Metagenome / Metatranscriptome Family F100855

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F100855
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	115 residues
Representative Sequence	AGVVLVSVGCLRIISAIYYFADSTRVNNLSGGAFGHHLFLWGLWDLLIALLALWGGFSLFGGNTFGRVIGYIWAILVIIQSFLILGAAPWFGFSALLLATLVLVALSATSGWRETA
Number of Associated Samples	89
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	46.08 %
% of genes near scaffold ends (potentially truncated)	68.63 %
% of genes from short scaffolds (< 2000 bps)	91.18 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.74

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (25.490 % of family members)
Environment Ontology (ENVO)	Unclassified (28.431 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.922 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 63.19% β-sheet: 0.00% Coil/Unstructured: 36.81%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.74
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.74
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SCOP family	SCOP domain	Representative PDB	TM-score
a.29.13.1: Bacillus cereus metalloprotein-like	d3dbya2	3dby	0.75408
a.184.1.1: TorD-like	d2xola1	2xol	0.73992
a.29.16.1: IVS-encoded protein-like	d2rlda1	2rld	0.7221
a.29.13.1: Bacillus cereus metalloprotein-like	d3dbya1	3dby	0.71708
a.29.13.1: Bacillus cereus metalloprotein-like	d3d19a1	3d19	0.71558

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF10009	DUF2252	10.78
PF12697	Abhydrolase_6	4.90
PF07885	Ion_trans_2	3.92
PF08448	PAS_4	1.96
PF00884	Sulfatase	1.96
PF13738	Pyr_redox_3	1.96
PF02322	Cyt_bd_oxida_II	0.98
PF00196	GerE	0.98
PF02535	Zip	0.98
PF01544	CorA	0.98
PF00857	Isochorismatase	0.98
PF00561	Abhydrolase_1	0.98
PF02073	Peptidase_M29	0.98
PF03706	LPG_synthase_TM	0.98
PF13031	DUF3892	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0392	Predicted membrane flippase AglD2/YbhN, UPF0104 family	Cell wall/membrane/envelope biogenesis [M]	0.98
COG0428	Zinc transporter ZupT	Inorganic ion transport and metabolism [P]	0.98
COG0598	Mg2+ and Co2+ transporter CorA	Inorganic ion transport and metabolism [P]	0.98
COG1294	Cytochrome bd-type quinol oxidase, subunit 2	Energy production and conversion [C]	0.98
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.98
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.98
COG2309	Leucyl aminopeptidase (aminopeptidase T)	Amino acid transport and metabolism [E]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	88.24 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	88.24 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	71.57 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.98 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	61.76 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	2.94 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.96 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.96 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.98 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.98 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.98 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	61.76 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	2.94 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.96 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.96 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	0.98 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.98 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.98 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	61.76 %
Couchioplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes	2.94 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.96 %
Solirubrobacterales bacterium URHD0059	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	0.98 %
Microbacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium	0.98 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.98 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.98 %
Saccharopolyspora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora	0.98 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	61.76 %
Couchioplanes caeruleus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	2.94 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.96 %
Microbacterium yannicii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → Microbacterium yannicii	0.98 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.98 %
Saccharopolyspora spinosa	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora spinosa	0.98 %
Pseudonocardia asaccharolytica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia asaccharolytica	0.98 %
Solirubrobacterales bacterium URHD0059	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	0.98 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	61.76 %
Couchioplanes caeruleus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	2.94 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.96 %
Streptomyces sp. CNH287	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. CNH287	0.98 %
Microbacterium yannicii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → Microbacterium yannicii	0.98 %
Saccharopolyspora spinosa	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora spinosa	0.98 %
Pseudonocardia asaccharolytica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia asaccharolytica	0.98 %
Solirubrobacterales bacterium URHD0059	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	0.98 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig128343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	704	Open in IMG/M
2124908045\|KansclcFeb2_ConsensusfromContig859253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia asaccharolytica	502	Open in IMG/M
2199352025\|deepsgr__Contig_163981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2637	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0614167	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_11113861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1044	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105518323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	925	Open in IMG/M
3300002909\|JGI25388J43891_1046832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	648	Open in IMG/M
3300004114\|Ga0062593_100567906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1072	Open in IMG/M
3300004114\|Ga0062593_101442051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	738	Open in IMG/M
3300004156\|Ga0062589_100446791	All Organisms → cellular organisms → Bacteria	1069	Open in IMG/M
3300004157\|Ga0062590_100566646	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	988	Open in IMG/M
3300004463\|Ga0063356_105960303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. CNH287	523	Open in IMG/M
3300004479\|Ga0062595_100275330	All Organisms → cellular organisms → Bacteria	1114	Open in IMG/M
3300004479\|Ga0062595_101872388	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300004480\|Ga0062592_100370136	All Organisms → cellular organisms → Bacteria	1124	Open in IMG/M
3300004643\|Ga0062591_100395981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1139	Open in IMG/M
3300005093\|Ga0062594_100945345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	821	Open in IMG/M
3300005167\|Ga0066672_10441564	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300005337\|Ga0070682_100747132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	789	Open in IMG/M
3300005457\|Ga0070662_100369512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1178	Open in IMG/M
3300005468\|Ga0070707_101174575	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora spinosa	734	Open in IMG/M
3300005526\|Ga0073909_10003332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4737	Open in IMG/M
3300005526\|Ga0073909_10109967	All Organisms → cellular organisms → Bacteria	1102	Open in IMG/M
3300005535\|Ga0070684_100793051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	885	Open in IMG/M
3300005568\|Ga0066703_10661249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → Microbacterium yannicii	604	Open in IMG/M
3300005578\|Ga0068854_102259694	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300005764\|Ga0066903_102083140	All Organisms → cellular organisms → Bacteria	1092	Open in IMG/M
3300005764\|Ga0066903_106483970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	610	Open in IMG/M
3300006046\|Ga0066652_100653484	All Organisms → cellular organisms → Bacteria	997	Open in IMG/M
3300006059\|Ga0075017_100628474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	822	Open in IMG/M
3300006791\|Ga0066653_10472982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	637	Open in IMG/M
3300006800\|Ga0066660_10435854	All Organisms → cellular organisms → Bacteria	1091	Open in IMG/M
3300006914\|Ga0075436_100723435	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	738	Open in IMG/M
3300009092\|Ga0105250_10480770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	561	Open in IMG/M
3300009100\|Ga0075418_12152386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	608	Open in IMG/M
3300009137\|Ga0066709_100392687	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1922	Open in IMG/M
3300010045\|Ga0126311_10330028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1157	Open in IMG/M
3300010154\|Ga0127503_10380024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1369	Open in IMG/M
3300010154\|Ga0127503_10446798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	776	Open in IMG/M
3300010333\|Ga0134080_10573705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	545	Open in IMG/M
3300010375\|Ga0105239_10474463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1421	Open in IMG/M
3300012200\|Ga0137382_10905046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	636	Open in IMG/M
3300012201\|Ga0137365_10106944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2105	Open in IMG/M
3300012201\|Ga0137365_11173004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	550	Open in IMG/M
3300012285\|Ga0137370_10773081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	596	Open in IMG/M
3300012355\|Ga0137369_11140853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	506	Open in IMG/M
3300012362\|Ga0137361_10194717	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1831	Open in IMG/M
3300012376\|Ga0134032_1200538	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	504	Open in IMG/M
3300012502\|Ga0157347_1029351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	682	Open in IMG/M
3300012515\|Ga0157338_1012256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	894	Open in IMG/M
3300012582\|Ga0137358_10445085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	875	Open in IMG/M
3300012895\|Ga0157309_10302795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	540	Open in IMG/M
3300012958\|Ga0164299_10264276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	1036	Open in IMG/M
3300012960\|Ga0164301_10415090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	946	Open in IMG/M
3300012985\|Ga0164308_10827814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	809	Open in IMG/M
3300012985\|Ga0164308_12022523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	537	Open in IMG/M
3300012986\|Ga0164304_10482574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	901	Open in IMG/M
3300012989\|Ga0164305_10035298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2790	Open in IMG/M
3300012989\|Ga0164305_10264307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1251	Open in IMG/M
3300012989\|Ga0164305_10478838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	974	Open in IMG/M
3300014326\|Ga0157380_13110988	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	529	Open in IMG/M
3300015372\|Ga0132256_100953258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	974	Open in IMG/M
3300015373\|Ga0132257_104326353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	517	Open in IMG/M
3300017792\|Ga0163161_10112455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2037	Open in IMG/M
3300018073\|Ga0184624_10174449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	953	Open in IMG/M
3300018081\|Ga0184625_10093747	All Organisms → cellular organisms → Bacteria	1545	Open in IMG/M
3300018482\|Ga0066669_11668029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	584	Open in IMG/M
3300019867\|Ga0193704_1075625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	625	Open in IMG/M
3300019869\|Ga0193705_1100334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	529	Open in IMG/M
3300019881\|Ga0193707_1053565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1281	Open in IMG/M
3300020004\|Ga0193755_1073320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1103	Open in IMG/M
3300021445\|Ga0182009_10177958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1025	Open in IMG/M
3300025906\|Ga0207699_10615972	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	791	Open in IMG/M
3300025910\|Ga0207684_11031014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	687	Open in IMG/M
3300025928\|Ga0207700_11591417	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	578	Open in IMG/M
3300025937\|Ga0207669_10338587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1158	Open in IMG/M
3300025981\|Ga0207640_11857260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	545	Open in IMG/M
3300026552\|Ga0209577_10070923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2887	Open in IMG/M
3300027821\|Ga0209811_10102658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1029	Open in IMG/M
3300027821\|Ga0209811_10139175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	894	Open in IMG/M
3300028381\|Ga0268264_12199465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	559	Open in IMG/M
3300028589\|Ga0247818_10806271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	656	Open in IMG/M
3300028711\|Ga0307293_10198623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	638	Open in IMG/M
3300028755\|Ga0307316_10103110	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	997	Open in IMG/M
3300028771\|Ga0307320_10117039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1020	Open in IMG/M
3300028771\|Ga0307320_10331122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	607	Open in IMG/M
3300028809\|Ga0247824_10554512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	685	Open in IMG/M
3300028814\|Ga0307302_10120006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1263	Open in IMG/M
3300028824\|Ga0307310_10113515	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1217	Open in IMG/M
3300028875\|Ga0307289_10353137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	605	Open in IMG/M
3300028878\|Ga0307278_10351350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	650	Open in IMG/M
3300028881\|Ga0307277_10048781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1723	Open in IMG/M
3300030973\|Ga0075395_10042987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	1207	Open in IMG/M
3300031226\|Ga0307497_10002771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4515	Open in IMG/M
3300031226\|Ga0307497_10014511	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2313	Open in IMG/M
3300031231\|Ga0170824_115308303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3350	Open in IMG/M
3300031421\|Ga0308194_10060094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	998	Open in IMG/M
3300031446\|Ga0170820_10572768	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1587	Open in IMG/M
3300031939\|Ga0308174_10906015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	745	Open in IMG/M
3300032066\|Ga0318514_10398653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	730	Open in IMG/M
3300032074\|Ga0308173_10672276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	944	Open in IMG/M
3300034680\|Ga0370541_059067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	516	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.31%
Host-Associated	Host-Associated	15.69%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.41%
Plants	Host-Associated → Plants	15.69%
Aquatic	Environmental → Aquatic	4.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.41%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.84%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.86%
Sediment	Environmental → Aquatic → Sediment	2.94%
Freshwater	Environmental → Aquatic → Freshwater	1.96%
Roots	Host-Associated → Plants → Roots	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	71.57%
Loam	Environmental → Terrestrial → Soil → Loam	7.84%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.94%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.94%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.98%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	41.18%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	13.73%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.92%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.94%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	25.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	8.82%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.86%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.94%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.96%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.96%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.96%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.96%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.98%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.98%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Arabidopsis Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002909	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012376	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012502	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.yng.040610	Host-Associated	Open in IMG/M
3300012515	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.7.yng.070610	Host-Associated	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012895	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300030973	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB6 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300034680	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_116 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_04611400	2124908045	Soil	MSTDPVSALERPGWLTFSAVVLFAVGCLRILSALYYFADSARVNNLSAGAFGDNLFLWGLWDLGIAVLALWAGYSLLGGNTFGRVIGYAWGVLVIVQSFMILEYAPWFGFASLLVAMLVIFALSATSEWRQSPSAMA
KansclcFeb2_02562520	2124908045	Soil	SGGEPRMSTSRMSTPNMSTLERPGWLTFAAVVMFSVGFLRIISAIYYFADSNRVANVSAGALGDNLFLWGLWDLIVAALALWAGYSLLSGNTFGRVIGYIWAIVVIVQSFLIIQYAPWYGAATLTLAVLVV
deepsgr_02736180	2199352025	Soil	MSTDPMSALERPGWLTFSAVVLFAVGCMRILSALYYFADSARVNNLSAGAFGDNIFLWGLWDLGNRGARAVGRLLTARRQHLRTRIGYAWGVLVIVQSFMILEYAPWFGFASLLIAMLVIFALSATSEWKQSPSTMA
ICChiseqgaiiDRAFT_06141672	3300000033	Soil	MSTDPVSALERPGWLTFSAVVLFAVGCLRILSALYYFADSARVNNLSAGAFGDNLFLWGLWDLGIAVLALWAGYSLLGGNTFGRVIGYAWGVLVIVQSFMILEYAPWFGFASLXVAMXVIFALSATSEWRQSPSAMA*
ICChiseqgaiiFebDRAFT_111138611	3300000363	Soil	SARVNNLSAGAFGDNLFLWGLWDLGIAVLAIWGGYSLLSGNTFGRVVGYAWGVLVIIQSFAILEYAPWFGFASLLVAMLVIFALSATSEWKAID*
INPhiseqgaiiFebDRAFT_1055183232	3300000364	Soil	MSTQVFEGLRRPGWLTFAAIVLISVGCVRXISAIYYFADSTRVNNLSAGAFGHHLFLWGLWDLLIAGLALLGGFSLFGGNIFGRIIGYTWAIVVIVQSFLIFSVAPWYAFSAMLLAILVLGALASTSGWREAA*
JGI25388J43891_10468321	3300002909	Grasslands Soil	MSTQALDGLRRPGWLTFAAVILVSVGFLRIISAIYYFADSSRVNNLSGGAFGSHLFLWGLWDLLIALLALWGGFSLFGGNTFGRVIGYTWASLVIVQSFLILSLAPWFGSAALF
Ga0062593_1005679061	3300004114	Soil	NLFLWGLWDLVIAGLALWGGSSLLSGNTFGRIIGYAWGVLVIVQSFMIISYAPWFGFAALLLAMLVIMAISATSDWREAT*
Ga0062593_1014420511	3300004114	Soil	LMSTEAMSGLRRPGWLTFAAVVLISVGFLRILSAIYYFADSARVVNLTGGAFGGNLFLWGLWDLVIAGLALWGGMSLLSGNTFGRVIGYAWGVLVIVQSFMIISYAPWFGFAALIIAMLVILAISSTSDWREPV*
Ga0062589_1004467912	3300004156	Soil	MSTEAMSGLRRPGWLTFAAVVLISVGFLRILSAIYYFADSARVVNLTGGAFGGNLFLWGLWDLVIAGLALWGGMSLLSGNTFGRVIGYAWGVLVIVQSFMIISYAPWFGFAALIIAMLVILAISSTSDWREPV*
Ga0062590_1005666462	3300004157	Soil	MVVRHTHPFTHEEALMSTEAMSGLRRPGWLTFAAVVLISVGFLRILSAIYYFADSARVVNLTGGAFGGNLFLWGLWDLVIAGLALWGGMSLLSGNTFGRVIGYAWGVLVIVQSFMIISYAPWFGFAALIIAMLVILAISSTSDWREPV*
Ga0063356_1059603031	3300004463	Arabidopsis Thaliana Rhizosphere	LSALYYFADSARVNNLSAGAFGDNLFLWGLWDLGIAVLALWAGYSLLGGNTFGRVIGYAWGVLVIVQSFMILEYAPWFGFASLIVAMIVIFALSATSEWRQSPSAMA*
Ga0062595_1002753302	3300004479	Soil	MSTDPVSALERPGWLTFSAVVLFAVGCLRILSALYYFADSARVNNLSAGAFGDNLFLWGLWDLGIAVLALWAGYSLLGGNTFGRVIGYAWGVLVIVQSFMILEYAPWFGFASLIVAMIVIFALSATSEWRQSPSAMA*
Ga0062595_1018723882	3300004479	Soil	GDHLFLWGIWDLAIAGLAFWAGWSLLGGHMLGRVLGYLWAGVVIVQSFLILGYSPWFGFGALILAVLVIYALSSTSDYKETSPGTV*
Ga0062592_1003701361	3300004480	Soil	MSTQVFEGLRRPGWLTFAAIVLISVGCVRIISAIYYFADSTRVNNLSAGAFGHHLFLWGLWDLLIAGLALLGGFSLFGGNIFGRIIGYTWAIVVIVQSFLIFSVAPWYAFSALLLAVLVLGAIASTSGWREAA*
Ga0062591_1003959812	3300004643	Soil	MSTQAFEGLRRPGWLTFAAIVLISVGCVRVISAIYYFADSTRVNNLSAGAFGHHLFLWGLWDLLIAGLALLGGFSLFGGNIFGRIIGYTWAIVVIVQSFLIFSVAPWYAFSALLLAILVLGALASTSGWREAA*
Ga0062594_1009453451	3300005093	Soil	ALMSTEAMSGLRRPGWLTFAAVVLISVGFLRILSAIYYFADSARVVNLTGGAFGGNLFLWGLWDLVIAGLALWGGMSLLSGNTFGRVIGYAWGVLVIVQSFMIISYAPWFGFAALIIAMLVILAISSTSDWREPV*
Ga0066672_104415643	3300005167	Soil	HHLFLWGLWDLLIALLALWGGFSLFGGNTFGRVIGYIWAILVIIQSFLILGAAPWFGFSALLLATLVLVALSATSGWRETA*
Ga0070682_1007471321	3300005337	Corn Rhizosphere	MSTQAFEGLRRPGWLTFAAIVLISVGCVRVISAIYYFADSTRVNNLSAGAFGHHLFLWGLWDLLIAGLALLGGFSLFGGNIFGRIIGYTWAIVVIVQSFLIFSVAPWYAFSALLLAVLVLGALASTSGWREAA*
Ga0070662_1003695122	3300005457	Corn Rhizosphere	MSTTQAYSGLNRPGWLTFAAVVLFASGFLRIISAIYYFADSARVTSVSNGALGDHLFLWGLWDALIAVLAIWAAYSLLSGDTFGRVVGYIWAINVIIQSFLIIEYAPWFGFGALLLAT
Ga0070707_1011745751	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MSTQAFEGLRRPGWLTFAAIVLISVGCVRVISAIYYFADSTRVNNLSAGAFGHHLFLWGLWDLLIAGLALLGGFSLFGGNIFGRIIGYTWAIVVIVQSFLIFSVAPWYAFSALLLAVLVLGALASTSGWREA
Ga0073909_100033323	3300005526	Surface Soil	MSTDPMSALERPGWLTFSAVVLFAVGCLRILSALYYFADSARVNNLSAGAFGDNLFLWGLWDLLIAVLALWAGYSLLGGNTFGRVIGYAWGVLVIVQSFMIIEYAPWFGFGSLLIAMLVIFALSATSDWKQSPTTTA*
Ga0073909_101099671	3300005526	Surface Soil	MSTDPMSALERPGWLTFSAVVLFAVGCLRILSALYYFADSAKVNNLSAGAFGDNLFLWGIWDLGIAVLALWAGYSLLSGNTFGRVIGYAWGVLVIVQSFMIISYAPWFGFGSLLVAMLVIFALSATSEWRESPSTMA*
Ga0070684_1007930511	3300005535	Corn Rhizosphere	LGIAALALWGGYSLLAGKTVGRTIGYVWAVVVLVQGFLVLAYAPWYGFGAILLAVFVIYALSSTSDWSEPR*
Ga0066703_106612491	3300005568	Soil	MSTQALDGLRRPGWLTFAGVVLVSVGFARIISAIYYFADSTRVNNLSGGAFGHHLFLWGLWDLLIALLALWGGFSLFGGNSFGRVIGYTWGILVIVQSFLLFSSAPWFA
Ga0068854_1022596941	3300005578	Corn Rhizosphere	ISAIYYFADSARVTNVSNGALGDHLFLWGLWDALIAVLAIWAAYSLLSGDTFGRVVGYIWAINVIIQSFLIIEYAPWFGFGALLLATLVIYALSSTSDYREAPPV*
Ga0066903_1020831402	3300005764	Tropical Forest Soil	MSSHAVPGDSSSSMVDSLNRPGWLTFAAIVLFSVGFMRVISAIYYFADSNRVNNLTFGAFGSHLFLWGIWDLVIALLAVWAGWSLLQGETFGRVIGYGWAIIVIVQSFTIISYAPWFAFASLVLALFVIYGLSVAGDWRSPEPAAL*
Ga0066903_1064839702	3300005764	Tropical Forest Soil	MSSHAVPGDSSSSMVDSLNRPGWLTFAAILLFAFGFMRVISAIYYFADSTRVNNLTFGAFGSHLFLWGIWDLVIALLAIWGGWSLLQGDTFGRVIGYAWAIIVIVQSFTIISYAPWFAFASLILALFVIYGLSVARDWHAPEPAAL*
Ga0066652_1006534841	3300006046	Soil	SSRVNNLSGGAFGNHLFLWGLWDLLIALLALWGGFSLFGGNTFGRVIGYAWAVLVIVQSFLILSFAPWFGFSALLLAILVMIALSATSGWRETA*
Ga0075017_1006284742	3300006059	Watersheds	MSTQAMEGLRRPGWLTFVAVVLISVGCLRVISAIYYFANSARINNLSYGAFGHHLFVWGLWDALIAVLALWGGWSLLNGNNTFGRIIGYIWGGLVLIQSFMILGSSPWFGFAAMILAILVLYGLAVTSGGEASTA*
Ga0066653_104729821	3300006791	Soil	MSSRPGSSSALSALSRPGWLTFAAIVMFAFGCLRLISAIYYFADSARVNNVTLGAFGGHLFLWGIWDLVIAGLAFWAAWSLLGGYVFGRVIGYLWAGFVIVQSFLILAYAPWFGFASMILATLVIYALSLTSGWEDARASTA*
Ga0066660_104358541	3300006800	Soil	FADSTRVNNLSGGAFGHHLFLWGLWDLLIALLALWGGFSLFGGNTFGRVIGYIWAILVIIQSFLILGAAPWFGFSALLLATLVLVALSATSGWRETA*
Ga0075436_1007234352	3300006914	Populus Rhizosphere	MSTTQAYSGLNRPGWLTFAAVVMFSVGILRIISALYYFADSVRVANVTAGAFSDHLFLWGLWDLVIAVLAIWGGYSLLAGNTFGRVIGYIWAILVIVQSFLIIEYAPWFGFGAI
Ga0105250_104807701	3300009092	Switchgrass Rhizosphere	IISAIYYFADSARVTSVSNGALGDHLFLWGLWDALIAVLAIWAAYSLLSGDTFGRVVGYIWAINVIIQSFLIIEYAPWFGFGALLLATLVIYALSSTSDYREAPPV*
Ga0075418_121523861	3300009100	Populus Rhizosphere	MSTTQAYSGLNRPGWLTFAAVVMFSVGILRIISALYYFADSVRVANVTAGAFSDHLFLWGLWDLVIAVLAIWGGYSLLAGSTFGRVIGYIWAILVIVQSFLIIEYAPWFGFGAI
Ga0066709_1003926873	3300009137	Grasslands Soil	GCLRIISAIYYFADSTRVNNLSGGAFGHHLFLWGLWDLLIALLALWGGFSLFGGNTFGRVIGYIWSILVIIQSFLILGAAPWFGFSALLLATLVLVALSATSGWRETA*
Ga0126311_103300281	3300010045	Serpentine Soil	SLSAIYYFADSARVVNVSNGALGGHLFLWGLWDLVIAVLALSAGYSLLSGNTYGRVIGYIWAIVVIVQSFLIIEYAPWFGFGTLLLAILVVYALSASSEWRETPV*
Ga0127503_103800242	3300010154	Soil	VGCFRVISAIYYFADSVRILNVSGGAFGGHVFLWGLWDLLIAALALGGGYSLLSGNTYGRVIGYAWAVLVIVQSFLLISYAPWFGFSAMLLAILVLIALSATSDWRAAA*
Ga0127503_104467981	3300010154	Soil	ISEEREATLSTEALSGLRRPGWLTFAAIVLISVGCFRIISAIYYFAHSVRILNVSGGAFGGHVFLWGLWDLLIAALALGGGYSLLSGNTYGRIIGYAWAVVVIVQSFSLISYAPWYGFSALLLAILVLIALSATSDWRAAA*
Ga0134080_105737051	3300010333	Grasslands Soil	NNLGTGAFGHHLFLWGLWDLAIGVLALWAGYSLLQGATFGRVVAYLWAGLVIIQSFLTIGQAPWFSFAAMLLAILVIYSISVSVDYGAPDM*
Ga0105239_104744632	3300010375	Corn Rhizosphere	LFASGFLRIISAIYYFADSARVTSVSNGALGDHLFLWGLWDALIAVLAIWAAYSLLSGDTFGRVVGYIWAINVIIQSFLIIEYAPWFGFGALLLATLVIYALSSTSDYREAPPV*
Ga0137382_109050462	3300012200	Vadose Zone Soil	VNNLSGGAFGHHLFLWGLWDLLIALLALWGGFSLFGGNTFGRVIGYIWAILVIIQSFLILGAAPWFGFSALLLATLVLVALSATSGWRETA*
Ga0137365_101069441	3300012201	Vadose Zone Soil	NNVSGGAFGHHLFLWGLWDLLIALLALWGGFSLLGGNTFGRVNGYTWAVLVIVQSFLILGYAPWFGFGALLLAIFVVYALSATSDWREPV*
Ga0137365_111730041	3300012201	Vadose Zone Soil	LFSVGFLRVISAIYYFADSTRVNNLTVGAFGTHLFLWGLWDLLIALLAFWGGFSLLSGNMFGRVLGYIWATIVIVQSFLILGYAPWFGFAALLLAIFVIYALSATSEWRESSV*
Ga0137370_107730812	3300012285	Vadose Zone Soil	ADSSRVNNLSGGAFGNHLFLWGLWDLLIALLALWGGFSLFGGNTFGRVIGYAWAVLVIVQSFLILSFAPWFGFSALLLAILVMIALSATSGWRETA*
Ga0137369_111408531	3300012355	Vadose Zone Soil	LDPISEEGEDISTKALDGLRRPGWLTFAAVILVSVGFLRIISAIYYFADSSRVNNLSGGAFGSHLFLWGLWDLLIALLALWGGFSLFGGNTFGRVIGYTWASLVIVQSFLILSLAPWFGSAALFLAVLVIHALS
Ga0137361_101947171	3300012362	Vadose Zone Soil	MSTQALDGLRRPGWLTFAGVVLVSVGFARIISAIYYFADSTRVNNLSGGAFGHHLFLWGLWDLLIALLALWGGFSLFGGNTFGRVIGYTWGILVIVQSFLLFSSAPWFASAALLIAVLV
Ga0134032_12005381	3300012376	Grasslands Soil	STRVNNLSGGAFGHHLFLWGLWDLLIALLALWGGFSLFGGNTFGRVIGYIWAILVIIQSFLILGAAPWFGFSALLLATLVLVALSATSGWRETA*
Ga0157347_10293511	3300012502	Arabidopsis Rhizosphere	MSTTQAYSGLNRPGWLTFAAVVMFSVGILRIISALYYFADSTRVANLTAGAAGDHLFLWGLWDLVIAVLALWGGYSLLAGNTFGRVIGYVWAIVVIVQSFLIIEYAPWFG
Ga0157338_10122561	3300012515	Arabidopsis Rhizosphere	GDHLFLWGLWDLVIAVLALWGGYSLLAGNTFGRVIGYVWAIVVIVQSFLIIEYAPWFGFGAIVLAIFVVYALSTTSDWREPAM*
Ga0137358_104450852	3300012582	Vadose Zone Soil	MSTQALDGLRRPGWLTFAGVVLVSVGFARIISAIYYFADSTRVNNLSGGAFGHHLFLWGLWDLLIALLALWGGFSLFGGNTFGRVIGYTWGILVIVQSFLLFSSAPWFA
Ga0157309_103027952	3300012895	Soil	WLTFAAVVLFAVGILRFISAIYYFADSSRIADVSHGALGDNLFLWGLWDAIIAILALWAGYSLLANGSFGRVVAYIWAALVIVNSFLVIGYAPWFAFAMIALAIFVIYGLTSSPRELTE*
Ga0164299_102642761	3300012958	Soil	MSTQAFEGLRRPGWLTFAAIVLISVGCVRVISAIYYFADSTRVNNLSAGAFGHHLFLWGLWDLLIAGLALLGGFSLFGGNIFGRIIGYTWAIVVIVQSFLIFSVAPWYAFSALLLAILVLGAIASTSGWREAA*
Ga0164301_104150901	3300012960	Soil	RVISAIYYFADSTRVNNLSAGAFGHHLFLWGLWDLLIAGLALLGGFSLFGGNIFGRIIGYTWAIVVIVQSFLIFSVAPWYAFSALLLAILVLGALASTSGWREAA*
Ga0164308_108278141	3300012985	Soil	LVRARRGFSGKSKREATMSTTQAYSGLNRPGWLTFAAVTLFAVGFLRSLSAIYYFADSARVVNVSAGALGGHLFLWGLWDLVIALLAFSAGYSLLSGNTFGRVIGYMWAIVVIVQSFLIIEYAP*
Ga0164308_120225231	3300012985	Soil	YYFSDSNKVNNLTGGAFGDHLFWWGIWDLLIAALAFWGGYSLLGGNTFGRVIAYAWAVLVIVQSFMVLGYAPWFGFAAILLAILVMCALSATSDWRASPSAPS*
Ga0164304_104825742	3300012986	Soil	VILFSVGCLRVISAIYYFSDSNKVNNLTGGAFGDHLFWWGIWDLLIAALAFWGGYSLLGGNTFGRVIAYAWAVLVIVQSFMVLGYAPWFGFAAILLAILVMCALSATSDWRASPGAPS*
Ga0164305_100352986	3300012989	Soil	MSEQALAGLRRPGWLTFAAVILFSVGCLRVISAIYYFSDSNKVNNLTGGAFGDHLFWWGIWDLLIAALAFWGGYSLLGGNTFGRVIAYAWAVLVIVQSFMVLGYAPWFGFAAILL
Ga0164305_102643071	3300012989	Soil	HHLFLWGLWDLLIAGLALLGGFSLFGGNIFGRIIGYTWAIVVIVQSFLIFSVAPWYAFSALLLAILVLGALASTSGWREAA*
Ga0164305_104788382	3300012989	Soil	MSTQAFEGLRRPGWLTFAAIVLISVGCVRVISAIYYFADSTRVNNLSAGAFGHHLFLWGLWDLLIAGLALLGGFSLFGGNIFGRIIGYTWAIVVIVQSFLIFSVAPWYAFSALLLAILVL
Ga0157380_131109881	3300014326	Switchgrass Rhizosphere	MSTTQAYSGLNRPGWLTFAAVVLFASGFLRAISAIYYFADSARVANVSAGALGDHLFLWGLWDALIAVLAIWAAYSLLSGDTFGRVVGYIWAINVIIQSFLIIEYAPWFGFGALILGQILLTQ
Ga0132256_1009532581	3300015372	Arabidopsis Rhizosphere	LWGLWDLAIAALALWAGWSLLGGNTFGRIVGYIWAGVVIINGFLMLSWAPWYGIASLLLAVFVMYALSATSDWQNSRST*
Ga0132257_1043263531	3300015373	Arabidopsis Rhizosphere	LTRGALGDNLFLWGLWDLAIAALALWAGWSLLGGNTFGRIVGYIWAGVVIINGFLMLSWAPWYGIASLLLAVFVMYALSATSDWQNSRST*
Ga0163161_101124553	3300017792	Switchgrass Rhizosphere	LRIISAIYYFADSARVTSVSNGALGDHLFLWGLWDALIAVLAIWAAYSLLSGDTFGRVVGYIWAINVIIQSFLIIEYAPWFGFGALLLATLVIYALSSTSDYREAPPV
Ga0184624_101744492	3300018073	Groundwater Sediment	MSTDPVSALERPGWLTFSAVVLFAVGCLRILSALYYFADSARVNNLSAGAFGDNLFLWGLWDLGIAVLALWAGYSLLGGNTFGRVIGYAWGVLVIVQSFMILEYAPWFGFASLLVAMLVIFALSATSEWRQSPSAMS
Ga0184625_100937473	3300018081	Groundwater Sediment	YYFADSARVNNLSAGALGDNLFLWGLWDLGIAVLALWAGYSLLGGNTFGRVIGYAWGVLVIVQSFMILEYAPWFGFASLLVAMLVIFALSATSEWRQSPSAMA
Ga0066669_116680291	3300018482	Grasslands Soil	ISALYYFADSARIADVRAGALGNHLFLWGLWDAVIAVLALWAAYSLLGGNIFGRLLGYIWAIVVIVESFLLLAYAPWYGFGTLILSTLVIYALSSTSEWRQTPT
Ga0193704_10756252	3300019867	Soil	ISAIYYFADSARVTNVSNGALGDHLFLWGLWDALIAVLAIWAAYSLLSGDTFGRVIGYIWAINVIIQSFLIIEYAPWFGFGALILATLVIYALSSTSDYREAPPV
Ga0193705_11003341	3300019869	Soil	TNVSNGALGDHLFLWGLWDALIAVLAIWAAYSLLSGDTFGRVVGYIWAINVIIQSFLIIEYAPWFGFGALLLATLVIYALSSTSDYREAPPV
Ga0193707_10535653	3300019881	Soil	MSTQALDGLRRPGWLTFAGVVLVSVGFARIISAIYYFADSARVNNLSGGAFGGHIFLWGIWDLLIALLALWGGFSLFGGNTFGRVIGYTWAILVIVQSFLIISSAPWFGSAALLIAVLVVYALSSTSGWREQPA
Ga0193755_10733202	3300020004	Soil	MSTQALDGLRRPGWLTFAGVVLVSVGFARIISAIYYFADSASGHHLFLWGLWDLLIALLALWGGFSLFGGNTFGRVIGYTWAILVIVQSFLIISSAPWFGSAALLIAVLVVYALSSTSGWREQPA
Ga0182009_101779582	3300021445	Soil	MTTEAYAGLRRPGWLTFAAVVMFAVGILRLIAAIYYFADSSRVASVTNGAFGDHLFLWGLWDLVIAVLAFWAGYSLLGGHTFGRVIGYIWAIAVIVESFMLLEQAPWYGFAGLILATLVVYALSTTSEWRETSTAT
Ga0207699_106159722	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MSTQAFEGLRRPGWLTFAAIVLISVGCVRVISAIYYFADSTRVNNLSAGAFGHHLFLWGLWDLLIAGLALLGGFSLFGGNIFGRIIGYTWAIVVIVQSFLIFSVAPWYAFSALLLAILVLGALASTSG
Ga0207684_110310142	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	GLRRPGWLTFAAIVLISVGCVRVISAIYYFADSTRVNNLSAGAFGHHLFLWGLWDLLIAGLALLGGFSLFGGNIFGRIIGYTWAIVVIVQSFLIFSVAPWYAFSALLLAVLVLGALASTSGWREAA
Ga0207700_115914171	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VNNLSAGAFGHHLFLWGLWDLLIAGLALLGGFSLFGGNIFGRIIGYTWAIVVIVQSFLIFSVAPWYAFSALLLAILVLGALASTSGWREAA
Ga0207669_103385872	3300025937	Miscanthus Rhizosphere	ADSARVANVSAGALGDHLFLWGLWDALIAVLAIWAAYSLLSGDTFGRVVGYIWAINVIIQSFLIIEYAPWFGFGALLLATLVIYALSSTSDYREAPPV
Ga0207640_118572602	3300025981	Corn Rhizosphere	SGFLRAISAIYYFADSARVTNVSNGALGDHLFLWGLWDALIAVLAIWAAYSLLSGDTFGRVVGYIWAINVIIQSFLIIEYAPWFGFGALLLATLVIYALSSTSDYREAPPV
Ga0209577_100709234	3300026552	Soil	AGVVLVSVGCLRIISAIYYFADSTRVNNLSGGAFGHHLFLWGLWDLLIALLALWGGFSLFGGNTFGRVIGYIWAILVIIQSFLILGAAPWFGFSALLLATLVLVALSATSGWRETA
Ga0209811_101026582	3300027821	Surface Soil	MSTDPMSALERPGWLTFSAVVLFAVGCLRILSALYYFADSARVNNLSAGAFGDNLFLWGLWDLLIAVLALWAGYSLLGGNTFGRVIGYAWGVLVIVQSFMIIEYAPWFGFGSLLIAMLVIFALSATSDWKQSPTTTA
Ga0209811_101391752	3300027821	Surface Soil	MSTDPMSALERPGWLTFSAVVLFAVGCLRILSALYYFADSAKVNNLSAGAFGDNLFLWGIWDLGIAVLALWAGYSLLSGNTFGRVIGYAWGVLVIVQSFMIISYAPWFGFGSLLVAMLVIFALSATSEWRESPSTMA
Ga0268264_121994651	3300028381	Switchgrass Rhizosphere	VTSVSNGALGDHLFLWGLWDALIAVLAIWAAYSLLSGDTFGRVVGYIWAINVIIQSFLIIEYAPWFGFGALLLATLVIYALSSTSDYREAPPV
Ga0247818_108062711	3300028589	Soil	DDIFWWGVWDLGIAALALFAGYSLLSGNTFGRVVGYVWAILVIIQSFLILSYAPWYGFAAMLLAVLVICALSATSDYREGEHRAT
Ga0307293_101986233	3300028711	Soil	MSTQALDGLRRPGWLTFAGVVLVSVGFARIISAIYYFADSARVNNLSGGAFGGHIFLWGIWDLLIALLALWGGFSLFGGNTFGRVIGYTWAILVIVQSFLIISSAPWFGSAALL
Ga0307316_101031102	3300028755	Soil	VGFLRILSAIYYFADSARVVNVTAGALGGHLFLWGLWDLVIAVLALSAGFSLLSGNTFGRVIGYMWAIVVIVQSFLIIEYAPWFGFGTLLLAILVVYALSASSEWRETRV
Ga0307320_101170392	3300028771	Soil	FAAVVLFSVGCLRILSAIYYFADSAKVNDLTAGAFGDNLFLWGLWDLVIAGLALWGGYSLLSGNTFGRVIGYAWGALVIVQSFMIISYAPWFGFAALLVAIIVILALSATSEWRETPV
Ga0307320_103311221	3300028771	Soil	FLRILSAIYYFADSARVVNVTAGALGGHLFLWGLWDLVIAVLALSAGFSLLSGNTFGRVIGYMWAIVVIVQSFLIIEYAPWFGFGTLLLAILVVYALSASSEWRETRV
Ga0247824_105545121	3300028809	Soil	HLFLWGLWDALIAVLAIWAAYSLLSGDTFGRVVGYIWAINVIIQSFLIIEYAPWFGFGALLLATLVIYALSSTSDYREAPPV
Ga0307302_101200061	3300028814	Soil	MSTEAMYGLRRPGWLTFAAVVLFSVGCLRILSAIYYFADSAKVNDLTAGAFGDNLFLWGLWDLVIAGLALWGGYSLLSGNTFGRVIGYAWGALVIVQSFMIISYAPWFGFAALLVAIIVILALSATSEWRETPA
Ga0307310_101135151	3300028824	Soil	MSTTQAYSGLNRPGWLTFAAVVLFSVGFLRIISAIYYFADSSRVANLSAGALGNHLFLWGLWDLVIAVLALSAGYSLLSGNTFGRVIGYAWAVFVIVQSFLVIQYAPWFAFGMLLIAI
Ga0307289_103531372	3300028875	Soil	VSAGALGDHLFLWGLWDALIAVLAIWAAYSLLSGDTFGRVIGYIWAINVIIQSFLIIEYAPWFGFGALILATLVIYALSSTSDYREAPPV
Ga0307278_103513502	3300028878	Soil	MSTQALDGLQRPGWLTFAGVVLVSVGFARIISAIYYFADSTRVNNLSGGAFGHHLFIWGLWDLLIALLALWGGFSLFGGNTFGRVIGYTWGILVIVQSFLIFSSAPWFASA
Ga0307277_100487812	3300028881	Soil	MIAVHDRSIGEKGGTLSTQALDGLRRPGWLTFAGVVLVSVGFLRIISAIYYFADSARVNDLSAGALGDHLFLWGLWDLVIALLAFWGAYSLFGGNTFGRVIGYIWAILVIVQSFMIISYAPWFGSAALLLAVVVIFALSSTSEWREAERPL
Ga0075395_100429871	3300030973	Soil	MSTQALDGLRRPGWLTFAAVVLISVGFARVISAIYYFADSTRVNNLSGGAFGHHLFLWGLWDLLIAGLAVLGGFSLFGGNTFGRIIGYTWAISVIVQSFLIISVAPWYAFSALLLAILVI
Ga0307497_100027711	3300031226	Soil	MSTDPMSALERPGWLTFSAVVLFAVGCLRILSAFYYFADSARVNNLSAGAFGDHLFLWGLWDLGIAVLALWAGYSLLGGNTFGRVIGYAWGVLVIVQSFMIIGYAPWFGFGSLLVAMLVIFALSATSEWKQSPSAMA
Ga0307497_100145112	3300031226	Soil	MSSQADPSPPTSVSSVYAALSRPGWLTFAAVVLFSVGCLRVISALYYFADSNRLADLTFGAFGGNLFLWGLWDLGIAALAFLAGWSLLSNHRLGRVLGYLWAVFVIVQSFMIVSYAPWFGFAAIVLAILVLLALSTTSGWTEDAQKTSS
Ga0170824_1153083032	3300031231	Forest Soil	MSTQALDGLRRPGWLTFAAVVLISVGFARVISAIYYFADSTRVNNLSGGAFGHHLFLWGLWDLLIAGLAVLGGFSLFGGNTFGRIIGYTWAISVIVQSFLIISVAPWYAFSALLLAILVIGALASTSGWREVA
Ga0308194_100600942	3300031421	Soil	VNNLSGGAFGGHIFLWGIWDLLIALLALWGGFSLFGGNTFGRVIGYTWAILVIVQSFLIISSAPWFGSAALLIAVLVVYALSSTSGWREQPA
Ga0170820_105727682	3300031446	Forest Soil	VNNLSGGAFGHHLFLWGLWDLLIAGLAVLGGFSLFGGNTFGRIIGYTWAISVIVQSFLIISVAPWYAFSALLLAILVIGALASTSGWREVA
Ga0308174_109060151	3300031939	Soil	GFLRLISAIAYFADSARVNDLSNGLFGHHIFLWGLWDLVIAALAIWGGLSLLGGKTFGRAIGYVWAMLVIVQSFLILGVAPWFGFAALLVAVFVVYALSTTSGWREAGERS
Ga0318514_103986531	3300032066	Soil	VLDALDRPGWLTFAAVVMFSVGVLRVISAIYYFDDSVRVNNLAGGAFGHHLFLWGLWDLLIALLAFAGGLSLLQGKTFGRVLGYLWAGVVIVESFTMLSYALSTTSGWRDQPSP
Ga0308173_106722762	3300032074	Soil	MISVGFLRLISAIAYFADSARVNDLSNGLFGHHIFLWGLWDLVIAALAIWGGLSLLGGKTFGRAIGYVWAMLVIVQSFLILGVAPWFGFAALLVAVFVVYALSTTSGWREAGERS
Ga0370541_059067_175_513	3300034680	Soil	VGFLRIISAIYYFADSARVNDLSAGALGDHLFLWGLWDLVIALLALWGGFSLFGGNTFGRVIGYIWAILVIVQSFLILSYAPWFGSAALLLAVVVIFALSSTSEWREAERPL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F100855

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences