENRMPLRRTLIPLMLLGALAAAASCADPSPMGVPAFQRGGKWSPPPTNGVGLVTCSQTYDSVTQVIGPAGGLIAVGNHFLWVDTMALSDTVSITAVAPADTVRWVRFSP
Ga0066683_105089461	3300005172	Soil	MHSEDRMSVRRSLIPLALAVCATAAAVSCRDPSPLGVAIPAPSFQQGGRWTLPGTKGAGLVACLQTYDSVTQVIGPAGGLIAVGHHYLWVDSMALSDTVSI
Ga0066679_102065313	3300005176	Soil	MDSETRMSVRRSLIQLALAACATAAAVSCRDPSPVGVDIQAPAVQASGWRPTVTTESGLVPCAQTYDSVTQVIGPAGGLIAVGRHFLWVDSMA
Ga0066685_106416951	3300005180	Soil	MHSEDRMSVRRSLIPLALAFCATVAAVSCGDPSPLGVAIPTPAFQRGGRGWFYTSGPGLVPCSQTYDSVTQVIGPAGGLIAVGHHYLWVDSMALSDTV
Ga0066678_107872712	3300005181	Soil	MDSKARMSVRRFLIPLALAACVIAAAVSCGGPSPVGVDAQTPVLQEGSRWALPQTQGSGLVACSQTYDSVTQVIGPA
Ga0066676_107962911	3300005186	Soil	MDSENRMSVRRSLIPLALAICATAAAVSCGDPSPLGVAFPAPAFQRGGRWTPHDTTGAGLVACLQTYDSVTQVIGPAGGLIAVGHHYLWVDSMALSDTVSI
Ga0066701_107083632	3300005552	Soil	MDSKARMSVRRSLIPLALAACATAAAVSCGGPSPVGVDPQTPALQEGSRWALPQTKGSGLIACSQTYDSVTQVIGPAGGLIAVG
Ga0066707_110327761	3300005556	Soil	MNLENRMPVRRSVIPLALFAAAIAAIASCADPSPMGVPAFQRGGKWPSQPTKGVGLVACAQTYDSVTQVIGPAGGFIVVGSHILWVDTMALADTVRITAVAPADT
Ga0066698_102313483	3300005558	Soil	MDSENRMSVRRSLIPLALAICATAAAVSCGDPSPLGVAFPAPAFQRGGRWTPHDTTGAGLVACLQTYDSVTQVIGPAGGLIAVGHHYLWVDSMALSD
Ga0066708_103557731	3300005576	Soil	MDSETRVSVRRSLIPLALAACATAAAVSCGGPSPVGVDLQAPALPEAARQTLPATKGFGLVACSQTYDSVTQVIGPAGGLIVVGHHFLWVDSMALSDTVRITAVAPAG
Ga0066654_104114571	3300005587	Soil	MDSETRMSVRRSLIQLALAACATAAAVSCRDPSPVGVDIQAPAVQASGWRPTVTTESGLVPCAQTYDSVTQVIGPAGGLIAVGRHFLWVDSMALRDTVRITAVAPADTVRWVRF
Ga0066651_101987952	3300006031	Soil	MDSEDRMSVRRSLIPLALAVCATAAAVSCRDPSPLGVDIQAPAVQASRWRPTVTKGSGLVACAQTYDSVTQVIGPAGGLIAIGHHFLWVDSMALSDTVSITAVAPADT
Ga0066696_108025101	3300006032	Soil	MSVRRALFPLALAACATAAAVSCGDPSPVGVDVPAPAFQQGGRWSVPETAGPGLVACSQTYDSVTQVIGPAGGLITVGRHFLWVDSMALSDTVRITAV
Ga0066653_100826541	3300006791	Soil	MNSKNRMSVRRSLIPLALVVCAAAALSCGDPSPTGVPAFQRGGRGWYYTSGPGLVPCTQTYDSVTQVIGPAGGLIAVGHHYLWVDSMALSDTVRITAVAPADTVRWVRFQPDGLRFRTNG
Ga0066653_100988023	3300006791	Soil	MDSETRMSVRRSLIPLALAACATAAAVSCRDPSPVGVDIQAPAVQASGWRPTVTTGSGLVPCAQTYDSVTQVIGPAGGLIAVGRHFLWVDSMALRDTVRITAVAP
Ga0066665_108921942	3300006796	Soil	MDSENRMSVRRSLIPLALAICATAAAVSCGDPSPLGVAFPAPAFQRGGRWTPHDTTGAGLVACLQTYDSVTQVIGPAGGLIAVGHHYLWVDSMALSDTVSIT
Ga0066659_118205202	3300006797	Soil	VHSKDRLSVRRSLIPLALAVCITAAAASCRDPSPVGVYAQTPAFQQAGRWALPVTKRSGVVACSQTYDSVTRVIGPAGGLIAVGRHILWVDSMALNDTVRITAVAPADTVRRVRFKPDG
Ga0066710_1002474003	3300009012	Grasslands Soil	VHSKDRLSVRRSLIPLALAVCITAAAASCRDPSPVGVYAQTPAFQQAGRWALPVTKRSGVVACSQTYDSVTRVIGPAGGLIAVGRHILWVDSMALNDTVRITAVAPADTVRRVRFKPDGLQFRTN
Ga0066709_1003910163	3300009137	Grasslands Soil	MFVRRSLIPLALAASATAAALSCRDPSPVGVDLRAPALLASKWAPTVMKTSGLIACAQTYDSVTQVIGPAGGLIAVGHHYLWVDSMALSDTVSITAVA
Ga0066709_1045392372	3300009137	Grasslands Soil	VHSKDRLSVRRSLIPLALAVCITAAAASCRDPSPVGVYAQTPAFQQAGRWALPVTKRSGVVACSQTYDSVTRVIGPAGGLIAVGRHILWVDSMALNDTVRITAVAPADTVRRVRFKPDGLQFR
Ga0134070_100936411	3300010301	Grasslands Soil	MDSENRMSVRRSLIPLALAICATAAAVSCGDPSPLGVAFPAPAFQRGGRWTPHDTTGAGLVACLQTYDSVTQVIGPAGGLIAVGHHYLWVDSMALSDTVS
Ga0134070_103729042	3300010301	Grasslands Soil	MDSEDRMFVRRSLIPLALAVCATAAAVSCRDPSPLGVAIPAPSFQQGGRWTLPGTKGAGLVACLQTYDSVTQVIGPAGGLIAVGHHYLWVDSMALSDTVSITAVAPADTVRWVRFQPDGLRFRTN
Ga0134088_105421342	3300010304	Grasslands Soil	MNLENRMPLRRTLIPLMLLAALAAAASCADPSPMGVPAFQRGGKWPSQPTKGVGLVACAQTYDSVTQVIGPAGGLIAVGNHFLWVDTMAL
Ga0134084_101748642	3300010322	Grasslands Soil	MSVRRSLIPLALAACATAAAVSCGDSSPVGVDPQAPGFQQGGKWTLPETKGSGLVACSQAYDSVTQVIGPAGGLIAVGSHFLWVDSMALSDTVSITAVAPTDTVRWVRFQPDGLQFRTN
Ga0134086_101435431	3300010323	Grasslands Soil	MHSEDRMSVRRSLIPLALAVCATAAAVSCGDPSPVGVDLRAPAYLQASRRAPLPTKGYGLVACAQTYDSVTQLIGPAGGLIAVGHHF
Ga0134086_104475561	3300010323	Grasslands Soil	MDSENRMSVRRSLIPLALAICATAAAVSCGDPSPLGVAFPAPAFQRGGRWTPHYTTGAGLVACLQTYDSVTQVIGPAGGLIAVGHHYLWVDSMALSDTVSITAVAPADTVRWVRFQPDGLRFRTNGAGW
Ga0134111_101686891	3300010329	Grasslands Soil	MSVRRSLIPLALAACATAAAVSCGGPSPVGVDPQTPALQEGSRWALPETKGSGLVACSQTYDSVTQVIGPAGGLIAVGRHFLWVDSMALSDT
Ga0134111_103033341	3300010329	Grasslands Soil	MDSKARMSVRRFLIPLALAACVIAAAVSCGGPSPVGVDAQTPVLQEGSRWALPQTQGSGLVACSQTYDSVTQVIGPAGGLIAVGRHFLWVDSMALSDTVSITAVAPADTVRWVRFRPDGLRFRTNG
Ga0134080_101723081	3300010333	Grasslands Soil	MSVRRSLIPLALAFCATVAAVSCGDPSPLGVAIPTPAFQRGGRGWFYTSGPGLVPCSQTYDSVTQLIGPAGVIISVGHHYLWV
Ga0134080_106951062	3300010333	Grasslands Soil	MDSENRMSVRRSLIPLALAICATAAAVSCGDPSPLGVAFPAPAFQRGGRWTPHDTTGAGLVACLQTYDSVTQVIGPAGGLIAVGHHYLWVDSMALSDTVSITAVAPA
Ga0134063_100280771	3300010335	Grasslands Soil	MFVRRSLIRLALAACATAAAVSCGDPSPLGVDLQAPAFRKGSSWSLPETKGSGLVACSQTYDSVTQVIGPAGGLIVVGHHFLWVDAMAFIDTV
Ga0134063_101628072	3300010335	Grasslands Soil	MSVRRSLIQLALAACATAAAVSCRDPSPVGVDIQAPAVQASGWRPTVMTGSGLVPCAQTYDSVTQVIGPAGGLIAVGRHFLWVD
Ga0134062_102297581	3300010337	Grasslands Soil	MDSETRVSVRRSLIPLALAACATAAAVSCGGPSPVGVDLQAPALPEAARQTLPATNGSGLVACSQTYDSVTQVIGPAGGLIVVGHHFLWVDSMALSDTVRITAVAPADTVRWV
Ga0137364_103643141	3300012198	Vadose Zone Soil	MSLRRSLIPLALAACATAAALSCGDPSPVGVDVPMPAFQQGGRWTLPASKGASLVACSQTYDSVTQLIGPAGGLIAVGHHFLWVDSMALSDTVSITA
Ga0137364_103963451	3300012198	Vadose Zone Soil	MNSENRMFVRRFLFPFALAVCATAAALSCRDASPVGVDLRAPALLASKWGPTVTKTSGLVACAQTYDSVTQVIGPAGGLIAVGHHFLWVDSMALSDTVSITAVAPADTVRWVRFQPDG
Ga0137364_105630892	3300012198	Vadose Zone Soil	MNLENRMALRRSLIPLALLAALAATSSCTDPSPLGVPEFRRGGRGQDGSTKGTGLLACSQTYDSVTQVVGPAGGFIVVGSHILWVDTMALADTVRITAVAPADTVRWVRFQ
Ga0137383_100308815	3300012199	Vadose Zone Soil	MNSEDRMFVRRSLIPLALAVCATAAAVSCRDPSPVGVAIPAPSFQQGGRWTIPGTKGAGLVACLQTYDSVTQVIGPAGGLIAVGHHYLWVDSMALSDTVSI
Ga0137382_102175653	3300012200	Vadose Zone Soil	MSVRRSLIPLALAACATAAAVSCGDPSPVGVDLRAPALLASKWGPTVTKTSGLVACAQTYDSVTQVIGPAGGLIAVGHHYLWVDSMALSDTVSITAVAPAD
Ga0137382_104739581	3300012200	Vadose Zone Soil	MDSEDRMFVRRSLIPLALAVCATAAAVSCRDPSPLGVAIPAPSFQQGGRWTLPGTKGAGLVACLQTYDSVTQVIGPAGGLIAVGHHFLWVDSMALSDTVS
Ga0137382_113035862	3300012200	Vadose Zone Soil	MDSEDRMSVRRSLIPLALAVCATAAAVSCRDPSPLGVDIQAPAVQASRWRPTVTKGSGLVACAQTYDSVTQVIGPAGGLIAIGHHFLWVDSMALSDTVSITAVAPADTVR
Ga0137365_100548124	3300012201	Vadose Zone Soil	MHSEDRMSVRRSLISLALAVCATAAAVSCRDPSPVGVDIQAPAVQASRWKPTVTKGSGLVACAQTYDSVTQVIGPAGGIIAVGSHFLWVDSMALSDTVSITAVAPADTVRWVRFRPDGL
Ga0137365_100756933	3300012201	Vadose Zone Soil	MSVRRSLIPLALAACATAAAVSCRDSSPVGVDPQAPAFQQGGKWTLPETKGSGLVACSQAYDSVTQVIGPAGGLIAVGSHFLWVDSMALSDTVSITAVAPADTVRWVRFRPDGL
Ga0137381_102184163	3300012207	Vadose Zone Soil	MSVRRSLIPLALAVCATAAAVSCRDPYAPALQASKWAPAGTKGYGLVACAQTYDSVTQVIGPAGGLIAVGHHFLWVDSMALSDTVS
Ga0137376_100707244	3300012208	Vadose Zone Soil	MHSEDRMSVRRSLIPLALAFCAIAAAVSCGDPSPVGVAIAPPAFQRGGRGWYYTSGPGLVPCTQTYDSVTQVIGPAGGLIAVGHHYLWVDSMALSDTV
Ga0137376_113791211	3300012208	Vadose Zone Soil	MDSEDRMFVRRSLIPLALAVCATAAAVSCRDPSPLGVAIPAPSFQQGGRWTLPGTKGSGLVACAQTYDSVTQVIGPAGGLIAVGHHFLWVDSMALSDTVSITAVAPADTV
Ga0137376_116845751	3300012208	Vadose Zone Soil	MDSENRVAFRRSLIPLALLAALAATSSCTDPSPLGVPAFRRGGTWDDGSTKGAGLLACSQTYDSVTQVVGPAGGFIVVGSHILWVDT
Ga0137379_104156201	3300012209	Vadose Zone Soil	MHSEDRMSVRRSLIPLALAVCATAAALSCGDPSPVGLEAPAVPQAIRWSSPATKGSGLVACLQTYDSVTQVVGPAGGLIAVGHHYLWVDSMALSDTVSITAVAPADTVR
Ga0137379_108892872	3300012209	Vadose Zone Soil	MDSEDRMSVRRSLIPLALAVCATAAALSCGDSSPVGLQAPGLPQAIRWSSPATKGSGLVACLQTYDSVTQVVGPAGGLIAVGHHYLWVDSMALSDTVSITAVAPADTVR
Ga0137379_110400541	3300012209	Vadose Zone Soil	MSVRRSLIPLALAFCAIAAAVSCGDPSPVGVAIAPPAFQRGGRGWYYTSGPGLVPCTQTYDSVTQVIGPAGGLIAVGHHYLWVDSMALSDTVSITAVAPADTVRWVRF
Ga0137378_101149791	3300012210	Vadose Zone Soil	MNSEDRMFVRRSLIPLALAVCATAAAVSCRDPSPVGVAIPAPSFQQGGRWTIPGTKGAGLVACLQTYDSVTQVIGPAGGLIAVGHHYLWVDSMALSDTVSITAVAPADTVRW
Ga0137378_111212261	3300012210	Vadose Zone Soil	MHSEDRMSVRRSLIPLALAVCATAAALSCGDPSPVGLEAPAVPQAIRWSSPATKGSGLVACLQTYDSVTQVVGPAGGLIAVGHHYLWVDSMALSDTVSITAV
Ga0137378_117176112	3300012210	Vadose Zone Soil	MSVRRSLIPLALAACATAAAMSCGDPSPVGVDLRAPALLASKWGPTVTKTSGLVACAQTYDSVTQVVGPAGGLIAVGHHYLWVDSMALSDTVSITAVA
Ga0137377_100764424	3300012211	Vadose Zone Soil	MNSEDRMFVRRSLIPLALAVCATAAAVSCRDPSPVGVAIPAPSFQQGGRWTIPGTKGAGLVACLQTYDSVTQVIGPAGGLIAVGHHFLWVDSMALSDTVSITAVAPADTVRWVRFQPDGLRF
Ga0137377_112673202	3300012211	Vadose Zone Soil	MSVRRSLIALAWAVCATAAALSCGDPSPVGVDPQAPAFEHGGTWTVPETKGSGLVACSQTYDSVTQVIGPAGGLIAVGRHFLWVDSMALSDTVRI
Ga0137377_112947112	3300012211	Vadose Zone Soil	MHSEDRMSVRRSLISLALAVCATASAVSCGDPSPVGVAIPAPAFQRGGRGWFYTSGPGLVPCTQTYDSVTQVIGPAGGLIAVGHHYLWVDSM
Ga0137377_113009492	3300012211	Vadose Zone Soil	MSVRRSLIPLALAFCAIAAAVSCGDPSPVGVAIAPPAFQRGGRGWYYTSGPGLVPCTQTYDSVTQVIGPAGGLIAVGHHYLWVDSM
Ga0137370_106852781	3300012285	Vadose Zone Soil	MSVRRSLIPLALAACATAAAVSCGDSSPVGVDPQAPAFQQGGKWTLPETKGSGLVACSQAYDSVTQVIGPAGGLIAVGSHFLWVDSMALSDT
Ga0137367_102391321	3300012353	Vadose Zone Soil	MNSENRTFVRRFLFPFALAVCATAAALSCRDASPVGVDLRAPALLASKWGPTVTKTSGLVACAQTYDSVTQVIGPAGGLIAVGHHYFWVDSMALSDTVSITAV
Ga0137367_107201202	3300012353	Vadose Zone Soil	MDPEDGMSLRRALIPLALLATLAVAASCGDPSPTGVAAFQRGGKWAPGSSPKGAGLVACPQGYDSVTQVIGPAGGLIAVGSHFLWVDTMAL
Ga0137384_106952912	3300012357	Vadose Zone Soil	MNSEDRMFVRRSLIPLALAVCAPAAAVSCRDPSPVGVAIPAPSFQQGGHWTIPGTKGAGLVACLQTYDSVTQVIGPAGGLIAVGHHYLWVDSMALSDTVSITAVAPAD
Ga0137368_107613991	3300012358	Vadose Zone Soil	MDPEDGMSLRRALIPLALLATLAVAASCGDRSPTGVAAFQRGGKWSQQPTKGVGLVACAQTYDSSTQVIGPAGGLIAVGNHFLWVDTMALSDTV
Ga0137385_101294633	3300012359	Vadose Zone Soil	MDSKARMSVRRSLIPLALAACATAAAVSCGGPSPVGVDPQTPALQEGSRWALPQTKGSGLIACSQTYDSVTQVIGPAGGLIAVGRHVLWVDSMALRDTVRITAVAPADTVRWVRFHPDGLQFR
Ga0137385_114892981	3300012359	Vadose Zone Soil	MSVRRSLIPLALAFCAIAAAVSCGDPSPVGVAIAPPAFQRGGRGWYYTSGPGLVPCTQTYDSVTQVIGPAGGLIAVGHHYLWVDSMALSDTVSITA
Ga0137407_110389241	3300012930	Vadose Zone Soil	MSVRRSLIPLAWAVCATAAALSCRDPSPVGVDLQAPTVQASRWKPTVTKGSGLVACAQTYDSVTRVIGPAGGLIAVGHHFLWVDSMALRDTVSITAVAPADTVRW
Ga0134077_102106761	3300012972	Grasslands Soil	MDSEDRMFVRRSLIPLALAVCATAAAVSCGDPSPVGVDLRAPAYLQASRRAPLSTKGYGLVACTQSYDSVTQVIGPAGGLIAVGHHYLWVDSMALSDTVSITAVAPVDT
Ga0134110_100140884	3300012975	Grasslands Soil	MSVRRSLIQLALAACATAAAVSCRDPSPVGVDIQAPAVQASGWRPTVTTESGLVPCAQTYDSVTQVIGPAGGLIAVGRHFLWVDSMALRDTVRITAVA
Ga0134110_100975073	3300012975	Grasslands Soil	MDSENRMSVRRSLIPLALAICATAAAVSCGDPSPLGVAFPAPAFQRGGRWTPHDTTGAGLVACLQTYDSVTQVIGPAGGLIAVGHHYLWVDSMALSDTV
Ga0134076_102685522	3300012976	Grasslands Soil	MDSKARMSVRRFLIPLALAACVIAAAVSCGGPSPVGVDAQTPVLQEGSRWALPQTQGSGLVACSQTYDSVTQVIGPAGGLIAVGRHFL*
Ga0134076_104181772	3300012976	Grasslands Soil	MDSEDRMFVRRSLIPLALAFCATAAAVSCGDPSPVGVAIPAPAFQRGGRGWFYTSGSGLVSCTQTYDSVTQVIGPAGGLIAVGHHYLWVDSMALSDTVRITAVAPA
Ga0134075_102049891	3300014154	Grasslands Soil	MDSKARMSVRRSLIPLALAACVIAAAVSCGGPSPVGVDAQTPVLQEGSRWALPQTKGSGLVACSQTYDSVTQVIGPAGGLIAVGRHFLW
Ga0134073_101850742	3300015356	Grasslands Soil	MDSETRVSVRRSLIPLALAACATAAAVSCGGPSPVGVDLQAPALPEAARQTLPATKGFGLVACSQTYDSVTQVIGPAGGLIVVGHHFLWVDSMALSDTVRITAVAPA
Ga0134089_102101922	3300015358	Grasslands Soil	MDSKARMSVRRSLIPLALAACATAAAVSCGGPSPVGVDPQTPALQQASRWAVPQTKGSGLVACSQTYDSVTQVIGPAGGLIAVGRHFLWVDSMALSDTVRITAVAPAD
Ga0134085_104016121	3300015359	Grasslands Soil	MNSKARMSVRRSLIQIALAACATAAAVGCGDPSPVGVDIQAPAVQASRWRPTVTKGSGLVACAQTYDSVTQVIGPAGGVIAVGRHFLWVDSMALSDTVSITAVAPADTV
Ga0134085_105036612	3300015359	Grasslands Soil	MSVRRSLIPLALAICATAAAVSCGDPSPLGVAFPAPAFQRGGRWTPHDTTGAGLVACLQTYDSVTQVIGPAGGLIAVGHHYLWVDSMALSD
Ga0134085_106075502	3300015359	Grasslands Soil	MHSEDRMSVRRSLIPLALAVCATAAAVSCRDPSPLGVAIPAPSFQQGGRWTLPGTKGAGLVACLQTYDSVTQVIGPAGGLIAVGHHYLWVDSMALSDTVSIT
Ga0134112_100675443	3300017656	Grasslands Soil	MDSKARMSVRRSLIPLALAACVIAAAVSCGGPSPVGVDAQTPVLQEGSRWALPQTQGSGLVACSQTYDSVTQVIGPAGGLIAVGRHFLWVDSMALSDTVSITA
Ga0134074_12946281	3300017657	Grasslands Soil	MDSKARMSVRRFLIPLALAACVIAAAVSCGGPSPVGVDAQTPVLQEGSRWALPQTQGSGLVACSQTYDSVTQVIGPAGGLIAVGRHFLWVDSMALSDTVSITAVAPA
Ga0184621_100277373	3300018054	Groundwater Sediment	MNSENRISLRRSLIPFVLLAAMAAAAGCADPSPMGVPAFERGGRWTGATKKGAGLVACSQTYDSVTQVVGPAGGLIAVGHHYLWVDSAALADTVSITAVAPADSVRWV
Ga0184609_105348841	3300018076	Groundwater Sediment	MNSENRISLRRSLIPFVLLAAMAAAAGCADPSPMGVPAFERGGRWTGATKKGAGLVACSQTYDSVTQVVGPAGGLIAVGHHYLWVDSA
Ga0184643_14666292	3300019255	Groundwater Sediment	MELENRVALRRSLIPLALLAALAVAASCADPSPTGVPAFQRGGRWNSGQSKKGARLVPCLQTYDSVTQVIGPAGGLIAVGHHYLWVDSAALAD
Ga0193705_10037255	3300019869	Soil	MALRRALIPLALLAALTVVASCGDPSPTGVPAFQRGGRWTGLTKKGAGLVTCSQTYDSVTQVVGPAGGLIAVGHHYLWAIPLRSRTR
Ga0179594_100946321	3300020170	Vadose Zone Soil	MNSENRMSIRRSLIPLALVAAMAVAASCADPSPMGIPAFEQGGRWAGGTKKGASLVTCSQTYDSVTQVVGPAGGLMHVGHHYLWVDSAALADTVSI
Ga0210379_103798612	3300021081	Groundwater Sediment	MPIRRSLILPVLLAAAIAAVASCADPSPTGVPAFQRGGRWTNWKKGSGLVTCSQTYDSVTQVVGPAGGLIAVGHHYLWVDSMALSDTVSITAVAPADTVRW
Ga0224452_11417011	3300022534	Groundwater Sediment	MELENRVALRRSLIPLALLAALAVAASCADPSPTGVPAFQKGGRWANSPSTKRPGLVACTQTYDSVTQVIGPAGGLIAVGHHFLWVDTMALADTVRITAV
Ga0209235_12549241	3300026296	Grasslands Soil	MHSEDRMSVRRSLIPLALAVCATAAAVSCRDPSPVGVDIQAPAVQASRWRPTVTKGSGLVACAQTYDSVTQVIGPAGGLIAIGHHFLWVDSMALSDTVS
Ga0209237_10182925	3300026297	Grasslands Soil	MDSENRMSLRRSLIPLALAACATAAALSCGDPSPVGVDVPMPAFQQGGRWTLPASKGASLVACSQTYDSVTQVIGPAGGLIAVGHHFLWVDSTALGDTVSITAVA
Ga0209469_10385743	3300026307	Soil	MAFRRSLMPLALLAALAATSSCTDPSPLGVPAFRRGGRGQEGSTKGTGLLACSQTYDSVTQVVGPAGGFIVVGSHILWVDTMALADTVRITAVAPA
Ga0209268_10826752	3300026314	Soil	MDSETRMSVRRSLIPLALAACATAAAVSCRDPSPVGVDIQAPAVQASGWRPTVTTGSGLVPCAQTYDSVTQVIGPAGGLIAVGRHFLWVDSMALRDTVRITAVA
Ga0209154_12863591	3300026317	Soil	MHSEDRMSVRRSLIPLALAVCATAAAVSCGDPSPVGVDLRAPAYLQASRRAPLPTKGYGLVACAQTYDSVTQVIGPAGGLIAVGHHFLWVDSMALSDTVSITAVAPADTVRWVRFQPDGLRFQTNG
Ga0209266_10963363	3300026327	Soil	MDSEDRMFVRRSLIPLALAVCATAAAVSCRDPSPLGVAIPAPSFQQGGRWTLPGTKGAGLVACLQTYDSVTQVIGPAGGLIAVGHHYLWVDSMALSDTVSITA
Ga0209375_13008722	3300026329	Soil	MNLENRMPLRRTLIPLMLLGALAAAASCADPSPMGVPAFQRGGKWSPPPTNGVGLVTCSQTYDSVTQVIGPAGGLIAVGNHFLWVDTMALSDTVSITAVAPADTVRWV
Ga0209808_11704521	3300026523	Soil	MDSETRMSVRRSLIQLALAACATAAAVSCRDPSPVGVDIQAPAVQASGWRPTVTTESGLVPCAQTYDSVTQVIGPAGGLIAVGRHFLWVDSMALRDTVRITAVAPADTVRWVRFRPDGLRFRTN
Ga0209058_12120251	3300026536	Soil	MDSKARMSVRRFLIPLALAACVIAAAVSCGGPSPVGVDAQTPVLQEGSRWALPQTQGSGLVACSQTYDSVTQVIGPAGGLIAVGRHFLWVDSMALSDTVSITAVAPADTVRWVRFRPDG
Ga0209488_112058952	3300027903	Vadose Zone Soil	MNSENRMSIRRSLIPFALAFCATAAAVSCGDPSPVGVAIPAPAFQRGGRAALYGSGLVSCLQTYDSVTQVIGPAGGLIAVGHHYLWVDSMALSDTVSITAVAPADTVRWVRFQPDGLQFRTNGA
Ga0307317_101716672	3300028720	Soil	MALRRALIPLALLAALTVVASCGDPSPTGVPAFQRGGRWTGLTKKGAGLVTCSQTYDSVTQVVGPAGGLIAVGHHYLWVDSAALADTVSITAVAPAGTVRWVRFQPDG
Ga0307302_101282652	3300028814	Soil	MQSENRMSVRRSLIPFTLLAGAIAALSCGDPSPVGVDLQAPAFQKGGRWDTPLPTGSGLVPCSQGYDSVTQVIGPAGGLIAVGSHFLWVDSMALSDPVSITAVAPAGTA
Ga0307302_105503401	3300028814	Soil	MHSENRMALRRSLIPLAILAALAATSSCTDPSPLGVPEFRRGGSGQGGSTKGTGVVACSQTYDSVTQVIGPAGGFLLVGSHILWVDTMALTEPVRITAVAPADTVRWVR
Ga0308194_101175792	3300031421	Soil	MTTRNGMSLRRSLIPLALLATMAAASCADPSPMGVPAFQRGGRWTGQTKKGAGLVACSQTYDSVTQVVGPAGGLLHVGHHYLWVDSAALADTVSITAVAPAD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F100870

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences