Metagenome Family F100700

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F100700
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	69 residues
Representative Sequence	MIIKLKQKSTLEITVETQVKEALALRKGSVAGTKSLIDESNNYHFTITKREIKRIADENGIETLKKGQNV
Number of Associated Samples	59
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	19.61 %
% of genes from short scaffolds (< 2000 bps)	81.37 %
Associated GOLD sequencing projects	51
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (80.392 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (50.000 % of family members)
Environment Ontology (ENVO)	Unclassified (67.647 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (73.529 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 25.51% β-sheet: 3.06% Coil/Unstructured: 71.43%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF09643	YopX	19.61
PF00072	Response_reg	0.98
PF03796	DnaB_C	0.98
PF00145	DNA_methylase	0.98
PF13395	HNH_4	0.98
PF01165	Ribosomal_S21	0.98
PF04851	ResIII	0.98
PF03237	Terminase_6N	0.98
PF00749	tRNA-synt_1c	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0008	Glutamyl- or glutaminyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.98
COG0270	DNA-cytosine methylase	Replication, recombination and repair [L]	0.98
COG0305	Replicative DNA helicase	Replication, recombination and repair [L]	0.98
COG0828	Ribosomal protein S21	Translation, ribosomal structure and biogenesis [J]	0.98
COG1066	DNA repair protein RadA/Sms, contains AAA+ ATPase domain	Replication, recombination and repair [L]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.39 %
All Organisms	root	All Organisms	19.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.39 %
cellular organisms	root	All Organisms → cellular organisms	12.75 %
Viruses	superkingdom	All Organisms → Viruses	6.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.39 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	10.78 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	5.88 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.39 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	5.88 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.94 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	1.96 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	1.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.39 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	5.88 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2.94 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1.96 %
Candidatus Pacearchaeota	clade	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota	1.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.39 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	5.88 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	1.96 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	1.96 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	0.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.39 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	5.88 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1.96 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	1.96 %
Candidatus Gracilibacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Candidatus Gracilibacteria	0.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.39 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5.88 %
Peptostreptococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptostreptococcaceae	1.96 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	1.96 %
Candidatus Gracilibacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Candidatus Gracilibacteria	0.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.39 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5.88 %
Paeniclostridium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptostreptococcaceae → Paeniclostridium	1.96 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	1.96 %
Candidatus Gracilibacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Candidatus Gracilibacteria	0.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.39 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5.88 %
Paeniclostridium ghonii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptostreptococcaceae → Paeniclostridium → Paeniclostridium ghonii	1.96 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	1.96 %
Candidatus Gracilibacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Candidatus Gracilibacteria	0.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002404\|B570J29591_1000375	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5086	Open in IMG/M
3300002835\|B570J40625_100043484	Not Available	6600	Open in IMG/M
3300003394\|JGI25907J50239_1120076	Not Available	510	Open in IMG/M
3300003404\|JGI25920J50251_10083260	Not Available	762	Open in IMG/M
3300005580\|Ga0049083_10327128	Not Available	511	Open in IMG/M
3300005582\|Ga0049080_10033883	Not Available	1780	Open in IMG/M
3300005583\|Ga0049085_10018512	Not Available	2650	Open in IMG/M
3300006802\|Ga0070749_10379277	Not Available	782	Open in IMG/M
3300006805\|Ga0075464_10802759	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300006917\|Ga0075472_10428262	Not Available	656	Open in IMG/M
3300007559\|Ga0102828_1044034	Not Available	1027	Open in IMG/M
3300007559\|Ga0102828_1052166	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	952	Open in IMG/M
3300007559\|Ga0102828_1140446	Not Available	602	Open in IMG/M
3300007708\|Ga0102859_1084775	Not Available	904	Open in IMG/M
3300007708\|Ga0102859_1109202	Not Available	799	Open in IMG/M
3300007708\|Ga0102859_1111936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptostreptococcaceae → Paeniclostridium → Paeniclostridium ghonii	789	Open in IMG/M
3300009075\|Ga0105090_10772253	Not Available	584	Open in IMG/M
3300009081\|Ga0105098_10622111	Not Available	565	Open in IMG/M
3300009082\|Ga0105099_10262047	Not Available	1004	Open in IMG/M
3300009085\|Ga0105103_10020957	Not Available	3209	Open in IMG/M
3300009155\|Ga0114968_10032770	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3466	Open in IMG/M
3300009163\|Ga0114970_10003439	Not Available	11638	Open in IMG/M
3300009163\|Ga0114970_10758504	Not Available	512	Open in IMG/M
3300009181\|Ga0114969_10118279	Not Available	1692	Open in IMG/M
3300010885\|Ga0133913_10558224	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3011	Open in IMG/M
3300012017\|Ga0153801_1011549	Not Available	1601	Open in IMG/M
3300012017\|Ga0153801_1021923	Not Available	1135	Open in IMG/M
3300012017\|Ga0153801_1065324	Not Available	639	Open in IMG/M
3300012667\|Ga0157208_10001276	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5826	Open in IMG/M
3300012667\|Ga0157208_10004929	All Organisms → cellular organisms → Bacteria	2176	Open in IMG/M
3300012667\|Ga0157208_10028661	Not Available	746	Open in IMG/M
3300012667\|Ga0157208_10047389	Not Available	584	Open in IMG/M
3300013372\|Ga0177922_10908902	Not Available	1317	Open in IMG/M
3300013372\|Ga0177922_11262499	Not Available	961	Open in IMG/M
3300017701\|Ga0181364_1018607	Not Available	1148	Open in IMG/M
3300017716\|Ga0181350_1080549	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Candidatus Gracilibacteria	824	Open in IMG/M
3300017722\|Ga0181347_1148263	Not Available	641	Open in IMG/M
3300017736\|Ga0181365_1020741	Not Available	1655	Open in IMG/M
3300017736\|Ga0181365_1052613	Not Available	1016	Open in IMG/M
3300017736\|Ga0181365_1104701	Not Available	683	Open in IMG/M
3300017736\|Ga0181365_1111604	Not Available	658	Open in IMG/M
3300017747\|Ga0181352_1100445	Not Available	794	Open in IMG/M
3300017754\|Ga0181344_1006082	All Organisms → cellular organisms → Bacteria	4027	Open in IMG/M
3300017754\|Ga0181344_1054085	Not Available	1195	Open in IMG/M
3300017761\|Ga0181356_1014730	Not Available	2932	Open in IMG/M
3300017761\|Ga0181356_1096621	Not Available	966	Open in IMG/M
3300017761\|Ga0181356_1115665	Not Available	861	Open in IMG/M
3300017766\|Ga0181343_1062771	Not Available	1080	Open in IMG/M
3300017766\|Ga0181343_1101447	Not Available	817	Open in IMG/M
3300017777\|Ga0181357_1068751	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1364	Open in IMG/M
3300017777\|Ga0181357_1122476	Not Available	974	Open in IMG/M
3300017777\|Ga0181357_1177134	Not Available	773	Open in IMG/M
3300017777\|Ga0181357_1213999	Not Available	682	Open in IMG/M
3300017777\|Ga0181357_1278041	Not Available	575	Open in IMG/M
3300017780\|Ga0181346_1063681	All Organisms → Viruses → Predicted Viral	1474	Open in IMG/M
3300017780\|Ga0181346_1088388	Not Available	1213	Open in IMG/M
3300017780\|Ga0181346_1103182	Not Available	1105	Open in IMG/M
3300017784\|Ga0181348_1087532	Not Available	1229	Open in IMG/M
3300017785\|Ga0181355_1150918	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	938	Open in IMG/M
3300017785\|Ga0181355_1199538	Not Available	787	Open in IMG/M
3300017785\|Ga0181355_1262247	Not Available	660	Open in IMG/M
3300017785\|Ga0181355_1313679	Not Available	585	Open in IMG/M
3300017785\|Ga0181355_1329257	Not Available	566	Open in IMG/M
3300017785\|Ga0181355_1338122	Not Available	556	Open in IMG/M
3300019784\|Ga0181359_1007682	All Organisms → cellular organisms → Bacteria	3686	Open in IMG/M
3300019784\|Ga0181359_1029442	Not Available	2115	Open in IMG/M
3300019784\|Ga0181359_1045947	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	1687	Open in IMG/M
3300019784\|Ga0181359_1069023	All Organisms → cellular organisms → Bacteria	1341	Open in IMG/M
3300019784\|Ga0181359_1091306	Not Available	1128	Open in IMG/M
3300019784\|Ga0181359_1091625	Not Available	1126	Open in IMG/M
3300019784\|Ga0181359_1127240	Not Available	903	Open in IMG/M
3300019784\|Ga0181359_1260496	Not Available	520	Open in IMG/M
3300020048\|Ga0207193_1656739	Not Available	696	Open in IMG/M
3300020561\|Ga0207934_1081786	Not Available	533	Open in IMG/M
3300021962\|Ga0222713_10308915	Not Available	1004	Open in IMG/M
3300021963\|Ga0222712_10004852	Not Available	13879	Open in IMG/M
3300022190\|Ga0181354_1222318	Not Available	551	Open in IMG/M
3300022190\|Ga0181354_1246410	Not Available	511	Open in IMG/M
3300022407\|Ga0181351_1277152	Not Available	506	Open in IMG/M
3300024346\|Ga0244775_10379974	Not Available	1163	Open in IMG/M
3300024348\|Ga0244776_10404964	Not Available	904	Open in IMG/M
3300027193\|Ga0208800_1012517	Not Available	1091	Open in IMG/M
3300027193\|Ga0208800_1023671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptostreptococcaceae → Paeniclostridium → Paeniclostridium ghonii	815	Open in IMG/M
3300027627\|Ga0208942_1052286	Not Available	1249	Open in IMG/M
3300027707\|Ga0209443_1186488	Not Available	736	Open in IMG/M
3300027707\|Ga0209443_1191295	Not Available	724	Open in IMG/M
3300027736\|Ga0209190_1022620	Not Available	3494	Open in IMG/M
3300027754\|Ga0209596_1001484	Not Available	20138	Open in IMG/M
3300027754\|Ga0209596_1071321	Not Available	1725	Open in IMG/M
3300027785\|Ga0209246_10047048	Not Available	1659	Open in IMG/M
3300027798\|Ga0209353_10399512	Not Available	564	Open in IMG/M
3300027808\|Ga0209354_10051835	Not Available	1654	Open in IMG/M
3300027808\|Ga0209354_10072855	Not Available	1394	Open in IMG/M
3300027808\|Ga0209354_10304131	Not Available	634	Open in IMG/M
3300027892\|Ga0209550_10271737	All Organisms → cellular organisms → Bacteria	1107	Open in IMG/M
3300027899\|Ga0209668_10111077	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1609	Open in IMG/M
3300027972\|Ga0209079_10010345	Not Available	3116	Open in IMG/M
3300027972\|Ga0209079_10321820	Not Available	523	Open in IMG/M
3300028025\|Ga0247723_1014547	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2862	Open in IMG/M
3300032018\|Ga0315272_10143125	Not Available	1122	Open in IMG/M
3300033996\|Ga0334979_0676273	Not Available	541	Open in IMG/M
3300034107\|Ga0335037_0039458	Not Available	2540	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.02%
Terrestrial	Environmental → Terrestrial	0.98%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	84.31%
Marine	Environmental → Aquatic → Marine	14.71%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.98%

Habitat	Taxonomy	Distribution
Lentic	Environmental → Aquatic → Freshwater → Lentic	57.84%
Lake	Environmental → Aquatic → Freshwater → Lake	16.67%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	8.82%
Sediment	Environmental → Aquatic → Freshwater → Sediment	5.88%
Lotic	Environmental → Aquatic → Freshwater → Lotic	3.92%
Coastal	Environmental → Aquatic → Marine → Coastal	2.94%
Unclassified	Environmental → Aquatic → Marine → Unclassified	2.94%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	53.92%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	14.71%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	8.82%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	5.88%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	3.92%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	2.94%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	2.94%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	2.94%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.96%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.98%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	50.00%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	8.82%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	7.84%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	5.88%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	4.90%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	3.92%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	3.92%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	2.94%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	2.94%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.96%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	1.96%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.98%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.98%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment	0.98%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	0.98%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002404	Freshwater microbial communities from Lake Mendota, WI - 22APR2009 deep hole epilimnion	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003394	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN	Environmental	Open in IMG/M
3300003404	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DCMD	Environmental	Open in IMG/M
3300005580	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRF	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M
3300005583	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG SU08MSRF	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental	Open in IMG/M
3300006917	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_<0.8_DNA	Environmental	Open in IMG/M
3300007559	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541	Environmental	Open in IMG/M
3300007708	Estuarine microbial communities from the Columbia River estuary - metaG 1371B-02	Environmental	Open in IMG/M
3300009075	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009082	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015	Environmental	Open in IMG/M
3300009085	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009155	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG	Environmental	Open in IMG/M
3300009163	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG	Environmental	Open in IMG/M
3300009181	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300012017	Freshwater microbial communities from Central Basin Lake Erie, Ontario, Canada - Station 1208 - Top - Depth 1m	Environmental	Open in IMG/M
3300012667	Freshwater microbial communities from Maskinonge River, Ontario, Canada - S15	Environmental	Open in IMG/M
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental	Open in IMG/M
3300017701	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.S.N	Environmental	Open in IMG/M
3300017716	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.DCM.D	Environmental	Open in IMG/M
3300017722	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.N	Environmental	Open in IMG/M
3300017736	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.D.N	Environmental	Open in IMG/M
3300017747	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.S.N	Environmental	Open in IMG/M
3300017754	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.D.D	Environmental	Open in IMG/M
3300017761	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.N	Environmental	Open in IMG/M
3300017766	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.D	Environmental	Open in IMG/M
3300017777	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.N	Environmental	Open in IMG/M
3300017780	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.D.N	Environmental	Open in IMG/M
3300017784	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.D.N	Environmental	Open in IMG/M
3300017785	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.N	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300020048	Microbial communities from Manganika and McQuade lakes, Minnesota, USA Combined Assembly of Gp0225457, Gp0225456, Gp0225455, Gp0225454, Gp0225453, Gp0224915	Environmental	Open in IMG/M
3300020561	Freshwater microbial communities from Lake Mendota, WI - 22APR2009 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300022190	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.N	Environmental	Open in IMG/M
3300022407	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.D	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300024348	0.2um to 3um size fraction coassembly	Environmental	Open in IMG/M
3300027193	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541 (SPAdes)	Environmental	Open in IMG/M
3300027627	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG SU08MSRF (SPAdes)	Environmental	Open in IMG/M
3300027707	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DCMD (SPAdes)	Environmental	Open in IMG/M
3300027736	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027754	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027785	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027798	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD (SPAdes)	Environmental	Open in IMG/M
3300027808	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD (SPAdes)	Environmental	Open in IMG/M
3300027892	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027899	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)	Environmental	Open in IMG/M
3300027972	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300028025	Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 5H_FC	Environmental	Open in IMG/M
3300032018	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_middle	Environmental	Open in IMG/M
3300033996	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2016-rr0004	Environmental	Open in IMG/M
3300034107	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Apr2017-rr0133	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
B570J29591_10003757	3300002404	Freshwater	MIIKLKQKSTLQITVETQVKEALALRKGSIGGTKSLIDESNNYHFTITKREIKKIADANGIATVKRGKNV*
B570J40625_1000434841	3300002835	Freshwater	MIIKLKQKSTLQITVETQVKEALKLRNGSVGGTKSLIDESNNYHFTITKREIKKIADANGIATVKRGKNV*
JGI25907J50239_11200762	3300003394	Freshwater Lake	MIIKLKQNSILKLTVEAQIKEALALRKGSVAGTKSLIDESNNYSFTVTKREIKRIADENGIATLKRGQNG*
JGI25920J50251_100832603	3300003404	Freshwater Lake	MIIKLKQNSILKLTVEAQVKEALALRKGSVNGTKSLIDESNNYSFTITKREIKRIADENGIETLKKGQNG*
Ga0049083_103271281	3300005580	Freshwater Lentic	MIIKLKKDSTLQITVETQVKEALALRKGSVGGTKSLIDESNNYHFTITKREIKKIADANGIATLKRGKNV*
Ga0049080_100338837	3300005582	Freshwater Lentic	MIIKLKQNSILKLTVEAQIKEALALRKGSVAGTKSLIDESNNYSFTVTKREIKRIADENGIETLKKGQNV*
Ga0049085_100185124	3300005583	Freshwater Lentic	MIIKLKQNSILKLTVETQVKEALALRKGSVAGTKSLIDESNNYSFTITKREIKRIADENGIATLKKGKNV*
Ga0070749_103792772	3300006802	Aqueous	MIIKLKNKSTLQITVETQVKEALALRKGSVGGTKSLIDESNNYHFTITKREIKRIADDNGIATIKRVEND*
Ga0075464_108027591	3300006805	Aqueous	MIIKLKHKSTLQITVETQVKEALKLRKGSVGGTKSLIDESNNYHFMITLKEIKKIADANGIATLKRGKNV*
Ga0075472_104282622	3300006917	Aqueous	MIIKLKQKSTLEITVETQVKEALKLRNGSVGGTKSLIDESQNYPFTITKREIKRIADANGIATLKRGKNE*
Ga0102828_10440345	3300007559	Estuarine	MIIKLKQKSTLKITVETQVKEALALRKGSVGGTKSLIDENNTYCFTITKREIKRIADENGIETLKKGQNG*
Ga0102828_10521661	3300007559	Estuarine	LEITVETQVKEALALRKGSVAGTKSLIDESNNYHFTVTKREIKRIADENGIETLKRGQNVH*
Ga0102828_11404461	3300007559	Estuarine	MIIKLKQNSTLEITVETQVKEALKLRNGSVGGTKSLIDESNNYHFTITKREIKRIADANGIATVKRGKNE*
Ga0102859_10847752	3300007708	Estuarine	MIIKLKHKSTLKITVETQVKEALTLRKGNVNSTKSLIDESNNYSFTVTKREIKRIADENGIETLKRGKNV*
Ga0102859_11092023	3300007708	Estuarine	MIIKLKEKSTLQITVETQVKEALKLRNGSVGGTKSLIDEDNNYHFRVTKRDIKRIADANGIATVKRGKNV*
Ga0102859_11119361	3300007708	Estuarine	MIIKLKQKSTLEITVETQVKEALALRKGSVAGTKSLIDESNNYHFTVTKREIKRIADENGIETLKKGQNG*
Ga0105090_107722532	3300009075	Freshwater Sediment	MIIKLKQKSTLEITVETQVKEALALRKGSIGGTKSLIDESNNYHFTITKREIKRIADANGITTLKRGKNG*
Ga0105098_106221111	3300009081	Freshwater Sediment	MIIKLKQKSTLQITVETQVKEALALRNGSVGGTKSLIDESNNYHFTITKREIKKIADANGIATVKRGKNV*
Ga0105099_102620471	3300009082	Freshwater Sediment	MIIKLKKDSTLQITVETQVKEALKLRNGSVSGTKSLIDESNNYHFTITKREIKRIADENGITTLKRGKNV*
Ga0105103_100209579	3300009085	Freshwater Sediment	MIIKLKHKSTLQITVETQVKEALKLRNGSVGGTKSLIDESNNYHFTITKREIKRIADANNIATIKRGKNV*
Ga0114968_100327708	3300009155	Freshwater Lake	MIIKLKKDSTLQITVETQVKEALALRKGSVGGTKSLIDESNNYHFTITKREIKKIADANGIATLKRGKND*
Ga0114970_1000343913	3300009163	Freshwater Lake	MIIKLKQNSILKLTVETQVKEALALRKGSVGGTKSLIDESNVYSFTITKREIKRIADENGIETLKRGQNVH*
Ga0114970_107585043	3300009163	Freshwater Lake	KKDSTLQITVETQVKEALALRKGSVGGTKSLIDESNNYHFTITKREIKKIADANGIATLKRGKND*
Ga0114969_101182792	3300009181	Freshwater Lake	MIIKLKKDSTLQITVETQVKEALKLRKGSIGGTKSLIDESNNYHFMITLKEIKKIADANGITTLKRGKND*
Ga0133913_105582241	3300010885	Freshwater Lake	MIIKLKKDSTLQITVKTQVKEALALRKGSVGGTKSLIDESNTYCFTITKREIKRIADENGITTVKRGKNV*
Ga0153801_10115495	3300012017	Freshwater	MIIKLKQKSTLEITVETQVKEALNLRNGSVGGTKSLIDESNNYHFTITKREIKRIADENGIATLKRGNNG*
Ga0153801_10219231	3300012017	Freshwater	MIIKLKQKSTLKITVEAQVKEALALRKGSVAGTKSLIDESNVYSFTVTKREIKRIADENGIETLKRGKNV*
Ga0153801_10653242	3300012017	Freshwater	MIIKLKQKSTLQITVETQVKEALKLRKGNVNSTKSLIDESNNYSFTITKREIKRIADENDIETLKRGNNG*
Ga0157208_100012768	3300012667	Freshwater	MIIKLKQKSTLQITVETQVKEAIKLRNGSVGGTKSLIDESNNYHFTITKREIKRIADANGIATIKRGKNV*
Ga0157208_100049295	3300012667	Freshwater	MIIKLKKDSTLQITVETQVKEALKLRNGSVGRTKSLIDESNNYHFTITKREIKKIADANNIATIKRGKNV*
Ga0157208_100286614	3300012667	Freshwater	MIIKLKQKSTLEITVETQVKEALKLRNGSVGGTKSLIDESNNYHFTITKREIKRIADAN
Ga0157208_100473892	3300012667	Freshwater	MIIKLKHKSTLEITVETQVKEALKLRNGSVGGTKSLIDESNNYHFTITKREIKRIADANGIATVKRGKNV*
Ga0177922_109089021	3300013372	Freshwater	ISSISTSITTNNMIIKLKQKSTLEITVETQVKEALNLRNGSVGGTKSLIDESNNYHFTITKREIKRIADENGIATLKRGNNG*
Ga0177922_112624993	3300013372	Freshwater	MIIKLKQNSILKLTVEAQIKEALALRKGSVAGTKSLIDESNNYSFTVTKREIKRIADENGIATLKKGKNV*
Ga0181364_10186071	3300017701	Freshwater Lake	MIIKLKHKSTLKITVETQVKEALALRKGSVAGTKSLIDESNNYSFTVTKREIKRIADENGIETLKSSP
Ga0181350_10805492	3300017716	Freshwater Lake	MIIKLKQKSTLEITVETQVKEALALRNGSVGGTKSLIDESNNYHFTITKREIKRIADANGIATLTRGKNG
Ga0181347_11482631	3300017722	Freshwater Lake	MIIKLKQKSTLEITVETQIKEALALRKGSVNGTKSLIDESNNYSFTITKREIKRIADEN
Ga0181365_10207412	3300017736	Freshwater Lake	MIIKLKKDSTLQITVETQVKEALALRKGSVGGTKSLIDESNNYHFTITKREIKKIADANGIATLKRGKNV
Ga0181365_10526131	3300017736	Freshwater Lake	MIIKLKQKSTLEITVETQIKEALALRKGSVNGTKSLIDESNNYSFTITKREIKRIADENGIATLKKGQNV
Ga0181365_11047013	3300017736	Freshwater Lake	MIIKLKQNSILKLTVEAQVKEALALRKGSVNGTKSLIDESNNYSFTITKREIKRIAD
Ga0181365_11116041	3300017736	Freshwater Lake	MIIKLKQNSILKLTVETQVKEALALRKGSVGGTKSLIDESNVYSFTITKREIKRIADENGIEPLKKGQNG
Ga0181352_11004453	3300017747	Freshwater Lake	MIIKLKHKSTLQITVETQVKEALKLRNGSVGGTKSLIDESNNYHFTITKREIKRIADANGIATLKRGKNV
Ga0181344_10060824	3300017754	Freshwater Lake	MIIKLKNKSTLEITVETQVKEALKLRNGSVGGTKSLIDESNNYHFTITLKEIKKIADANGIATLKRGKND
Ga0181344_10540856	3300017754	Freshwater Lake	MIIKLKHKSTLQITVETQVKEALALRNGSIGGTKSLIDESNNYHFTITLKEIKKIADASGIATIKRGKNV
Ga0181356_10147303	3300017761	Freshwater Lake	MIIKLKQKSTLEITVETQVKEALKLRNGSVGGTKSLIDESNNYHFTITKREIKRIADASGIATIKRGKND
Ga0181356_10966212	3300017761	Freshwater Lake	MIIKLKQKSTLEITVETQVKEALALRKGSVAGTKSLIDESNNYSFTVTKREIKRIADENGIETLKKGQNV
Ga0181356_11156651	3300017761	Freshwater Lake	MIIKLKHKSTLKITVETQVKEALALRKGSVAGTKSLIDESNNYSFTVTKREIKRIADENGIESLKRGQNG
Ga0181343_10627713	3300017766	Freshwater Lake	MIIKLKQKSTLEITVETQVKEALKLRNGSVGGTKSLIDESQNYHFTITKREIKKIADENGIATLKRGKNV
Ga0181343_11014473	3300017766	Freshwater Lake	MIIKLKQKTTLQITVETQVKEALKLRNGSVGGTKSLIDESNNYHFTITKREIKRIADASGIATIKRGKNV
Ga0181357_10687511	3300017777	Freshwater Lake	TVETQVKEALALRKGSVAGTKSLIDESNNYHFTITKREIKRIADENGIETLKKGQNV
Ga0181357_11224761	3300017777	Freshwater Lake	MIIKLKQKSTLEITVETQIKEALALRKGSVNGTKSLIDESNNYSFTITKREIKRIADENGIETLKKGQN
Ga0181357_11771343	3300017777	Freshwater Lake	MIIKLKHKSTLEITVETQVKEALALRKGSVGGTKSLIDESNNYHFTITKREIKRIADASGIATIKRGKNE
Ga0181357_12139991	3300017777	Freshwater Lake	LKLTVEAQIKEALALRKGSVAGTKSLIDESNNYSFTVTKREIKRIADENGIETLKRGQNV
Ga0181357_12780413	3300017777	Freshwater Lake	MIIKLKKDSPLKITVETQIKQALALRKGSVAGTKSLIDESNVYSFTVTKREIKRIADENG
Ga0181346_10636814	3300017780	Freshwater Lake	MIIKLKQNSILKITVETQVKEALALRKRSVNGTKSLIDESNNYSFTVTKREIKRIADENGIATLKKGQNV
Ga0181346_10883883	3300017780	Freshwater Lake	MIIKLKKDSTLQITVETQVKEALALRKGSVGGTKSLIDESNNYHFTITKREIKRIADENGIATVKRGKNV
Ga0181346_11031825	3300017780	Freshwater Lake	MIIKLKQNSILKLTVETQVKEALALRKGSVGGTKSLIDESNVYSFTITKREIKRIADENGIETLKKGQNG
Ga0181348_10875324	3300017784	Freshwater Lake	MIIKLKQNSILKLTVETQVKEALALRKGSVGGTKSLIDESNVYSFTVTKREIKRIADENGIETLKKGQNG
Ga0181355_11509183	3300017785	Freshwater Lake	MIIKLKQKSTLQITVETQVKEALKLRNGSVGGTKSLIDESNNYHFTITKREIKRIADENGIATVKRGKNV
Ga0181355_11995382	3300017785	Freshwater Lake	MIIKLKQKSTLEITVETQVKEALKLRNGSVGGTKSLIDESNNYHFTITKREIKRIADENNIATVKRGKNV
Ga0181355_12622471	3300017785	Freshwater Lake	MIIKLKQNSILKLTVETQVKEALALRKGSVAGTKSLIDESNNYHFTITKREIKRIADENGIETLKKGQNV
Ga0181355_13136793	3300017785	Freshwater Lake	MIIKLKHKSTLEITVETQVKEALALRKGSVGGTKSLIDESNNYSFTITKREIKRIADENGIETLKKGQ
Ga0181355_13292571	3300017785	Freshwater Lake	MIIKLKQNSILKLTVEAQVKEALALRKGSVNGTKSLIDESNNYSFTITKREIKRIADENGIETLKRGQNV
Ga0181355_13381221	3300017785	Freshwater Lake	MIIKLKHKSTLQITVETQVKEALALRNGSVGGTKSLIDESNNYHFTITKREIKKIADANGIATLKRGQN
Ga0181359_100768210	3300019784	Freshwater Lake	MIIKLKQNSILKLTVEAQVKEALALRKGSVNGTKSLIDESNNYSFTITKREIKRIADENGIETLKKGQNG
Ga0181359_10294429	3300019784	Freshwater Lake	MIIKLKHKSTLKITVETQVKEALALRKGSVAGTKSLIDESNNYSFTVTKREIKRIADENGIETLKRGQNG
Ga0181359_10459475	3300019784	Freshwater Lake	MIIKLKQKSTLEITVETQVKEALKLRNGSVGGTKSLIDESNNYHFTITKREIKRIADENGIATVKRGKNV
Ga0181359_10690237	3300019784	Freshwater Lake	MIIKLKQNSILKLTVEAQIKEALALRKGSVNGTKSLIDESNNYSFTITKREIKRIAS
Ga0181359_10913064	3300019784	Freshwater Lake	MIIKLKQNSILKLTVEAQIKEALALRKGSVAGTKSLIDESNNYSFTVTKREIKRIADENGIETLKKGQNV
Ga0181359_10916252	3300019784	Freshwater Lake	MIIKLKQKSTLEITVETQIKEALALRKGSVNGTKSLIDESNVYSFTVTKREIKRIADENGIATLKKGKNV
Ga0181359_11272401	3300019784	Freshwater Lake	MIIKLKQNSILKLTVEAQIKEALALRKGSVAGTKSLIDESNNYSFTVTKREIKRIADENGIATLKRGQNG
Ga0181359_12604961	3300019784	Freshwater Lake	TVEAQIKEALALRKGSVAGTKSLIDESNNYSFTVTKREIKRIADENGIATLKRGQNV
Ga0207193_16567392	3300020048	Freshwater Lake Sediment	MIIKLKQKSTLQITVETQVKEALKLRNGSVGGTKSLIDESNNYHFTITKREIKRIADASGIATVKRGKNV
Ga0207934_10817863	3300020561	Freshwater	MIIKLKQKSTLQITVETQVKEALALRKGSIGGTKSLIDESNNYHFTITKREIKKIADANGIATVKRGKNV
Ga0222713_103089151	3300021962	Estuarine Water	NKSTLEITVETQVKEALALRKGSIGGTKSLIDESNNYHFTITKREIKKIADANGIATIKRGKNV
Ga0222712_1000485212	3300021963	Estuarine Water	MIIKLKNKSTLEITVETQVKEALALRKGSIGGTKSLIDESNNYHFTITKREIKKIADANGIATIKRGKNV
Ga0181354_12223181	3300022190	Freshwater Lake	MIIKLKQNSILKLTVEAQIKEALALRKGSVNGTKSLIDESNNYSFTITKREIKRIADENGIETLKRGQNV
Ga0181354_12464101	3300022190	Freshwater Lake	MIIKLKQKSTLEITVETQVKEALALRKGSVNGTKSLIDESNNYSFTVTKREIKRIADENGIATLKKGKNV
Ga0181351_12771521	3300022407	Freshwater Lake	MIIKLKHKSTLEITVETQVKEALKLRNGSVGGTKSLIDESNNYHFTITKREIKRIADENGIATVKRGKNV
Ga0244775_103799741	3300024346	Estuarine	LEITVETQVKEALALRKGSVAGTKSLIDESNNYHFTVTKREIKRIADENGIETLKRGQNV
Ga0244776_104049642	3300024348	Estuarine	MIIKLKHKSTLKITVETQVKEALTLRKGNVNSTKSLIDESNNYSFTVTKREIKRIADENGIETLKRGKNV
Ga0208800_10125171	3300027193	Estuarine	MIIKLKEKSTLQITVETQVKEALKLRNGSVGGTKSLIDESNNYHFTITKREIKKIADANGIATIYFCKKINSL
Ga0208800_10236714	3300027193	Estuarine	ITVETQVKEALALRKGSVAGTKSLIDESNNYHFTVTKREIKRIADENGIETLKRGQNVH
Ga0208942_10522863	3300027627	Freshwater Lentic	MIIKLKQNSILKLTVETQVKEALALRKGSVAGTKSLIDESNNYSFTITKREIKRIADENGIATLKKGKNV
Ga0209443_11864882	3300027707	Freshwater Lake	MIIKLKQKSTLEITVETQVKEALALRKGSVNGTKSLIDESNNYSFTVTKREIKRIADENGIATLKKGQNV
Ga0209443_11912953	3300027707	Freshwater Lake	MIIKLKKDSPLKITVETQIKQALALRKGSVAGTKSLIDESNVYSFTVTKREIKRIADENGIATLKKGKNV
Ga0209190_10226208	3300027736	Freshwater Lake	MIIKLKQNSILKLTVETQVKEALALRKGSVGGTKSLIDESNVYSFTITKREIKRIADENGIETLKRGQNVH
Ga0209596_100148418	3300027754	Freshwater Lake	MIIKLKKDSTLQITVETQVKEALALRKGSVGGTKSLIDESNNYHFTITKREIKKIADANGIATLKRGKND
Ga0209596_10713211	3300027754	Freshwater Lake	MIIKLKKDSTLQITVETQVKEALKLRKGSIGGTKSLIDESNNYHFMITLKEIKKIADANGITTLKRGKND
Ga0209246_100470486	3300027785	Freshwater Lake	MIIKLKQKSTLEITVETQIKEALALRKGSVNGTKSLIDESNNYSFTITKREIKRIADENG
Ga0209353_103995121	3300027798	Freshwater Lake	MIIKLKQKSTLEITVETQVKEALALRKGSVAGTKSLIDESNNYHFTITKREIKRIADENGIETLKKGQNV
Ga0209354_100518356	3300027808	Freshwater Lake	MIIKLKQNSILKLTVETQVKEALALRKGSVGGTKSLIDESNVYSFTITKREIKRIADENGIETLKRGQNV
Ga0209354_100728552	3300027808	Freshwater Lake	MIIKLKQKSTLEITVETQIKEALALRKGSVNGTKSLIDESNNYSFTITKREIKRIADENGIETLKKGQNG
Ga0209354_103041312	3300027808	Freshwater Lake	MIIKLKQNSILKLTVEAQIKEALALRKGSVAGTKSLIDESNNYSFTVTKREIKRIADENGIETLKRGQNG
Ga0209550_102717374	3300027892	Freshwater Lake	MIIKLKQNSILKLTVEAQIKEALALRKGSVAGTKSLIDESNNYSFTVTKREIKRIADENGIATLKRGQNV
Ga0209668_101110774	3300027899	Freshwater Lake Sediment	MIIKLKNKSTLQITVETQVKEALKLRNGSVGGTKSLIDESNNYHFTITKREIKRIADANGIATVKRGKNV
Ga0209079_100103459	3300027972	Freshwater Sediment	MIIKLKHKSTLQITVETQVKEALKLRNGSVGGTKSLIDESNNYHFTITKREIKRIADANNIATIKRGKNV
Ga0209079_103218202	3300027972	Freshwater Sediment	MIIKLKQKSTLEITVETQVKEALALRKGSIGGTKSLIDESNNYHFTITKREIKRIADANGITTLKRGKNG
Ga0247723_10145472	3300028025	Deep Subsurface Sediment	MIIKLKQKSTLEITVETQVKEALKLRNGSVGGTKSLIDESNNYHFAITKREIKRIADANGIATIKRGKNG
Ga0315272_101431253	3300032018	Sediment	MIIKLKHKSTLQITVETQVKEALKLRKGSIGGTKSLIDESNNYHFTITKREIKRIADANGIATLKKGQNV
Ga0334979_0676273_12_224	3300033996	Freshwater	MIIKLKHKSTLQITVETQVKEALALRNGSIGGTKSLIDESNNYHFTITKREIKRIADANGIATIKRGKNV
Ga0335037_0039458_1302_1514	3300034107	Freshwater	MIIKLKQKSTLQITVETQVKEALKLRNGSVGGTKSLIDESNNYHFTITKREIKRIADANNIATVKRGKNE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F100700

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences