Metagenome / Metatranscriptome Family F100799

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F100799
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	46 residues
Representative Sequence	MKKKKATTKSAARKPAAKKPAGQRQAKTYTPKPLQGNGRAPFRYPPQ
Number of Associated Samples	93
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	31.37 %
% of genes from short scaffolds (< 2000 bps)	75.49 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.14

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (84.314 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (30.392 % of family members)
Environment Ontology (ENVO)	Unclassified (35.294 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (38.235 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
Feature Viewer

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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.14
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.14
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF00990	GGDEF	16.67
PF06224	HTH_42	7.84
PF01243	Putative_PNPOx	3.92
PF00202	Aminotran_3	1.96
PF02627	CMD	1.96
PF05593	RHS_repeat	1.96
PF06723	MreB_Mbl	1.96
PF03916	NrfD	0.98
PF00589	Phage_integrase	0.98
PF13247	Fer4_11	0.98
PF13592	HTH_33	0.98
PF02867	Ribonuc_red_lgC	0.98
PF05742	TANGO2	0.98
PF01042	Ribonuc_L-PSP	0.98
PF00561	Abhydrolase_1	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG3214	DNA glycosylase YcaQ, repair of DNA interstrand crosslinks	Replication, recombination and repair [L]	7.84
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	1.96
COG1077	Cell shape-determining ATPase MreB, actin-like superfamily	Cell cycle control, cell division, chromosome partitioning [D]	1.96
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	1.96
COG3209	Uncharacterized conserved protein RhaS, contains 28 RHS repeats	General function prediction only [R]	1.96
COG0209	Ribonucleotide reductase alpha subunit	Nucleotide transport and metabolism [F]	0.98
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.98
COG3332	Uncharacterized stress-responsive protein, TANGO2 (Transport and Golgi organisation 2) family, contains NRDE motif	General function prediction only [R]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.31 %
Unclassified	root	N/A	15.69 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	84.31 %
Unclassified	root	N/A	15.69 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.31 %
Unclassified	root	N/A	15.69 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	36.27 %
Unclassified	root	N/A	15.69 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.94 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.96 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.96 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	36.27 %
Unclassified	root	N/A	15.69 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.94 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.96 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.96 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	36.27 %
Unclassified	root	N/A	15.69 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.94 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.96 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.96 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	16.67 %
Unclassified	root	N/A	15.69 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.94 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.96 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.96 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	16.67 %
Unclassified	root	N/A	15.69 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.94 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.96 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918013\|NODE_5691_length_1018_cov_7.628684	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1050	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101945374	All Organisms → cellular organisms → Bacteria	2035	Open in IMG/M
3300000443\|F12B_11778193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	570	Open in IMG/M
3300000956\|JGI10216J12902_105951510	All Organisms → cellular organisms → Bacteria	1250	Open in IMG/M
3300002561\|JGI25384J37096_10090118	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1092	Open in IMG/M
3300004267\|Ga0066396_10073572	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300005093\|Ga0062594_101116137	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300005172\|Ga0066683_10200156	All Organisms → cellular organisms → Bacteria	1233	Open in IMG/M
3300005186\|Ga0066676_10110865	All Organisms → cellular organisms → Bacteria	1679	Open in IMG/M
3300005289\|Ga0065704_10794571	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	527	Open in IMG/M
3300005355\|Ga0070671_101501393	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	596	Open in IMG/M
3300005363\|Ga0008090_15398369	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1184	Open in IMG/M
3300005446\|Ga0066686_10853648	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300005451\|Ga0066681_10062919	All Organisms → cellular organisms → Bacteria → Proteobacteria	2056	Open in IMG/M
3300005540\|Ga0066697_10061004	All Organisms → cellular organisms → Bacteria	2153	Open in IMG/M
3300005568\|Ga0066703_10657974	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300005764\|Ga0066903_101679202	All Organisms → cellular organisms → Bacteria	1208	Open in IMG/M
3300006032\|Ga0066696_10104985	All Organisms → cellular organisms → Bacteria	1705	Open in IMG/M
3300006034\|Ga0066656_10832262	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	591	Open in IMG/M
3300006796\|Ga0066665_10222670	All Organisms → cellular organisms → Bacteria → Proteobacteria	1478	Open in IMG/M
3300006871\|Ga0075434_100404425	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1386	Open in IMG/M
3300007255\|Ga0099791_10108773	All Organisms → cellular organisms → Bacteria	1280	Open in IMG/M
3300007255\|Ga0099791_10553396	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	561	Open in IMG/M
3300009012\|Ga0066710_100081547	All Organisms → cellular organisms → Bacteria	4220	Open in IMG/M
3300009038\|Ga0099829_10166131	All Organisms → cellular organisms → Bacteria	1770	Open in IMG/M
3300009038\|Ga0099829_11139625	Not Available	646	Open in IMG/M
3300009088\|Ga0099830_10097892	All Organisms → cellular organisms → Bacteria	2184	Open in IMG/M
3300009088\|Ga0099830_10293565	Not Available	1296	Open in IMG/M
3300009089\|Ga0099828_11336189	Not Available	634	Open in IMG/M
3300009089\|Ga0099828_11361702	Not Available	627	Open in IMG/M
3300009137\|Ga0066709_102643475	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	671	Open in IMG/M
3300009795\|Ga0105059_1058249	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	531	Open in IMG/M
3300009815\|Ga0105070_1069556	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300010336\|Ga0134071_10173796	All Organisms → cellular organisms → Bacteria	1055	Open in IMG/M
3300010360\|Ga0126372_10362897	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1305	Open in IMG/M
3300010360\|Ga0126372_10575727	All Organisms → cellular organisms → Bacteria	1075	Open in IMG/M
3300010362\|Ga0126377_10362607	All Organisms → cellular organisms → Bacteria	1449	Open in IMG/M
3300010376\|Ga0126381_102499069	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300010868\|Ga0124844_1021502	All Organisms → cellular organisms → Bacteria	1892	Open in IMG/M
3300012189\|Ga0137388_10960887	Not Available	789	Open in IMG/M
3300012200\|Ga0137382_10793807	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300012202\|Ga0137363_11074989	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	684	Open in IMG/M
3300012203\|Ga0137399_10202910	All Organisms → cellular organisms → Bacteria	1610	Open in IMG/M
3300012203\|Ga0137399_11419702	Not Available	580	Open in IMG/M
3300012205\|Ga0137362_10005859	All Organisms → cellular organisms → Bacteria → Proteobacteria	8521	Open in IMG/M
3300012207\|Ga0137381_10224684	All Organisms → cellular organisms → Bacteria	1629	Open in IMG/M
3300012208\|Ga0137376_10982600	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300012349\|Ga0137387_10904416	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300012361\|Ga0137360_10234951	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1499	Open in IMG/M
3300012362\|Ga0137361_10280589	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1523	Open in IMG/M
3300012685\|Ga0137397_10552207	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	857	Open in IMG/M
3300012685\|Ga0137397_10710895	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	746	Open in IMG/M
3300012922\|Ga0137394_10078970	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2753	Open in IMG/M
3300012927\|Ga0137416_10674282	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	906	Open in IMG/M
3300012930\|Ga0137407_10097108	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2517	Open in IMG/M
3300012944\|Ga0137410_11741904	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	549	Open in IMG/M
3300015245\|Ga0137409_10581202	All Organisms → cellular organisms → Bacteria	949	Open in IMG/M
3300015357\|Ga0134072_10155230	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300015371\|Ga0132258_10005574	All Organisms → cellular organisms → Bacteria	24725	Open in IMG/M
3300015373\|Ga0132257_100241042	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2156	Open in IMG/M
3300017659\|Ga0134083_10112949	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1079	Open in IMG/M
3300017944\|Ga0187786_10309387	Not Available	651	Open in IMG/M
3300017947\|Ga0187785_10578927	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	573	Open in IMG/M
3300018063\|Ga0184637_10204966	Not Available	1209	Open in IMG/M
3300018074\|Ga0184640_10199303	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300018077\|Ga0184633_10032877	All Organisms → cellular organisms → Bacteria	2610	Open in IMG/M
3300018082\|Ga0184639_10031753	Not Available	2694	Open in IMG/M
3300018431\|Ga0066655_10032924	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2541	Open in IMG/M
3300018482\|Ga0066669_10321405	All Organisms → cellular organisms → Bacteria	1269	Open in IMG/M
3300019789\|Ga0137408_1207354	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1614	Open in IMG/M
3300021073\|Ga0210378_10022700	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2529	Open in IMG/M
3300025940\|Ga0207691_11450981	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300026296\|Ga0209235_1218375	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300026325\|Ga0209152_10003646	All Organisms → cellular organisms → Bacteria	5761	Open in IMG/M
3300026326\|Ga0209801_1363002	Not Available	510	Open in IMG/M
3300026351\|Ga0257170_1014155	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1011	Open in IMG/M
3300026354\|Ga0257180_1049461	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300026480\|Ga0257177_1016100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1032	Open in IMG/M
3300027169\|Ga0209897_1051199	Not Available	604	Open in IMG/M
3300027187\|Ga0209869_1035800	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300027324\|Ga0209845_1018870	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1133	Open in IMG/M
3300027846\|Ga0209180_10005480	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	6403	Open in IMG/M
3300027875\|Ga0209283_10754131	Not Available	603	Open in IMG/M
3300027961\|Ga0209853_1008813	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	3121	Open in IMG/M
3300028536\|Ga0137415_10329576	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1330	Open in IMG/M
3300028536\|Ga0137415_11154181	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	589	Open in IMG/M
3300031538\|Ga0310888_10074980	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1658	Open in IMG/M
3300031682\|Ga0318560_10721940	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300031720\|Ga0307469_10083876	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2170	Open in IMG/M
3300031740\|Ga0307468_101474294	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	629	Open in IMG/M
3300032089\|Ga0318525_10028657	All Organisms → cellular organisms → Bacteria	2698	Open in IMG/M
3300032180\|Ga0307471_100188688	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2045	Open in IMG/M
3300032211\|Ga0310896_10268240	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	870	Open in IMG/M
3300033811\|Ga0364924_047221	All Organisms → cellular organisms → Bacteria	912	Open in IMG/M
3300033812\|Ga0364926_085006	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300034114\|Ga0364938_048194	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300034354\|Ga0364943_0235905	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	680	Open in IMG/M
3300034417\|Ga0364941_007124	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2000	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.12%
Host-Associated	Host-Associated	5.88%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.22%
Plants	Host-Associated → Plants	5.88%
Aquatic	Environmental → Aquatic	4.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.31%
Floodplain	Environmental → Terrestrial → Floodplain	4.90%
Sediment	Environmental → Aquatic → Sediment	3.92%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.94%
Freshwater	Environmental → Aquatic → Freshwater	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	72.55%
Sand	Environmental → Terrestrial → Soil → Sand	5.88%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	4.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.92%
Loam	Environmental → Terrestrial → Soil → Loam	3.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.94%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.96%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.96%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	38.24%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	19.61%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.80%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	5.88%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	4.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.92%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.94%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.96%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.98%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.98%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.98%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	30.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	13.73%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.88%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	5.88%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	4.90%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.92%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.94%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.96%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.98%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.98%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918013	Soil microbial communities from Great Prairies - Iowa soil (MSU Assemblies)	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000443	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.2B clc assemly	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009795	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_40_50	Environmental	Open in IMG/M
3300009815	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026351	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-05-B	Environmental	Open in IMG/M
3300026354	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-B	Environmental	Open in IMG/M
3300026480	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-B	Environmental	Open in IMG/M
3300027169	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_10_20 (SPAdes)	Environmental	Open in IMG/M
3300027187	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_50_60 (SPAdes)	Environmental	Open in IMG/M
3300027324	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027961	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028673	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-B	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300033811	Sediment microbial communities from East River floodplain, Colorado, United States - 28_j17	Environmental	Open in IMG/M
3300033812	Sediment microbial communities from East River floodplain, Colorado, United States - 65_j17	Environmental	Open in IMG/M
3300034114	Sediment microbial communities from East River floodplain, Colorado, United States - 9_s17	Environmental	Open in IMG/M
3300034354	Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17	Environmental	Open in IMG/M
3300034417	Sediment microbial communities from East River floodplain, Colorado, United States - 17_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Iowa-Corn-GraphCirc_02067770	2140918013	Soil	MKKKKSSKTAARKPAAKKPAARRQTAATYTPKPVQGDGWAPFRYPPQ
INPhiseqgaiiFebDRAFT_1019453742	3300000364	Soil	MKKKKXTPKAAARKXAGKKXAAPKQAKSGXXXTPKPXQGNGWAPFRYPPX*
F12B_117781932	3300000443	Soil	MKKKRSTPKAAARKGAGKKSAAPKQAKSGASCTPKPLQGNGWAPFRYPPQ*
JGI10216J12902_1059515101	3300000956	Soil	AARKGAGKKSAAPKQAKSGASYTPKPLQGNGWAPFRYPPQ*
JGI25384J37096_100901181	3300002561	Grasslands Soil	MKKKKARTKSAARKPTAKKPAAQRQAVTYTPKPMQGNGWAPFR
Ga0066396_100735721	3300004267	Tropical Forest Soil	MKKKKSSKTAARKPAAKKPVARRQAAATYTPKPVQGDGWAPFRYPPQ*
Ga0062594_1011161372	3300005093	Soil	MKKKKSSKTAARKPAAKKPAARRQTAATYTPKPVQGDGWAPFRYPPQ*
Ga0066683_102001561	3300005172	Soil	KKKKKAATKSAARKTASRKPAAAKSAATYTPKPVGGTGWAPFRYPPQ*
Ga0066676_101108652	3300005186	Soil	MKKKKSAKTAARKPAAKKPAAQRQATTYTPKPVRGDGWAPFRYPPQ*
Ga0065704_107945712	3300005289	Switchgrass Rhizosphere	MKKKKSSKTAARKPAAKKPAARRQTAATYTPKPVQGDGWAP
Ga0070671_1015013932	3300005355	Switchgrass Rhizosphere	MKKKKATKAASRKRAGQKPAAPKQAKSAGTYTPKPVQGNGWAPFRYPPQ*
Ga0008090_153983691	3300005363	Tropical Rainforest Soil	MTKKKATKAASRKRADKKPAVPKQAKSAGTYTPKPLQGNGWAPFRYPPQ*
Ga0066686_108536481	3300005446	Soil	MKKKKKAATKAAQKTASRKPAAAKNAATYTPKPVGGTGWAPFRYPPQ*
Ga0066681_100629194	3300005451	Soil	MKKKKKAATKSAARKTASRKPAAAKSAPTYTPKPVGGTGWAPFRYPPQ*
Ga0066697_100610042	3300005540	Soil	MKKKKKAATKSAARKTASRKPAAAKSAATYTPKPVGGTGWAPFRYPPQ*
Ga0066703_106579742	3300005568	Soil	MKKKKSTPKAAARKRAGQKSAAPKQAKSAASYTPKPVQGNGWAP
Ga0066903_1016792022	3300005764	Tropical Forest Soil	MKKKKSSKTAARKPAAKKPAARRQAAATYTPKPVQGDGWAPFRYPPQ*
Ga0066696_101049853	3300006032	Soil	KAAARKRAGKKPAAPKPASSAATYTPKPLQGNGWAPFRYPPQ*
Ga0066656_108322622	3300006034	Soil	MKKKKARTKSAARKPTAKKPAAQRQAVTYTPKPMQGNG
Ga0066665_102226703	3300006796	Soil	MKKKKSTPKAAARKRAGQKSAAPKQAKSAASYTPKPVQGNGWARFRYPPQ*
Ga0075434_1004044253	3300006871	Populus Rhizosphere	MKKKKATKAASRKRAGQKPAAPKQAKSAGTYTPKPLQGNGWAPFRYPPQ*
Ga0099791_101087732	3300007255	Vadose Zone Soil	MKKKKKTTAKSAARKTASRKPAAKTAATYTPKPVGGTGWAPFRYPPQ*
Ga0099791_105533961	3300007255	Vadose Zone Soil	MKKKKATPKAAARKRAGKKPAAPKPAKSAATYTPKPLQGNGWA
Ga0066710_1000815473	3300009012	Grasslands Soil	MKKKKKAATKAARKTASRKPAAAKNAATYTPKPVGGTGWAPFRYPPQ
Ga0099829_101661312	3300009038	Vadose Zone Soil	MKKKKATTKSAARKPAAKKPAGQRQTKTYTPKSLQGNGRAPFRYPPQ*
Ga0099829_111396252	3300009038	Vadose Zone Soil	MKKKKATTKSAARKPAAKKPAGQRQAKTYTPKPLQGNGRTPFRYPPQ*
Ga0099830_100978923	3300009088	Vadose Zone Soil	MKKKKATTKSAARKPAAKKPAGQRQAKTYTPKPLQGNGRAPFRYPPQ*
Ga0099830_102935653	3300009088	Vadose Zone Soil	MMKKKATTKSAARKPAGERQAKTYTPKPLQGNGRAPFR
Ga0099828_113361891	3300009089	Vadose Zone Soil	MKKKKATTKSVARKPAGERQAKTYTPKPLQGNGRAPFRYPPQ*
Ga0099828_113617022	3300009089	Vadose Zone Soil	MKKKKATTKSAARKPAAKKPAGQRQATTYTPKSLQGNGRAPFRYPPQ*
Ga0066709_1026434751	3300009137	Grasslands Soil	MKKKKSTTKAAAPKRAGKKSAVPKQAKSAASYTPKPVQGNGWAPFRYPPQ*
Ga0105059_10582492	3300009795	Groundwater Sand	MKKKKPTTKSAARKAAAKKPPAKRQGVAYTPKPLQGDGWAPFRYPPQ*
Ga0105070_10695562	3300009815	Groundwater Sand	MKKKKATIKSAARKPAAKKPAGQRQARTYTPKPLQGNGRAPFRYPPQ*
Ga0134071_101737961	3300010336	Grasslands Soil	KAAARKRAGQKSAAPKQAKSAASYTPKPVQGNGWAPFRYPPQ*
Ga0126372_103628971	3300010360	Tropical Forest Soil	RMKKKKSSKTAARKPAAKKPVARRQAAATYTPKPVQGDGWAPFRYPPQ*
Ga0126372_105757272	3300010360	Tropical Forest Soil	MTKKKATKAASRKRAGQKPAAPKQAKSAGTYTPKPLQGNGWAPFRYPPQ*
Ga0126377_103626071	3300010362	Tropical Forest Soil	AAARKRAGKKPASPKPAKSAATYTPKPVQGNGWAPFRYPPQ*
Ga0126381_1024990691	3300010376	Tropical Forest Soil	MKKKKVTPKGAARKRAGKKPAQPKPAKSAATYTPKPLQGNGWAPFRYPPQ*
Ga0124844_10215023	3300010868	Tropical Forest Soil	KKKSSKTAARKPAAKKPVARRQAAATYTPKPVQGDGWAPFRYPPQ*
Ga0137388_109608871	3300012189	Vadose Zone Soil	MKKKKKATTKSVARKPAGERQAKTYTPKPLQGNGRAPFRYPPQ*
Ga0137382_107938072	3300012200	Vadose Zone Soil	STTKAAARKRAGKKSAVPKQAKSAASYTPKPVQGNGWAPFRYPPQ*
Ga0137363_110749891	3300012202	Vadose Zone Soil	MKKKKSTPKAAARKRAGQKSAAPKQAKSAASYTPKPVQGNGWAPF
Ga0137399_102029101	3300012203	Vadose Zone Soil	KKARTFFAARKPTTKKPAAQRQAVTYTPKPMQGNGWAPFRYPPQ*
Ga0137399_114197021	3300012203	Vadose Zone Soil	KSTTKAAVRKRAGKKSAAPKQAKSAASYTPKPVQGNGWAPFRYPPQ*
Ga0137362_100058592	3300012205	Vadose Zone Soil	MKKKKSTPKAAARKRAGRKPAAPKQAKSAASYTPKPVQGNGWAPFRYPPQ*
Ga0137381_102246842	3300012207	Vadose Zone Soil	MKKKKKATTKSAARKTASRKPAAAKSAPTYTPKPVGGTGWAPFRYPPQ*
Ga0137376_109826002	3300012208	Vadose Zone Soil	MKKKKKAATKSAARKTASRKPAAAKSAATYTPKPVGSTGWAPFRYPPQ*
Ga0137387_109044161	3300012349	Vadose Zone Soil	MKKKKKAATKSASRKTASRKPAAAKSAPTYTPKPVGGTGWAPFRYPPQ*
Ga0137360_102349512	3300012361	Vadose Zone Soil	MKKKKSTTKAAARKRAGRKPAAPKQAKSAASYTPKPVQGNGWAPFRYPPQ*
Ga0137361_102805892	3300012362	Vadose Zone Soil	MKKKKKTAAKSAVRKTASRKPAAKTAATYTPKPVGGTGWAPFRYPPQ*
Ga0137397_105522072	3300012685	Vadose Zone Soil	MKKKKSTTKAAARKRAGKKPAAPKQARSAGSYTPKPVEGNGWAPFRYPPQ*
Ga0137397_107108952	3300012685	Vadose Zone Soil	MKKKKATKAAAPKRAGKKPAAPKQAKSGGTYTPKPVQGNGWAPFRY
Ga0137394_100789702	3300012922	Vadose Zone Soil	MKKKKKAAAKSAARKTASRKPAAAKTAATYTPKPVGGTGWAPFRYPPQ*
Ga0137416_106742822	3300012927	Vadose Zone Soil	MKKKKKAAAKSAARKTVSRKPAAAKTAATYTPKPVGGTGWAPFRYPPQ*
Ga0137407_100971082	3300012930	Vadose Zone Soil	MKKKKSTTKAAARKRAGRKPAAPKQVKSAASYTPKPVQGNGWAPFRYPPQ*
Ga0137410_117419042	3300012944	Vadose Zone Soil	MKKKKATTKSAARNRAGKKPAAQKKTTTYTPKPLQGNGWAPFRYPPQ*
Ga0137409_105812021	3300015245	Vadose Zone Soil	KKKKATTKSAARNRAGKKPAAQKKTTTYTPKPLQGNGWAPFRYPPQ*
Ga0134072_101552302	3300015357	Grasslands Soil	MKKKKSTPKAAARKRAGQKSAAPKQAKSAASYTPKPVQGNGWAPFRYTPQ*
Ga0132258_100055747	3300015371	Arabidopsis Rhizosphere	MKKKKSSKTAARKTAAKKPAARRQAAATYTPKPVQGDGWAPFRYPPQ*
Ga0132257_1002410422	3300015373	Arabidopsis Rhizosphere	MKKKKATKAASRKRAGQKPAAPKQAKPAGTYTPKPLQGNGWGPLRYPPQ*
Ga0134083_101129492	3300017659	Grasslands Soil	MNKKKSAKTAARKPAAKKPAAQRQATTYTPKPVRGDGWAPFRYPPQ
Ga0187786_103093871	3300017944	Tropical Peatland	MKKKKATKAAARKPAGKRPTAPKQAKSAGTYTPKPLQGNGWAPFRYPPQ
Ga0187785_105789272	3300017947	Tropical Peatland	MKKKKATKAAVRKPAGKKPTAPKQAKSAGTYTPKPLQGNGWAPFRYPPQ
Ga0184637_102049662	3300018063	Groundwater Sediment	MKKKKATTKSAARKPAAKKPAGQRQAKTYTPKPLLGNGRAPFRYPPQ
Ga0184640_101993032	3300018074	Groundwater Sediment	MKKKKATTKSAARKPAPKKPAGQRQTKTYTPKPLQGNGRAPFRYPPQ
Ga0184633_100328776	3300018077	Groundwater Sediment	MKKKATTKSAARKPAPKKPAGQRQAKTYTPKPLQGNGRAPFRYPPQ
Ga0184639_100317531	3300018082	Groundwater Sediment	MKKKKATTKSAARKPAPKKPAGQRQAKTYTPKPLQGNGRAP
Ga0066655_100329244	3300018431	Grasslands Soil	MKKKKKAATKSAARKTASRKPAAAKSAATYTPKPVGGTGWAPFRYPPQ
Ga0066669_103214052	3300018482	Grasslands Soil	MKKKKKAATKSAARKTASRKPAAAKSAPTYTPKPVGGTGWAPFRYPPQ
Ga0137408_12073542	3300019789	Vadose Zone Soil	MKKKKSAKTAARKPAAKKPAAQRQATTYTPKPVRGDGWAPFRYPPQ
Ga0210378_100227006	3300021073	Groundwater Sediment	MKKKKATTKSAARKPVPKMPAGQRQAKTYTPKPLQGNGRAPFRYPPQ
Ga0207691_114509811	3300025940	Miscanthus Rhizosphere	KAAARKRAGKKPAAPKQAKSGGTYTPKPVQGNGWAPFRYPPQ
Ga0209235_12183752	3300026296	Grasslands Soil	MKKKKKTTAKSAARKTASRKPAAKTAATYTPKPVGGTGWAPFRYPPQ
Ga0209152_100036462	3300026325	Soil	MKKKKSTTKAAARKRAGQKSAAPKQAKSAASYTPKPVQGNGWAPFRYPPQ
Ga0209801_13630021	3300026326	Soil	MKKKKARTKSAARKTAKKPAAQRQAVTYTPKPMQGNGWAPFRYPPQ
Ga0257170_10141552	3300026351	Soil	MKKKKATTKSAARKPAAKKPAGQRQTKTYTPKSLQGNGRAPFRYPPQ
Ga0257180_10494612	3300026354	Soil	TTKAAARKRADKKPAAPKQAKSATTYTPKPLQGNGWAPFRYPPQ
Ga0257177_10161003	3300026480	Soil	MKKKKATTKSAARKPAGERQAKTYTPKPLQGNGRAPFRYPP
Ga0209897_10511991	3300027169	Groundwater Sand	MKKKKPTTKSAARKAAAKKPPAKRQGVAYTPKPLQGDGWAPFRYPPQ
Ga0209869_10358002	3300027187	Groundwater Sand	KSAARKAAAKKPRAKRQGVAYTPKPLQGDGWAPFRYPPQ
Ga0209845_10188702	3300027324	Groundwater Sand	MKRKKPRTKSAARKPTAKKPAAQKQAVTYTPKPLQGNGWAPFRY
Ga0209180_100054801	3300027846	Vadose Zone Soil	MKKKKATTKSAARKPAAKKPAGQRQAKTYTPKPLQGNGRTPFRYPPQ
Ga0209283_107541312	3300027875	Vadose Zone Soil	MKKKKATTKSAARKPAAKKPAGQRQATTYTPKSLQGNGRAPFRYPPQ
Ga0209853_10088131	3300027961	Groundwater Sand	MKKKKPTTKSAARKAAAKKPPAKRQGVAYTPKPLQGDG
Ga0137415_103295762	3300028536	Vadose Zone Soil	MKKKKKAAAKSAARKTVSRKPAAAKTAATYTPKPVGGTGWAPFRYPPQ
Ga0137415_111541811	3300028536	Vadose Zone Soil	MKRKKARTKSAARKPTAKKPAAPKQAVTYTPKPLQGNGWAP
Ga0257175_11258382	3300028673	Soil	RKRADKKPAAPKQAKSATTYTPKPLQGNGWAPFRYPPQ
Ga0307499_100357952	3300031184	Soil	AGKKPATPKQAKSGGTYTPKPVQGNGWAPFRYPPQ
Ga0310888_100749802	3300031538	Soil	MKKKRATPKAAARKRVSKKAAAPKQAKPAATYTPKPVQGNGWAPFRYPPQ
Ga0318560_107219401	3300031682	Soil	TKAASRKRADKKPAAPKQAKSAGTYTPKPLQGNGWAPFRYPPQ
Ga0307469_100838762	3300031720	Hardwood Forest Soil	MKKKKKVATKSAARKTGSRKPAAAKSAPTYTPKPVGGTGWAPFRYPPQ
Ga0307469_101629661	3300031720	Hardwood Forest Soil	AGKKPAAPKQARSAGSYTPKPVEGNGWAPFRYPPQ
Ga0307468_1014742941	3300031740	Hardwood Forest Soil	MKKKKSPKTAARKAAAKKPAARRPVSTYTPKPVQGDGWAPFRYPPQ
Ga0310901_103026151	3300031940	Soil	VSKKAAAPKQAKPAATYTPKPVQGNGWAPFRYPPQ
Ga0318525_100286574	3300032089	Soil	KAAARKPAGKKPAQPKPAKSAATYTPKPLQGNGWAPFRYPPQ
Ga0307471_1001886881	3300032180	Hardwood Forest Soil	MKRKKKTTAKSAARKTASRKPAAAKTAATYTPKPVGGTGW
Ga0310896_102682401	3300032211	Soil	MKKKRATPKAAARKRVSKKAAAPKQAKPAATYTPKPVQGNGWAPFRY
Ga0364924_047221_428_565	3300033811	Sediment	MKKKKATTTARKPAAKKPAGQRQAKTYTPKPLQGNGRAPFRYPPQ
Ga0364926_085006_283_426	3300033812	Sediment	MKKKKATTKSAARKPAPKKPAGQRQAKTYTPKPLQGNGRAPFRYPPQ
Ga0364938_048194_588_731	3300034114	Sediment	MKKKKATTKSAVRKPADKTSAGQRQAKTYTPKPLQGNGRAPFRYPPQ
Ga0364943_0235905_226_366	3300034354	Sediment	MKKKKSPKTPARKAASKKPAARRPASTYRPKPVQGDGWAPFRYPPQ
Ga0364941_007124_995_1135	3300034417	Sediment	MKKKKSPKTPARKAASKKPAARRPASTYTPKPVQGDGWAPFRYPPQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F100799

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences