Metagenome Family F100710

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F100710
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	92 residues
Representative Sequence	LTIELTRDEAEELLKILKLMYTNHALTKAISDRLAGEPLIEFPKEPEPEEPVDSGWKDLSTAEIKAIWNLTKKPSEFATMLLAKVKEKNYV
Number of Associated Samples	53
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	78.43 %
% of genes near scaffold ends (potentially truncated)	27.45 %
% of genes from short scaffolds (< 2000 bps)	65.69 %
Associated GOLD sequencing projects	46
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Predicted Viral (34.314 % of family members)
NCBI Taxonomy ID	10239 (predicted)
Taxonomy	All Organisms → Viruses → Predicted Viral

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater (24.510 % of family members)
Environment Ontology (ENVO)	Unclassified (49.020 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (46.078 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.14% β-sheet: 0.00% Coil/Unstructured: 42.86%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF03796	DnaB_C	24.51
PF11753	DUF3310	19.61
PF13481	AAA_25	3.92
PF07120	DUF1376	3.92
PF13392	HNH_3	1.96
PF01242	PTPS	1.96
PF04404	ERF	1.96
PF07102	YbcO	1.96
PF00535	Glycos_transf_2	0.98
PF01507	PAPS_reduct	0.98
PF03592	Terminase_2	0.98
PF03819	MazG	0.98
PF13489	Methyltransf_23	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0305	Replicative DNA helicase	Replication, recombination and repair [L]	24.51
COG1066	DNA repair protein RadA/Sms, contains AAA+ ATPase domain	Replication, recombination and repair [L]	24.51
COG3756	Uncharacterized conserved protein YdaU, DUF1376 family	Function unknown [S]	3.92
COG0720	6-pyruvoyl-tetrahydropterin synthase	Coenzyme transport and metabolism [H]	1.96
COG3728	Phage terminase, small subunit	Mobilome: prophages, transposons [X]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	75.49 %
Unclassified	root	N/A	24.51 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	58.82 %
Unclassified	root	N/A	24.51 %
cellular organisms	root	All Organisms → cellular organisms	16.67 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	34.31 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	24.51 %
Unclassified	root	N/A	24.51 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	16.67 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	34.31 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	24.51 %
Unclassified	root	N/A	24.51 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	11.76 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.98 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	34.31 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	24.51 %
Unclassified	root	N/A	24.51 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5.88 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.98 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	34.31 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	24.51 %
Unclassified	root	N/A	24.51 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.94 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.98 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	34.31 %
Unclassified	root	N/A	24.51 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	23.53 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	1.96 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.98 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	34.31 %
Unclassified	root	N/A	24.51 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	23.53 %
Bordetella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Bordetella	1.96 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.98 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	34.31 %
Unclassified	root	N/A	24.51 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	23.53 %
Bordetella bronchiseptica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Bordetella → Bordetella bronchiseptica	1.96 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.98 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002278\|B570J29590_101046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2458	Open in IMG/M
3300002835\|B570J40625_100007898	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	19562	Open in IMG/M
3300005525\|Ga0068877_10225547	All Organisms → Viruses → Predicted Viral	1111	Open in IMG/M
3300005527\|Ga0068876_10007241	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7493	Open in IMG/M
3300005527\|Ga0068876_10068207	Not Available	2147	Open in IMG/M
3300005527\|Ga0068876_10122789	All Organisms → cellular organisms → Bacteria	1539	Open in IMG/M
3300005527\|Ga0068876_10149100	All Organisms → Viruses → Predicted Viral	1375	Open in IMG/M
3300005527\|Ga0068876_10236704	All Organisms → Viruses → Predicted Viral	1050	Open in IMG/M
3300005527\|Ga0068876_10619702	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300005528\|Ga0068872_10288056	Not Available	913	Open in IMG/M
3300005581\|Ga0049081_10009207	All Organisms → Viruses → Predicted Viral	3746	Open in IMG/M
3300005582\|Ga0049080_10021536	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2248	Open in IMG/M
3300006802\|Ga0070749_10192349	All Organisms → Viruses → Predicted Viral	1171	Open in IMG/M
3300006802\|Ga0070749_10481195	Not Available	678	Open in IMG/M
3300007363\|Ga0075458_10139903	Not Available	750	Open in IMG/M
3300008113\|Ga0114346_1029849	All Organisms → cellular organisms → Bacteria → Proteobacteria	2863	Open in IMG/M
3300008113\|Ga0114346_1087247	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1458	Open in IMG/M
3300008113\|Ga0114346_1270633	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	612	Open in IMG/M
3300008116\|Ga0114350_1169069	Not Available	580	Open in IMG/M
3300008120\|Ga0114355_1015192	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4195	Open in IMG/M
3300008120\|Ga0114355_1133146	Not Available	913	Open in IMG/M
3300008266\|Ga0114363_1048719	All Organisms → Viruses → Predicted Viral	1695	Open in IMG/M
3300008266\|Ga0114363_1060701	All Organisms → Viruses → Predicted Viral	1470	Open in IMG/M
3300008266\|Ga0114363_1081774	All Organisms → Viruses → Predicted Viral	1203	Open in IMG/M
3300008266\|Ga0114363_1096643	All Organisms → Viruses → Predicted Viral	1070	Open in IMG/M
3300008266\|Ga0114363_1123076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	898	Open in IMG/M
3300008266\|Ga0114363_1142160	Not Available	806	Open in IMG/M
3300008266\|Ga0114363_1144081	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	798	Open in IMG/M
3300008266\|Ga0114363_1146385	Not Available	788	Open in IMG/M
3300008266\|Ga0114363_1189293	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	644	Open in IMG/M
3300008339\|Ga0114878_1091374	All Organisms → Viruses → Predicted Viral	1193	Open in IMG/M
3300008450\|Ga0114880_1049017	All Organisms → Viruses → Predicted Viral	1794	Open in IMG/M
3300008450\|Ga0114880_1070985	All Organisms → Viruses → Predicted Viral	1415	Open in IMG/M
3300009081\|Ga0105098_10186715	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	951	Open in IMG/M
3300009081\|Ga0105098_10689031	Not Available	541	Open in IMG/M
3300009085\|Ga0105103_10659446	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	599	Open in IMG/M
3300009165\|Ga0105102_10031892	All Organisms → Viruses → Predicted Viral	2217	Open in IMG/M
3300009165\|Ga0105102_10933892	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Bordetella → Bordetella bronchiseptica	502	Open in IMG/M
3300010354\|Ga0129333_10023349	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5871	Open in IMG/M
3300010354\|Ga0129333_10053918	All Organisms → cellular organisms → Bacteria → Proteobacteria	3761	Open in IMG/M
3300010354\|Ga0129333_10067908	All Organisms → Viruses → Predicted Viral	3314	Open in IMG/M
3300010354\|Ga0129333_10137684	All Organisms → cellular organisms → Bacteria	2243	Open in IMG/M
3300010354\|Ga0129333_10183472	All Organisms → Viruses → Predicted Viral	1908	Open in IMG/M
3300010354\|Ga0129333_10345965	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1323	Open in IMG/M
3300010354\|Ga0129333_10386321	All Organisms → Viruses → Predicted Viral	1241	Open in IMG/M
3300010370\|Ga0129336_10086007	All Organisms → Viruses → Predicted Viral	1852	Open in IMG/M
3300013004\|Ga0164293_10068356	All Organisms → cellular organisms → Bacteria → Proteobacteria	2804	Open in IMG/M
3300013372\|Ga0177922_10472183	Not Available	920	Open in IMG/M
3300017747\|Ga0181352_1156149	Not Available	602	Open in IMG/M
3300017754\|Ga0181344_1152592	Not Available	659	Open in IMG/M
3300020506\|Ga0208091_1003464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2251	Open in IMG/M
3300020533\|Ga0208364_1000520	Not Available	8775	Open in IMG/M
3300020536\|Ga0207939_1027751	Not Available	755	Open in IMG/M
3300022179\|Ga0181353_1020357	All Organisms → Viruses → Predicted Viral	1743	Open in IMG/M
3300022179\|Ga0181353_1128467	Not Available	600	Open in IMG/M
3300022752\|Ga0214917_10080913	All Organisms → Viruses → Predicted Viral	1986	Open in IMG/M
3300025889\|Ga0208644_1172234	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	969	Open in IMG/M
3300027608\|Ga0208974_1088294	Not Available	840	Open in IMG/M
3300027659\|Ga0208975_1022074	All Organisms → Viruses → Predicted Viral	2081	Open in IMG/M
3300027693\|Ga0209704_1218709	Not Available	556	Open in IMG/M
3300027793\|Ga0209972_10150075	All Organisms → Viruses → Predicted Viral	1118	Open in IMG/M
3300027793\|Ga0209972_10237598	Not Available	828	Open in IMG/M
3300027806\|Ga0209985_10126856	All Organisms → Viruses → Predicted Viral	1282	Open in IMG/M
3300027816\|Ga0209990_10014714	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4625	Open in IMG/M
3300027816\|Ga0209990_10472532	Not Available	534	Open in IMG/M
3300031758\|Ga0315907_10159743	All Organisms → Viruses → Predicted Viral	1905	Open in IMG/M
3300031758\|Ga0315907_10827042	Not Available	688	Open in IMG/M
3300031787\|Ga0315900_10094025	All Organisms → Viruses → Predicted Viral	2943	Open in IMG/M
3300031787\|Ga0315900_10317564	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1279	Open in IMG/M
3300031857\|Ga0315909_10051631	All Organisms → cellular organisms → Bacteria → Proteobacteria	3802	Open in IMG/M
3300031857\|Ga0315909_10052344	All Organisms → Viruses → Predicted Viral	3768	Open in IMG/M
3300031857\|Ga0315909_10133250	All Organisms → Viruses → Predicted Viral	2077	Open in IMG/M
3300031857\|Ga0315909_10158299	All Organisms → Viruses → Predicted Viral	1852	Open in IMG/M
3300031857\|Ga0315909_10204232	All Organisms → Viruses → Predicted Viral	1562	Open in IMG/M
3300031857\|Ga0315909_10512957	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	824	Open in IMG/M
3300031951\|Ga0315904_10182554	All Organisms → Viruses → Predicted Viral	2081	Open in IMG/M
3300031951\|Ga0315904_10188985	All Organisms → cellular organisms → Bacteria	2035	Open in IMG/M
3300031951\|Ga0315904_10213601	All Organisms → cellular organisms → Bacteria → Proteobacteria	1881	Open in IMG/M
3300031951\|Ga0315904_10245606	All Organisms → Viruses → Predicted Viral	1718	Open in IMG/M
3300031951\|Ga0315904_11016897	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	655	Open in IMG/M
3300031951\|Ga0315904_11051049	Not Available	640	Open in IMG/M
3300031951\|Ga0315904_11404928	Not Available	520	Open in IMG/M
3300031951\|Ga0315904_11451191	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Bordetella → Bordetella bronchiseptica	508	Open in IMG/M
3300032050\|Ga0315906_10047473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4501	Open in IMG/M
3300032050\|Ga0315906_10077868	All Organisms → Viruses → Predicted Viral	3352	Open in IMG/M
3300032050\|Ga0315906_10213379	All Organisms → Viruses → Predicted Viral	1805	Open in IMG/M
3300032050\|Ga0315906_11083859	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	593	Open in IMG/M
3300032093\|Ga0315902_10644283	Not Available	878	Open in IMG/M
3300032116\|Ga0315903_10057136	All Organisms → Viruses → Predicted Viral	3933	Open in IMG/M
3300032116\|Ga0315903_10133647	All Organisms → Viruses → Predicted Viral	2305	Open in IMG/M
3300033981\|Ga0334982_0001901	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	13055	Open in IMG/M
3300033993\|Ga0334994_0087362	All Organisms → cellular organisms → Bacteria → Proteobacteria	1857	Open in IMG/M
3300033994\|Ga0334996_0000554	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	23823	Open in IMG/M
3300034061\|Ga0334987_0092575	All Organisms → Viruses → Predicted Viral	2350	Open in IMG/M
3300034062\|Ga0334995_0063419	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2945	Open in IMG/M
3300034073\|Ga0310130_0000665	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	23946	Open in IMG/M
3300034101\|Ga0335027_0870990	Not Available	514	Open in IMG/M
3300034104\|Ga0335031_0416491	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	840	Open in IMG/M
3300034104\|Ga0335031_0475443	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	766	Open in IMG/M
3300034106\|Ga0335036_0000473	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	36351	Open in IMG/M
3300034106\|Ga0335036_0182257	Not Available	1470	Open in IMG/M
3300034166\|Ga0335016_0009236	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	8693	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.02%
Terrestrial	Environmental → Terrestrial	0.98%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	87.25%
Marine	Environmental → Aquatic → Marine	11.76%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.98%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	31.37%
Lentic	Environmental → Aquatic → Freshwater → Lentic	25.49%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	24.51%
Coastal	Environmental → Aquatic → Marine → Coastal	11.76%
Sediment	Environmental → Aquatic → Freshwater → Sediment	5.88%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	31.37%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	24.51%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	21.57%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	11.76%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	5.88%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	3.92%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	24.51%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	16.67%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	14.71%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	12.75%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	7.84%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	5.88%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	3.92%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	3.92%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	3.92%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	2.94%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	0.98%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.98%
Fracking Water	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Fracking Water	0.98%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002278	Freshwater microbial communities from Lake Mendota, WI - 22OCT2012 deep hole epilimnion	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300005525	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel6S_1000h metaG	Environmental	Open in IMG/M
3300005527	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG	Environmental	Open in IMG/M
3300005528	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaG	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300007363	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_<0.8_DNA	Environmental	Open in IMG/M
3300008113	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NA	Environmental	Open in IMG/M
3300008116	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-3-NA	Environmental	Open in IMG/M
3300008120	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-3-NA	Environmental	Open in IMG/M
3300008266	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NA	Environmental	Open in IMG/M
3300008339	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - Sept 29, 2014 all contigs	Environmental	Open in IMG/M
3300008450	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - Oct 27, 2014 all contigs	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009085	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009165	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300010370	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNA	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental	Open in IMG/M
3300017747	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.S.N	Environmental	Open in IMG/M
3300017754	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.D.D	Environmental	Open in IMG/M
3300020506	Freshwater microbial communities from Lake Mendota, WI - 26OCT2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020533	Freshwater microbial communities from Lake Mendota, WI - 08JUN2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020536	Freshwater microbial communities from Lake Mendota, WI - 02JUN2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300022179	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.N	Environmental	Open in IMG/M
3300022752	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL_1208_BB	Environmental	Open in IMG/M
3300025889	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)	Environmental	Open in IMG/M
3300027608	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF (SPAdes)	Environmental	Open in IMG/M
3300027659	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes)	Environmental	Open in IMG/M
3300027693	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027793	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaG (SPAdes)	Environmental	Open in IMG/M
3300027806	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel6S_1000h metaG (SPAdes)	Environmental	Open in IMG/M
3300027816	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG (SPAdes)	Environmental	Open in IMG/M
3300031758	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123	Environmental	Open in IMG/M
3300031787	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300031951	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120	Environmental	Open in IMG/M
3300032050	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122	Environmental	Open in IMG/M
3300032093	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA117	Environmental	Open in IMG/M
3300032116	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119	Environmental	Open in IMG/M
3300033981	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Aug2014-rr0011	Environmental	Open in IMG/M
3300033993	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2012-rr0037	Environmental	Open in IMG/M
3300033994	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME25Jul2006D11-rr0046	Environmental	Open in IMG/M
3300034061	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028	Environmental	Open in IMG/M
3300034062	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045	Environmental	Open in IMG/M
3300034073	Fracking water microbial communities from deep shales in Oklahoma, United States - MC-6-XL	Environmental	Open in IMG/M
3300034101	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19Sep2005-rr0107	Environmental	Open in IMG/M
3300034104	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120	Environmental	Open in IMG/M
3300034106	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131	Environmental	Open in IMG/M
3300034166	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13Sep2012-rr0079	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
B570J29590_1010464	3300002278	Freshwater	MTIELTRQEAEEVVKILRMMYTNHALTKAIAERLAGEPLIEFPKEPEPEEVVDAIWKVVDAEWKDLSTAEIKAIWNLTKKPSEFSTMLLAKIKEKNDLSR*
B570J40625_10000789823	3300002835	Freshwater	MTIELTTDEAEELLNILKLMYTNYALTKAIADRLAGEPLIECPKEPEPEQPVAEWKDLSTAEVKTIWNLTKKPTEFSAMLLAKIKERNDISR*
Ga0068877_102255475	3300005525	Freshwater Lake	LTIELTRDEAEELLKILKLMYTNHALTKALADRLAGEPLIEFPKEPEPEEPVDSGWKDLSTAEIKAIWNLTKKPSEFSTMLLAKIKEKN
Ga0068876_1000724113	3300005527	Freshwater Lake	MTIELARGEAEELLNILRMVYSNHELTKIISNRLAGDVLIEFPPEPVEEKPVAEWKELSTAEIKALWNVTKKPSEFASLLLAKVKEKNYE*
Ga0068876_100682075	3300005527	Freshwater Lake	LTIELTRDEAEELLKILKLMYTNHALTKALADRLAGEPLIEFPKEPESEEPIAGWKDLSTAEIKAIWNLTKKPSEFSTMLLAKIKEKNYEH*
Ga0068876_101227893	3300005527	Freshwater Lake	LTIELTRDEAEELLKILKLMYTNHALTKALADRLAGEPLIEFPKEPEPEEPVDSGWKDLSTAEIKAIWNLTKKPSEFSTMLLAKIKEKNYV*
Ga0068876_101491003	3300005527	Freshwater Lake	CTRHRSQAEGEEHLTIELTRDEAEELLKILKLMYTNHALTKDISDRLAGEPLIEFPKEPEPVEPVDSGWKDLSTAEIKAIWNLTKKPSEFSTMLLAKIKEKNYV*
Ga0068876_102367044	3300005527	Freshwater Lake	LTIELTRDEAEELLKILKLMYTNHALTKTLADRLAGEPLIEFPKEPEPEEPVDSGWKGLSTAEIKAIWNLTKKPSDFSTMLLAKIKEKNYV*
Ga0068876_106197022	3300005527	Freshwater Lake	LTIELTRDEAEELLKILKLMYTNHALTKAISDRLAGEPLIEFPKEPEPEEPVESGWKELSTAEIKAIWNLTKKPSEFSTMLLAKVKEKNYV*
Ga0068872_102880563	3300005528	Freshwater Lake	LTIELTRDEAEELLKILKLMYTNHALTKDISDRLAGEPLIEFPKEPEPVEPVDSGWKDLSTAEIKAIWNLTKKPSEFSTMLLAKIKEKNYV*
Ga0049081_100092075	3300005581	Freshwater Lentic	MTIELARGEAEELLNILRMVYSNHELTKIISNRLAGDVLIEFPPEPVEEKPVAEWKELSTAEIKTLWNVTKKPSEFASLLLAKVKEKNYD*
Ga0049080_100215362	3300005582	Freshwater Lentic	MTIELARGEAEELLNILRMVYSNHELTKIISNRLAGDVLIEFPPEPVEEKPVAEWKELSTAEIKALWNVTKKPSEFASLLLAKVKEKNYEWRQ*
Ga0070749_101923492	3300006802	Aqueous	LTIELTRDEAEELLKILKLMYTNHALTKALADRLAGEPLIEFPKEPEPEEPVAEWKDLSTAEVKAIWNLTKKPSEFAAMLLAKIKERNYEH*
Ga0070749_104811952	3300006802	Aqueous	LSIELTKEEAEELLGMLKMMYTNHPLTKVISARLAGEPLIEFPKEAPPAEGPPPTRQWKALSSAEIKALWNATKKPSEFALLLVAKLKEKNDVR*
Ga0075458_101399032	3300007363	Aqueous	LSIELTKEEAEELLGMLKMMYTNHPLTKVISARLAGEPLIEFPKEAPPVEGPPPTRQWKALSSAEIKALWNATKKPSEFALLLVAKLKEKNDVR*
Ga0114346_10298492	3300008113	Freshwater, Plankton	MTIELTTDEAEELLKILRMMYTNHALTKAIADRLAGEPLIEFPKEPEPEEPVESGWRELSSAEIKTIWNLTKKPSEFSTMLLAKIKEKNYEH*
Ga0114346_10872472	3300008113	Freshwater, Plankton	MTIELARGEAEELLNILRMVYSNHELTKIISNRLAGDVLIEFPPEPVEEKPVAEWKELSTAEIKALWNVTKKPSEFASLLLAKVKEKNYEWRP*
Ga0114346_12706333	3300008113	Freshwater, Plankton	AREEAEELLKILKLMYTNHALTKALADRLAGEPLIEFPKEPEPEEPVDSGWKDLSTAEIKAIWNLTKKPSEFSTMLLAKIKEKNYV*
Ga0114350_11690692	3300008116	Freshwater, Plankton	MTIELARGEAEELLNILKMVYSNHELTKIISNRLAGDVLIEFPPEPVEEKPVAEWKELSTAEIKALWNVTKKPSEFASLLLAKVKEKNYEWRP*
Ga0114355_10151921	3300008120	Freshwater, Plankton	NILKMVYSNHELTKIISNRLAGDVLIEFPPEPVEEKPVAEWKELSTAEIKALWNVTKKPSEFASLLLAKVKEKNYEWRP*
Ga0114355_11331463	3300008120	Freshwater, Plankton	MTIELARGEAEELLNILRMVYSNHELTKIISNRLAGDVLIEFPPEPVEEKPVAEWKELSTAEIKTLWNVTKKPSEFACLLLAKVKEKNYEWRP*
Ga0114363_10487195	3300008266	Freshwater, Plankton	LTIELARGEAEELLNILKMVYSNHELTKIISNRLAGDGLIEFPPEPVEEKPVAEWKELSTAEIKALWNVTKKPSEFASLLLAKVKEKNYES*
Ga0114363_10607013	3300008266	Freshwater, Plankton	MTIELTKDEAEELLKILKLMYTNHALTKALADRLAGEPLIEFPKEPEPEEPVESGWKELSTAEIKAIWNLTKKPSEFSTMLLAKVKEKNYV*
Ga0114363_10817743	3300008266	Freshwater, Plankton	WQFCTRHRSQAEGEEHLTIELTRDEAEELLKILKLMYTNHALTKDISDRLAGEPLIEFPKEPEPVEPVDSGWKDLSTAEIKAIWNLTKKPSEFSTMLLAKIKEKNYV*
Ga0114363_10966432	3300008266	Freshwater, Plankton	MNHLKIRGALMTIELAREEAEELLKILKLMYTNHALTKALADRLAGEPLIEFPKEPEPEEPVDSGWKDLSTAEIKAIWNLTKKPSEFSTMLLAKIKEKNYV*
Ga0114363_11230762	3300008266	Freshwater, Plankton	MTIELTRNEAEELLKILRLMYTNHALTKALADRLAGEPLIKFPKEPEPEEPVAEWKDLSTAEVKAIWNLTKKPSEFAAMLLAKIKERNYEY*
Ga0114363_11421602	3300008266	Freshwater, Plankton	MTIELARGEAEELLNILRMVYSNHELTKIISNRLAGDVLIELPPEPVEEKPVAEWKELSTAEIKTLWNVTKKPSEFACLLLAKVKEKNYEWRP*
Ga0114363_11440812	3300008266	Freshwater, Plankton	LTIELTRDEAEELLKILKLMYTNHALTKAISDRLAGEPLIEFPKEPEPEEPVDSGWKDLSTAEIKAIWNLTKKPSEFATMLLAKVKEKNYV*
Ga0114363_11463852	3300008266	Freshwater, Plankton	MTIELARGEAEELLNILRMVYSNHELTKTISNRLAGDVLIEFPPEPVEEKPVAEWKELSTAEIKTLWNVTKKPSEFASLLLAKVKEKNYEWRQ*
Ga0114363_11892933	3300008266	Freshwater, Plankton	LKILKLMYTNHALTKALADRLAGEPLIEFPKEPEPEEPVDSGWKDLSTAEIKAIWNLTKKPSEFSTMLLAKIKEKNYV*
Ga0114878_10913741	3300008339	Freshwater Lake	WQFCTRHRSQAEGEEHLTIELTRDEAEELLKILKLMYTNHALTKALADRLAGEPLIEFPKEPESEEPIAGWKDLSTAEIKAIWNLTKKPSEFSTMLLAKIKEKNYEH*
Ga0114880_10490173	3300008450	Freshwater Lake	LTIELARGEAEELLNILKMVYSNHELTKIISNRLAGDVLIEFPPEPVEEKPVAEWKELSTAEIKALWNVTKKPSEFASLLLAKVKEKNYES*
Ga0114880_10709852	3300008450	Freshwater Lake	LTIELTRDEAEELLKILKLMYTNHALTKTLADRLAGEPLIEFPKEPEPEEPVDSGWKDLSTAEIKAIWNLTKKPSEFATMLSAKVKEKNYV*
Ga0105098_101867153	3300009081	Freshwater Sediment	LTIELARGEAEELLNILRMVYSNHELTKIISNRLAGDVLIEFPPEPVEEKPVAEWKELSTAEIKALWNVTKKPSEFASLLLAKVKEKNYEWRP*
Ga0105098_106890312	3300009081	Freshwater Sediment	MTIELARGEAEELLNILRMVYSNHELTKAISNRLAGDVLIEFPPEPVEEKPVAEWKELSTAEIKTLWNVTKKPSEFASLLLAKVKEKNYEWRP*
Ga0105103_106594461	3300009085	Freshwater Sediment	TIELARGEAEELLNILRMVYSNHELTKTISNRLAGDVLIEFPPEPVEEKPVAEWKELSTAEIKTLWNVTKKPSEFASLLLAKVKEKNT*
Ga0105102_100318924	3300009165	Freshwater Sediment	MTIELARGEAEELLNILRMVYSNHELTKAISNRLAGDVLIELPPEPVEEKPVAEWKELSTAEIKTLWNVTKKPSEFASLLLAKVKEKNYES*
Ga0105102_109338921	3300009165	Freshwater Sediment	LTIELARGEAEELLNILRMVYSNHELTKIISNRLAGDVLIEFPPEPVEEKPVAEWKELSTAEIKALWNVTKKPSEFASLLLAKVKEKNYES*
Ga0129333_1002334913	3300010354	Freshwater To Marine Saline Gradient	LSIELTKNEAEELLGMLKMMYTNHPLTKVISARLAGEPLIEFPKEAPPVEGPPPTRQWKALSSAEIKALWNATKKPSEFALLLVAKLKEKNDVR*
Ga0129333_100539186	3300010354	Freshwater To Marine Saline Gradient	LTIELTRDEAEELLKILKLMYTNHALTKAIAERLAGEPLIEFPKEPEPEEPVAEWKDLSTAEVKTIWNLTKKPTEFSAMLLAKIKEKNYES*
Ga0129333_100679088	3300010354	Freshwater To Marine Saline Gradient	MTIELTRNEAEELLKILRLMYTNHALTKALADRLAGEPLIEFPKEPEPVEPVAEWKDLSTAEIKAIWNLTKKPSEFAAMLLAKIKDRNDILR*
Ga0129333_101376844	3300010354	Freshwater To Marine Saline Gradient	MYTNHALTKALADRLAGEPLIEFPKEPEEDGGSCGNCGDAGCKFCDARFLVQEWKDLSTAEIKAIWNLTKKLSEFSTMLLAKIKEKNYV*
Ga0129333_101834722	3300010354	Freshwater To Marine Saline Gradient	LTIELTRDEAEELLKILRLMYTNHALTKALADRLAGEPLIEFPKEPEPEELVAEWKDLSTAEVKAIWNLTKKPSEFSTMLLAKIKEKNYES*
Ga0129333_103459653	3300010354	Freshwater To Marine Saline Gradient	MTIELAREEAEELLKILKLMYTNHALTKALADRLAGEPLIKFPKEPEPEEPVAEWKDLSTAEVKTIWNLTKKPSDFSTMLLAKVKEKNYE*
Ga0129333_103863212	3300010354	Freshwater To Marine Saline Gradient	MTIELTREEAEELLKILRLMYTNHDLTKALANRLAGEPLIEFPKEPEPEQPVEEWKDLSTAEIKAIWNLTKKPTDFAAMLLAKIKERNDISR*
Ga0129336_100860073	3300010370	Freshwater To Marine Saline Gradient	RSQAEGEEHLTIELTRDEAEELLKILKLMYTNHALTKAIAERLAGEPLIEFPKEPEPEEPVAEWKDLSTAEVKTIWNLTKKPTEFSAMLLAKIKEKNYES*
Ga0164293_100683563	3300013004	Freshwater	LTIELARGEAEELLNILKMVYSNHELTKIISNRLAGDVLIELPPEPVEEKPVAEWKELSTAEIKALWNVTKKPSEFASLLLAKVKEKNYE*
Ga0177922_104721832	3300013372	Freshwater	LSIELTKDEAEELLGMLKMMYTNHPLTKVISARLAGEPLIEFPKEAPPVEGPPPTRQWKALSSAEIKALWNATKKPSEFALLLVAKLKEKNDVR*
Ga0181352_11561491	3300017747	Freshwater Lake	LSIELTKDEAEELLGMLKMMYTNHPLTKVINARLAGEPLIEFPKEAPPVEGPPPTRQWKALSSAEIKALWNATKKPSEFALLLVAKLKEKNDVW
Ga0181344_11525922	3300017754	Freshwater Lake	MTIELARGEAEELLNILRMVYSNHELTKTISNRLAGDVLIEFPPEPVEEKPVAEWKELSTAEIKALWNVTKKPSEFASLLLAKVKEKNYEWRP
Ga0208091_10034643	3300020506	Freshwater	MTIELTRQEAEEVVKILRMMYTNHALTKAIAERLAGEPLIEFPKEPEPEEVVDAIWKVVDAEWKDLSTAEIKAIWNLTKKPSEFSTMLLAKIKEKNDLSR
Ga0208364_100052021	3300020533	Freshwater	MTIELTTDEAEELLNILKLMYTNYALTKAIADRLAGEPLIECPKEPEPEQPVAEWKDLSTAEVKTIWNLTKKPTEFSAMLLAKIKERNDISR
Ga0207939_10277511	3300020536	Freshwater	TRQEAEEVVKILRMMYTNHALTKAIAERLAGEPLIEFPKEPEPEEVVDAIWKVVDAEWKDLSTAEVKTIWNLTKKPTEFSAMLLAKIKERNDISR
Ga0181353_10203572	3300022179	Freshwater Lake	MTIELAREEAEELLKILKLMYTNHALTKALADRLAGEPLIEFPKEPEPEEPVDSGWKDLSTAEIKAIWNLTKKPSEFSTMLLAKIKEKNYV
Ga0181353_11284672	3300022179	Freshwater Lake	LTIELTRDEAEELLKILKLMYTNHALTKAIADRLAGESLIEFPKEPEPEKVVDAIWKVVDAGWKDLSTAEIKAIWNLTKKPTEFATMLLAKIKEKNDLSR
Ga0214917_100809134	3300022752	Freshwater	LTIELTRDEAEELLKILKLMYTNHALTKALADRLAGEPLIEFPKEPEPEEPVAEWKDLSTAEIKAIWNLTKKPSEFSTMLLAKIKERNYEH
Ga0208644_11722342	3300025889	Aqueous	LTIELTRDEAEELLKILKLMYTNHALTKALADRLAGEPLIEFPKEPEPEEPVAEWKDLSTAEVKAIWNLTKKPSEFAAMLLAKIKERNYEH
Ga0208974_10882942	3300027608	Freshwater Lentic	MTIELARGEAEELLNILRMVYSNHELTKIISNRLAGDVLIEFPPEPVEEKPVAEWKELSTAEIKALWNVTKKPSEFASLLLAKVKEKNYEWRQ
Ga0208975_10220741	3300027659	Freshwater Lentic	MTIELARGEAEELLNILRMVYSNHELTKIISNRLAGDVLIEFPPEPVEEKPVAEWKELSTAEIKTLWNVTKKPSEFASLLLAKVKEKNYEWRP
Ga0209704_12187092	3300027693	Freshwater Sediment	LTIELARGEAEELLNILRMVYSNHELTKIISNRLAGDVLIEFPPEPVEEKPVAEWKELSTAEIKTLWNVTKKPSEFASLLLAKVKEKNYES
Ga0209972_101500753	3300027793	Freshwater Lake	LTIELTRDEAEELLKILKLMYTNHALTKALADRLAGEPLIEFPKEPEPEEPVDSGWKDLSTAEIKAIWNLTKKPSEFSTMLLAKIKEKNYEH
Ga0209972_102375981	3300027793	Freshwater Lake	LTIELTRDEAEELLKILKLMYTNHALTKDISDRLAGEPLIEFPKEPEPVEPVDSGWKDLSTAEIKAIWNLTKKPSEFSTMLLAKIKEKNYV
Ga0209985_101268565	3300027806	Freshwater Lake	LTIELTRDEAEELLKILKLMYTNHALTKALADRLAGEPLIEFPKEPEPEEPVDSGWKDLSTAEIKAIWNLTKKPSE
Ga0209990_1001471411	3300027816	Freshwater Lake	LTIELTRDEAEELLKILKLMYTNHALTKALADRLAGEPLIEFPKEPEPEEPLDSGWKDLSTAEIKAIWNLTKKPSEFSTMLLAKIKEKNYV
Ga0209990_104725321	3300027816	Freshwater Lake	LTIELTRDEAEELLKILKLMYTNHALTKTLADRLAGEPLIEFPKEPEPEEPVDSGWKGLSTAEIKAIWNLTKKPSDFST
Ga0315907_101597436	3300031758	Freshwater	LTIELTRDEAEELLKILKLMYTNHALTKALADRLAGEPLIEFPKEPEPEEPVDSGWKDLSTAEIKAIWNLTKKPSDFSTMLLAKIKEKNYV
Ga0315907_108270422	3300031758	Freshwater	MTIELARGEAEELLNILRMVYSNHELTKIISNRLAGDVLIELPPEPVEEKPVAEWKELSTAEIKTLWNVTKKPSEFACLLLAKVKEKNYEWRP
Ga0315900_100940254	3300031787	Freshwater	LTIELTRDEAEELLKILKLMYTNHALTKALADRLAGEPLIEFPKEPEPEEPVDSGWKDLSTAEIKAIWNLTKKPSEFSTMLLAKIKEKNYV
Ga0315900_103175644	3300031787	Freshwater	LMYTNHALTKALADRLAGEPLIEFPKEPEPEEPLDSGWKDLSTAEIKAIWNLTKKPSEFSTMLLAKIKEKNYV
Ga0315909_100516314	3300031857	Freshwater	MTIELARGEAEELLNILKMVYSNHELTKIISNRLAGDVLIEFPPEPVEEKPVAEWKELSTAEIKALWNVTKKPSEFASLLLAKVKEKNYEWRP
Ga0315909_100523441	3300031857	Freshwater	AEELLKILKLMYTNHALTKALADRLAGEPLIEFPKEPEPEEPLDSGWKDLSTAEIKAIWNLTKKPSEFSTMLLAKIKEKNYV
Ga0315909_101332501	3300031857	Freshwater	AEELLKILKLMYTNHALTKAISDRLAGEPLIEFPKEPEPEEPVESGWKELSTAEIKAIWNLTKKPSEFSTMLLAKVKEKNYV
Ga0315909_101582993	3300031857	Freshwater	YSQYWQFCTRHRSQAEGEEHLTIELTRDEAEELLKILKLMYTNHALTKALADRLAGEPLIEFPKEPESEEPIAGWKDLSTAEIKAIWNLTKKPSEFSTMLLAKIKEKNYEH
Ga0315909_102042325	3300031857	Freshwater	LTIELTRDEAEELLKILKLMYTNHALTKTLADRLAGEPLIEFPKEPEPEEPVDSGWKGLSTAEIKAIWNLTKKPSDFSTMLLAKIKEKNYV
Ga0315909_105129573	3300031857	Freshwater	LTIELTRDEAEELLKILKLMYTNHALTKAISDRLAGEPLIEFPKEPEPEEPVDSGWKDLSTAEIKAIWNLTKKPSEFATMLLAKVKEKNYV
Ga0315904_101825541	3300031951	Freshwater	YSQYWQFCTRHRSQAEGEEHLTIELTRDEAEELLKILKLMYTNHALTKDISDRLAGEPLIEFPKEPEPVEPVDSGWKDLSTAEIKAIWNLTKKPSEFSTMLLAKIKEKNYV
Ga0315904_101889852	3300031951	Freshwater	LTIELTRDEAEELLKILKLMYTNHALTKAISDRLAGEPLIEFPKEPEPEEPVESGWKELSTAEIKAIWNLTKKPSEFSTMLLAKVKEKNYV
Ga0315904_102136013	3300031951	Freshwater	LTIELARGEAEELLNILKMVYSNHELTKIISNRLAGDMLIELPPEPVEEKPVAEWKELSTAEIKALWNVTKKPSEFASLLLAKVKEKNYEWRP
Ga0315904_102456063	3300031951	Freshwater	MTIELTRNEAEELLKILRLMYTNHALTKALADRLAGEPLIKFPKEPEPEEPVAEWKDLSTAEVKAIWNLTKKPSEFAAMLLAKIKERNYEY
Ga0315904_110168973	3300031951	Freshwater	AEELLKILKLMYTNHALTKAISDRLAGEPLIEFPKEPEPEEPVDSGWKDLSTAEIKAIWNLTKKPSEFATMLLAKVKEKNYV
Ga0315904_110510492	3300031951	Freshwater	LTIELARGEAEELLNILKMVYSNHELTKIISNRLAGDVLIEFPPEPVEEKPVAEWKELSTAEIKALWNVTKKPSEFASLLLAKVKEKNYES
Ga0315904_114049281	3300031951	Freshwater	MTIELARGEAEELLNILRMVYSNHELTKIISNRLAGDVLIEFPPEPVEEKPVAEWKELSTAEIKTLWNVTKKPSEFASLLLAKVKEKNYE
Ga0315904_114511913	3300031951	Freshwater	LTIELTRDEAEELLKILKLMYTNHALTKALADRLAGEPLIEFPKEPEPEEPVDSGWKDLSTAEIKAIWNLTKKPSDFSTMLLAKI
Ga0315906_100474732	3300032050	Freshwater	LTIELTRDEAEELLKILKLMYTNHALTKALADRLAGEPLIEFPKEPESEEPIAGWKDLSTAEIKAIWNLTKKPSEFSTMLLAKIKEKNYEH
Ga0315906_1007786810	3300032050	Freshwater	YWQFCTRHRSQAEGEEHLTIELTRDEAEELLKILKLMYTNHALTKDISDRLAGEPLIEFPKEPEPVEPVDSGWKDLSTAEIKAIWNLTKKPSEFSTMLLAKIKEKNYV
Ga0315906_102133791	3300032050	Freshwater	TRDEAEELLKILKLMYTNHALTKALADRLAGEPLIEFPKEPEPEEPLDSGWKDLSTAEIKAIWNLTKKPSEFSTMLLAKIKEKNYV
Ga0315906_110838591	3300032050	Freshwater	DEAEELLKILKLMYTNHALTKAISDRLAGEPLIEFPKEPEPEEPVESGWKELSTAEIKAIWNLTKKPSEFSTMLLAKVKEKNYV
Ga0315902_106442833	3300032093	Freshwater	MTIELARGEAEELLNILRMVYSNHELTKTISNRLAGDVLIEFPPEPVEEKPVAEWKELSTAEIKALWNVTKKPSEFASLLLAKVKEKNYE
Ga0315903_100571361	3300032116	Freshwater	AEELLKILKLMYTNHALTKALADRLAGEPLIEFPKEPEPEEPVDSGWKDLSTAEIKAIWNLTKKPSEFSTMLLAKIKEKNYV
Ga0315903_101336472	3300032116	Freshwater	MTIELTKDEAEELLKILKLMYTNHALTKAISDRLAGEPLIEFPKEPEPEEPVESGWKELSTAEIKAIWNLTKKPSEFSTMLLAKVKEKNYV
Ga0334982_0001901_5345_5620	3300033981	Freshwater	MTIELAREEAEELLKILKLMYTNHALTKAIADRLAGEPLIEFPKEPEPVEPVDSGWKELSTAEIKAIWNLTKKPSEFSTMLLAKVKEKNYV
Ga0334994_0087362_1_231	3300033993	Freshwater	MTIELARGEAEELMNILRMVYSNHELTKIISNRLAGDVLIEFPPEPVEEKPVAEWKELSTAEIKTLWNVTKKPSEFA
Ga0334996_0000554_23431_23712	3300033994	Freshwater	MTIELARGEAEELLNILRMVYSNHELTKAISNRLAGDVLIEFPPEPVEEKPVAEWKELSTAEIKTLWNVTKKPSEFASLLLAKVKEKNYEWRP
Ga0334987_0092575_1268_1549	3300034061	Freshwater	MTIELARGEAEELLNILRMVYSNHELTKTISNRLAGDVLIELPPEPVEEKPVAEWKELSTAEIKTLWNVTKKPSEFASLLLAKVKEKNYEWRP
Ga0334995_0063419_292_564	3300034062	Freshwater	LTIELARGEAEELLNILKMVYSNHELTKAISNRLAGDVLIEFPPEPVEEKPVAEWKELSTAEIKALWNVTKKPSEFASLLLAKVKEKNYE
Ga0310130_0000665_4808_5086	3300034073	Fracking Water	LTIELTRDEAEELLKILKLMYTNHALTKALADRLAGEPLIEFPKEPEPEEPVAEWKDLSTAEVKAIWNLTKKPSEFAAMLLAKIKERNDILR
Ga0335027_0870990_137_409	3300034101	Freshwater	MTIELARGEAEELLNILKMVYSNHELTKIISNRLAGDVLIEFPPEPVEEKPVAEWKELSTAEIKTLWNVTKKPSEFASLLLAKVKEKNYE
Ga0335031_0416491_285_566	3300034104	Freshwater	LTIELARGEAEELLNILKMVYSNHELTKIISNRLARDVLIELPPEPVEEKPVAEWKELSTAEIKTLWNVTKKPSEFASLLLAKVKEKNYEWRP
Ga0335031_0475443_491_766	3300034104	Freshwater	MTIELARGEAEELLNILRMVYSNHELTKAISNRLAGDVLIEFPPEPVEEKPVAEWKELSTAEIKALWNVTKKPSEFASLLLAKVKEKNYES
Ga0335036_0000473_20781_21083	3300034106	Freshwater	MTIELTRQEAEEVVKILRMMYTNHALTKAIADRLAGEPLIEFPKEPEPEEVVDAIWKVVDAGWKDLSTAEIKAIWNLTKKPSEFSTMLLAKIKERNDISR
Ga0335036_0182257_985_1266	3300034106	Freshwater	LTIELARGEAEELLNILKMVYSNHELTKIISNRLAGDVLIEFPPEPVEEKPVAEWKELSTAEIKALWNVTKKPSEFASLLLAKVKEKNYEWRP
Ga0335016_0009236_2889_3164	3300034166	Freshwater	MTIELARDEAEDLLNILKLMYTNHALTKALADRLAGEPLIEFPKEPEPEEPVDSGWKDLSTAEVKTIWNLTKKPSEFSAMLLAKIKEKNYE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F100710

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences