Basic Information | |
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Family ID | F100693 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 102 |
Average Sequence Length | 42 residues |
Representative Sequence | YKRGTLHAGINPKGPKKAPLAKSRKQAIAIALSEAGKSKKK |
Number of Associated Samples | 90 |
Number of Associated Scaffolds | 102 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 3.92 % |
% of genes near scaffold ends (potentially truncated) | 87.25 % |
% of genes from short scaffolds (< 2000 bps) | 84.31 % |
Associated GOLD sequencing projects | 86 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.37 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (45.098 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous (13.725 % of family members) |
Environment Ontology (ENVO) | Unclassified (37.255 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Water (non-saline) (42.157 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60 |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 24.64% β-sheet: 0.00% Coil/Unstructured: 75.36% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.37 |
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Visualization |
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All Organisms Unclassified |
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Visualization |
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Freshwater Sediment Freshwater Lake Freshwater Lake Freshwater Lentic Freshwater And Sediment Freshwater And Sediment Freshwater Lake Sediment Freshwater Freshwater, Plankton Freshwater Lake Freshwater Lake Freshwater Sediment Freshwater And Marine Surface Water Freshwater Freshwater Pond Fresh Water Aqueous Freshwater To Marine Saline Gradient Estuary Water Estuarine Wetlands Benthic Estuarine Estuarine Water Hypersaline Lake Sediment Soil Deep Subsurface Estuary |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
FwDRAFT_100119675 | 3300000882 | Freshwater And Marine | MGEYKAGTLHAGRNPKGPKKAPMAKSRKQAIAIAMSESGMKKRK* |
ML8_100267762 | 3300001335 | Wetlands Benthic | MREYKAGKLKAGVNPKGPKKAPMAKSRRQAVAIALRSAGVPKKKK* |
metazooDRAFT_12757042 | 3300002202 | Lake | MREFKSGKLHGGVNPKGPKKAPVVKSKRQALAIALSQAGVKKK* |
B570J40625_1008411191 | 3300002835 | Freshwater | MGEYKKGTLHAGVNPKGPAKAPLAKSRKQAIAIAMSEAGKSKKK* |
Ga0070374_100482371 | 3300005517 | Freshwater Lake | EYKRGTLHSGKNPKGPKKAPLVKSRKQAVAIALSEAGKSRGKKR* |
Ga0075470_100805481 | 3300006030 | Aqueous | MGEFKRGTLHAGVNPKGPAKAPLAKSRKQAIAIALSEAGKSKKK* |
Ga0070749_105010461 | 3300006802 | Aqueous | KRGTLHAGINPKGPKKAPMAKSRKQAIAIALSEAGKSKKRS* |
Ga0070749_105537252 | 3300006802 | Aqueous | HSGINPKGPKKAPLAKSRKQALAIAISVTRKKKK* |
Ga0075464_110410752 | 3300006805 | Aqueous | HSGKDPKGPKKAPVVKNRKQAITIALSSAGMSKKKAKKK* |
Ga0102978_10031171 | 3300007177 | Freshwater Lake | VMGEFKRGTLHAGKDPKGPKKAKIVKSKKQAIAIALSQAGKAKKK* |
Ga0075460_101402211 | 3300007234 | Aqueous | LHAGVDPKGPKKAPVVKSRNQAIAIALSQAGKAKKK* |
Ga0075458_101900322 | 3300007363 | Aqueous | MGEYKRGTLHAGINPKGPAKAPMAKSRKQAIAIALSEAGMSKKKKK* |
Ga0099847_10977441 | 3300007540 | Aqueous | KAGTLHGGIDPKGKKKAPVVKSRKQAIAIALSQAGVAKKKKGH* |
Ga0099846_11389583 | 3300007542 | Aqueous | VDPDGKGPKKAPVVKSQKQAIAIALRQAGAPPKGKKK* |
Ga0102861_10559093 | 3300007544 | Estuarine | AGVNPKGPAKAPLAKSRKQAIAIALSEAGKSKKK* |
Ga0105746_12839863 | 3300007973 | Estuary Water | TLNAGKDPKGPKKAAVVKNRKQAIAIALSQAGKAKKRAK* |
Ga0105748_101556535 | 3300007992 | Estuary Water | GTLNAGKDPKGPKKAPVVKNRKQAIAIALSQAGKAKKRAK* |
Ga0108970_101232371 | 3300008055 | Estuary | YKRGKLHAGVNPKGPAKAPMAKSRKQAIAIALSEAGKSKKK* |
Ga0114340_11903702 | 3300008107 | Freshwater, Plankton | MKEYKAGTLHAGKNPKGPKKAKIVRSKKQAIAIALSEAGKAKKK* |
Ga0114351_10333496 | 3300008117 | Freshwater, Plankton | KVLGEYKRGTLHSGKDPKGPKKAPVVKNRRQAIAIALSSAGKAKKK* |
Ga0114841_10887674 | 3300008259 | Freshwater, Plankton | KAGKLKAGINPKGPKKAPMAKSRKQAVAIALSQAGMSKKK* |
Ga0114363_10906541 | 3300008266 | Freshwater, Plankton | HSGKDPKGPKKAPVVKSRKQAIAIALSEAGKAKKK* |
Ga0114876_11492773 | 3300008448 | Freshwater Lake | YKSGKLHAGINPKGPKKAPMAKNRSQALAIALRSAGVAKKKK* |
Ga0105102_108043121 | 3300009165 | Freshwater Sediment | GKLKAGIDPKGPKKAPLAKSRAQAVAIALRSAGVKKKK* |
Ga0105104_101738965 | 3300009168 | Freshwater Sediment | AKVMGEYKRGTLHAGINPKGPKKAPMAKSRSQAVAIAMSESGMKRKGK* |
Ga0105104_106222722 | 3300009168 | Freshwater Sediment | EYKRGTLKAGINPKGPKKAPMAKSRKQAVAIAMSQAGMKKKK* |
Ga0105097_101875311 | 3300009169 | Freshwater Sediment | FKRGTLHAGVNPKGPAKAPLAKSRKQAIAIALSEAGKSKKK* |
Ga0114979_104917221 | 3300009180 | Freshwater Lake | HKVMGEYKDKSLHSGKDGKVVKNRKQAIAIALSESGAAKKKK* |
Ga0136655_11017103 | 3300010316 | Freshwater To Marine Saline Gradient | AGVDPDGKGPKKAPVVKSQKQAIAIALRQAGAPPKGKKK* |
Ga0136644_104893391 | 3300010334 | Freshwater Lake | LHAGVNPKGPKKAPIVKSRKQAVAIALSQAGISKRK* |
Ga0129333_107518661 | 3300010354 | Freshwater To Marine Saline Gradient | YKAGTLHSGVDPKGPKKAPIVKSRKQAIAIALSEAGKAKKK* |
Ga0129336_102681252 | 3300010370 | Freshwater To Marine Saline Gradient | GKLHAGVNPKGPKKAPLAKSRKQAIAIALSEAGMSKKK* |
Ga0136551_10000431 | 3300010388 | Pond Fresh Water | MGEYKRGTLHAGVNPKGPAKAPMAKSRKQAIAIALSEAGKSKKK* |
Ga0133913_128889683 | 3300010885 | Freshwater Lake | GKVMKEYGAGKLHGGINPKGPKKAPIVKNRKQAVAIAMSMAGMKKKKSK* |
Ga0137675_10223551 | 3300010966 | Pond Fresh Water | RGTLHAGVNPKGPAKAPLAKSRKQAIAIALSEAGKSKKK* |
Ga0138284_12912711 | 3300012779 | Freshwater Lake | SGTLHAGRNPKGPKKAPIVKSRKQAIAISLSMAGMQKKNRQK* |
Ga0164292_104346151 | 3300013005 | Freshwater | EYKRGTLHAGVNPKGPAKAPLAKSRKQAIAIALSEAGKSKKK* |
Ga0129327_103707731 | 3300013010 | Freshwater To Marine Saline Gradient | GGIDPKGKKKAPVVKSRKQAIAIALSQAGVAKKKKGH* |
Ga0170791_135326931 | 3300013295 | Freshwater | GRNPKGPKKAPIVKSRKQAIAISLSMAGMQKKNRQK* |
Ga0177922_103450531 | 3300013372 | Freshwater | GEYKAGTLHAGVNPKGPKKAPLAKSRKQAVAIALSQAGMTKRK* |
Ga0134315_10211521 | 3300014962 | Surface Water | AGVDPKGPKKAPMAKSRKQAIAIAMRSAGMPKKKK* |
Ga0181363_10597401 | 3300017707 | Freshwater Lake | LHGGVDPKGPKKAPIVKSRKQAIAIAMSEAGMSKKKK |
Ga0181347_11867303 | 3300017722 | Freshwater Lake | YKRGTLHSGKDPKGPKKAPLVKSRKQAVAIALSEAGKSRGKKR |
Ga0181356_12414111 | 3300017761 | Freshwater Lake | QAKIAKVLGEFKDKKLHSGVDPKGPKKARVVKSRKQTIAIALSEAGKLKGKK |
Ga0181343_11395174 | 3300017766 | Freshwater Lake | AGINPKGPKKAPLAKSRKQAVAIALSQAGMSKKKK |
Ga0181357_10213098 | 3300017777 | Freshwater Lake | EYKRGTLHGGIDPKGPKKAPVVTSRKQAVAIALSQAGKAKKGKM |
Ga0181357_12765461 | 3300017777 | Freshwater Lake | VLGEFKDKKLHSGIDPKGPKKARVVKSRKQAIAIALSEAGKLRGKK |
Ga0181357_12826181 | 3300017777 | Freshwater Lake | EFKTGKLHGGIDPKGPKKAMLVKNPKQAIAIALVQAAAMKKKKGK |
Ga0181355_13173133 | 3300017785 | Freshwater Lake | KRGTLHGGIDPKGPKKAPVVKSRKQAIAIALSEAGKSRKTK |
Ga0181355_13235233 | 3300017785 | Freshwater Lake | KRGTLHSGKDPKGPKKAAVVKNRKQAVAIALSVAGKSKKKGK |
Ga0180433_110759573 | 3300018080 | Hypersaline Lake Sediment | LRAGKDPKGPKKAPKAKSRKQAIAIALSEAGMSKPEKRAKGG |
Ga0211726_106644064 | 3300020161 | Freshwater | HAGRDPKGPKKAPVVKSRKQAIAIALSEAGKSKKK |
Ga0211726_109113483 | 3300020161 | Freshwater | YKRGTLHAGINPKGPKKAPLAKSRKQAIAIALSEAGKSKKK |
Ga0211731_109254694 | 3300020205 | Freshwater | AKVMGEYKAGTLHAGVNPKGPRKAPLAKSRAQATAIAMSQAGMSKRK |
Ga0210339_14087241 | 3300021332 | Estuarine | VMGEFKRGTLHAGVNPKGPAKAPLAKSRKQAIAIALSEAGKSKKK |
Ga0222712_106186383 | 3300021963 | Estuarine Water | MGEYKRGTLHAGVNPKGPKKAPLAKSRKQALAIAMSEAGMKKKK |
Ga0196903_10300454 | 3300022169 | Aqueous | HGGIDPKGPKKAPLVKNPKQAIAIALSQANAKKKKK |
Ga0181354_11850902 | 3300022190 | Freshwater Lake | GTLHAGVNPKGPKKAPLAKNRKQAVAIAMSEAGIKKRK |
Ga0214923_100088212 | 3300023179 | Freshwater | MSEFKKGTLHAGKDPDGKGPKKAPIVKSRKQAIAIALSEQAKSKPKGGKK |
Ga0244777_1000032543 | 3300024343 | Estuarine | MGEYKSGTLHAGRNPKGSKKAPLAQSRKQAIAIAMSAMGMKKK |
Ga0244775_112501603 | 3300024346 | Estuarine | TLSAGMNPKGPKKAPMAKSRKQAVAIAMSEAGMAKKGKKK |
Ga0255171_10312373 | 3300024354 | Freshwater | KLHAGVDPKGPKKAPMAKSRKQAIAIALSEAGKSKKK |
Ga0208147_10409445 | 3300025635 | Aqueous | KAGTLHSGKDPKGPKKAPVVKSRKQAIAIALSSAGMAKKKKK |
Ga0208147_11222973 | 3300025635 | Aqueous | EFKMGTLHGGRNPKGPKKAPIVKSRKQAIAIALSEAGKSRKRR |
Ga0208784_10529011 | 3300025732 | Aqueous | KGTLHGGINPKGPKKAPVVKSQKQAIAIALSSAGISKKKGKK |
Ga0208644_11213733 | 3300025889 | Aqueous | VMHEWKTGKLHAGVDPDGKGPKKAPVVKSQKQAIAIALRQAGAPPKGKKK |
Ga0208644_12875603 | 3300025889 | Aqueous | TLHAGRDPKGPKKAPIVKSRKQAIAIALSEAGKARKK |
Ga0208177_10684273 | 3300027254 | Estuarine | VSKVMGEYKSGTLHAGRNPKGPKKAPLARSRKQAIAIAMSEAGMKKRK |
Ga0208974_11750512 | 3300027608 | Freshwater Lentic | KMSKVMGEYKMGTLKAGVNPKGPAKAPMAKSRKQAVAIAMSEAGKMKRK |
Ga0209599_100074031 | 3300027710 | Deep Subsurface | FKAGELHAGKDPKGPKKAPIVKNRKQAIAIALSEAGASKGKKK |
Ga0209492_10755751 | 3300027721 | Freshwater Sediment | EYKAGTLHAGVNPKGPKKAPLAKNRKQAVAIAMSEAGIKKRK |
Ga0209296_12506174 | 3300027759 | Freshwater Lake | EYKRGTLKAGVNPKGPKKAPMAKSRKQAVAIAMSQAGMSKKK |
Ga0209770_100841661 | 3300027769 | Freshwater Lake | LHAGVNPKGPKKAPMAKSRKQAIAIAMSEAGMKRKK |
Ga0209107_103146653 | 3300027797 | Freshwater And Sediment | MGEYKRGTLHAGINPKGPKKAPLAKSRAQAVAIAMSEAGMKKKKK |
Ga0209229_105034342 | 3300027805 | Freshwater And Sediment | SGVDPKGPKKARIVKSRKQAIAIALSEAGKSIKKVKGK |
Ga0209985_101821191 | 3300027806 | Freshwater Lake | SGKNPKGPKKAPIVKNRKQAVAIALSQAGMSKKKKKK |
Ga0209354_103607231 | 3300027808 | Freshwater Lake | GTLNAGVNPKGPAKAKKAGSREQAIAIALSEAGMSKKKK |
Ga0209253_106161621 | 3300027900 | Freshwater Lake Sediment | MGEYKRGTLHAGINPKGPKKAPLAKSRKQAVAIALSVAGKSKKK |
Ga0209820_11613314 | 3300027956 | Freshwater Sediment | LHAGINPKGPKKAPMAKSRAQAVAIAMSESGMKRKGK |
Ga0209298_101157385 | 3300027973 | Freshwater Lake | EYKAGTLHGGVNPKGPKKAPIVKSRKQAIAIALSEAGKSIKKAKGK |
Ga0255180_10027255 | 3300028073 | Freshwater | GEYKRGTLHAGVNPKGPKKAPMAGSRKQAIAIAMSEAGKMKKK |
Ga0238435_1065981 | 3300029349 | Freshwater | MKEYKAGTLHSGVDPKGPKKAKVVTSRNQAIAIALSEANKSKKKAKGK |
Ga0307375_107942811 | 3300031669 | Soil | AKVMGEYKRGTLHAGINPKGPKKAPLAKSRAQAVAIAMSEAGMKKKKK |
Ga0307377_103686133 | 3300031673 | Soil | RGTLHAGVNPKGPAKAPLAKSRKQAIAIALSEAGMSKKMKKK |
Ga0315907_100542022 | 3300031758 | Freshwater | MKEYKAGTLHAGKNPKGPKKAKIVRSKKQAIAIALSEAGKAKKK |
Ga0315907_101261005 | 3300031758 | Freshwater | GKLKAGINPKGPKKAPMAKSRKQAVAIALSQAGMSKKK |
Ga0315909_103645455 | 3300031857 | Freshwater | TLHSGKDPKGPKKAPVVKNRKQAIAIALSSAGMSKKKAKKK |
Ga0315904_109744663 | 3300031951 | Freshwater | LHGGVDPAGPKKAPVVKSRKQAIAIALSQAGKARKK |
Ga0315901_102096081 | 3300031963 | Freshwater | KLKAGINPKGPKKAPMAKSRKQAVAIALSQAGMSKKK |
Ga0315901_102673203 | 3300031963 | Freshwater | MGEYKAGTLHAGVNPKGPKKAPLAKSRKQAVAIALSQAGMTKRK |
Ga0315901_107890621 | 3300031963 | Freshwater | GTLHGGVDPAGPKKAPVVKSRKQAIAIALSQAGKARKK |
Ga0315901_108405121 | 3300031963 | Freshwater | LHAGRDPKGPKKAPVVKNRKQAVAIALSQAGMAKKRGKKK |
Ga0315274_114415573 | 3300031999 | Sediment | TLHSGQDPKGPRKAPVVKSRKQAVAIAMSQAGMSKKRK |
Ga0315906_104458844 | 3300032050 | Freshwater | KVMGEFKRGTLHAGIDPKGPKKAKIVKNKKQAIAIALSQAGKAKKK |
Ga0315284_120393392 | 3300032053 | Sediment | GKIMSEFKAGVLHSGINPKGPKKAPLAKSRKQAIAIALSVTGKAKKTTKKK |
Ga0334982_0501830_406_534 | 3300033981 | Freshwater | KEGKLHSGKDPKGPKKAPKVKSSKQAIAIALSEAGVAKKKGK |
Ga0334986_0121731_14_151 | 3300034012 | Freshwater | MKEFKSGTLHSGKNPKGPKKAKVVTNRKQAIAIAMSEAGMKRKKK |
Ga0334985_0779218_372_506 | 3300034018 | Freshwater | MGEFKRGTLHAGVNPKGPAKAPLAKSRKQAIAIALSEAGKSKKK |
Ga0334987_0672071_469_597 | 3300034061 | Freshwater | KSGTLHSGKDPKGPKKAPVVKSKKQAVAIAMSEAGMSKKGKK |
Ga0334995_0581376_505_639 | 3300034062 | Freshwater | MGEYKRGTLHGGVDPAGPKKAPVVKSRKQAIAIALSQAGKAKKK |
Ga0335010_0039631_3330_3470 | 3300034092 | Freshwater | MGEFKRGTLHSGKDPKGPKKAAVVKNRKQAVAIALSVAGKSKKKGK |
Ga0335033_0160978_1118_1240 | 3300034117 | Freshwater | KRGTLHAGVNPKGPAKAPLAKSRKQAIAIALSEAGKSKKK |
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