Metagenome / Metatranscriptome Family F100853

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F100853
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	101 residues
Representative Sequence	MAGRIVMPPMSEENRVVLPLGFVRGLLDTIEKPLIVAERSGNLLLVNTRARQFLESHGYATIQGMNLFSDFLRVDSRKIFGEIEKGEHEVDLQIQRGEAKSRVR
Number of Associated Samples	84
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	89.22 %
% of genes near scaffold ends (potentially truncated)	96.08 %
% of genes from short scaffolds (< 2000 bps)	83.33 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (59.804 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (50.980 % of family members)
Environment Ontology (ENVO)	Unclassified (48.039 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (50.980 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 27.27% β-sheet: 9.09% Coil/Unstructured: 63.64%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF07238	PilZ	22.55
PF00990	GGDEF	8.82
PF02511	Thy1	1.96
PF13551	HTH_29	0.98
PF00512	HisKA	0.98
PF01243	Putative_PNPOx	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG1351	Thymidylate synthase ThyX, FAD-dependent family	Nucleotide transport and metabolism [F]	1.96

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	59.80 %
Unclassified	root	N/A	40.20 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	59.80 %
Unclassified	root	N/A	40.20 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	59.80 %
Unclassified	root	N/A	40.20 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	54.90 %
Unclassified	root	N/A	40.20 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.20 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.20 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001089\|JGI12683J13190_1002671	All Organisms → cellular organisms → Bacteria	2379	Open in IMG/M
3300001167\|JGI12673J13574_1004937	All Organisms → cellular organisms → Bacteria → Acidobacteria	777	Open in IMG/M
3300001661\|JGI12053J15887_10062623	All Organisms → cellular organisms → Bacteria → Acidobacteria	2065	Open in IMG/M
3300002557\|JGI25381J37097_1075013	Not Available	552	Open in IMG/M
3300002914\|JGI25617J43924_10326945	Not Available	530	Open in IMG/M
3300004080\|Ga0062385_11164170	Not Available	525	Open in IMG/M
3300005176\|Ga0066679_10503041	All Organisms → cellular organisms → Bacteria → Acidobacteria	790	Open in IMG/M
3300005179\|Ga0066684_10902802	Not Available	577	Open in IMG/M
3300005181\|Ga0066678_10292649	All Organisms → cellular organisms → Bacteria → Acidobacteria	1064	Open in IMG/M
3300005450\|Ga0066682_10732358	Not Available	604	Open in IMG/M
3300005555\|Ga0066692_10413242	All Organisms → cellular organisms → Bacteria → Acidobacteria	857	Open in IMG/M
3300005556\|Ga0066707_10343424	All Organisms → cellular organisms → Bacteria → Acidobacteria	976	Open in IMG/M
3300005560\|Ga0066670_10138857	All Organisms → cellular organisms → Bacteria → Acidobacteria	1408	Open in IMG/M
3300005561\|Ga0066699_10081849	All Organisms → cellular organisms → Bacteria → Acidobacteria	2084	Open in IMG/M
3300005586\|Ga0066691_10009365	All Organisms → cellular organisms → Bacteria	4490	Open in IMG/M
3300005586\|Ga0066691_10499456	All Organisms → cellular organisms → Bacteria → Acidobacteria	727	Open in IMG/M
3300005586\|Ga0066691_10833114	Not Available	543	Open in IMG/M
3300006032\|Ga0066696_10286423	All Organisms → cellular organisms → Bacteria → Acidobacteria	1069	Open in IMG/M
3300006791\|Ga0066653_10486658	Not Available	626	Open in IMG/M
3300006794\|Ga0066658_10008652	All Organisms → cellular organisms → Bacteria	3712	Open in IMG/M
3300006796\|Ga0066665_11682192	Not Available	502	Open in IMG/M
3300007788\|Ga0099795_10266651	All Organisms → cellular organisms → Bacteria → Acidobacteria	743	Open in IMG/M
3300009012\|Ga0066710_104617701	Not Available	515	Open in IMG/M
3300009038\|Ga0099829_11341996	Not Available	591	Open in IMG/M
3300009089\|Ga0099828_10273676	All Organisms → cellular organisms → Bacteria → Acidobacteria	1516	Open in IMG/M
3300010337\|Ga0134062_10035693	All Organisms → cellular organisms → Bacteria → Acidobacteria	1977	Open in IMG/M
3300011271\|Ga0137393_10321215	All Organisms → cellular organisms → Bacteria → Acidobacteria	1320	Open in IMG/M
3300012096\|Ga0137389_11384253	Not Available	599	Open in IMG/M
3300012096\|Ga0137389_11770879	Not Available	514	Open in IMG/M
3300012200\|Ga0137382_10733571	Not Available	709	Open in IMG/M
3300012202\|Ga0137363_10613768	All Organisms → cellular organisms → Bacteria → Acidobacteria	918	Open in IMG/M
3300012203\|Ga0137399_10682932	All Organisms → cellular organisms → Bacteria → Acidobacteria	864	Open in IMG/M
3300012205\|Ga0137362_11745411	Not Available	509	Open in IMG/M
3300012208\|Ga0137376_11728398	Not Available	516	Open in IMG/M
3300012209\|Ga0137379_10114614	All Organisms → cellular organisms → Bacteria → Acidobacteria	2593	Open in IMG/M
3300012209\|Ga0137379_11300490	Not Available	633	Open in IMG/M
3300012211\|Ga0137377_11444938	Not Available	615	Open in IMG/M
3300012211\|Ga0137377_11461159	Not Available	611	Open in IMG/M
3300012211\|Ga0137377_11771820	Not Available	538	Open in IMG/M
3300012349\|Ga0137387_10543226	All Organisms → cellular organisms → Bacteria → Acidobacteria	843	Open in IMG/M
3300012351\|Ga0137386_10449044	All Organisms → cellular organisms → Bacteria → Acidobacteria	929	Open in IMG/M
3300012357\|Ga0137384_10038978	All Organisms → cellular organisms → Bacteria	3917	Open in IMG/M
3300012357\|Ga0137384_11439689	Not Available	538	Open in IMG/M
3300012359\|Ga0137385_10632503	All Organisms → cellular organisms → Bacteria → Acidobacteria	897	Open in IMG/M
3300012361\|Ga0137360_11096792	All Organisms → cellular organisms → Bacteria → Acidobacteria	687	Open in IMG/M
3300012363\|Ga0137390_10150310	All Organisms → cellular organisms → Bacteria → Acidobacteria	2313	Open in IMG/M
3300012363\|Ga0137390_11290579	Not Available	676	Open in IMG/M
3300012582\|Ga0137358_10567343	All Organisms → cellular organisms → Bacteria → Acidobacteria	762	Open in IMG/M
3300012582\|Ga0137358_10736169	All Organisms → cellular organisms → Bacteria → Acidobacteria	659	Open in IMG/M
3300012683\|Ga0137398_10604453	All Organisms → cellular organisms → Bacteria → Acidobacteria	759	Open in IMG/M
3300012918\|Ga0137396_10388637	All Organisms → cellular organisms → Bacteria → Acidobacteria	1034	Open in IMG/M
3300012918\|Ga0137396_10433182	All Organisms → cellular organisms → Bacteria → Acidobacteria	975	Open in IMG/M
3300012918\|Ga0137396_10908638	Not Available	645	Open in IMG/M
3300012923\|Ga0137359_10762778	All Organisms → cellular organisms → Bacteria → Acidobacteria	840	Open in IMG/M
3300012944\|Ga0137410_12120775	Not Available	501	Open in IMG/M
3300012975\|Ga0134110_10047866	All Organisms → cellular organisms → Bacteria → Acidobacteria	1685	Open in IMG/M
3300012975\|Ga0134110_10073267	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1365	Open in IMG/M
3300012977\|Ga0134087_10493884	All Organisms → cellular organisms → Bacteria → Acidobacteria	615	Open in IMG/M
3300015241\|Ga0137418_10266967	All Organisms → cellular organisms → Bacteria → Acidobacteria	1444	Open in IMG/M
3300015241\|Ga0137418_10972584	Not Available	617	Open in IMG/M
3300015241\|Ga0137418_10974847	Not Available	616	Open in IMG/M
3300015264\|Ga0137403_11456367	Not Available	534	Open in IMG/M
3300015359\|Ga0134085_10237192	All Organisms → cellular organisms → Bacteria → Acidobacteria	792	Open in IMG/M
3300018431\|Ga0066655_10018793	All Organisms → cellular organisms → Bacteria → Acidobacteria	3180	Open in IMG/M
3300020170\|Ga0179594_10016899	All Organisms → cellular organisms → Bacteria → Acidobacteria	2152	Open in IMG/M
3300020199\|Ga0179592_10024734	All Organisms → cellular organisms → Bacteria → Acidobacteria	2688	Open in IMG/M
3300020581\|Ga0210399_10828147	All Organisms → cellular organisms → Bacteria → Acidobacteria	754	Open in IMG/M
3300020581\|Ga0210399_10849234	All Organisms → cellular organisms → Bacteria → Acidobacteria	743	Open in IMG/M
3300021170\|Ga0210400_10705695	All Organisms → cellular organisms → Bacteria → Acidobacteria	829	Open in IMG/M
3300021178\|Ga0210408_10831341	All Organisms → cellular organisms → Bacteria → Acidobacteria	722	Open in IMG/M
3300021559\|Ga0210409_10024312	All Organisms → cellular organisms → Bacteria	5863	Open in IMG/M
3300024288\|Ga0179589_10360089	All Organisms → cellular organisms → Bacteria → Acidobacteria	662	Open in IMG/M
3300024330\|Ga0137417_1325471	All Organisms → cellular organisms → Bacteria → Acidobacteria	3816	Open in IMG/M
3300026277\|Ga0209350_1019804	All Organisms → cellular organisms → Bacteria → Acidobacteria	2080	Open in IMG/M
3300026300\|Ga0209027_1238895	Not Available	582	Open in IMG/M
3300026304\|Ga0209240_1082384	All Organisms → cellular organisms → Bacteria → Acidobacteria	1183	Open in IMG/M
3300026325\|Ga0209152_10052962	All Organisms → cellular organisms → Bacteria → Acidobacteria	1429	Open in IMG/M
3300026334\|Ga0209377_1286993	Not Available	545	Open in IMG/M
3300026359\|Ga0257163_1018622	All Organisms → cellular organisms → Bacteria → Acidobacteria	1073	Open in IMG/M
3300026482\|Ga0257172_1112682	Not Available	500	Open in IMG/M
3300026497\|Ga0257164_1067613	Not Available	591	Open in IMG/M
3300026550\|Ga0209474_10734837	Not Available	513	Open in IMG/M
3300026552\|Ga0209577_10472286	All Organisms → cellular organisms → Bacteria → Acidobacteria	856	Open in IMG/M
3300026555\|Ga0179593_1056113	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3492	Open in IMG/M
3300026557\|Ga0179587_10762217	Not Available	638	Open in IMG/M
3300027645\|Ga0209117_1129596	Not Available	670	Open in IMG/M
3300027655\|Ga0209388_1080669	All Organisms → cellular organisms → Bacteria → Acidobacteria	937	Open in IMG/M
3300027671\|Ga0209588_1253216	Not Available	537	Open in IMG/M
3300027738\|Ga0208989_10192796	Not Available	676	Open in IMG/M
3300027846\|Ga0209180_10139964	All Organisms → cellular organisms → Bacteria → Acidobacteria	1392	Open in IMG/M
3300027862\|Ga0209701_10318789	All Organisms → cellular organisms → Bacteria → Acidobacteria	888	Open in IMG/M
3300027875\|Ga0209283_10369383	All Organisms → cellular organisms → Bacteria → Acidobacteria	939	Open in IMG/M
3300027882\|Ga0209590_10389241	All Organisms → cellular organisms → Bacteria → Acidobacteria	900	Open in IMG/M
3300027903\|Ga0209488_10047409	All Organisms → cellular organisms → Bacteria → Acidobacteria	3159	Open in IMG/M
3300027903\|Ga0209488_11140292	Not Available	529	Open in IMG/M
3300028047\|Ga0209526_10934326	Not Available	524	Open in IMG/M
3300028536\|Ga0137415_11073950	Not Available	617	Open in IMG/M
3300028536\|Ga0137415_11076569	Not Available	616	Open in IMG/M
3300029636\|Ga0222749_10266311	All Organisms → cellular organisms → Bacteria → Acidobacteria	876	Open in IMG/M
3300029636\|Ga0222749_10786102	Not Available	521	Open in IMG/M
3300032180\|Ga0307471_100007363	All Organisms → cellular organisms → Bacteria → Acidobacteria	7087	Open in IMG/M
3300032205\|Ga0307472_102410608	Not Available	534	Open in IMG/M

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.02%
Aquatic	Environmental → Aquatic	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.02%
Freshwater	Environmental → Aquatic → Freshwater	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	93.14%
Loam	Environmental → Terrestrial → Soil → Loam	5.88%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	55.88%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	25.49%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.88%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.98%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	50.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	18.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.86%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.88%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.90%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.96%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001089	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3	Environmental	Open in IMG/M
3300001167	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026359	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-A	Environmental	Open in IMG/M
3300026482	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B	Environmental	Open in IMG/M
3300026497	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-B	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12683J13190_10026711	3300001089	Forest Soil	MAGRIAMPPMSEENRVVLPLGFVRGLLDTMEKPLIVAERSGNLLLVNTRARQFLESHGYATIQEINLFSDLLQVDSRKIFGQIEEGEHEVRLQIQRGEAKSSV
JGI12673J13574_10049371	3300001167	Forest Soil	MEGRISTPPMPEEGNRTVLPLGFVSGLLDMIEKPLIVAERSGNLLFVNTRARKCMESRGYTAIQALNLFGDVLHVEPGKIFDKIEKGEHEVHLQIQRGDAKSTVRIQWMP
JGI12053J15887_100626233	3300001661	Forest Soil	MPLGKTFTTPNEGRNHLMAGRIAMPPMSEENRVVLPLGFVRGLLDTIEKPLIVAERSGNLLLVNTRARQFLEAHGYATIQGINLFSDLLGVDSRKIFGGIEKGEHEVDLQIQRGEAK
JGI25381J37097_10750131	3300002557	Grasslands Soil	MAGQITVPPMSEEGNRTVLPLCYVTALLDTMEKPLIVVERGGNILMVNSRARQCLESQGYPAIQGMNLFSDLLHEEPRKIFDEIEKGEHQVHLQIQRGETKSRVRVQWMPQPDWLVLEIENKSEAQPLADPATQLTVQDLLQE
JGI25617J43924_103269451	3300002914	Grasslands Soil	MPPILEEGNRAVLPFGFVRGLLDKIQKPLIVAERAGNLLLINTCAKQFLESNGYAATPSLNLFKDLLQLDARKIFGEIEKGENEVDLQIQLGEAKSTARVQ
Ga0062385_111641701	3300004080	Bog Forest Soil	MAGRIALPLLSEEGNRATLPLGIVRGLLDTIDKPLVVAERSGNLLLINTRAKQFLESRGCAVAPGLNLFNDFLKVDARKIFDEIEKGEHEVHL
Ga0066679_105030412	3300005176	Soil	MAGRIAVPPMAEEGSRALIPLDFVRGLFNTIEKPLIVAERNGNLLLVNTRAEQFVESHGYAITPGLNVFKDLLKTDARKIFEELEKGEHRL
Ga0066684_109028021	3300005179	Soil	MAGQITVPPMSEEGNRTVLPLGYVTALLDTMEKPLIVVERSGNILMVNSRARQFLESRGYPAIQGMNLFSDLLHAEPRKIFDEIEKGEHEVHLQIQRGDAKSSVRVQWMPQPDWLVLEIENK
Ga0066678_102926492	3300005181	Soil	MAGRIAVPPMAEEGSRALIPLDFVRGLFNTIEKPLIVAERNGNLLLVNTGAEQFVESHGYAITPGLNLFKDLLKADTRKIFEELEKGEHRLEHHFQIGGVKS
Ga0066682_107323581	3300005450	Soil	MAGRITTPPMSQEGNRAVLPLGFVSGLLDMIEQPLIVAERSGNLLFVNTRARKCLESRGYMAIQGLNLFGDLLHVEAGKIFDKIEKGEHQV
Ga0066692_104132421	3300005555	Soil	MAGRIVMPPIAEEGNRASLPIGFVRGLLDTMEKPLIVAERSGRLLLVNTRARKFFESSGHATTPGLNLFNDLLKVDARKIFGEIEKGEHEVELQIQRGSEKSTARVQWMPE
Ga0066707_103434242	3300005556	Soil	MAGRIAVPPMAEEGSRALIPLDFVRGLFNTIEKPLIVAERNGNLLLVNTRAEQFVESHGYAITPGLNLFKDLLKTDARKIFEELEKGEHRLEHHFQIGG
Ga0066670_101388571	3300005560	Soil	MAGRITTPPMSQEGNRAVLPLGFVSGLLDMIEQPLIVAERSGNLLFVNTRARKCLESRGYMAIQGLNLFGDLLHMEPGKIFDKIEKGEHQVHLQIQRGE
Ga0066699_100818493	3300005561	Soil	MAGRITVPPMSEEGNRTVLPLGYVTALLDAMEKPLIVVERSGNILMVNSRARQFLESRGYPAIQGMNLFSDLLHAEPRKIFDEIEKGEHEVHLQIQRGEAKSSVRVQWMPQPDWLVLEIENK
Ga0066691_100093651	3300005586	Soil	MAGRITVPPMSEEGNRTVLPLGYVAALLDTMEKPLIVVERSGNILMVNSRARQCLESQGYPAIQGMNLFSDLLQEEPRKVFDEIEKGEHVVLRQIQRGKAKSRVRVQWMPQPDWLVLEIENKSEAQPLADPATQLTVQDLLQ
Ga0066691_104994562	3300005586	Soil	MEGRITTPPMPEEGNRAVLPLGFVSGLLDMIEKPLIVAERSGNLLFVNIRARRCMESRGYTAIQGLNLFGDVLHVEAGKIFDKIEKGEHEVHLQIQR
Ga0066691_108331141	3300005586	Soil	MAGRITVPPMSEEGNRTVLPLGYVTALLDAMEKPLIVVERSGNILMVNSRARQFLESRGYPAIQGMNLFSDLLHAEPRKIFDEIEKGEHEVHLQIQRGEAKSSVRVQWMPQPDWLVLEIENKSEAQPLADPATQLTVQDLLQ
Ga0066696_102864231	3300006032	Soil	MAGRITVPPMSEEGNRTVLPLGYVTALLDAMEKPLIVVERSGNILMVNSRARQFLESRGYPAIQGMNLFSDLLHAEPRKIFDEIEKGEHEVHLQIQRGEAKSSVRVQWMPQPDWLVLEIENKSEAQPLADPATQLTV
Ga0066653_104866582	3300006791	Soil	MAGRIAVPPMAEEGSRALIPLDFVRGLFNTIEKPLIVAERNGNLLLVNTRAEQFVESHGYAITPGLNLFKDLLKTDARKIFEELEKGEHRLEHHFQIGGVK
Ga0066658_100086526	3300006794	Soil	MAGRITVPPMSEEGNRTVLPLGYVTALLDAMEKPLIVVERSGNILMVNSRARRFLESRGYPAIQGMNLFSDLLHAEPRKIFDEIEKGEH
Ga0066665_116821921	3300006796	Soil	MAGRITVPSMSEVGNRRVLPFGFVSGLLDTIEKPLIVAERSGNLLMVSASARQYLESRGYVAIQGMNLFSDLLHAEPLKIFEKIEKGEPEVHLQIQRAEAKFTVRVQWMPEPNWLVVEIENKSGAQPSADPAT
Ga0099795_102666511	3300007788	Vadose Zone Soil	MPEEGNRAVLPLGFVSGLLDMIEKPLIVAERSGNLLFVNIRARRCMESRGYTAIQGLNLFGDVLHVEAGKIFDKIEKGEHEVHLQIQR
Ga0066710_1046177011	3300009012	Grasslands Soil	MAGRITTPPMSEEGNRAMLPLGFVRGLREIIEKPLIVAGRSGNLLFVKTCARQCMESRGYTAIQGLNLFGDLLHVEPRKIFDEIEKG
Ga0099829_113419961	3300009038	Vadose Zone Soil	MAEEGNRTVLPLGFVSGLLDMIEKPLIVAERSGNLLFVNIRARRCMESRGYTAIQGLNLFGDVLHVEAGKIFDKIEKGEHEVHLQIQRGDAKSTVRIQWMPEPD
Ga0099828_102736761	3300009089	Vadose Zone Soil	MPGRENFYHYTLGTEKSLMAGRIAMPPMSEENRAVLPLGFVRGLLDTIEKTLIVAERSGDLLVVNTRARQFLESQGYATIQGLNLFKDLLQVDSRKIFGEIEKGEHQVELQIPRGE
Ga0134062_100356931	3300010337	Grasslands Soil	MTEEGNRAVLPLGFVRGLLDTIEKPLMVAERNGNLLLINTRAKQFLESHGHPTTPGLNLFKDLLKTDARKIFDEFEKGEHDLEHPIQIGGAKSGARVRWMP
Ga0137393_103212151	3300011271	Vadose Zone Soil	MSEEGNRAVLPLGFIRGLLDMIEQPLIVAERSGNLLFVNTRARKCMESRGYTAIQGLNLFGDLLHVEPRRIFDKIEKGEHEVHLQIQRG*
Ga0137389_113842531	3300012096	Vadose Zone Soil	MSEEGNRAVLPLGFVLGLLDTIEKPLIVAERSGNLLLVNTRARQFLESHGYTTTPGLNLLKDLLQEDARKIFGEIENGKHEVDLQIQRGDATSAIRI
Ga0137389_117708791	3300012096	Vadose Zone Soil	MSEEGNRAVLPLGFVLGLLDTIEKPLMVAERSGNLLLVNTRARQFLESHGYATTPGLNLFKDFLQEDARKIFGELEKGEHEVNLQIQRGEAKS
Ga0137382_107335711	3300012200	Vadose Zone Soil	MSEEGNRTVLPLGYVTALLDTMEKPLIVVERSGNILMVNSRARQCLESQGYPAIQGMNLFSDLLQEEPRKIFDEIEKGEHVVLRQIQRGEAKSRVRVQWMPQPDWLVLEIENKSEAQP
Ga0137363_106137681	3300012202	Vadose Zone Soil	MAGRIVMPPMSEENRVVLPLGFVRGLLDTIEKPLIVAERSGNLLLVNTRARQFLESHGYATIQGMNLFSDFLRVDSRKIFGEIEKGEHEVDLQIQRGEAKSRVR
Ga0137399_106829321	3300012203	Vadose Zone Soil	MAGRIAMPPMSEENRVVLPLGFVRGLLDTIEKPLIVAERSGTLLLVNTRARQFLESHGYATIQVINLFSDLLQVDSRKIFGEIEKG
Ga0137362_117454111	3300012205	Vadose Zone Soil	MGGRVALPPMSEEGKRAVVPLGFVRGLLDTIEKPMIVAERSGNLLLVNNRAKQFLESHGYATTPGLNLFNDLLRVDARKIFGAIEKGEHEMDLHIQRGEEK
Ga0137376_117283981	3300012208	Vadose Zone Soil	MSEEGNRTVLPLGYVAALLDTMEKPLIVVERSGNILMVNSHARQCLESQGYPAIQGMNLFSDLLQEEPRKVFDEIEKGEHVVLRQIQRGKAKSRVRVQWMPQPDWLVLEIENKSEAQPLA
Ga0137379_101146144	3300012209	Vadose Zone Soil	MSGRIAVPPLSEERNRATLPLGFVNALLDKIEKPLIVAERSGNLLLVNTQASQYLESCGNAIIQGLNLFNDVLQVDATEIFGKVE
Ga0137379_113004901	3300012209	Vadose Zone Soil	MAGRIALPPTSEERNSAVLPLGVVSRLLDTIEEPLMVAERSGNLLLVNTRARQCLGFHGYAEIQGLNLFNDILQVDSKKIFGELERGQHEV
Ga0137377_114449381	3300012211	Vadose Zone Soil	MAGRIALPPTSEERNSAVLPLGVVSRLLDTIEEPLMVAERSGNLLLVNTRARQCLGFHGYAEIQGLNLFNDILQVDSKKIFGELERGQHEVNLNVEGAEKK
Ga0137377_114611591	3300012211	Vadose Zone Soil	MSEEGNRTVLPLGYVTALLDTMEKPLIVVERSGNILMVNSRARRCLESQGYPAIQGMNLFSDLLQEEPRKIFDEIEKGEHVVLRQIQRGEAKSRVRVQWMPQPDWLVLEIENKSEAQP
Ga0137377_117718202	3300012211	Vadose Zone Soil	MSEEGNRTVLPLGYVTALLDAMEKPLIVVERSGNILMVNSRARQFLESRGYPAIQGMNLFSDLLHAEPRKIFDEIEKGEHEVHLQIQRGEAKSRVRVQWMPQPDWLVLEIENKSEAQP
Ga0137387_105432262	3300012349	Vadose Zone Soil	MAGRIALPPMSEERNSAVLPLGVVSRLLDTIEEPLMVAERSGNLLLVNTRARQCLGFHGNAEIQGLNLFNDILQVDSKKIFGELERGQHEVNLN
Ga0137386_104490441	3300012351	Vadose Zone Soil	MAGRIALPPMSEERNSAVLPLGIVNRLLDAIEEPLMVAERSGSLLLVNTRARQCLGFHGYAEIQGLNLFNDILQVDSKKIFGELERGQHEV
Ga0137384_100389787	3300012357	Vadose Zone Soil	MSEEGNRTVLPLGYVTALLDTMEKPLIVVERSGNILMVNSRARQCLESRGYPAIQGMNLFSDLLHAEPRKIFDEIEKGEHEVHLQIQRGEAKSRVRVQWMPQPDWLVL
Ga0137384_114396891	3300012357	Vadose Zone Soil	MAGRIALPPMSEERNSAVLPLGVVSRLLDTIEEPLMVAERSGNLLLVNTRARQCLGFHGNAEIQGLNLFNDILQVDSKKIFGELERGQHEVNLNVEGAEKK
Ga0137385_106325032	3300012359	Vadose Zone Soil	MAGRIALPPTSEERNSAVLPLGIVNRLLDAIEEPLMVAERSGSLLLVNTRARQCLGFHGYAEIQGLNLFNDILQVDSKKIFGELERGQHEVNLNIEGGEKK
Ga0137360_110967922	3300012361	Vadose Zone Soil	MSEEGNQAVLPLGFVRGLLDMIEKPLIVAERSGNLLFVNSRARQGMESRGYTAIQGLNLFGDLLHVEPRKIFDKIEKGEHEVHLQ
Ga0137390_101503101	3300012363	Vadose Zone Soil	MSEEGNRAFLPIGFVRGLLDTIEKPLIVTERSGNLLLVNSRAKQFLESQGYTKTADLNLFKDLLQVDARKVFAEIEKGEHEVNLQIQGGESKSSVRVQ
Ga0137390_112905791	3300012363	Vadose Zone Soil	MAGRIVMPPMSEEGNRAVLPISFVRGLFDTMEKPLIVAERAGNLLLINTRAKQFLESNGYAATPSLNLFKDLLQLDARKIFGEIEKGEHEVDLQIQLGEAKSTA
Ga0137358_105673431	3300012582	Vadose Zone Soil	MSEEGNRTVLPLSFVSGLLDLIEKPLIVAERSGNLLFVNSRARQGMESRGYTAIQGLNLFGDLLHVEPRKIFDKIEKGEHEVHLQ
Ga0137358_107361691	3300012582	Vadose Zone Soil	MSEEGKRAMLPLGFVSGLLEMIEQPLIVAERSGNLLFVNTRARKCMESRGYTAIQGLNLFGDLLHVEPRKIF
Ga0137398_106044531	3300012683	Vadose Zone Soil	MSEEGNRTVLPLGYVTALLDTMEKPLIVVERSGNILMVNLRARQCLESRGYPAIQGMNLFSDLVHAEPRKIFDEIEK
Ga0137396_103886372	3300012918	Vadose Zone Soil	MAGRIAIPAMSEEGNQAVLPLGLVLGLLDTIEKPLMVAERSGHLLLVNTRAKQFLESNGYAATPGLNLFNDLLQVDARKIFGEIEKGEHQVELQIRRGAAKSTAQVHWMPG
Ga0137396_104331821	3300012918	Vadose Zone Soil	MAGRIAVPPRSEEGNRTVLPLGYVTALLDTMEKPLIVVERSGNILMVNTRARQCLESQGYPAVQGMNLFSDLLHVEPRKIFDKIEKGEHDVHLQIQ
Ga0137396_109086381	3300012918	Vadose Zone Soil	MAGRIALPPMSEEGNRAALPLRFVRGLLETIEKALIVAERSGDLLLVNARAREFLESCGHTITPGLNLFKDFLKVDARKIFEEIEKGEHEVELQIQRGEGK
Ga0137359_107627782	3300012923	Vadose Zone Soil	MAGRIALPPTSEERNSAVLPLGVVSRLLDTIEEPLMVAERSGNLLLVNTRARQCLGFHGYAEIQELNLFNDILQVDSKKIFGELERGQHEVNLNIE
Ga0137410_121207752	3300012944	Vadose Zone Soil	MSEEGTRTVLPLSFVSGLLDMIEKPLIVAERSGNLLFVNSRARQGMESRGYTAIQGLNLFGDLLHVEPRKIFDKIEKGEHEVHLQIQRGEAKSTVRVQWMPEPDW
Ga0134110_100478663	3300012975	Grasslands Soil	MSQEGNRAVLPLGFVSGLLDMIEQPLIVAERSGNLLFVNTRARKCLESRGYMAIQGLNLFGDLLHVEAGKIFDKIEKGEHQVHLQIQR
Ga0134110_100732672	3300012975	Grasslands Soil	MAGRIAVPPMAEEGSRALIPLDFVRGLFNTIEKPLIVAERNGNLLLVNTRAEQFVESHGYAITPGLNLFKDLLKTDARKIFEELEKENTG*
Ga0134087_104938841	3300012977	Grasslands Soil	MAGRVAIPPMTEEGNRAVLPLGFVRGLLDTIEKPLMVAERNGNLLLINTRAKQFLESHGHPTTPGLNLFKDLLKTDARKIFDEFEKGEHDL
Ga0137418_102669671	3300015241	Vadose Zone Soil	MAGRITTPPISEEGNRAVLPLVFVSGLLDMIEQPLIVAERSGNLLFVNTRARKYMESRGYTAIQGLNLFGELLHVEPRKIFDKIEK
Ga0137418_109725841	3300015241	Vadose Zone Soil	MAGRIAIPPMTEENRVVLPLGFVRGLLDTIEKPLIVAERSGSLLLVNTRARQFLESHGYATIQVINLFSDLLQVDSRKIFGEIEKGEHEVDLQIQRGEAKSRVRVQWMP
Ga0137418_109748471	3300015241	Vadose Zone Soil	MSEENRVVLPLGFVRGLLDTIEKPLIVAERSGNLLLVNTRARQFLEAHGYATIQGINLFSDLLGVDSRKIFGGIEKGEHEVDLQIQRGEAKSRVRVQWMP
Ga0137403_114563671	3300015264	Vadose Zone Soil	MSEKGNRVVVPLGFVRGLFDTIEKPMIVAERSGNPLLINVRARQLLESLGYSITPGLNLFKDLLLADARKIFSEIEKGKHEVDLQIQRGNTKS
Ga0134085_102371922	3300015359	Grasslands Soil	MAGRIALPPMSEERNSAVLPLGVVSRLLDTIEEPLMVAERSGNLLLVNTRARQCLGFHGNAEIQGLNLFNDILQVDSKKIFGELERGQHEVNLNIEGGEKKSAARIQ
Ga0066655_100187935	3300018431	Grasslands Soil	MAGRITVPPMSEEGNRTVLPLGYVTALLDAMEKPLIVVERSGNILMVNSRARQFLESRGYPAIQGMNLFSDLLHAEPRKIFDEIEKGEHEVHLQIQRGEAK
Ga0179594_100168991	3300020170	Vadose Zone Soil	MAGRVVMPPMSEEGNRAIVPLGFVRGLFDTIEKPMIVAERSGTPLLINSRARQLLESLGYAITPGLNLFKDLLQVDARKVFSEIEKGE
Ga0179592_100247343	3300020199	Vadose Zone Soil	MAGRIAMPPMSEENRVVLPLGFVRGLLDTIEKPLIVAERSGTLLLVNTRARQFLESHGYATIQVINLFSDLLQVDSPKIFGEIEKGEHEVDLQIQRGEAKSRVRV
Ga0210399_108281472	3300020581	Soil	MAGRIVLPPMSEAGNRTALPLGYVLGILDTIDRPLIVAERSGNLILINTRAKQFLESSGHAISPSLNLFNDFLKVDSRKIFDEIEKGEHEVELQIRRGE
Ga0210399_108492341	3300020581	Soil	VPTASEEGNRTVVPLGHVRGLLDTIEKPLLVAQRSGNLLLVNTCAKQFLESHGYPLMPGLNLFKDILKADARKIFGELEKGENEVDLPMERGTGKSTARVQWMNEL
Ga0210400_107056951	3300021170	Soil	MAGRIAMPRMSEENRAVLPLGFVRGLLDTIEKTLIVAERSGDLLVVNTRARQFLESQGYATLQGLNLFNDLLQVDSRKIFGEIEKG
Ga0210408_108313412	3300021178	Soil	MAGRIALPPMSEEGNRAALPLRFVRGLLDTIEKALIVTERSGDLLLVNTRAKQFLESCGHTVTPGLNLFNDFLKVDARKIFEEIEKGEHEVQVPIKRGE
Ga0210409_100243121	3300021559	Soil	MRARENFYHFSRWWDESMAGRIVMPPMSEEGNRAFLPIGFVRGLLDTIEKALIVTERSGNLLLVNSRAKQFLESQGYTKTADLNLFKDLLQVDARKIFAEIE
Ga0179589_103600891	3300024288	Vadose Zone Soil	MAGRIVLPPMSEAGNRTALPLEFVRGLLDSIDRPLMVAERSGNFLLINNRAKHFLESSGHAISPSLNLFNDFLKVDARKIFDEIEKG
Ga0137417_13254716	3300024330	Vadose Zone Soil	MSEENRVVLPLGFVRGLLDTIEKPLIVAERSGNLLLVNTRARQFLEAHGYATIQGINLFSDLLGVDSRKIFGGIEKGEHEVDLQISGGKRNPGCGSSGCPSRTGWW
Ga0209350_10198041	3300026277	Grasslands Soil	MAGRITTPPMSQEGNRAVLPLGFVSGLLDMIEQPLIVAERSGNLLFVNTRARKCLESRGYMAIQGLNLFGDLLHVEAGKIFDKIEKGEHQ
Ga0209027_12388951	3300026300	Grasslands Soil	MAGRITVPPMSEEGNRTVLPLAFVSGLLDTIEKPLIVSERNGNLLMANSCARQCLESPGYMAIQGMNLFSDLLRVEPRKIFDKIEKGERQV
Ga0209240_10823841	3300026304	Grasslands Soil	MAGRIVMPPIVEEGNRASLPIGYVRGLLDTVEKPLIVAERSGRLLLVNTRGRQFLESNGHTTIPGLNLFNDLLKVDARKIFSEIEKGEHEVELQIQRGDGKSTARVQWM
Ga0209152_100529623	3300026325	Soil	MAGRITVPPMSEEGNRTVLPLGFVSGLLDTIEKPLIVAERNGNLLMANSCAKQCLESPGYMAIQGMNLFSDLLRVEPRKIFDKIEKGEHQV
Ga0209377_12869931	3300026334	Soil	MAGRIAVPPMAEEGSRALIPLDFVRGLFNTIEKPLIVAERNGNLLLVNTRAEQFVESHGYAITPGLNVFKDLLKTDARKIFEELEKGEHRLEH
Ga0257163_10186222	3300026359	Soil	MAGRITTPPMSEEGNRTVLPLSFVSGLLDMIEKPLIVAERSGNLLFVNSRARQGMESRGYTAIQGLNLFGDLLHVEPRKIFDKIEKGEHEVHLQIQRGEAKST
Ga0257172_11126821	3300026482	Soil	MAGRIAIPAMSEEGNQAVLPLGLVLGLLDTIEKPLMVAERSGHLLLVNTRAKQFLESNGYAATPGLNLFSDLLQVDARKIFGEIEKGEHQVELQIR
Ga0257164_10676131	3300026497	Soil	MAGRIAMPPMSEENRVVLPLGFVRGLLDTIEKPLIVAERSGNLLLVNTRARQFLEAHGYATIQGINLFSDLLGVDSRKIFGGIEKGEHEVD
Ga0209474_107348371	3300026550	Soil	MAGRIAVPPMAEEGSRALLPLDFVRGLFNTIEKPLIVAERNGNLLLVNTGAEQFVESHGYAITPGLNLFKDLLKADTRKIFEELEKGE
Ga0209577_104722862	3300026552	Soil	MAGRIAVPPMAEEGSRALLPLDFVRGLFNTIEKALIVAERNGNLLLVNTRAEQFVESQGYAITPGLNLFKDLLKADTRKIFEELEKGEHRLEHHFQI
Ga0179593_10561131	3300026555	Vadose Zone Soil	MQTRENFYHFYYERAGLMAGRIAAPPMAEEGSRAFLPLGFVRGLFNTVEKPLIVAERNGNLLLINTRAEQFVESHGYATTPGLNLFKDILRVDARKIFDEL
Ga0179587_107622171	3300026557	Vadose Zone Soil	MAGRITTPPMSEEGNRAMLPLGFVRGLLDMIEKPLMVAERSGNLLFVNTRARKYMESRGYTAIQGLNLFGELLHVEPRKIFDKIEKGEHEVHLQIQ
Ga0209117_11295961	3300027645	Forest Soil	MAGRIITPPMLEEGNRAVLPLGFVSGLLDMIEKPLIVAERSGNLLFVNTRARQCMETRGYTAIQGLNLFGDLLHVEPRKIFDKIEKGEHEVHLQIQRGET
Ga0209388_10806691	3300027655	Vadose Zone Soil	MAGRIAMPPMSEENRVVLPLGFVRGLLDTIEKPLIVAERSGTLLLVNTRARQFLESHGYATIQVINLFSDLLQVDSRKIFGEIEKGEHEVD
Ga0209588_12532161	3300027671	Vadose Zone Soil	MRARENFYHFTLGTESSLMAGRIAMPPMAGENRAVLPLGFVRGLLDTIDKTLIVAERSGDLLVVNTRARQFLESQGYATIQGLNLFKDLLQVDSRKIFGEIEKGE
Ga0208989_101927961	3300027738	Forest Soil	MAGRIATPPMSEENRVVLPLGFVRGLLDTMEKPLIVAERSGNLLLVNTRARQFLESHGYATIQGMNLFSDFLRVDSRKIFGEIEKGEHEVDLQIQRGEAKSRVRVQWMPEPDW
Ga0209180_101399643	3300027846	Vadose Zone Soil	MAGRTVMPPIAEEGNRASLPIGFVRGLLDKMEKPLIVAERSGRLLLVNTRARQFLESSGHATTPGLNLFNDLLKVDARKIFGEIEKGEHEV
Ga0209701_103187891	3300027862	Vadose Zone Soil	MAGRTVMPPIAEEGNRASLPIGFVRGLLDKMEKPLIVAERSGRLLLVNTRARQFLESSGHATTPGLNLFNDLLKVDARKIFGEIEKGDHEVDLQ
Ga0209283_103693831	3300027875	Vadose Zone Soil	MGGRVALPPMSEEGKRAVVPLGFVRGLLDTIEKPMIVAERSGNLLLVNNRAKQFLESHGYATTPGLNLFNDLLRVDARKIFGAIEKGEHEMDLHIQRGEEKST
Ga0209590_103892411	3300027882	Vadose Zone Soil	MAGRIVMPPIAEEGNRASLPIGFVRGLLDTMEKPLIVAERSGRLLLVNTRARKFFESSGHATTPGLNLFNDLLKVDARKIFGEIEKGEHEVELQIQRGSEKSTARVQWMP
Ga0209488_100474092	3300027903	Vadose Zone Soil	MPPMSEEGNRAFLPIGFVRGLLDTIEKPLIVTERSGNLLLVNSRAKQFLESQGYTKTADLNLFKDLLQVDARKVFAEIEKGEHEVNLQIQGGESKSSVRVQ
Ga0209488_111402921	3300027903	Vadose Zone Soil	MAGRIVMPPIAEEGNRASLPIGFVRGLLDTMEKPLIVAERSGRLLLVNTRARQFLESSGHATTPGLNLFNDLLKVDARKIFGEIEKGEHEVELQIQRGSEKSTARVQW
Ga0209526_109343261	3300028047	Forest Soil	MEGRISTPPMPEEGNRTVLPLGFVSGLLDMIEKPLIVAERSGNLLFVNTRARKCMESRGYTAIQALNLFGDVLHVEPGKIFDKIEKGEHEVHLQIQRGDAKSTVRIQWMPEPDW
Ga0137415_110739501	3300028536	Vadose Zone Soil	MAGRIAMPPMSEENRVVLPLGFVRGLLDTIEKPLIVAERSGTLLLVNTRARQFLESHGYATIQVINLFSDLLQVDSRKIFGEIEKGEHEVDLQIQRGEAKSRVRVQWMP
Ga0137415_110765691	3300028536	Vadose Zone Soil	MPLGKTFTTPNEGRNHLMAGRIAMPPMSEENRVVLPLGFVRGLLDTIEKPLIVAERSGNLLLVNTRARQFLEAHGYATIQGINLFSDLLGVDSRKIFGGIEKGEHEVDLQIQRGEAKSRVRVQWMP
Ga0222749_102663112	3300029636	Soil	MEGRITTPPMPEEGNRTVLPLGFVSGLLDMIEKPLIVAERSGNLLFVNTRARKCMESRGYTAIQALNLFGDVLHVEPGKIFDKIERGEHEVHLQIQRGDAKSTVRIQWMPE
Ga0222749_107861021	3300029636	Soil	MAGRIVLPPMSEAGNRTALPLGYVLGILDTIDRPLIVAERSGNLILINTRAKQFLESSGHAISPSLNLFNDFLKVDSRKIFEEIEKGEHEVELQLRRGEVKS
Ga0307471_1000073631	3300032180	Hardwood Forest Soil	MAGRITVPPRSEEGSRTVLPLGYVTALLDTMEKPLIVAERSGNILMVNSRARQCLESRGYPAIQGTNLFSDFLHAEPRKIFDQIEKGEHQVHLQIQRGE
Ga0307472_1024106081	3300032205	Hardwood Forest Soil	MAGRITVPPRSEEGSRTVLPLGYVTALLDTMEKPLIVAERSGNILMVNSRARQCLESRGYPAIQGTNLFSDFLHAEPRKIFDQIEKGEHQVHLQIQRGEAK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F100853

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences