Metagenome / Metatranscriptome Family F100861

Basic Information
Family ID	F100861
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	81 residues
Representative Sequence	MEWEFETKSTLANEVDLEMQHVITICDYGTCPTIKSNNAINMIFVVKFGGNLCSSEARRNRGDDNYYEPLENRAVGALLQ
Number of Associated Samples	75
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	33.33 %
% of genes near scaffold ends (potentially truncated)	3.92 %
% of genes from short scaffolds (< 2000 bps)	5.88 %
Associated GOLD sequencing projects	65
AlphaFold2 3D model prediction	No

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (93.137 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (41.176 % of family members)
Environment Ontology (ENVO)	Unclassified (71.569 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (71.569 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 13.75% β-sheet: 30.00% Coil/Unstructured: 56.25%
Feature Viewer

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Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF00005	ABC_tran	51.96
PF00106	adh_short	18.63
PF12698	ABC2_membrane_3	4.90
PF13561	adh_short_C2	3.92
PF03972	MmgE_PrpD	1.96
PF02163	Peptidase_M50	1.96
PF13977	TetR_C_6	1.96
PF00440	TetR_N	1.96
PF13175	AAA_15	0.98
PF00490	ALAD	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG2079	2-methylcitrate dehydratase PrpD	Carbohydrate transport and metabolism [G]	1.96
COG0113	Delta-aminolevulinic acid dehydratase, porphobilinogen synthase	Coenzyme transport and metabolism [H]	0.98

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.14 %
All Organisms	root	All Organisms	6.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.14 %
cellular organisms	root	All Organisms → cellular organisms	6.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.14 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	6.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.14 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.98 %

Visualization

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Scaffold	Taxonomy	Length	IMG/M Link
3300002562\|JGI25382J37095_10004324	All Organisms → cellular organisms → Archaea	4917	Open in IMG/M
3300005167\|Ga0066672_10199506	Not Available	1274	Open in IMG/M
3300005174\|Ga0066680_10011519	All Organisms → cellular organisms → Archaea	4565	Open in IMG/M
3300005554\|Ga0066661_10305002	Not Available	980	Open in IMG/M
3300010096\|Ga0127473_1018952	All Organisms → cellular organisms → Archaea	613	Open in IMG/M
3300012199\|Ga0137383_10208645	Not Available	1431	Open in IMG/M
3300026313\|Ga0209761_1012886	All Organisms → cellular organisms → Archaea → Euryarchaeota	5407	Open in IMG/M
3300026318\|Ga0209471_1043176	All Organisms → cellular organisms → Archaea	2129	Open in IMG/M
3300026326\|Ga0209801_1019685	All Organisms → cellular organisms → Archaea	3329	Open in IMG/M
3300026332\|Ga0209803_1111103	Not Available	1109	Open in IMG/M
3300026335\|Ga0209804_1001937	All Organisms → cellular organisms → Archaea	12920	Open in IMG/M
3300026529\|Ga0209806_1099165	Not Available	1247	Open in IMG/M

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	100.00%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	55.88%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	44.12%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	41.18%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	28.43%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	15.69%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	14.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002909	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300010085	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010096	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010099	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010104	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010108	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010895	Grasslands soil microbial communities from Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012395	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012405	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25385J37094_100911432	3300002558	Grasslands Soil	MEWEFETKSTLANEVDLSMEYVITLCDHGTCPTIKSNNAINMIFVVKFGGNLCSSEAGRNSGDHNYYEPFENCAVGVSLE*
JGI25385J37094_101245491	3300002558	Grasslands Soil	DSPFLACSKMNWNRSMEWEFETKSTLVNAVDLEMQHVITICDYGTCPTIKSNNAVNMIFVVKFGGNLCSSEARRNRGDDNYYERLENRAVGALLQ*
JGI25382J37095_100043242	3300002562	Grasslands Soil	MNWNRSMEWEFETKSTLVNAVDLEMQHVITICDYGTCPTIKSNNAVNMIFVVKFGGNLCSSEARRNRGDDNYYERLENRAVGALLQ*
JGI25382J43887_100436622	3300002908	Grasslands Soil	MNWNRSMEWEFETKSTLANEVDLSMEYVITLCDYGTCPTIKSNNAINMIFVVKFGGNLCSSEAGRNSGDHNYYEPFENCAVGVSLE*
JGI25388J43891_10032834	3300002909	Grasslands Soil	MNWNRSMEWEFETKSTPANEVDLEMQHVITICDYGTCPTIKSNNAINMIFVVKFGGNSCSSEARRDRRDDNYYEPLENRAVGALLQ*
Ga0066674_100528853	3300005166	Soil	ANEVDLEMQHVITICDYGTCPTIKSNNAINMIFVVKFGGNSCSSEARRDRRDDNYYEPLENRAVGALLQ*
Ga0066674_101061792	3300005166	Soil	MSWNRSIEWEFEMKSTLANEVDLSMEYVITLCDYGTCPTIKSNYAINTIVVVKFGGNLRSSEAGRNSGDHNYFEPFENCAVGVLLE*
Ga0066674_102112192	3300005166	Soil	MNWNRSIEWEFETKSTLANKVDLEMQHVITICDYGTCPTIKSNNAINMIFVVKFGGNLCSSEARRNRGDDNYYEPLENRAVEALLQ*
Ga0066674_104795231	3300005166	Soil	EWEFETKSTLANEVDLEMQHVITICDYGTCPTIKSNNAINVIFVVKFGGNLCSSEARRNRGDDNYYEPLENRAVEALTQ*
Ga0066672_101995062	3300005167	Soil	MNWNRSMEWEFETKNTLANEVDLSMEYVITLCDYGTCPTIKSNNIIKTMILVKSDGNLHSIETRTKCSDISHYEPLENRTLGVRLQ*
Ga0066672_102442901	3300005167	Soil	MKWDFETKSTLANEVDLSMEYVITLCDYGTCPTIKSNNAIKTIIVVKSDGNLHPIKAGTNHSDNNHYEPLENRTLGVRLQ*
Ga0066672_107800972	3300005167	Soil	MNWNRSMKWDFETKSTLANEVDLAMQHVITICDYGTCPTIKSNNAIKTMIVVKSDGNLHSIEARTNLIDNNHYEPLENRTLGVRLQ*
Ga0066683_103728322	3300005172	Soil	WEFETKSTLANEVDLEMQHVITICDYGTCPTIKSNNAINIIFVVKFGGNSCSSEARRNRGDDNYYEPLENRAVGALLQ*
Ga0066683_106971831	3300005172	Soil	WEFETKSTLANEVDLEMQHVITICDYGTCPTIKSNNAINMIFVVKFGGNLCSSEARRNRGDDNYYEPLENRAVEALLQ*
Ga0066680_100115195	3300005174	Soil	MNWNRSTKCDFETKSTLTNEVDLAMQHVITTRDYGTCPTIKSNNAIKTMIVVKSDGNSHSIETRTNYSDSNHNEPLESRTLGMPLQ*
Ga0066680_101565722	3300005174	Soil	MNWNRSMEWEFETKSTLANEVDLEMQHVITICDYGTCPTIKSNNAINTIVVVKFGGNLCSSEARRNRGDDNYYEPLENRAVEALLQ*
Ga0066685_104983902	3300005180	Soil	ANEVDLEMQHVITICDYGTCPTIKSNNAINMIFVVKFGGNLCSSEARRNRGDDNYYEPLENRAVEALLQ*
Ga0066678_101858052	3300005181	Soil	MEWEFETKSTLANEVDLEMQHVITICDYGTCPTIKSNNVINMIFVVKFGGNLCSSEARRNRGDDNYYEPLENRAVGALPQ*
Ga0066686_102435632	3300005446	Soil	MSWNRSIEWEFEMKSTLANEVDLSMEYVITLCDYGTCPTIKSNYAINTIVVVKFGGNLRSSEAGRNSGDHNYFEPFENCAVGV
Ga0066689_104787392	3300005447	Soil	MGIRDESTLANEVDLEMQHVITVCDYGTCPTIKSNNAINTIVVVKFGGNLRSSEAGRNSCDHNYYEPFENCAVGVLPE*
Ga0066682_109024262	3300005450	Soil	VDLEMQHVITICDYGTCPTIKSNNAINMIFVVKFGGNLCSSEARRNRGDDNYYEPLENRAVEALLQ*
Ga0066701_103602561	3300005552	Soil	MEWEFETKSTLANEVDLEMQHVITICDYGTCPTIKSNNAINTIVVVKFGGNLCSSEARRNRGDDNYYEPLENRAVEALLQ*
Ga0066701_109503862	3300005552	Soil	MGIRDESTLANEVDLEMQHVITVCDYGTCPTIKSNNAINTIVVVKFGGNLRSSEAGRNSGDHNYYEPFENCAVGVSLE*
Ga0066661_103050021	3300005554	Soil	MNWNRSTKCDFETKSTLTNEVDIAMQHVITTRDYGTCPTIKSNNAIKTMIVVKSDGNSHSIETRTNYSDSNHNEPLESRTLGMPLQ*
Ga0066707_100075664	3300005556	Soil	MEWEFDTKSTLANEVDLSMECVITLCDYGTCPTIKSNNAINMIFVVKFGGNLCSSEARRNRGDDNYYEPLENRAVGALLQ*
Ga0066707_105638421	3300005556	Soil	MECEFETKSTLGNEVDLKMGHVTTICDYGTCPTIKSNNAINTIVVAKFGGNLRSCEAGRNSGDHNYYEPFENCAVGV
Ga0066707_109980222	3300005556	Soil	MNDPHLDGVDLVAQRFVITLCDYGTCPTIKSNNAINTIVVVKFGGNLRSSEAGRNSGDHNYYEPFENCAVGVVLE*
Ga0066698_103021322	3300005558	Soil	MKSTLANEVDLSMEYVITLCDYGTCPTIKSNYAINTIVVVKFGGNLRSSEAGRNSGDHNYFEPFENCAVGVLLE*
Ga0066700_102714062	3300005559	Soil	MECEFETKSTLGNEVDLKMGHVTTICDYGTCPTIKSNNAINTIVVAKFGGNLRSCEAGRNSGDHNYYEPFENCAVGVLLE*
Ga0066656_101776422	3300006034	Soil	MEWEFETKSTLANEVDLEMQHVITICDYGTCPTIKSNNAINMIFVVKFGGNSCSSEARRDRRDDNYYEPLENRAVGALLQ*
Ga0066653_103217652	3300006791	Soil	MEWEFETKSTPANEVDLEMQHVITICDYGTCPTIKSNNAINMIFVVKFGGNSCSSEARRDRRDDNYYEPLENRAVGALLQ*
Ga0066659_114067192	3300006797	Soil	MECEFETKSTLGNEVDLNMGHVITICDYGTCPTIKSNNAINTIVVVKFGGNLRSSEAGRNSGDHNYYEPFENCAVGVLLE*
Ga0099793_100813082	3300007258	Vadose Zone Soil	MEWEFETKSTLANEVDLSMEYVITLCDYGTCPTIKSNNAINMIFVVKFGGNLRSSEAGRNSGDHNYYEPFENCAVGVSLE*
Ga0066710_1033353382	3300009012	Grasslands Soil	ANEVDLEMQHVITICDYGTCPTIKSNNAINMIFVVKFGGNLCSSEARRNRGDDNYYEPLENRAVEALLQ
Ga0066710_1042839022	3300009012	Grasslands Soil	ANEVDLEMQHVITICDYGTCPTIKSNNAINTIVVVKFGGNLCSSEARRNRGDDNYYEPLENRAVEALLQ
Ga0066710_1046590201	3300009012	Grasslands Soil	VDLEMQHVITICDYGTCPTIKSNNAINMIFVVKFGGNLCSSEARRNRGDDNYYEPLENRAVEALLQ
Ga0127445_10295882	3300010085	Grasslands Soil	MEWEFETKSTLANKVDLEMQHVITICDYGTCPTIKSNNAINMIFVVKFGGNLCSSEARRNRGDDNYYEPLENRAVEALLQ*
Ga0127473_10189522	3300010096	Grasslands Soil	MKWDFETKSTLANEVDLSMEYVITLCDYGTCPTIKSNNIIKTMIVVKSDGNLHSIETRTKCSDISHYEPLENRTLGIRLQ*
Ga0127450_10174692	3300010099	Grasslands Soil	MNWNRSIEWEFETKSTLANKVDLEMQHVITICDYGTCPTIKSNNAINMIFVVKFGGNLCSSEARRNRGDDNYYEPLENRAVGALLQ*
Ga0127446_10818982	3300010104	Grasslands Soil	MEWEFETKSTLANEVDLEMQHVITICDYGTCPTIKSNNAIKTMIVVKSDGNFHSIETRTNHSDSNHNEPLENRTLGVPLQ*
Ga0127474_10492233	3300010108	Grasslands Soil	MKWDFETKSTLANEVDLSMEYVITLCDYGTCPTIKSNNAIKTIIVVKSDGNLHPIKAGTNHSDNNHYDPLENRTLGVRLQ*
Ga0134070_100157831	3300010301	Grasslands Soil	EVDLEMQHVITICDYGTCPTIKSNNAINMIFVVKFGGNLCSSEARRNRGDDNYYEPLENRAVEALLQ*
Ga0134070_100257822	3300010301	Grasslands Soil	MEWEFETKSTLANEVDLEMQHVITICDYGTCPTIKSNNAINMIFVVKFGGNLCSSEARRNRGDDNYYEPLENRAVGALLQ*
Ga0134082_101568622	3300010303	Grasslands Soil	MKWDFETKSTLANEVDLSMEYVITLCDYGTCPTIKSNNAIKTIIVVKSDGNLHPIKAGTNHSDNNHYEPFENCAVGVLLE*
Ga0134111_100412252	3300010329	Grasslands Soil	MNWNRSIEWEFETKSTLANEVDLEMQHVITICDYGTCPTIKSNNAINMIFVVKFGGNLCSSEARRNRGDDNYYEPLENRAVGALLQ*
Ga0134062_106789182	3300010337	Grasslands Soil	MNWNRSMEWEFETKSTPANEVDLEMQHVITICDYGTCPTIKSNNAINMIFVVKFGGNSCSSEARRDRRDDNYYEPLE
Ga0138113_1426742	3300010895	Grasslands Soil	MEWEFETKSTLANEVDLEMQHVITICDYGTCPTIKSNNAINMIFVVKFGGNLCSSEARRNRGDDNYYEPLENRAVEALLQ*
Ga0137364_107778582	3300012198	Vadose Zone Soil	MEWEFETKSTLANEVDLSMEYVITLCDYGTCPTIKSNNAINTIVVVKFGGNLRSSEARRNRGDDNYYEPLETRAVEVLLQ*
Ga0137364_113199491	3300012198	Vadose Zone Soil	ETKSTLANEVDLEMQHVITICDYGTCPTIKSNNAINTIVVVKFGGNLCSSEARRDRGDDNYYEPLENRALGALLQ*
Ga0137383_102086451	3300012199	Vadose Zone Soil	MNWNRSMKCDFETKSTLTNEVDLAMQHVITTRDYGTCPTIKSNNAIKTMIVVKSDGNSHSIETRTNYSDSNHNEPLESRTLGMPLQ
Ga0137383_105982792	3300012199	Vadose Zone Soil	MEWEFDTKSTLANEVDLSMECVITLCDYGTCPTIKSNNAINTIVVVKFGGNLRSSEAGRNSGDHDYYEPFENCAVGVLLE*
Ga0137383_111864052	3300012199	Vadose Zone Soil	MEWEFETKSTLANEVDLKMQHVITICDYGTCPTIKSNNTINMIFVVKFGGNLCSSEARRNRGDDNYYEPLENRAVGALLQ*
Ga0137383_113668771	3300012199	Vadose Zone Soil	MNWNRSMEWEFETKSTLANEVDLEMQHVITICDYGTCPTIKSNNAINTIVVVKFRGNSCSSEARRNRGDDNYYEPLENRAVGALLQ*
Ga0137365_109893512	3300012201	Vadose Zone Soil	MEWEFETKSTLANEVDLEMQQVITICDYGTCPTIKSNNEINMIFVVKFGGNLCSFEARRNRGDDNYYEPLENRAVEALLQ*
Ga0137362_105031612	3300012205	Vadose Zone Soil	MEWEFETKSTLANEVDLEMQHVITICDYGTCPTIKSNNVINMIFVVKFGGNLCSSEARRNRGDDNYYEPHENRAVGALLQ*
Ga0137380_106757402	3300012206	Vadose Zone Soil	RSMEWEFETKSTLANEVDLEMQHVITICDYGTCPTIKSNNAINTIVVVKFGGNSCSSEARRNRGDDNYYEPLENRAVGALLQ*
Ga0137381_110741632	3300012207	Vadose Zone Soil	MNWNSSMEWEFETKSTLANEVDLEMQHVITICDYGTCPTIKSNNAINTIVVVKFGGNLCSSEARRNRGHDNYYEPLENRAVGALLQ*
Ga0137381_110743632	3300012207	Vadose Zone Soil	MSWNRSIEWEFETKSTLANEVDLSMEYVITLCDYGTCPTIKSNNAINTIVVVKFGGNLRSSEAGRNSGDHDYYEPFENCAVGVLLE*
Ga0137376_103776622	3300012208	Vadose Zone Soil	DSPFLACSKMNWNRSMEWEFETKSTLANEVDLEMQHVITIYDYGTCPTIKSNHAINMIFVVKFGGNLYSSEARRNRGDDNYYEPLENRAVGALLQ*
Ga0137379_114196502	3300012209	Vadose Zone Soil	MEWEFETKSTLANEVDLEMQHVITICDYGTCPTIKSNNAINMIFLVKFGGNLYSSEARRNRGDDNYYEPLENRAVEALLQ*
Ga0137379_115522541	3300012209	Vadose Zone Soil	RKTDSPFLACSKMNWNRSMEWEFETKSTLANEVDLEMQQVITICDYGTCPTIKSNNEINMIFVVKFGGNLCSFEARRNRGDDNYYEPLENRAVEALLQ*
Ga0137379_115704142	3300012209	Vadose Zone Soil	VSEKTDSAFLACSKMNWNRSMEWEFETKSTLANEVDLKMQHVITICDYGTCPTIKSNNTINMIFVVKFGGNLCSSEARRNRGDDNYYEPLENRAVGALLQ*
Ga0137387_109968032	3300012349	Vadose Zone Soil	MEWEFETKSTLANEVDLSMEYVITLCDYGTCPTIKSNNAINTIVVVKFGGNLRSSEAGRNSGDHDYYEPFENCAVGVLLE*
Ga0137386_109193981	3300012351	Vadose Zone Soil	MEWEFETKSTLANEVDLEMQHVITICDYGTCPTIKSNNAINMIFLVKFGGNLYSSEAQRNRGDDNYYEPLENRAVEALLQ*
Ga0137366_110809772	3300012354	Vadose Zone Soil	MNWNRSMEWEFDTKSTLANEVDLSMECVITLCDYGTCPTIKSNNAINTIVVVKFGGNLRSSEAGRNSGDHDYYEPFENCAVGVLLE*
Ga0137369_102748002	3300012355	Vadose Zone Soil	MEWEFETKSTLANEVDLEMQQVITICDYGTCPTIKSNHAINMIFVVKFGGNLYSSEARRNRGDDNYYEPLENRAVEALLQ*
Ga0137371_112199561	3300012356	Vadose Zone Soil	MEWEFETKSTLANEVDLEMQHVITICDYGTCPTIKSNNAINMIFLVKFGENLYSSEARRNRGDDNYYEPLENRAVEALLQ*
Ga0137384_106104992	3300012357	Vadose Zone Soil	MEWEFETKSTLANEVDLEMQHVITICDYGTCPTIKSNNAINTIVVVKFRGNSCSSEARRNRGDDNYYEPLENRAVGALLQ*
Ga0137385_106074481	3300012359	Vadose Zone Soil	AFLACSKMNWNRSMEWEFETKSTLANEVDLKMQHVITICDYGTCPTIKSNNTINMIFVVKFGGNLCSSEARRNRGDDNYYEPLENRAVGALLQ*
Ga0137385_109932881	3300012359	Vadose Zone Soil	MSWNRSIEWEFETKSTLANEVDLSMEYVITLCDYGTCPTIKSNNAINTIVVVKFGGNLRSSEARRNRGDDNYYEPLENRAVEALLQ*
Ga0137385_115198632	3300012359	Vadose Zone Soil	MEWEFETKSTLANEVDLSMEYVITLCDHGTCPTIKSNNAINMIFVVKFGGNLCSSEAGRNSGDHNYYEPFENCAVGVLLE*
Ga0137361_106835951	3300012362	Vadose Zone Soil	KMNWNRSMEWEFETKSTLANEVDLEMQHVITICDYGTCPTIKSNNVINMIFVVKFGGNLCSSEARRNRGDDNYYEPLENRAVGALPQ*
Ga0134044_10189841	3300012395	Grasslands Soil	MNWNRSMEWEFETKSTPANEVDLEMQHVITICDYGTCPTIKSNNAINMIFVVKFGGNLCSSEARRNRGDDNY
Ga0134041_13956312	3300012405	Grasslands Soil	WEFETKSTPANEVDLEMQHVITICDYGTCPTIKSNNAINMIFVVKFGGNLCSSEARRNRGDDNYYEPLENRAVEALLQ*
Ga0137416_102356852	3300012927	Vadose Zone Soil	MEWEFETKSTLANEVDLEMQHVITICDYGTCPTIKSNSAINMIFVVKFDGNLCSSEARRNRGDDNYYEPLENRAVGALLQ*
Ga0134087_100697892	3300012977	Grasslands Soil	MEWEFETKSTLANEVDLEMQHVITICDYGTCPTIKSNNAINMIFVVKFGGNLRSSEARRNRGDDNYYEPLENRAVEALLQ*
Ga0134081_100608781	3300014150	Grasslands Soil	MEWEFETKSTPANEVDLEMQHVITICDYGTCPTIKSNNAINMIFVVKFGGNSCSSEARRDRRDDNYYEPLENRSVGDARQ*
Ga0134112_102864571	3300017656	Grasslands Soil	FETKSTLANEVDLEMQHVITICDYGTCPTIKSNNAINIIFVVKFGGNSCSSEARRDRRDDNYYEPLENRAVGALLQ
Ga0066655_100667972	3300018431	Grasslands Soil	MSWNRSIEWEFEMKSTLANEVDLSMEYVITLCDYGTCPTIKSNYAINTIVVVKFGGNLRSSEAGRNSGDHNYFEPFENCAVGVLLE
Ga0066667_118877321	3300018433	Grasslands Soil	FLACSKMNWNRSMEWEFETKSTLANKVDLEMQHVITICDYGTCPTIKSNNAINMIFVVKFGGNLCSSEARRNRGDDNYYEPLENRAVGALLQ
Ga0066662_100084212	3300018468	Grasslands Soil	MEWEFETKSTLANEVDLEMQHVITICDYATCPTIKSNNEINMIFVVKFGGNLCSSEARRNRGDDNYYEPLENRAVEALLQ
Ga0209234_10900182	3300026295	Grasslands Soil	MEWEFETKSTLANEVDLEMQHVITICDYGTCPTIKSNNAINTIVVVKFGGNLCSSEARRNRGDDNYYEPLENRAVEALLQ
Ga0209237_10372142	3300026297	Grasslands Soil	MEWEFETKSTLVNAVDLEMQHVITICDYGTCPTIKSNNAVNMIFVVKFGGNLCSSEARRNRGDDNYYERLENRAVGALLQ
Ga0209469_10034647	3300026307	Soil	MNWNRSIEWEFETKSTLANKVDLEMQHVITICDYGTCPTIKSNNAINMIFVVKFGGNLCSSEARRNRGDDNYYEPLENRAVEALLQ
Ga0209469_11052272	3300026307	Soil	MEWEFETKSTLANEVDLEMQHVITICDYGTCPTIKSNNAINVIFVVKFGGNLCSSEARRNRGDDNYYEPLENRAVEALTQ
Ga0209055_10239233	3300026309	Soil	MKWDFETKSTLANEVDLSMEYVITLCDYGTCPTIKSNNAIKTIIVVKSDGNLHPIKAGTNHSDNNHYEPLENRTLGVRLQ
Ga0209239_100040013	3300026310	Grasslands Soil	MEWEFETKSTPANEVDLEMQHVITICDYGTCPTIKSNNAINMIFVVKFGGNSCSSEARRDRRDDNYYEPLENRAVGALLQ
Ga0209761_10128865	3300026313	Grasslands Soil	MNWNRSMEWEFETKSTLANEVDLEMQHVITICDYGTCPTIKSNNVINMIFVVKFGGNLCSSEARRNRGDDNYYEPLENRAVGALPQ
Ga0209471_10431763	3300026318	Soil	MNWNRSTKCDFETKSTLTNEVDLAMQHVITTRDYGTCPTIKSNNAIKTMIVVKSDGNSHSIETRTNYSDSNHNEPLESRTLGMPLQ
Ga0209801_10196854	3300026326	Soil	MEWEFETKNTLANEVDLSMEYVITLCDYGTCPTIKSNNIIKTMILVKSDGNLHSIETRTKCSDISHYEPLENRTLGVRLQ
Ga0209801_10361592	3300026326	Soil	MEWEFETKSTLANEVDLEMQHVITICDYGTCPTIKSNNVINMIFVVKFGGNLCSSEARRNRGDDNYYEPLENRAVGALPQ
Ga0209801_13301862	3300026326	Soil	MNWNRSSEWEFETKSTLANEVDLEMRHVITRCDYGTCPTIKSNNAINTIIVVKFGGNLRLSEARRNSGDHNYYEPLENRAVGALLQ
Ga0209375_10316764	3300026329	Soil	MKSTLANEVDLSMEYVITLCDYGTCPTIKSNYAINTIVVVKFGGNLRSSEAGRNSGDHNYFEPFENCAVGVLLE
Ga0209803_10160062	3300026332	Soil	MGIRDESTLANEVDLEMQHVITVCDYGTCPTIKSNNAINTIVVVKFGGNLRSSEAGRNSCDHNYYEPFENCAVGVLPE
Ga0209803_11111031	3300026332	Soil	MEWEFETKNTLANEVDLSMEYVITLCDYGTCPTIKSNNIIKTMILVKSDGNLHSIETRTKCSDISHYEPLENRTL
Ga0209804_100193714	3300026335	Soil	MKWDFETKSTLANEVDLAMQHVITICDYGTCPTIKSNNAIKTMIVVKSDGNLHSIEARTNLIDNNHYEPLENRTLGVRLQ
Ga0209159_10145982	3300026343	Soil	MEWEFETKSTLANEVDLEMQHVITICDYGTCPTIKSNNAINMIFVVKFGGNLCSSEARRNRGDDNYYEPLENRAVEALLQ
Ga0209378_10082635	3300026528	Soil	MEWEFDTKSTLANEVDLSMECVITLCDYGTCPTIKSNNAINMIFVVKFGGNLCSSEARRNRGDDNYYEPLENRAVGALLQ
Ga0209806_10991651	3300026529	Soil	MNWNRSMEWEFETKNTLANEVDLSMEYVITLCDYGTCPTIKSNNIIKTMILVKSDGNLHSIETRTKCSDISHYEPLENRTLGV
Ga0209376_10138854	3300026540	Soil	MNWNRSMEWEFETKSTPANEVDLEMQHVITICDYGTCPTIKSNNAINMIFVVKFGGNSCSSEARRDRRDDNYYEPLENRAVGALLQ
Ga0209076_11219272	3300027643	Vadose Zone Soil	MEWEFETKSTLANEVDLSMEYVITLCDYGTCPTIKSNNAINMIFVVKFGGNLRSSEAGRNSGDHNYYEPFENCAVGVSLE
Ga0137415_100913574	3300028536	Vadose Zone Soil	MNWNRSMEWEFETKSTLANEVDLEMQHVITICDYGTCPTIKSNNAINMIFVVKFDGNLCSSEARRNRGDDNYYEPLENRAVGALLQ

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F100861

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences