NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F100758

Metagenome Family F100758

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F100758
Family Type Metagenome
Number of Sequences 102
Average Sequence Length 47 residues
Representative Sequence MSRAKEAAISFNISKTELIHFYSKRTTIEEGLKLGDIEISPKPLVR
Number of Associated Samples 33
Number of Associated Scaffolds 101

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Eukaryota
% of genes with valid RBS motifs 71.57 %
% of genes near scaffold ends (potentially truncated) 32.35 %
% of genes from short scaffolds (< 2000 bps) 63.73 %
Associated GOLD sequencing projects 31
AlphaFold2 3D model prediction Yes
3D model pTM-score0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Eukaryota (54.902 % of family members)
NCBI Taxonomy ID 2759
Taxonomy All Organisms → cellular organisms → Eukaryota

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(45.098 % of family members)
Environment Ontology (ENVO) Unclassified
(51.961 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(72.549 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 48.65%    β-sheet: 0.00%    Coil/Unstructured: 51.35%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.42
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 101 Family Scaffolds
PF00078RVT_1 2.97
PF14529Exo_endo_phos_2 0.99
PF14269Arylsulfotran_2 0.99
PF04389Peptidase_M28 0.99
PF08613Cyclin 0.99



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms59.80 %
UnclassifiedrootN/A40.20 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2040502001|FACENC_GAMC6GA01BYTMYNot Available526Open in IMG/M
3300006797|Ga0066659_11127295Not Available656Open in IMG/M
3300007788|Ga0099795_10046072All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Sordariomycetes → Hypocreomycetidae → Hypocreales → Ophiocordycipitaceae → Hirsutella → Hirsutella minnesotensis → Hirsutella minnesotensis 36081570Open in IMG/M
3300007788|Ga0099795_10372387All Organisms → cellular organisms → Eukaryota → Opisthokonta643Open in IMG/M
3300012199|Ga0137383_10773612Not Available701Open in IMG/M
3300012199|Ga0137383_11373153Not Available501Open in IMG/M
3300012202|Ga0137363_10035999Not Available3455Open in IMG/M
3300012202|Ga0137363_10215828All Organisms → cellular organisms → Eukaryota → Opisthokonta1546Open in IMG/M
3300012202|Ga0137363_11153031All Organisms → cellular organisms → Bacteria659Open in IMG/M
3300012202|Ga0137363_11785003All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → Eurotiomycetes → Eurotiomycetidae → Eurotiales → Elaphomycetaceae → Elaphomyces → Elaphomyces granulatus508Open in IMG/M
3300012205|Ga0137362_10389878Not Available1206Open in IMG/M
3300012206|Ga0137380_10795195All Organisms → cellular organisms → Eukaryota → Opisthokonta817Open in IMG/M
3300012207|Ga0137381_10306995Not Available1382Open in IMG/M
3300012207|Ga0137381_11478981All Organisms → cellular organisms → Eukaryota → Opisthokonta571Open in IMG/M
3300012207|Ga0137381_11780673Not Available505Open in IMG/M
3300012209|Ga0137379_10563602Not Available1046Open in IMG/M
3300012209|Ga0137379_11088541Not Available705Open in IMG/M
3300012209|Ga0137379_11141380Not Available685Open in IMG/M
3300012209|Ga0137379_11598845Not Available551Open in IMG/M
3300012209|Ga0137379_11754980Not Available516Open in IMG/M
3300012211|Ga0137377_11937296Not Available506Open in IMG/M
3300012349|Ga0137387_10870063Not Available652Open in IMG/M
3300012351|Ga0137386_11026988All Organisms → cellular organisms → Eukaryota585Open in IMG/M
3300012351|Ga0137386_11132403Not Available551Open in IMG/M
3300012357|Ga0137384_10975948All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → Eurotiomycetes → Eurotiomycetidae → Eurotiales → Elaphomycetaceae → Elaphomyces → Elaphomyces granulatus681Open in IMG/M
3300012357|Ga0137384_11147129Not Available620Open in IMG/M
3300012357|Ga0137384_11270523Not Available582Open in IMG/M
3300012357|Ga0137384_11508700All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Sordariomycetes → Hypocreomycetidae → Hypocreales → Ophiocordycipitaceae → Hirsutella → Hirsutella minnesotensis → Hirsutella minnesotensis 3608521Open in IMG/M
3300012359|Ga0137385_10544337All Organisms → cellular organisms → Eukaryota980Open in IMG/M
3300012359|Ga0137385_10575757All Organisms → cellular organisms → Eukaryota → Opisthokonta948Open in IMG/M
3300012359|Ga0137385_10584668Not Available940Open in IMG/M
3300012359|Ga0137385_10647982All Organisms → cellular organisms → Eukaryota885Open in IMG/M
3300012359|Ga0137385_10657367Not Available877Open in IMG/M
3300012359|Ga0137385_10730450All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Sordariomycetes → Hypocreomycetidae → Hypocreales → Ophiocordycipitaceae → Hirsutella → Hirsutella minnesotensis → Hirsutella minnesotensis 3608826Open in IMG/M
3300012359|Ga0137385_10731055Not Available825Open in IMG/M
3300012359|Ga0137385_11510657Not Available535Open in IMG/M
3300012359|Ga0137385_11633798Not Available508Open in IMG/M
3300012361|Ga0137360_11284567Not Available632Open in IMG/M
3300012582|Ga0137358_10857351Not Available599Open in IMG/M
3300012685|Ga0137397_10226809All Organisms → cellular organisms → Eukaryota → Opisthokonta1391Open in IMG/M
3300012924|Ga0137413_11471999Not Available552Open in IMG/M
3300012925|Ga0137419_10931790Not Available717Open in IMG/M
3300012929|Ga0137404_10650312All Organisms → cellular organisms → Eukaryota → Opisthokonta951Open in IMG/M
3300015053|Ga0137405_1285934All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → Eurotiomycetes → Eurotiomycetidae → Eurotiales → Elaphomycetaceae → Elaphomyces → Elaphomyces granulatus568Open in IMG/M
3300015241|Ga0137418_10032029All Organisms → cellular organisms → Eukaryota → Opisthokonta4868Open in IMG/M
3300019789|Ga0137408_1189832All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Sordariomycetes → Hypocreomycetidae → Hypocreales → Ophiocordycipitaceae → Hirsutella → Hirsutella minnesotensis → Hirsutella minnesotensis 36081585Open in IMG/M
3300019789|Ga0137408_1229171Not Available1979Open in IMG/M
3300019890|Ga0193728_1001079All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Sordariomycetes → Hypocreomycetidae → Hypocreales → Ophiocordycipitaceae → Hirsutella → Hirsutella minnesotensis → Hirsutella minnesotensis 360813712Open in IMG/M
3300019890|Ga0193728_1003094Not Available8501Open in IMG/M
3300019890|Ga0193728_1004571All Organisms → cellular organisms → Eukaryota → Opisthokonta7047Open in IMG/M
3300019890|Ga0193728_1005309All Organisms → cellular organisms → Eukaryota → Opisthokonta6538Open in IMG/M
3300019890|Ga0193728_1020234All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Sordariomycetes → Hypocreomycetidae → Hypocreales → Ophiocordycipitaceae → Hirsutella → Hirsutella minnesotensis → Hirsutella minnesotensis 36083337Open in IMG/M
3300019890|Ga0193728_1022721Not Available3138Open in IMG/M
3300019890|Ga0193728_1024018Not Available3042Open in IMG/M
3300019890|Ga0193728_1198031All Organisms → cellular organisms → Eukaryota → Opisthokonta845Open in IMG/M
3300020582|Ga0210395_11319648Not Available528Open in IMG/M
3300021181|Ga0210388_10523003All Organisms → cellular organisms → Eukaryota → Opisthokonta1041Open in IMG/M
3300024290|Ga0247667_1060179All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Leotiomycetes → Helotiales → Sclerotiniaceae → Sclerotinia → Sclerotinia sclerotiorum703Open in IMG/M
3300026557|Ga0179587_10707587All Organisms → cellular organisms → Eukaryota → Opisthokonta664Open in IMG/M
3300027559|Ga0209222_1031260All Organisms → Viruses → Predicted Viral1030Open in IMG/M
3300027684|Ga0209626_1050083All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Sordariomycetes → Hypocreomycetidae → Hypocreales → Ophiocordycipitaceae → Hirsutella → Hirsutella minnesotensis → Hirsutella minnesotensis 36081045Open in IMG/M
3300028794|Ga0307515_10001615All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina50259Open in IMG/M
3300028794|Ga0307515_10001656All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes → Pleosporomycetidae49620Open in IMG/M
3300028794|Ga0307515_10003713All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina32032Open in IMG/M
3300028794|Ga0307515_10004014All Organisms → cellular organisms → Eukaryota → Opisthokonta30720Open in IMG/M
3300028794|Ga0307515_10004803All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes → Pleosporomycetidae → Pleosporales → Sporormiaceae → Westerdykella → Westerdykella ornata27673Open in IMG/M
3300028794|Ga0307515_10004803All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes → Pleosporomycetidae → Pleosporales → Sporormiaceae → Westerdykella → Westerdykella ornata27673Open in IMG/M
3300028794|Ga0307515_10005000All Organisms → cellular organisms → Eukaryota → Opisthokonta27055Open in IMG/M
3300028794|Ga0307515_10005401All Organisms → cellular organisms → Eukaryota25898Open in IMG/M
3300028794|Ga0307515_10008165All Organisms → cellular organisms → Eukaryota → Opisthokonta20502Open in IMG/M
3300028794|Ga0307515_10011863All Organisms → cellular organisms → Eukaryota → Opisthokonta16476Open in IMG/M
3300028794|Ga0307515_10013713All Organisms → cellular organisms → Eukaryota → Opisthokonta15103Open in IMG/M
3300028794|Ga0307515_10016915Not Available13331Open in IMG/M
3300028794|Ga0307515_10022352All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Sordariomycetes → Hypocreomycetidae → Hypocreales → Ophiocordycipitaceae → Hirsutella → Hirsutella minnesotensis → Hirsutella minnesotensis 360811150Open in IMG/M
3300028794|Ga0307515_10045661All Organisms → cellular organisms → Eukaryota6721Open in IMG/M
3300028794|Ga0307515_10051824All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes → Dothideomycetes incertae sedis → Zopfiaceae → Zopfia → Zopfia rhizophila → Zopfia rhizophila CBS 207.266106Open in IMG/M
3300028794|Ga0307515_10057334All Organisms → cellular organisms → Bacteria5638Open in IMG/M
3300028794|Ga0307515_10057687All Organisms → cellular organisms → Eukaryota → Opisthokonta5614Open in IMG/M
3300028794|Ga0307515_10079271All Organisms → cellular organisms → Eukaryota → Opisthokonta4304Open in IMG/M
3300028794|Ga0307515_10085695All Organisms → cellular organisms → Eukaryota → Opisthokonta4027Open in IMG/M
3300028794|Ga0307515_10102086All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → Eurotiomycetes → Eurotiomycetidae → Eurotiales → Elaphomycetaceae → Elaphomyces → Elaphomyces granulatus3454Open in IMG/M
3300028794|Ga0307515_10124482All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Sordariomycetes → Hypocreomycetidae → Hypocreales → Ophiocordycipitaceae → Hirsutella → Hirsutella minnesotensis → Hirsutella minnesotensis 36082892Open in IMG/M
3300028794|Ga0307515_10127123All Organisms → cellular organisms → Eukaryota → Opisthokonta2837Open in IMG/M
3300028794|Ga0307515_10159478All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina2309Open in IMG/M
3300028794|Ga0307515_10241622All Organisms → cellular organisms → Eukaryota → Opisthokonta1575Open in IMG/M
3300028794|Ga0307515_10333650All Organisms → cellular organisms → Bacteria1173Open in IMG/M
3300028794|Ga0307515_10376639All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Sordariomycetes → Hypocreomycetidae → Hypocreales → Ophiocordycipitaceae → Hirsutella → Hirsutella minnesotensis → Hirsutella minnesotensis 36081053Open in IMG/M
3300028794|Ga0307515_10523365All Organisms → cellular organisms → Eukaryota → Opisthokonta795Open in IMG/M
3300028794|Ga0307515_10528916Not Available789Open in IMG/M
3300031838|Ga0307518_10026168All Organisms → cellular organisms → Eukaryota → Opisthokonta4211Open in IMG/M
3300031838|Ga0307518_10030720All Organisms → cellular organisms → Eukaryota → Opisthokonta3892Open in IMG/M
3300031838|Ga0307518_10082757Not Available2316Open in IMG/M
3300031838|Ga0307518_10158675All Organisms → cellular organisms → Bacteria1557Open in IMG/M
3300031838|Ga0307518_10191840Not Available1368Open in IMG/M
3300031838|Ga0307518_10279690Not Available1034Open in IMG/M
3300031838|Ga0307518_10298286All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → Eurotiomycetes → Eurotiomycetidae → Eurotiales → Elaphomycetaceae → Elaphomyces → Elaphomyces granulatus982Open in IMG/M
3300031838|Ga0307518_10307922Not Available957Open in IMG/M
3300033179|Ga0307507_10001352All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina54855Open in IMG/M
3300033179|Ga0307507_10003529All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Sordariomycetes30050Open in IMG/M
3300033179|Ga0307507_10453529Not Available707Open in IMG/M
3300033179|Ga0307507_10622207Not Available553Open in IMG/M
3300033179|Ga0307507_10653374Not Available533Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil45.10%
EctomycorrhizaHost-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza40.20%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil7.84%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.94%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.96%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.98%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.98%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2040502001Soil microbial communities from sample at FACE Site 2 North Carolina CO2+EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300007788Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2EnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015053Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300019789Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300019890Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1EnvironmentalOpen in IMG/M
3300020582Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-OEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300024290Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK08EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027559Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O3 (SPAdes)EnvironmentalOpen in IMG/M
3300027684Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300028794Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EMHost-AssociatedOpen in IMG/M
3300031838Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EMHost-AssociatedOpen in IMG/M
3300033179Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EMHost-AssociatedOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
FACENCE_25488502040502001SoilMARAKEAAISFDISKTELIYFYSKRTTIEEGLKLGDIEIPLNP
Ga0066659_1112729513300006797SoilMSKAKEAAISFNVSKIELIYFYNKYTTIEEGLKLGDTEISPKPLVRWLGIFLDLKLTFK*
Ga0099795_1004607213300007788Vadose Zone SoilMSKAKEAAISFNVSKIELIYFYSKRTTIKEGLKLGDIEISPKPLV*
Ga0099795_1037238713300007788Vadose Zone SoilMSKAKEAAISFDVSKTELIHFYSKRTTIEEGLKLGDIEISPKPLVR*
Ga0137383_1077361223300012199Vadose Zone SoilMSKAKEAAISFDVSKIELIQFYNKHITIEEGLKLRDIKISPKPLVK*
Ga0137383_1137315323300012199Vadose Zone SoilMSRAKETTISFDISKTELIYFHNKRTTIEEGLMLG
Ga0137363_1003599913300012202Vadose Zone SoilMSRAKEATISFNISKIELIHFYNKYTTIEEGLKLRDIEISPKLLVR*
Ga0137363_1021582813300012202Vadose Zone SoilMSKAKEAAISFDVSKIELIYFYSKRTTIEEGLKLGDVEISPKPLV*
Ga0137363_1115303113300012202Vadose Zone SoilAKEATISFNISKIELIHFYSKQTTIEEGLKLGDVEISPKPLVR*
Ga0137363_1178500313300012202Vadose Zone SoilMSKAKEAAISFDVSKTELIHFYNKRTTIEEGLKLGDVEI
Ga0137362_1038987813300012205Vadose Zone SoilKLERIALELISKAKEATISFNASKTELIHFYNKRTTIEEGLKLGDIEISPKLLVR*
Ga0137380_1079519513300012206Vadose Zone SoilMSRAKKAAISFDVSKTELIYFYNKRITIEEGLKLGDIKISPKPLVR*
Ga0137381_1030699523300012207Vadose Zone SoilMFKAKETTISFNISKTKLIYFYNKRTIIEKGLKLKDIEISPKPLVRWLGVFLDSKLTFK*
Ga0137381_1147898113300012207Vadose Zone SoilMSRAKEAVISFDVSKTELIHFYNKRITIEEGLKLRDIKISLKPLVRWLGVFLDSKLTFK*
Ga0137381_1178067313300012207Vadose Zone SoilMDKAKEIVISFNIDKTKFIYFYNKHTTIENGLKLKDTEISSKPLIR*
Ga0137379_1056360213300012209Vadose Zone SoilMSRAKEAAISFDIGKTELIHFYNKRTTIEERLKLGDVEISPKPLVR*
Ga0137379_1108854113300012209Vadose Zone SoilAISFDVGKTELIHFYNKRTTIEEGLKLGDTEISPKPLVR*
Ga0137379_1114138013300012209Vadose Zone SoilMARAKEAVISFNISKTKLIYFYNKRTIIEEGLKLGDIKISPKPLVR*
Ga0137379_1159884513300012209Vadose Zone SoilLEEIALKLMAKAKEAVISFDISKIKLIYFYNKCIIIKEGLKLGDIKISPKPLVR*
Ga0137379_1175498013300012209Vadose Zone SoilMAKAKEAVISFNISKIELIYFYNKRIIIEEGLKLRDIKISPKPLVR*
Ga0137377_1193729613300012211Vadose Zone SoilMSKAKEAAISFNIGKTELIHFYNKHTTIEEGLKLGDTEISPKPLVR*
Ga0137387_1087006313300012349Vadose Zone SoilMAKAKEAIISFDISKTKLIYFYNKRIIIEEGLKLGDIKISPKPLVR*
Ga0137386_1102698813300012351Vadose Zone SoilMAKAKEAIISFNINKTKLIYFYNKLIIIKEGLKLKDIEITPKSLVR*
Ga0137386_1113240313300012351Vadose Zone SoilAAISFNISKTKLIYFYNKHITIKEGLKLGDIKISPKPLVR*
Ga0137384_1097594813300012357Vadose Zone SoilFNIGKTELIYFYNKYTTIEEGLKLGDIEISPKLLVRWLGVFLDSKLTFK*
Ga0137384_1114712913300012357Vadose Zone SoilMAKAKEAVISFDISKTELIHFYNKCIIIEEGLKLG
Ga0137384_1127052313300012357Vadose Zone SoilMSKAKETTISFDISKTELIHFYNKHTTIEEGLKLGDTEISPKPLVR*
Ga0137384_1150870023300012357Vadose Zone SoilMSKAKETAISFNIGKTELIHFYNKHTTIKKGLKLGDTEISPKPLVR*
Ga0137385_1054433713300012359Vadose Zone SoilMVRVKEAAINFNISKTEFIHFYNKHIIIKEGLKLGD
Ga0137385_1057575713300012359Vadose Zone SoilAKEAVISFDIGKTELIHFYNKHTTIEEGLKLGDTEISPKPLVR*
Ga0137385_1058466823300012359Vadose Zone SoilMAKAKEVVISFNINKIELIYFYNKRIIIEKGLKLGDIKISPKPPVR*
Ga0137385_1064798213300012359Vadose Zone SoilMGKAKEAVISFDISKTKLIYFYNKYIIIKEGLKLGDIKILFKPLVR*
Ga0137385_1065736713300012359Vadose Zone SoilMSRAKEAVISFDVSKIELIHFYNKRITIEEGLKLGDIKIPPKPLVR*
Ga0137385_1073045013300012359Vadose Zone SoilMSKAKEAVISFDVSKTKLIYFYNKCITIKEGLKLGDIKISLKPLVRWLGVFLDSKLIFK*
Ga0137385_1073105523300012359Vadose Zone SoilMAKAKEAIISFNISKIKLIYFYNKYIIIKEGLNLKDIKISPKPLVR*
Ga0137385_1151065723300012359Vadose Zone SoilMSKAKETTISFDIGKTKLIHFYNKHITIEKGLKLRDTKISPKPLVR*
Ga0137385_1163379813300012359Vadose Zone SoilISKAKETAISFNIGKTELIHFYNKRTTIEEGLKLGDTEISLKPLVRWLRIFLNLKLIFK*
Ga0137360_1128456713300012361Vadose Zone SoilLQKARGNSAKANISSNISKIELIYFYSKRTTIEEGLKLGDIEIPLKPLVRWLEVFLDSK
Ga0137358_1085735113300012582Vadose Zone SoilMSKAKEAAISFNDSKIELIYFYSKRTTIEEGLQLGDVEISPKPLV*
Ga0137397_1022680913300012685Vadose Zone SoilMSKPKEAAISFNVSKIELIYFYSKRTTIEEGLKLGDVEISPKPLV*
Ga0137413_1147199913300012924Vadose Zone SoilAKEAAISFDISKIELIYFYIKRTAIEEGLKIGAIEISPKPLVR*
Ga0137419_1093179013300012925Vadose Zone SoilMSRAKEATISFNTSKIELIYFYSKRTTIKEGLKLGDIEISPKPLV*
Ga0137404_1065031213300012929Vadose Zone SoilMSKAKEAAISFDVSKIELIYFYSKRTTIKEGLKLGDIEISPKPLV*
Ga0137405_128593413300015053Vadose Zone SoilAAISFDVSKTELIHFYNKRTTIEEGLKLGDVEISYPLNP*
Ga0137418_1003202923300015241Vadose Zone SoilMSKAKEAAISFNVSKIELIYFYSKRTTIEEGLKLGDVEISPKPLV*
Ga0137408_118983213300019789Vadose Zone SoilMSRAKEATISFNISKIELIHFYNKYTTIEEGLKLRDIEISPKLLVR
Ga0137408_122917113300019789Vadose Zone SoilMSKAKEAAISFNVSKIELIYFYSKRTTIEEGLKLGDVEISPKPLV
Ga0193728_100107923300019890SoilMSRANKAAISFNISKIELIHFYSKRTTIEEGLKLGAIEISPKPLVR
Ga0193728_100309423300019890SoilMSRAKEATISFNISKAELIYFYSKRTTIEEGLKLEDIKISPKPLVR
Ga0193728_100457113300019890SoilDISKTELIHFYSKRTTIEEGLKLGDIEISPKPLVRWLGVFLDSKLTFK
Ga0193728_100530913300019890SoilMSRAKEAAISFNISKTELIHFYSKRTTIEEGLKLGDIENPLNP
Ga0193728_102023423300019890SoilMSRAKEAAISFNISKIEFIHFYSKRTTIEKGLKLGAIEISLKPLVR
Ga0193728_102272133300019890SoilAAISFDISKIELIHFYSKRTTIEEGLKLGDIEISPKPLVR
Ga0193728_102401813300019890SoilMSRAKEAAISFNISKIELIYFYSKRTTIEERLKLGAIEISPKPLVR
Ga0193728_119803113300019890SoilMSRAKEVAISFDISKTELVHFYSKRTTIDEGLKLGDIEISPKPL
Ga0210395_1131964813300020582SoilKLKGIVLKLMFKAKEATISFNIGKTELIYLYNKYTTIEEGLKLGDTEISPKPLVRWLGVFLDSKLTFK
Ga0210388_1052300313300021181SoilMSRAKEAAISFNIGKTELIHFYNKRTTIEEGLKLRDIEISPKPLVR
Ga0247667_106017913300024290SoilMSKAKEAAISFDVSKTELIHFYNKRITIKEGLKLGDI
Ga0179587_1070758713300026557Vadose Zone SoilMSRAKEAAISFNISKTELIHFYSKRTTIEEGLKLGDIEISPKPLVRWLGVFLDS
Ga0209222_103126013300027559Forest SoilMGVSRNTAISFNVSKTELIHFYSKRTTIEEGLKLGDVEISPKPLVRWLGVFLDS
Ga0209626_105008313300027684Forest SoilMSRAKEAAISFNISKTELIHFYSKRTTIEEGLKLGDVEISPKPLVR
Ga0307515_1000161573300028794EctomycorrhizaMSKAKEAAISFNISKIELIHFYNKRTTIEEGLKLGDIEISPKPLVR
Ga0307515_10001656383300028794EctomycorrhizaMSKAKEAAISFDISKIELIHFYSKRTTIEEGLKLGDVEIPHKTLVR
Ga0307515_1000371393300028794EctomycorrhizaMSKAKEAAISFNIGKIELIYFYNKRTTIEEGLKLGDVEISPKPLVR
Ga0307515_1000401463300028794EctomycorrhizaELISKAKEAAISFNIGKIKLIHFYNKRTTIEEGLKLGDVEISPKPLVR
Ga0307515_1000480313300028794EctomycorrhizaMSRAKEAAISFNISKIELIHFYSKRTTIEEGLKLRDIEISPKPLVR
Ga0307515_1000480323300028794EctomycorrhizaMSKAKEAAISFNVSKIELIYFYSKRTTIEEGLKLGDVEISPKPLVRWLRVFLNSKLTFK
Ga0307515_1000500023300028794EctomycorrhizaMARAKEAAISFNISKTELIYFYSQRTTIEEGLKLGDVEISPKPLVK
Ga0307515_1000540143300028794EctomycorrhizaMSRAKEAAISFNISKTELIYFYSKRTTIEEGLKLGDVEISPKPLVR
Ga0307515_1000816523300028794EctomycorrhizaMSRAKEAAISFDISKTELIHFYSKRTTIEEGLKLGDIEISPKPLVR
Ga0307515_1001186313300028794EctomycorrhizaMSKAKEAAISFDISKTELIHFYSKRTTIEERLKLGDVEIPPKTLVK
Ga0307515_1001371343300028794EctomycorrhizaMSRAKEAAISFNISKIELIYFYSKRTTIEEGLKLGDIEISPKPLVRWLGVFLDSKLTFK
Ga0307515_1001691513300028794EctomycorrhizaMSRAKEAAISFNISKTELIHFYSKRTTIEEGLKLGDIEISPKPLVR
Ga0307515_1002235233300028794EctomycorrhizaMSRAKEAAISFNISKTELIHFYSKHTTIKEGLKLGDVEISPKPLVR
Ga0307515_1004566113300028794EctomycorrhizaMSKAKEAAISFNISKTELIHLYSKRTTIKEGLKLGDVEIPPETLVR
Ga0307515_1005182443300028794EctomycorrhizaVSRAKEAAISFNISKIELIHFYSKRTTIEEGLKLGDIEIS
Ga0307515_1005733413300028794EctomycorrhizaMSKAKEATISFNISKTELIYFYSKRTTIKEGLKLGDIEISPKPLVR
Ga0307515_1005768723300028794EctomycorrhizaMSRAKEAAISFNISKIELIHFYNKRTTIEEGLKLGDVEISPKPLVR
Ga0307515_1007927113300028794EctomycorrhizaMSKAKEAAISFDVSKTELIHFHSKRTTIEEGLKLGDIEICPKPLVR
Ga0307515_1008569513300028794EctomycorrhizaMSKAKEAAISFDVSKTELIHFYSKRTTIEKGLKLGDIEISPKPLVRWLGVF
Ga0307515_1010208613300028794EctomycorrhizaMSKAKEAAISFDIGKIELTHFYNKRTTIEDGLKLGDVEISPKPLVRWLGVFLDSKLAFK
Ga0307515_1012448223300028794EctomycorrhizaMSKAKEAAISFNISKTELIHFYSKRTTIKEGLKLRDVEIPPKTLVR
Ga0307515_1012712333300028794EctomycorrhizaMSKAKEAAISFNVSKTKLIHFYSKRTTIEEGLKLGDVEISPKPLVR
Ga0307515_1015947813300028794EctomycorrhizaMSRAKEAAISFNIGKIELIYFYNKRTTIEEGLKLGDVEISPKPLVR
Ga0307515_1024162213300028794EctomycorrhizaMSKAKEAAISFDVSKTELIHFYSKRTTIEEGLKLGDVEISPKPLVR
Ga0307515_1033365013300028794EctomycorrhizaMSRAKEAAISFNISKTELIHFYSKRTTIKEGLKLEDIEISPKPLVR
Ga0307515_1037663913300028794EctomycorrhizaMSRAKEAAISFNISKIELIHFYSKRTTIEEGLKLGDIEISPKPLVR
Ga0307515_1052336513300028794EctomycorrhizaMSKAKEAAISFNVSKTELIYFYSKRTTIEEGLKLGDVEISPKPLVRWLGVFLDSKLTFK
Ga0307515_1052891613300028794EctomycorrhizaMSRAKEAAISFNISKTELIYFYSKRTTIEEGLKLGDIEISPKPLVR
Ga0307518_1002616813300031838EctomycorrhizaMSKAKEAVISFDISKTELIYFYSKRTTIEEGLKLGDLEISLKPLVR
Ga0307518_1003072013300031838EctomycorrhizaMSKAKEVTISFDIGKIEFIYFYNKYTTIKEGLKLGDIKISPKPLVR
Ga0307518_1008275723300031838EctomycorrhizaVLKLISKAKEIVISFNISKIEFIYFYSKCITIKKKGLKLGDLEISPKPLVRWLGVFLNSKFIFK
Ga0307518_1015867513300031838EctomycorrhizaMSKAKEAVISFDINKTELIYFYSKRTTIKEGLKLGDLEISPKPLVR
Ga0307518_1019184013300031838EctomycorrhizaVLELISKAKKAVISFNISKIEFIYFYKKYTTIKEGLKLGDIEISFKPLVR
Ga0307518_1027969013300031838EctomycorrhizaGIALELISKAKKAAISFDISKTELIYFYNKCTTIKEGLKLGDIEISPKPLVR
Ga0307518_1029828613300031838EctomycorrhizaMSKVKEAIISFNISKTKLIFFYSKRTTIKEGLKLEDLEISPKPLVRWLGVFLDSKLTFK
Ga0307518_1030792213300031838EctomycorrhizaKAIISFDISKTELIYFYSKYTTIKKGLKLGDIKISPKPLVRWLGIFLDFKLIFK
Ga0307507_1000135293300033179EctomycorrhizaMSRAKEAAISFNISKTELIHFYSKRTIIKEGLKLGDTEISPKPLVR
Ga0307507_1000352913300033179EctomycorrhizaMSKAKEAAISFDISKTELIHFYSKRITIEEGLKLGDIEIPSKLLVR
Ga0307507_1045352913300033179EctomycorrhizaMSKAKEAAISFDVSKTELIYFYSKRTTIEEGLKLGDVEISPKPLVRWLGIFL
Ga0307507_1062220713300033179EctomycorrhizaMSRAKEATISFDIIKTELIYFYSKRTTIEEGLKLGDVEISPKPLVR
Ga0307507_1065337413300033179EctomycorrhizaKLEGIAQKLISRAKEAAISFDISKIELIPFYSKRTTIEEGLKLGDIEISPNP


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.