Metagenome Family F100744

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F100744
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	83 residues
Representative Sequence	MAKPPEKKPEPAKPTDVRVLPMELRIGDRFTDATGEWEVITRPYVSAGGKLASAHVRKIGRPESTDLRTWNAHERIAVKRA
Number of Associated Samples	81
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	52.94 %
% of genes near scaffold ends (potentially truncated)	25.49 %
% of genes from short scaffolds (< 2000 bps)	94.12 %
Associated GOLD sequencing projects	67
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (84.314 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (39.216 % of family members)
Environment Ontology (ENVO)	Unclassified (56.863 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (75.490 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 38.27% Coil/Unstructured: 61.73%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF00072	Response_reg	5.88
PF12680	SnoaL_2	5.88
PF12836	HHH_3	2.94
PF13408	Zn_ribbon_recom	1.96
PF00702	Hydrolase	1.96
PF00313	CSD	0.98
PF12535	Nudix_N	0.98
PF04392	ABC_sub_bind	0.98
PF01068	DNA_ligase_A_M	0.98
PF05494	MlaC	0.98
PF14539	DUF4442	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.98
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.98
COG2854	Periplasmic subunit MlaC of the ABC-type intermembrane phospholipid transporter Mla	Cell wall/membrane/envelope biogenesis [M]	0.98
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.31 %
Unclassified	root	N/A	15.69 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	84.31 %
Unclassified	root	N/A	15.69 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.31 %
Unclassified	root	N/A	15.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.69 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	14.71 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.69 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	14.71 %
unclassified Terrabacteria group	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group	2.94 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.98 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.69 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	14.71 %
Terrabacteria group bacterium ANGP1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	2.94 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.98 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.69 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	14.71 %
Terrabacteria group bacterium ANGP1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	2.94 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.98 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.69 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	14.71 %
Terrabacteria group bacterium ANGP1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	2.94 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.98 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002562\|JGI25382J37095_10263463	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300002908\|JGI25382J43887_10193679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	985	Open in IMG/M
3300004268\|Ga0066398_10003729	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1762	Open in IMG/M
3300004633\|Ga0066395_10488751	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300005167\|Ga0066672_10085201	All Organisms → cellular organisms → Bacteria	1899	Open in IMG/M
3300005167\|Ga0066672_10799476	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300005171\|Ga0066677_10062970	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1887	Open in IMG/M
3300005171\|Ga0066677_10584554	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300005174\|Ga0066680_10030687	All Organisms → cellular organisms → Bacteria	3038	Open in IMG/M
3300005177\|Ga0066690_10658688	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300005181\|Ga0066678_10101909	All Organisms → cellular organisms → Bacteria	1740	Open in IMG/M
3300005186\|Ga0066676_10369383	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300005445\|Ga0070708_100272682	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1591	Open in IMG/M
3300005446\|Ga0066686_10134678	All Organisms → cellular organisms → Bacteria	1623	Open in IMG/M
3300005447\|Ga0066689_10868547	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300005454\|Ga0066687_10436594	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300005467\|Ga0070706_100033234	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	4760	Open in IMG/M
3300005468\|Ga0070707_101509379	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300005536\|Ga0070697_102008223	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300005554\|Ga0066661_10368790	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300005554\|Ga0066661_10438215	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300005555\|Ga0066692_10243926	All Organisms → cellular organisms → Bacteria	1133	Open in IMG/M
3300005558\|Ga0066698_10499365	Not Available	827	Open in IMG/M
3300005559\|Ga0066700_10271935	All Organisms → cellular organisms → Bacteria	1189	Open in IMG/M
3300005561\|Ga0066699_10207355	All Organisms → cellular organisms → Bacteria	1367	Open in IMG/M
3300005568\|Ga0066703_10130053	All Organisms → cellular organisms → Bacteria	1502	Open in IMG/M
3300005586\|Ga0066691_10212036	All Organisms → cellular organisms → Bacteria	1130	Open in IMG/M
3300005713\|Ga0066905_100088850	All Organisms → cellular organisms → Bacteria	2058	Open in IMG/M
3300005713\|Ga0066905_100153885	All Organisms → cellular organisms → Bacteria	1660	Open in IMG/M
3300005764\|Ga0066903_101537965	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1258	Open in IMG/M
3300005764\|Ga0066903_102209239	All Organisms → cellular organisms → Bacteria	1061	Open in IMG/M
3300006032\|Ga0066696_10221403	All Organisms → cellular organisms → Bacteria	1215	Open in IMG/M
3300006032\|Ga0066696_10431654	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300006034\|Ga0066656_10303277	All Organisms → cellular organisms → Bacteria	1031	Open in IMG/M
3300006800\|Ga0066660_10576625	All Organisms → cellular organisms → Bacteria	942	Open in IMG/M
3300006854\|Ga0075425_103108327	Not Available	506	Open in IMG/M
3300007255\|Ga0099791_10132845	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1157	Open in IMG/M
3300009012\|Ga0066710_103004344	Not Available	657	Open in IMG/M
3300009012\|Ga0066710_103712408	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300009137\|Ga0066709_100501453	All Organisms → cellular organisms → Bacteria	1710	Open in IMG/M
3300009137\|Ga0066709_101167727	All Organisms → cellular organisms → Bacteria	1133	Open in IMG/M
3300010043\|Ga0126380_10458027	All Organisms → cellular organisms → Bacteria	966	Open in IMG/M
3300010047\|Ga0126382_10602206	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	904	Open in IMG/M
3300010321\|Ga0134067_10170913	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	785	Open in IMG/M
3300010336\|Ga0134071_10113116	All Organisms → cellular organisms → Bacteria	1298	Open in IMG/M
3300010376\|Ga0126381_101797150	All Organisms → cellular organisms → Bacteria	885	Open in IMG/M
3300010376\|Ga0126381_103867991	Not Available	584	Open in IMG/M
3300012199\|Ga0137383_10376735	All Organisms → cellular organisms → Bacteria	1040	Open in IMG/M
3300012201\|Ga0137365_10736055	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300012203\|Ga0137399_10211325	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1579	Open in IMG/M
3300012205\|Ga0137362_10250239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	1531	Open in IMG/M
3300012208\|Ga0137376_11568639	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300012210\|Ga0137378_11086542	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300012211\|Ga0137377_10259791	All Organisms → cellular organisms → Bacteria	1667	Open in IMG/M
3300012211\|Ga0137377_10498848	All Organisms → cellular organisms → Bacteria	1155	Open in IMG/M
3300012211\|Ga0137377_11900008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	513	Open in IMG/M
3300012356\|Ga0137371_10466870	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300012361\|Ga0137360_11805856	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300012922\|Ga0137394_10131474	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2124	Open in IMG/M
3300012923\|Ga0137359_11626420	Not Available	534	Open in IMG/M
3300012930\|Ga0137407_11511748	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300012948\|Ga0126375_10743310	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300012976\|Ga0134076_10055396	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1504	Open in IMG/M
3300014150\|Ga0134081_10295096	Not Available	580	Open in IMG/M
3300014154\|Ga0134075_10176055	All Organisms → cellular organisms → Bacteria	918	Open in IMG/M
3300015358\|Ga0134089_10080034	All Organisms → cellular organisms → Bacteria	1230	Open in IMG/M
3300015358\|Ga0134089_10338406	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300016294\|Ga0182041_10185893	Not Available	1641	Open in IMG/M
3300016371\|Ga0182034_10653682	Not Available	891	Open in IMG/M
3300018433\|Ga0066667_11470761	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300018468\|Ga0066662_10629269	All Organisms → cellular organisms → Bacteria	1010	Open in IMG/M
3300018468\|Ga0066662_10990851	All Organisms → cellular organisms → Bacteria	832	Open in IMG/M
3300018468\|Ga0066662_11813586	Not Available	638	Open in IMG/M
3300025910\|Ga0207684_11037982	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	684	Open in IMG/M
3300026309\|Ga0209055_1007112	All Organisms → cellular organisms → Bacteria	6253	Open in IMG/M
3300026309\|Ga0209055_1078307	All Organisms → cellular organisms → Bacteria	1368	Open in IMG/M
3300026313\|Ga0209761_1152225	Not Available	1089	Open in IMG/M
3300026315\|Ga0209686_1181855	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300026328\|Ga0209802_1176711	All Organisms → cellular organisms → Bacteria	862	Open in IMG/M
3300026331\|Ga0209267_1051670	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1852	Open in IMG/M
3300026331\|Ga0209267_1111908	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1155	Open in IMG/M
3300026331\|Ga0209267_1309545	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300026332\|Ga0209803_1054101	All Organisms → cellular organisms → Bacteria	1762	Open in IMG/M
3300026333\|Ga0209158_1338464	Not Available	522	Open in IMG/M
3300026334\|Ga0209377_1146640	All Organisms → cellular organisms → Bacteria	900	Open in IMG/M
3300026334\|Ga0209377_1193856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	687	Open in IMG/M
3300026529\|Ga0209806_1014564	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4134	Open in IMG/M
3300026532\|Ga0209160_1075954	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1793	Open in IMG/M
3300026532\|Ga0209160_1090088	All Organisms → cellular organisms → Bacteria	1586	Open in IMG/M
3300026532\|Ga0209160_1100567	All Organisms → cellular organisms → Bacteria	1465	Open in IMG/M
3300026538\|Ga0209056_10457177	Not Available	714	Open in IMG/M
3300026540\|Ga0209376_1143299	All Organisms → cellular organisms → Bacteria	1155	Open in IMG/M
3300026550\|Ga0209474_10553005	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300026552\|Ga0209577_10581419	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300027646\|Ga0209466_1031685	All Organisms → cellular organisms → Bacteria	1083	Open in IMG/M
3300027655\|Ga0209388_1093024	Not Available	866	Open in IMG/M
3300027748\|Ga0209689_1155240	All Organisms → cellular organisms → Bacteria	1088	Open in IMG/M
3300027874\|Ga0209465_10100538	All Organisms → cellular organisms → Bacteria	1418	Open in IMG/M
3300027874\|Ga0209465_10472840	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300031543\|Ga0318516_10401745	Not Available	789	Open in IMG/M
3300031782\|Ga0318552_10182729	Not Available	1059	Open in IMG/M
3300032066\|Ga0318514_10195092	Not Available	1060	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.02%
Host-Associated	Host-Associated	0.98%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.02%
Plants	Host-Associated → Plants	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.02%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	82.35%
Loam	Environmental → Terrestrial → Soil → Loam	16.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	50.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.45%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.82%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.90%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	39.22%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.69%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	10.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.82%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	6.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.94%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.96%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25382J37095_102634632	3300002562	Grasslands Soil	MAKPRPEKKPELAAPGTTRILPIQLQLGDRVTDATGEWEVITRPYVSAGGKLASAHVRKIGRPETTDLRTWSAPERIAVKRGAAK*
JGI25382J43887_101936791	3300002908	Grasslands Soil	MDKPKPDKKPEPAKLTDVRVLPMELQIGDRFTDATGEWEVITRPYVSAGGKLASAHVRKXGRPEIADLRTWSAHEQIAVRRA
Ga0066398_100037293	3300004268	Tropical Forest Soil	MTRPKPEKKPETSQFAPLRVLPMELRIGDRLADETGEWEVISRPYASAGGKLASAHVRKVGRPEAADLRTWGAHERVSVKRSSAEEVQ*
Ga0066395_104887512	3300004633	Tropical Forest Soil	MPKPKPEKKPEMSQLAPLRVLPMELRIGDRLADQTGEWEVISRPYASAGGKLASAHVRKVGRPEAADLRTWGAHERVSVKRSRAEEGE*
Ga0066672_100852011	3300005167	Soil	MDKPKPDKKPEPAKLTDVRVLPMELQIGDRFTDATGEWEVITRPYVSAGGKLASAHVRKIGRPEIADLRTWSAHEQIAVRR
Ga0066672_107994762	3300005167	Soil	AKPRPEKKPEPAAPGTTRILPIQLQLGDRVTDATGEWEVITRPYVSAGGKLASAHVRKIGRPETTDLRTWSAHERIAVKRGAAK*
Ga0066677_100629701	3300005171	Soil	MAKPRPEKKPEPAAPGTTRILPIQLQLGDRVTDATGEWEVITRPYVSAGGKLASAHVRKIGRPETTDLRTWSAHERIAVKRGAAK*
Ga0066677_105845541	3300005171	Soil	MDKPKPDKKPEPAKLTDVRVLPMELQIGDRFTDATGEWEVITRPYVSAGGKLASAHVRKIGRPEIADLRTWSAHEQIAVRRT*
Ga0066680_100306871	3300005174	Soil	PEKKPEPAKPTDVRVLPMELRIADRFTDATGEWEVISRPYASAGGKLASAHVRKIGRPESTDLRTWNAHARIAVRRA*
Ga0066690_106586881	3300005177	Soil	MAKPPEKKPEPAKPTDVRVLPMELRIADRFTDATGEWEVISRPYASAGGKLASAHVRKIGRPESTDLRTWNAHERIAVRRA*
Ga0066678_101019093	3300005181	Soil	MDKPKPDKKPEPAKLTDVRVLPMELQIGDRFTDATGEWEVITRPYVSAGGKLASAHVRKIGRPEIADLRTWSAHEQIAVRRI*
Ga0066676_103693832	3300005186	Soil	MAKPRPEKSKPEPSPTRRLLPMELQVGDRLADETGEWEIISRPYTSAAGKLASVHVRKIDQPEVTNLRTWSAHERISVKRAAAEEGPR*
Ga0070708_1002726824	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MAKPRPEKKPELAAPGTTRILPIQLQLGDRVTDATGEWEVITRPYVSAGGKLASAHVRKIGRPETTDLRTWSAHERMAVKRGPKTR*
Ga0066686_101346783	3300005446	Soil	MAKPPEKKPEPAKPTDVRVLPMELRIADRFTDATGEWEVISRPYLSAGGKLASAHVRKIGRPESTDLRTWNAHERIAVKRA*
Ga0066689_108685471	3300005447	Soil	MAKPPEKKPEPAKPTDVRVLPMELRIADRFTDATGEWEVISRPFVSAGGKLASAHVRKIGRPESTDLRTWNAHERIAVRRA*
Ga0066687_104365941	3300005454	Soil	MAKPRPEKKPEPAAPGTTRILPIQRQLGDRVTDATGEWEVITRPYVSAGGKLASAHVRKIGRPESTDLRTWNAHERIAVRRA*
Ga0070706_1000332341	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MAKPRPEKKPEPAAPGTIRILPIQLQLGDRVTDATGEWEVITRPYVSGSGKLASADVRKIGRPETTDLRTWSAHERIAVKRGAAK*
Ga0070707_1015093792	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MAKPRPEKKPEPAAPGTTRILPIQLQLGDRVTDATGEWEVITRPYVSAGGKLASAHVRKIGRPETTDLRTWSAHERIAVKRGPKTR*
Ga0070697_1020082231	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MAKPPEKKPEPAKPTDVRVLPMEIRVGDRFTDATGEWEVISRPYASAGGKLASAHVRKIGRPESTDLRTWNAHGRIVVRRA*
Ga0066661_103687902	3300005554	Soil	MAKPPEKKAEPAKPTDVRVLPMELRIADRFTDATGEWEVISRPYASAGGKLASAHVRKIGRPESTDLRTWNAHERIAVRR
Ga0066661_104382152	3300005554	Soil	MAKPPEKKPEPAKPTDVRVLPMELRIADRFTDATGEWEVITRPYVSAGGKLASAHVRKIGRPESTDLRTWNAHERIVVRRA*
Ga0066692_102439263	3300005555	Soil	PEKKPEPAKPTDVRVLPMELRIADRFTDATGEWEVISRPYASAGGKLASAHVRKIGRPESTDLRTWNAHERIAVRRA*
Ga0066698_104993651	3300005558	Soil	MAKPPAKKPEPAKLTDVRVLPMELRIGEDSLTHVSAGGKLASAHARKTGRPEIADLRTWSAHEQIAVGEHDPAFRGQDTPSAP*
Ga0066700_102719352	3300005559	Soil	MSMAKPPEKKPEPAKPTDIRVLPMELRIADRFTDATGEWEVISRPFVSAGGKLASAHVRKIGRPESTDLRTWNAHERIAVRRA*
Ga0066699_102073554	3300005561	Soil	MAKPRPEKKPEPAAPGTTRILPIQLQLGDRVTDATGEWEVITRPYVSAGGKLASAHVRKIGRPETTDLRTWSAHERIAVKRG
Ga0066703_101300533	3300005568	Soil	MAKPPEKKPEPAKPTDVRVLPMELRIADRFTDATGEWEVITRPYVSAGGKLASAHVRKIGRPESTDLRTWNAHERIAVRRA*
Ga0066691_102120363	3300005586	Soil	MAKPPEKKPEPAKPTDVRVLPMELQIGDRFTDATGEWEVITRPYVSAGGKLASAHVRKIGRPEIADLRTWSAHEQIAVRRI*
Ga0066905_1000888504	3300005713	Tropical Forest Soil	MTKPKPEKKPEPSQLAPLRVLPMELRIGDRLADQTGEWEVISRPYASAGGKLASAHVRKVGRPEAIDLRTWGAHERTSVKRATSAEEGKR*
Ga0066905_1001538854	3300005713	Tropical Forest Soil	RTRTAMTRPKPEKKPETSQFAPLRVLPMELRIGDRLADETGEWEVISRPYASAGGKLASAHVRKVGRPEAADLRTWGAHERVSVKRSSAEEVQ*
Ga0066903_1015379654	3300005764	Tropical Forest Soil	APLRVLPMELRIGDRLADQTGEWEVISRPYASAGGKLASAHVRQVGRPEAADLRTWGAHERISVKRATSAEEGKR*
Ga0066903_1022092392	3300005764	Tropical Forest Soil	MPKPKPEKKPEMSQFAPLRVLPMELRIGDRLADQTGEWEVISRPYASAGGKLASAHVRKVGRPEATDLRTWGAHERISVKRATSAEEGKR*
Ga0066696_102214033	3300006032	Soil	EKKPEPAKPTDVRVLPMELRIADRFTDATGEWEVISRPYASAGGKLASAHVRKIGRPESTDLRTWNAHERIAVRRA*
Ga0066696_104316542	3300006032	Soil	VTIMAKPRPEKKPEPAAPGTTRILPIQLQLGDRVTDATGEWEVITRPYVSAGGKLASAHVRKIGRPETTDLRTWSAHERIAVKRGAAK*
Ga0066656_103032772	3300006034	Soil	MAKPPEKKPEPAKPTDVRVLPMELRIADRFTDATGEWEVISRPYLSAGGKLASAHVRKIGRPESTDLRTWNAHERIAVRRA*
Ga0066660_105766251	3300006800	Soil	MAKPEPAKPTDVRVLPMELRIADRFTDATGEWEVISRPFVSAGGKLASAHVRKIGRPESTDLRTWNAHERIAVRRA*
Ga0075425_1031083271	3300006854	Populus Rhizosphere	MAKPRPEKKPEPAAPGTTRILPIQLQLGDRVTDATGEWEVITRPYVSGGGKLASAHVRKIGRPETTDLRTWSAHERIAVKRGAAK*
Ga0099791_101328452	3300007255	Vadose Zone Soil	MAKPKPEKKPEPPPLVIHQLRPMELQIGDRLTDETGEWEVISRPYASAEGKIASAHMRKVGKPEVTDLRTWGADERISVKRATKRDKP*
Ga0066710_1030043441	3300009012	Grasslands Soil	EKKPEPAKPTDVRVLPMELRIADRFTDATGEWEVISRPYASAGGKLASAHVRKIGRPESTDLRTWNAHERIAVRRA
Ga0066710_1037124081	3300009012	Grasslands Soil	MAKPPEKKPEPAKPTDVRVLPMELRIGDRFTDATGEWEVITRPYVSAGGKLASAHVRKIGRPESTDLRTWNAHERIAVKRA
Ga0066709_1005014532	3300009137	Grasslands Soil	MSMAKPPEKKPEPAKPTDVRVLPMELRIADRFTDATGEWEVISRPFVSAGGKLASAHVRKIGRPESIDLRTWNAHERIAVRRA*
Ga0066709_1011677273	3300009137	Grasslands Soil	MAKPPEKKPEPAKPPDVRVLPMELRIADRFTDATGEWEVISRPYASAGGKLASAHVRKIGRPESTDLRTWNAHERIAIRRA*
Ga0126380_104580272	3300010043	Tropical Forest Soil	MTKPKPEKKPETSQLAPLRVLPMELRIGDRLADQTGEWEVISRPYASAGGKLASAHVRKVGRPEAIDLRTWGAHERTSVKRATSAEEGKR*
Ga0126382_106022063	3300010047	Tropical Forest Soil	ERTRTAMTRPKPEKKPETSQFAPLRVLPMELRIGDRLADETGEWEVISRPYASAGGKLASAHVRKVGRPEAADLRTWGAHERVSVKRSSAEEVQ*
Ga0134067_101709132	3300010321	Grasslands Soil	MAKPRPEKKPEPAAPGTTRILPIQLQLGDRVMDATGEWEVITRPYVSAGGKLASAHVRKIGRPETTDLRTWSAHERIAVKRGAAK*
Ga0134071_101131162	3300010336	Grasslands Soil	MAKPRPEKKPEPAAPGTTRILPIQLQLGDRVTDATGEWEVITRPYVSAGGKLASAHVRKIGRPETTALRTWSAHERIAVKRGAAK*
Ga0126381_1017971502	3300010376	Tropical Forest Soil	MTRPKPEKKPETSQFAPLRVLPMELRIGDRLADQTGEWEVISRPYASAGGKLASAHVRKVGRPEAADLRTWGPHERVSVKRSSAEEVQ*
Ga0126381_1038679912	3300010376	Tropical Forest Soil	MPKPKPEKKPEMSQLAPLRVLPMELRIGDRLADQTGEWEVISRPYASAGGKLASAHVRQVGRPEAADLRTWGAHERISVKRATSAEEGKR*
Ga0137383_103767352	3300012199	Vadose Zone Soil	MAKPPEKKPEPAKPTDVRVLPMELRIADRFTDATGEWEVIGRPYLSAGGKLASAHVRKIGRPESTDLRTWNAHERIAVKRA*
Ga0137365_107360552	3300012201	Vadose Zone Soil	VTITAKPRPEKKPEPAAPGTTRILPIQLQLGDRVTDVTGEWEVITRPYVSAGGKLASAHVRKIGRPETTDLRTWSAHERIAVKRGAAK*
Ga0137399_102113253	3300012203	Vadose Zone Soil	MAKPKPEKKPEPPPLVIHQLRPMELQIGDRLTDETGEWEVISRPYASAEGKIASAHMRKVGKPEVTDLRTWGADERISVKRAIGRDKH*
Ga0137362_102502391	3300012205	Vadose Zone Soil	PRPEKKPEPAAPGTTRILPIQLQLGDRVTDATGEWEVITRPYVSAGGKLASAHVRKIGRPETTDLRTWSAHERIAVKRGAAK*
Ga0137376_115686392	3300012208	Vadose Zone Soil	MAKPRPEKKPEPAAPGTTRILPIQLRLGDRVTDATGEWEVITRPYVSAGGKLASAHVRKIGRPETTDLRTWSAHERIAVKRGAAK*
Ga0137378_110865422	3300012210	Vadose Zone Soil	MAKPRPENKPEPAAPGTTRILPIQLQLGDRVTDATGEWEVITRPYVSAGGKLASAHVRKIGRPETTDLRTWSAHERIAVKRGAAK*
Ga0137377_102597912	3300012211	Vadose Zone Soil	VTITAKPRPEKKPEPAAPGTTRILPIQLRLGDRVTDATGEWEVITRPYVSAGGKLASAHVRKIGRPETTDLRTWSAHERIAVKRGA
Ga0137377_104988482	3300012211	Vadose Zone Soil	MDKPKPDKKPEPAKLTDVRVLPMELQIGDRFTDATGEWEVITRPYVSAGGKLASAHVRKTGRPEIADLRTWSAHEQIAVRRA*
Ga0137377_119000081	3300012211	Vadose Zone Soil	MAKPPEKKPEPAKPTDVRVLPMELRIGDRLDGETGEEWEVISRPYASAGGKLASAHVRRVGRSEVTDLRTWSAHERVTVKRATPEEGKR*
Ga0137371_104668702	3300012356	Vadose Zone Soil	MAKRRPEKKPELAAPGTTRILLIQLQLGDRITDATGEWEVITRPYVSAGGKLASAHVRKIGRSETTDLRTWSAHERIAVKRGAAK*
Ga0137360_118058561	3300012361	Vadose Zone Soil	MDKPKPDKKPEPAKLTDVRVLPMELQIGDRFTDATGEWEVITRPYVSAGGKLASAHVRKIGRPETTDLRTWSAHERIAVKRGAAK*
Ga0137394_101314743	3300012922	Vadose Zone Soil	MAKPKPEKKPEPPPLVIYQLLPMELQIGDRLTDETGEWEVISRPYASAEGKIASVHMRKVGKPEVTDLRTWGADERISVKRATKRDKQ*
Ga0137359_116264201	3300012923	Vadose Zone Soil	MAKPKPEKKPEPPPLVIHQLRPMELQIGDRLTDETGEWEVISRPYASAEGKIASAHMRKVGKPEVTDLWTWGADERISVKRATKRDKQ*
Ga0137407_115117481	3300012930	Vadose Zone Soil	MAKPPEKKPEPAKPTDVRVLPMELRIADRFTDATGEWEVIGRPYLSAGGKLASAHVRKIGRPESTDLRTWNAHERIAVRRA*
Ga0126375_107433102	3300012948	Tropical Forest Soil	MTKPKPEKKPEPSQLAPLRVLPMELRIGDRLADQTGEWEVISRPYASAGGKLASAHVRKVGRPEATDLRTWGAHERISVKRATSAEEGKR*
Ga0134076_100553963	3300012976	Grasslands Soil	MAKPRPEKKPELAAPGTTRILPIQLQLGDRVTDATGEWEVITRPYVSAGGKLASAHVRKIGRPETTDLRTWSAHERIAVKRGAAK*
Ga0134081_102950962	3300014150	Grasslands Soil	MAKPRPEKEARACCARTTRILPIQLQLGDRVTDATGEWEVITRPYVSAGGKLASAHVGKIGRPEATDLRTWSAHERIAVKRGAAK*
Ga0134075_101760552	3300014154	Grasslands Soil	MAKPPEKKPEPAKPTDVRVLPMELRIADRFTDATGEWEVIGRPYLSAGGKLASAHVRKIGRPESTDLRTWNAHARIAVRRA*
Ga0134089_100800341	3300015358	Grasslands Soil	MAKPRPEKKPEPAAPGTTRILPIQLQLGDRVTDATGEWEVITRPYVSAGGKLASAHVRKIGRPEATDLRTWSAHERIAVKRGAAK*
Ga0134089_103384061	3300015358	Grasslands Soil	MAKPPEKKPEPAKPTDVRVLPMELQIADRFTDATGEWEVISRPYASAGGKLASAHVRKIGRPESTDLRTWNAHERIAVRRA*
Ga0182041_101858933	3300016294	Soil	MAKPPSEKKPDPAKPVEIRVLPMELRIGDRLTDSDGEREVISRRYATTSGKLVSARVRKIGRPETADLRTWSAHERVAVRRASAE
Ga0182034_106536821	3300016371	Soil	MAKPPSEKKPDPAKPVEIRVLPMELRIGDRLTDSDGEWEVISRRYATTSGKLVSARVRKIGRPETADLRTWSAHERVAVRRAS
Ga0066667_114707611	3300018433	Grasslands Soil	MAKPRTEKKPEPAAPGTTRILPIQLQLGDRVTDATGEWEVITRPYVSAGGKLASAHVRKIGRPETTDLRTWSAHERIAVKRGAAK
Ga0066662_106292692	3300018468	Grasslands Soil	MAKPPEKKPEPAKPTDVRVLPMELRIADRFTDATGEWEVISRPYASAGGKLASAHVRKIGRPESTDLRTWNAHERIAVRRA
Ga0066662_109908512	3300018468	Grasslands Soil	MDKPKPDKKPEPAKLTDVRVLPMELQIGDRFTDATGEWEVITRPYVSAGGKLASAHVRKIGRPEIADLRTWSAHEQIAVRRT
Ga0066662_118135862	3300018468	Grasslands Soil	MAKPRPEKKPELAAPGTTRILPIQLQLGDRVTDATGEWEVITRPYVSAGGKLASAHVRKIGRPEATDLRTWSAHERIAVKRGAAK
Ga0207684_110379822	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MAKPRPEKKPEPAAPGTIRILPIQLQLGDRVTDATGEWEVITRPYVSGSGKLASADVRKIGRPETTDLRTWSAHERIAVKRGAAK
Ga0209055_100711211	3300026309	Soil	MDKPKPDKKPEPAKLTDVRVLPMELQIGDRFTDATGEWEVITRPYVSAGGKLASAHVRKIGRPEIADLRTWSAHEQIAVRRI
Ga0209055_10783073	3300026309	Soil	RARRGTRCGRTSMAKPPEKKPEPAKPTDVRVLPMELRIADRFTDATGEWEVISRPYLSAGGKLASAHVRKIGRPESTDLRTWNAHERIAVKRA
Ga0209761_11522252	3300026313	Grasslands Soil	MDKPKPDKKPAAAASATRRILPMDLQLGDRIVDETGEYEVVGRPYVSAGGKLASAHVRKTGRPEIADLRTWSAHEQIAVRRA
Ga0209686_11818552	3300026315	Soil	MAKPRPEKKPEPAAPGTSRILPIQLQLGDRVTDATGEWEVITRPYVSAGGKLASAHVRKIGRPETTDLRTWSAHERIAVKRGAAK
Ga0209802_11767111	3300026328	Soil	MAKPRPEKKPEPAAPGTTRILPIQLQLGDRVTDATGEWEVITRPYVSAGGKLASAHVRKIGRPETTDLRTWSAHERIAVKRGAAK
Ga0209267_10516701	3300026331	Soil	MAKPRPEKKPEPAAPGTTRILPIQLQLGDRVTDATGEWEVITRPYVSAGGKLASAHVRKIGRPEATDLRTWSAHERIAVKRGAAK
Ga0209267_11119081	3300026331	Soil	MAKPRPEKKPEPAAPGTSRILPIQLQLGDRVMDATGEWEVITRPYVSAGGKLASAHVRKIGRPETTDLRTWSA
Ga0209267_13095452	3300026331	Soil	RTSMAKPPEKKPEPAKPTDVRVLPMELRIADRFTDATGEWEVISRPFVSAGGKLASAHVRKIGRPESTDLRTWNAHERIAVRRA
Ga0209803_10541012	3300026332	Soil	MAKPSEKKPEPAKPTDVRVLPMELRIADRFTDATGEWEVISRPYASAGGKLASAHVRKIGRPESTDLRTWNAHARIAVRRA
Ga0209158_13384641	3300026333	Soil	TDVRVLPMELQIGDRFTDATGEWEVITRPYVSAGGKLASAHVRKIGRPEIADLRTWSAHEQIAVRRI
Ga0209377_11466402	3300026334	Soil	MAKPSEKKPEPAKPTDVRVLPMELRIADRFTDATGEWEVISRPYASAGGKLASAHVRKIGRPESTDLRTWNAHERIAVRRA
Ga0209377_11938561	3300026334	Soil	KPEPAAPGTTRILPIQRQLGDRVTDATGEWEVITRPYVSAGGKLASAHVRKIGRPETTALRTWSAHERIAVKRGAA
Ga0209806_10145647	3300026529	Soil	MDKPKPDKKPEPAKLTDVRVLPMELQIGDRFTDATGEWEVITRPYVSAGGKLASAHVRKIGRPEIADLRTWSAHEQIA
Ga0209160_10759544	3300026532	Soil	MAKLPEKKPEPAKPTDVRVLPMELRIADRFTDATGEWEVISRPYASAGGKLASAHVRKIGRPESSTDLRTWNAHARIAVRRA
Ga0209160_10900882	3300026532	Soil	MAKPRPEKKPEPAAPGTTRILPIQRQLGDRVTDATGEWEVITRPYVSAGGKLASAHVRKIGRPETTALRTWSAHERIAVKRGAA
Ga0209160_11005673	3300026532	Soil	MAKPPEKKPEPAKPTDVRVLPMELRIADRFTDATGEWEVISRPYLSAGGKLASAHVRKIGRPESTDLRTWNAHERIVVRRA
Ga0209056_104571772	3300026538	Soil	MAKLPEKKPEPAKPTDVRVLPMELRIADRFTDATGEWEVISRPYASAGGKLASAHVRKIGRPESTDLRTWNAHARIAVRRA
Ga0209376_11432992	3300026540	Soil	MAKPRPEKKPEPAAPGTTRILPIQLQLGDRVTDATGEWEVITRPYVSAGGKLASAHVRKIGRPEIADLRTWSAHEQIA
Ga0209474_105530052	3300026550	Soil	MAKPPEKKPEPAKPTDVRVLPMELRIADRFTDATGEWEVITRPYVSAGGKLASAHVRKIGRPESTDLRTWNAHERIVVRRA
Ga0209577_105814192	3300026552	Soil	MAKPPEKKPEPAKPTDIRVLPMELRIADRFTDATGEWEVISRPFVSAGGKLASAHVRKIGRPESTDLRTWNAHERIAVRRA
Ga0209466_10316851	3300027646	Tropical Forest Soil	MTKPKPEKKPEPSQLAPLRVLPMELRIGDRLADQTGEWEVISRPYASAGGKLASAHVRKVGRPEAIDL
Ga0209388_10930242	3300027655	Vadose Zone Soil	MAKPKPEKKPEPPPLVIHQLRPMELQIGDRLTDETGEWEVISRPYASAEGKIASAHMRKVGKPEVTDLRTWGADERISVKRATKRDKP
Ga0209689_11552402	3300027748	Soil	MAKPPEKKPEPAKPTDVRVLPMELRIADRFTDATGEWEVITRPYVSAGGKLASAHVRKIGRPESTDLRTWNAHERIAVKRA
Ga0209465_101005383	3300027874	Tropical Forest Soil	MPKPKPEKKPEMSQLAPLRVLPMELRIGDRLADQTGEWEVISRPYASAGGKLASAHVRKVGRPEAADLRTWGAHERVSVKRSRAEEGE
Ga0209465_104728402	3300027874	Tropical Forest Soil	MTRPKPEKKPETSQFAPLRVLPMELRIGDRLADETGEWEVISRPYASAGGKLASAHVRKVGRPEAADLRTWGAHERVSVKRSSAEEVQ
Ga0318516_104017452	3300031543	Soil	MAKPPSEKKPDPAKPVEIRVLPMELRIGDRLTDSDGEWEVISRRYATTSGKLVSARVRKIGRPETADLRTWSAHERVAVRRASAE
Ga0318552_101827292	3300031782	Soil	MAKPPSEKKPDPAKPVEIRVLPMELRIGDRLTDSDGEWEVISRRYATTSGKLVSARVRKIGRPETADLRTW
Ga0318514_101950921	3300032066	Soil	AKPVEIRVLPMELRIGDRLTDSDGEWEVISRRYATTSGKLVSARVRKIGRPETADLRTWSAHERVAVRRASAE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F100744

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences